mRNA_H-canaliculatus_F_contig1534.3959.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1534.3959.1
Unique NamemRNA_H-canaliculatus_F_contig1534.3959.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1534.3959.1 vs. uniprot
Match: A0A6H5L3X7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3X7_9PHAE)

HSP 1 Score: 354 bits (908), Expect = 1.250e-115
Identity = 211/255 (82.75%), Postives = 226/255 (88.63%), Query Frame = 1 
Query:  133 PDRSPTG-RGGGYGLDAELAARREANYDYXXXAEAQEWIEDVTGEAFASGFAEELKDGRRLCLLINVIKPGAVRRVNNSKMPFKQMENVSNFLKACRAVGVAEHSLFETVDLFEGKDVGLVVRCLHALGQTVQKSCPDYNGPRLGVRQTEANKREWTPEQQXXXXQLHSSGAMSQLMAGSSKTMERGSVIKTGVTFGATQSGTGDPAAISGWAXXXXXXXXXXXXXXXXXXXXXXXXXASGDASGASSRLTAGHR 894
            P RSPTG RGGGYGLDAELAARREANYD XXX  AQEWIEDVTGE FA GF EELKDGR+LCLLIN IKPGAVRRVN+S+MPFKQMENVSNFLKACRAVGVAEHSLFETVDL+EGKD+GLVVRCLHALGQTVQ SCP+YNGPRLG++QTEANKREWT EQQ    + +SSGAMS L+AGSSKTMER +++KTG TFGA QSGTGD A  SGW  XXXXXXXXXXXXXXXXXXXXXX  ASGD +GASSR TAGHR
Sbjct:  334 PRRSPTGGRGGGYGLDAELAARREANYDXXXXXXAQEWIEDVTGERFAEGFGEELKDGRKLCLLINQIKPGAVRRVNDSRMPFKQMENVSNFLKACRAVGVAEHSLFETVDLYEGKDLGLVVRCLHALGQTVQNSCPEYNGPRLGIKQTEANKREWTEEQQQQQLR-NSSGAMSNLLAGSSKTMERATILKTGATFGAAQSGTGDRAGTSGWTMXXXXXXXXXXXXXXXXXXXXXXAGASGDKTGASSRFTAGHR 587
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BLAST of mRNA_H-canaliculatus_F_contig1534.3959.1 vs. uniprot
Match: D7FNP0_ECTSI (Calponin-homology (CH) domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNP0_ECTSI)

HSP 1 Score: 254 bits (650), Expect = 9.960e-81
Identity = 167/277 (60.29%), Postives = 187/277 (67.51%), Query Frame = 1 
Query:  190 ARREANYDYXXXAEAQEWIEDVTGEAFASGFAEELKDGRRLCLLINVIKPGAVRRVNNSK--MPFKQMENVSNFLKACRAVGVAEHSLFETVDLFEGKDVGLVVRCL----------------------------------------HALGQTVQKSCPDYNGPRLGVRQTEANKREWTPEQQXXXXQLHSSGAMSQLMAGSSKTMERGSVIKTGVTFGATQSGTGDPAAISGWAXXXXXXXXXXXXXXXXXXXXXXXXXASGDASGASSRLTAGHR 894
            A   A Y     AEAQ W+E VTGE     FA+ L+DG RLC L+N IKP +VRRVN  K    FKQMEN+SNF++ CRA+GV E+SLFETVDL+EGKDVGLVV+CL                                        HALGQTVQ SCP+YNGPRLG++QTEANKREWT EQQ    + +SSGAMS L+AGSSKTMER +VIKTG TFGA QSGTGD A  SGW  XXXXXXXXXXXXXXXXXXXXX   ASGD +GASSR TAGHR
Sbjct:    7 AESSAGYGGDLQAEAQAWVEQVTGEPLEGDFADGLRDGVRLCKLLNTIKPSSVRRVNPFKEGQKFKQMENISNFIRGCRAIGVPEYSLFETVDLYEGKDVGLVVKCLMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHALGQTVQNSCPEYNGPRLGIKQTEANKREWTEEQQQQQLR-NSSGAMSNLLAGSSKTMERATVIKTGATFGAAQSGTGDRAGTSGWTMXXXXXXXXXXXXXXXXXXXXXYAGASGDKTGASSRFTAGHR 282
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BLAST of mRNA_H-canaliculatus_F_contig1534.3959.1 vs. uniprot
Match: A0A835ZHQ8_9STRA (Calponin homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHQ8_9STRA)

HSP 1 Score: 231 bits (590), Expect = 6.910e-72
Identity = 119/202 (58.91%), Postives = 144/202 (71.29%), Query Frame = 1 
Query:  151 GRGGGYGLDAELAARREANYDYXXXAEAQEWIEDVTGEAFASGFAEELKDGRRLCLLINVIKPGAVRRVNNSKMPFKQMENVSNFLKACRAVGVAEHSLFETVDLFEGKDVGLVVRCLHALGQTVQKSCPDYNGPRLGVRQTEANKREWTPEQQXXXXQLHSSGAMSQLMAGSSKTMERGSVIKTGVTFGATQSGTGDPAAI 756
            GRGGGYGLDAELA +  A YD+     AQEW+E VTG  F   FA  LKDG  LC LIN IKPG ++R+N+SKMPFKQMEN+SNFLKACR +GVAE+SLFETVDLFE KDVGLV+RCL ALG  VQ S P++ GP LG +   ANKRE+T EQ     Q      M++ M GS+  MER  ++KTG+T GA  +G GD +++
Sbjct:    3 GRGGGYGLDAELALKAAAKYDFEGERTAQEWMEAVTGVKFEGSFASSLKDGTLLCQLINAIKPGTIKRINSSKMPFKQMENISNFLKACRTLGVAEYSLFETVDLFEEKDVGLVIRCLFALGSAVQSSTPEFAGPHLGAKPHTANKREFTAEQMR---QARLDTTMTKAMQGSAAVMERLPIVKTGITAGAEYAGIGDTSSM 201
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BLAST of mRNA_H-canaliculatus_F_contig1534.3959.1 vs. uniprot
Match: D7FJ16_ECTSI (Calponin-homology (CH) domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ16_ECTSI)

HSP 1 Score: 228 bits (580), Expect = 1.480e-69
Identity = 113/201 (56.22%), Postives = 145/201 (72.14%), Query Frame = 1 
Query:  154 RGGGYGLDAELAARREANYDYXXXAEAQEWIEDVTGEAFASGFAEELKDGRRLCLLINVIKPGAVRRVNNSKMPFKQMENVSNFLKACRAVGVAEHSLFETVDLFEGKDVGLVVRCLHALGQTVQKSCPDYNGPRLGVRQTEANKREWTPEQQXXXXQLHSSGAMSQLMAGSSKTMERGSVIKTGVTFGATQSGTGDPAAI 756
            RG GYGLDAELA +REA YD+    +A+ WIE VTGE     F + L+DG  +C L+N IKPGAVR++N S+MPFKQMEN+SNFLK+CRA+GVAEHSLFETVDL+EGKD+GLVVRC+ ALG  VQ +CP+Y GP LG +  + NKR +  EQ+    Q   + + S+L  GS+ +MER  + K G+ FGA  +GTGD   +
Sbjct:    7 RGAGYGLDAELARQREAKYDHSAEDQARAWIEAVTGERVVGPFGDALRDGVVICKLVNTIKPGAVRKINESRMPFKQMENISNFLKSCRAMGVAEHSLFETVDLYEGKDIGLVVRCIFALGSAVQGTCPEYTGPTLGAKPHQENKRIFNEEQKQ---QAKVNASFSKLGMGSAHSMERSQISKPGICFGAENAGTGDTTTV 204
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BLAST of mRNA_H-canaliculatus_F_contig1534.3959.1 vs. uniprot
Match: A0A836CGB8_9STRA (Calponin homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGB8_9STRA)

HSP 1 Score: 219 bits (558), Expect = 1.350e-67
Identity = 113/201 (56.22%), Postives = 140/201 (69.65%), Query Frame = 1 
Query:  154 RGGGYGLDAELAARREANYDYXXXAEAQEWIEDVTGEAFASGFAEELKDGRRLCLLINVIKPGAVRRVNNSKMPFKQMENVSNFLKACRAVGVAEHSLFETVDLFEGKDVGLVVRCLHALGQTVQKSCPDYNGPRLGVRQTEANKREWTPEQQXXXXQLHSSGAMSQLMAGSSKTMERGSVIKTGVTFGATQSGTGDPAAI 756
            RGGGYGLDAELA +  ANYDY     AQEWIE VT   F   FA  LKDG  LC L+N I+PG V+++N S MPFKQMEN+S +LK CRA+GVAEHSLFETVDL+E KD+ LV++CL ALG T+Q S P+++GP LG +   ANKRE+T EQ     +    GA+++   GS+  MER  V K G+T GA  +GTGD  +I
Sbjct:    5 RGGGYGLDAELARKAAANYDYAGEHAAQEWIEAVTRVKFEGTFAAALKDGSVLCKLLNAIRPGTVKKINTSSMPFKQMENISAYLKGCRALGVAEHSLFETVDLYEEKDISLVIKCLFALGSTIQSSVPEFHGPHLGAKMHTANKREFTAEQMA---KARLGGAITKQTQGSAAVMERLHVTKGGITMGAEYAGTGDSGSI 202
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BLAST of mRNA_H-canaliculatus_F_contig1534.3959.1 vs. uniprot
Match: A0A2D4CAP3_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CAP3_PYTIN)

HSP 1 Score: 193 bits (490), Expect = 2.280e-55
Identity = 108/192 (56.25%), Postives = 129/192 (67.19%), Query Frame = 1 
Query:  154 RGGGYGLDAELAARREANYDYXXXAEAQEWIEDVTGEAFASGFAEELKDGRRLCLLINVIKPGAVRRVNN-SKMPFKQMENVSNFLKACRAVGVAEHSLFETVDLFEGKDVGLVVRCLHALGQTVQKSCPDYNGPRLGVRQTEANKREWTPEQQXXXXQLHSSGAMSQLMAGSSKTMERGSVIKTG-VTFGA 723
            RGGGYGLDAELA R    YDY    EA++WIE +TG    + F E L+DG  LC L N I PG +RR+   SKMPFK MENVS FLKACR +GV E+ LFETVDLFE K +GLVVRCLHALG+ VQK+ P +NGP LGV++   N+R++T EQ        +  A S L  GS +TMER  V +   VTFGA
Sbjct:    9 RGGGYGLDAELAQRAAEKYDYEMEDEARQWIEAITGREIGASFGEGLRDGVILCELANKIHPGVIRRIETKSKMPFKLMENVSAFLKACRTIGVNEYELFETVDLFELKXLGLVVRCLHALGRAVQKNYPSFNGPTLGVKEAAKNERQFTEEQI-----AQARNAPSLLSLGSMRTMERLDVSRANDVTFGA 195
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BLAST of mRNA_H-canaliculatus_F_contig1534.3959.1 vs. uniprot
Match: A0A7S1U3T7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3T7_9STRA)

HSP 1 Score: 182 bits (463), Expect = 4.190e-53
Identity = 96/171 (56.14%), Postives = 121/171 (70.76%), Query Frame = 1 
Query:  229 EAQEWIEDVTGEAFASGFAEELKDGRRLCLLINVIKPGAVRRVNNSKMPFKQMENVSNFLKACRAVGVAEHSLFETVDLFEGKDVGLVVRCLHALGQTVQKSCPDYNGPRLGVRQTEANKREWTPEQQXXXXQLHSSGAMSQLMAGSSKTMERGSVIKTGVTFGATQSGTG 741
            +AQ+WIE++TGEAF  GF E LKDGR LCL IN IKPG +RRVN SK+PFKQMENVS FL++CR +GVAEH LFETVDL+E KD+GLVV+C+HALG+ V +S P Y+GP LG ++   N+R +T EQ     Q  ++   ++L  GS+ TMER  V     T G    G G
Sbjct:    1 QAQQWIEELTGEAFPGGFGESLKDGRLLCLTINAIKPGTIRRVNASKLPFKQMENVSTFLRSCRTLGVAEHDLFETVDLYELKDLGLVVQCIHALGRAV-RSLPGYSGPTLGPKEATKNQRRFTAEQ--LSAQRANAAMATKLTMGSAATMERSEVHYFDATSGNRAVGAG 168
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BLAST of mRNA_H-canaliculatus_F_contig1534.3959.1 vs. uniprot
Match: A0A8K1CMC3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMC3_PYTOL)

HSP 1 Score: 191 bits (485), Expect = 4.090e-52
Identity = 105/192 (54.69%), Postives = 130/192 (67.71%), Query Frame = 1 
Query:  154 RGGGYGLDAELAARREANYDYXXXAEAQEWIEDVTGEAFASGFAEELKDGRRLCLLINVIKPGAVRRVNN-SKMPFKQMENVSNFLKACRAVGVAEHSLFETVDLFEGKDVGLVVRCLHALGQTVQKSCPDYNGPRLGVRQTEANKREWTPEQQXXXXQLHSSGAMSQLMAGSSKTMERGSVIKTG-VTFGA 723
            RGGGYGLDAELA R    YDY    EA+ W+E++TG      F E L+DG  LC L+N I PG V+RV   SKMPFK MENVS FL+ACRA+GV E  LFETVDLFE KD+GLVVRC+HALG+  QK+ PD+ GP LGV+++  N+R+++ EQ        +  A S +  GS +TMER  V K   +TFGA
Sbjct:    8 RGGGYGLDAELAKRAAERYDYDLEDEARYWVEEITGMEIGDDFGEGLRDGVILCELVNKIHPGVVKRVETKSKMPFKLMENVSGFLRACRAMGVNEFELFETVDLFELKDLGLVVRCIHALGRATQKNYPDFKGPTLGVKESSKNERQFSEEQL-----AEARNAPSFIAQGSVRTMERADVRKANDLTFGA 194
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BLAST of mRNA_H-canaliculatus_F_contig1534.3959.1 vs. uniprot
Match: A0A024G6R3_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G6R3_9STRA)

HSP 1 Score: 184 bits (468), Expect = 2.740e-51
Identity = 101/192 (52.60%), Postives = 132/192 (68.75%), Query Frame = 1 
Query:  154 RGGGYGLDAELAARREANYDYXXXAEAQEWIEDVTGEAFASGFAEELKDGRRLCLLINVIKPGAVRRVN-NSKMPFKQMENVSNFLKACRAVGVAEHSLFETVDLFEGKDVGLVVRCLHALGQTVQKSCPDYNGPRLGVRQTEANKREWTPEQQXXXXQLHSSGAMSQLMAGSSKTMERGSVIKTG-VTFGA 723
            RGGGYGLDAELA R    YDY    +AQ+W+E +TG      F E LKDG  LC L+N I PG V R+   SK+ F+ MENVSNFLKACR +GV+E  LFETVDLFE KD+GLVVRCLHALG+ VQK+   ++GP+LGV+++  N+R ++ ++      L ++ A S +  GS +TMER  + ++  VTFGA
Sbjct:    9 RGGGYGLDAELAQRATERYDYGMEKDAQDWVESITGLQIGDSFGEGLKDGVILCNLVNKIHPGIVPRIEVKSKIKFRLMENVSNFLKACRTIGVSEFDLFETVDLFELKDLGLVVRCLHALGRAVQKNYAHFDGPKLGVKESVKNERHFSKKKI-----LEAASAPSLISLGSLRTMERLDISRSNDVTFGA 195
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BLAST of mRNA_H-canaliculatus_F_contig1534.3959.1 vs. uniprot
Match: A0A7R9YD67_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YD67_9STRA)

HSP 1 Score: 183 bits (464), Expect = 3.150e-51
Identity = 93/141 (65.96%), Postives = 108/141 (76.60%), Query Frame = 1 
Query:  118 TETPSPDRSPTGRGGGYGLDAELAARREANYDYXXXAEAQEWIEDVTGEAFASGFAEELKDGRRLCLLINVIKPGAVRRVNNSKMPFKQMENVSNFLKACRAVGVAEHSLFETVDLFEGKDVGLVVRCLHALGQTVQKSCP 540
            TE P+P  +   RGGGYGLDA+LA  R   YDY   AE +EWIE VTGEAF  GF E LKDGR LC LIN IKPG++R +N SK+PFKQMENVS FL+ CRA+GVAEH LFETVDL+E KD+G+VV C+HALG  VQK+ P
Sbjct:  281 TEPPAPVSA---RGGGYGLDAQLAQIRLDKYDYDLEAEVKEWIEAVTGEAFPGGFGESLKDGRILCKLINAIKPGSIRIINTSKLPFKQMENVSVFLRNCRALGVAEHDLFETVDLYELKDLGVVVNCIHALGGAVQKTVP 418
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1534.3959.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L3X7_9PHAE1.250e-11582.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNP0_ECTSI9.960e-8160.29Calponin-homology (CH) domain-containing protein n... [more]
A0A835ZHQ8_9STRA6.910e-7258.91Calponin homology domain-containing protein n=1 Ta... [more]
D7FJ16_ECTSI1.480e-6956.22Calponin-homology (CH) domain-containing protein n... [more]
A0A836CGB8_9STRA1.350e-6756.22Calponin homology domain-containing protein n=1 Ta... [more]
A0A2D4CAP3_PYTIN2.280e-5556.25Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A7S1U3T7_9STRA4.190e-5356.14Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A8K1CMC3_PYTOL4.090e-5254.69Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024G6R3_9STRA2.740e-5152.60Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A7R9YD67_9STRA3.150e-5165.96Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1534contigH-canaliculatus_F_contig1534:18655..20979 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score256.9
Seed ortholog evalue1.2e-65
Seed eggNOG ortholog2880.D7FNP0
Preferred nameSCP1
KEGG koko:K20526
GOsGO:0000278,GO:0000281,GO:0000910,GO:0001300,GO:0003674,GO:0003779,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005938,GO:0006996,GO:0007010,GO:0007015,GO:0007049,GO:0007568,GO:0007569,GO:0008092,GO:0008150,GO:0009987,GO:0015629,GO:0016043,GO:0022402,GO:0030029,GO:0030036,GO:0030479,GO:0030674,GO:0030863,GO:0030864,GO:0032502,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0044877,GO:0048869,GO:0051015,GO:0051301,GO:0051764,GO:0060090,GO:0061640,GO:0061645,GO:0071840,GO:0071944,GO:0097435,GO:0099568,GO:1903047
EggNOG free text desc.actin binding
EggNOG OGsCOG5199@1,KOG2046@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCalponin homology domain
Ec32 orthologEc-01_004810.1
Exons4
Model size901
Cds size900
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1534.3959.1prot_H-canaliculatus_F_contig1534.3959.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1534 18655..20979 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929271.3410294-CDS-H-canaliculatus_F_contig1534:18654..190381622929271.3410294-CDS-H-canaliculatus_F_contig1534:18654..19038Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1534 18655..19038 +
1696845744.9621682-CDS-H-canaliculatus_F_contig1534:18654..190381696845744.9621682-CDS-H-canaliculatus_F_contig1534:18654..19038Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1534 18655..19038 +
1622929271.356646-CDS-H-canaliculatus_F_contig1534:19703..198231622929271.356646-CDS-H-canaliculatus_F_contig1534:19703..19823Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1534 19704..19823 +
1696845744.9785361-CDS-H-canaliculatus_F_contig1534:19703..198231696845744.9785361-CDS-H-canaliculatus_F_contig1534:19703..19823Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1534 19704..19823 +
1622929271.3682568-CDS-H-canaliculatus_F_contig1534:20214..203311622929271.3682568-CDS-H-canaliculatus_F_contig1534:20214..20331Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1534 20215..20331 +
1696845744.9888575-CDS-H-canaliculatus_F_contig1534:20214..203311696845744.9888575-CDS-H-canaliculatus_F_contig1534:20214..20331Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1534 20215..20331 +
1622929272.1478903-CDS-H-canaliculatus_F_contig1534:20700..209791622929272.1478903-CDS-H-canaliculatus_F_contig1534:20700..20979Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1534 20701..20979 +
1696845744.9993167-CDS-H-canaliculatus_F_contig1534:20700..209791696845744.9993167-CDS-H-canaliculatus_F_contig1534:20700..20979Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1534 20701..20979 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1534.3959.1

>prot_H-canaliculatus_F_contig1534.3959.1 ID=prot_H-canaliculatus_F_contig1534.3959.1|Name=mRNA_H-canaliculatus_F_contig1534.3959.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=300bp
QQQRSSPPRGASAASGGAPATVVVASATPPAPELLPVGPTETPSPDRSPT
GRGGGYGLDAELAARREANYDYDAEAEAQEWIEDVTGEAFASGFAEELKD
GRRLCLLINVIKPGAVRRVNNSKMPFKQMENVSNFLKACRAVGVAEHSLF
ETVDLFEGKDVGLVVRCLHALGQTVQKSCPDYNGPRLGVRQTEANKREWT
PEQQQQQQQLHSSGAMSQLMAGSSKTMERGSVIKTGVTFGATQSGTGDPA
AISGWAMGSAKTMDRSHITKSGPTFGAEYAGASGDASGASSRLTAGHRS*
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mRNA from alignment at H-canaliculatus_F_contig1534:18655..20979+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1534.3959.1 ID=mRNA_H-canaliculatus_F_contig1534.3959.1|Name=mRNA_H-canaliculatus_F_contig1534.3959.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2325bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1534:18655..20979+ (Hapterophycus canaliculatus Oshoro5f female)
CAGCAGCAGCGGAGTTCGCCGCCCCGCGGGGCATCCGCGGCATCCGGAGG
TGCGCCCGCGACCGTTGTCGTGGCCTCGGCAACCCCGCCCGCACCCGAGC
TTTTGCCCGTGGGACCCACGGAAACGCCGTCCCCCGACCGCTCACCGACG
GGGAGGGGCGGGGGTTACGGTCTTGATGCCGAGCTGGCGGCGAGGCGTGA
AGCAAACTACGACTACGACGCGGAGGCGGAGGCTCAGGAGTGGATCGAGG
ACGTGACAGGCGAGGCATTCGCGAGCGGTTTCGCCGAGGAGTTGAAGGAC
GGGAGGAGGCTGTGCTTGCTGATAAACGTCATCAAGCCGGGAGCGGTGCG
CAGGGTCAACAACTCGAAGATGCCGTTTAAGCAGGTGTGTGAGTGTGCGT
GTGTATGTGTGTTCGTTGTCGTCTCACTTTGTGGAAGATGGAGTGGGTAC
AAGCGGGTAGCCGGGGTCGCACCAGAGGGGGAAGGTCATGCAGTACGTTC
TTTCTCTGCCTCCCTTCGGCGGTGCCCCCCTCTGTTTCTTCATGGCATAC
GAAGCGACCGCCCCTTGCCCTCGTAGGCGGTGAGGCGTAATTTGTTTTGC
TGTGCGCTGCTGACGGCACTAGATACCGCTCTCCACGGGAGGGCACGATG
CGAGAACAATCCAAGGTGGAAGATCGTGTGGACCCACGCAAAGATTCGAA
CTCGCTTGCCGGCAGTCGGAGAGGGTATCCACTTTCGCAGCTGAACCACT
ACGTCATGGCTTACTGAAGAATTTTTTTGTGCGTGTGTGAAATCTTGTCT
GTGATTTCGTTTCTCTTGGTCGTTCCTGTCGGTGTGCCTCTGTACACGTT
ACGCGAGCAGCTGAGTCATTGACGGTGGACGTCTTTTCTGCCCGCCGTTA
GCCACGAATAAACTGTTCCATCAGATATTTTCGTCGAGTGCATCCACAGT
TCTATCAGTTGTTTTCATTGTTTGCGCCTTACTGCTTCTGCTGCTGCTGC
TGCTGCTGCTGCTGCTGCTGCTTCGCGTGATTCCGTTCACCGCACGCAGA
TGGAGAACGTGTCCAACTTCCTCAAAGCTTGCAGAGCGGTGGGCGTGGCG
GAGCACTCGCTGTTCGAAACCGTCGACCTCTTCGAAGGAAAAGACGTCGG
GCTCGTCGTCCGTTGTCTGGTGAGGCTGGCGTCAGATCGGGACGGTTTGG
CTCACAGCAAACGTTACAGCAAACGTTGCACGAAACGTGCGTCTTTGCTT
GCAGGGAAAAAAGAAGAATGGCTCACAGATGGCGTCAGCAGCAACGGTGA
ACAGCCAATCTCGACAATCTCGACGCCCGCACTCAGCATCAGCCGTAAAT
CTCAGCACCAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCCCTCTCTCCCTCTCTCTAGCTCTAGCTCTAGCTCTCTAG
CTCTCTAGCTCTCTAGCTCTCTCTGACCCTCCCACCCCCCCTCCCTCTCC
GTCCTCTCCCGTTCCCGTGTGGTTGTGCCGCTTCCGCCGCCGCCGCCGTC
GTCGCCACAGCACGCTCTGGGTCAAACGGTGCAGAAGAGCTGTCCCGACT
ACAACGGGCCGCGTCTAGGGGTCAGGCAGACGGAGGCCAACAAGCGGGAG
TGGACTCCTGAGCAGCAGCAACAACAGGTGAGACGGAGTGAAGGAATCTG
TTCTGATTCGCTAGAGAGAGGGAAGTGAGATGCCACGCGCAGGAAGCCTA
GGCGAAGGCGTGTCGCCTGCTGTGGGTTGTGTATAGGAGGCACTGGCGGG
AAGGGCTGAGGATAAGGCGCTTTAGGAATCCTGCGGGGCGGCGGACTCAT
TCCTTCTGTCGCTGCTTCACGACCCGGAACATCGGGTAGGTAATATGTTA
CGAACTCCCTACCCCGCTCGTTCAGCGTGGTGAGCAAGAAGCAACTGGTT
AAGAACGAGAATATTTGCACAAAAGAACGCTCTTTCATCCTTTTCATCCC
CTCCCCCCCTCCTACCTCCACTTTGACTGATCCGACGAACGACAAGCAGC
AGCTCCACAGCTCGGGGGCCATGTCGCAGCTCATGGCGGGGTCGAGCAAG
ACGATGGAGCGCGGGAGCGTTATCAAGACGGGCGTGACATTCGGGGCGAC
CCAGTCCGGGACCGGCGACCCCGCAGCGATCTCTGGCTGGGCGATGGGCA
GCGCCAAGACGATGGACAGGTCCCACATCACCAAGAGCGGCCCGACTTTC
GGCGCGGAGTATGCCGGGGCCTCCGGTGACGCGTCGGGGGCGTCGTCCAG
GCTTACAGCGGGTCACCGGAGCTAA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1534:18655..20979+

>mRNA_H-canaliculatus_F_contig1534.3959.1 ID=mRNA_H-canaliculatus_F_contig1534.3959.1|Name=mRNA_H-canaliculatus_F_contig1534.3959.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1800bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1534:18655..20979+ (Hapterophycus canaliculatus Oshoro5f female)
CAGCAGCAGCGGAGTTCGCCGCCCCGCGGGGCATCCGCGGCATCCGGAGG
TGCGCCCGCGACCGTTGTCGTGGCCTCGGCAACCCCGCCCGCACCCGAGC
TTTTGCCCGTGGGACCCACGGAAACGCCGTCCCCCGACCGCTCACCGACG
GGGAGGGGCGGGGGTTACGGTCTTGATGCCGAGCTGGCGGCGAGGCGTGA
AGCAAACTACGACTACGACGCGGAGGCGGAGGCTCAGGAGTGGATCGAGG
ACGTGACAGGCGAGGCATTCGCGAGCGGTTTCGCCGAGGAGTTGAAGGAC
GGGAGGAGGCTGTGCTTGCTGATAAACGTCATCAAGCCGGGAGCGGTGCG
CAGGGTCAACAACTCGAAGATGCCGTTTAAGCAGCAGCAGCAGCGGAGTT
CGCCGCCCCGCGGGGCATCCGCGGCATCCGGAGGTGCGCCCGCGACCGTT
GTCGTGGCCTCGGCAACCCCGCCCGCACCCGAGCTTTTGCCCGTGGGACC
CACGGAAACGCCGTCCCCCGACCGCTCACCGACGGGGAGGGGCGGGGGTT
ACGGTCTTGATGCCGAGCTGGCGGCGAGGCGTGAAGCAAACTACGACTAC
GACGCGGAGGCGGAGGCTCAGGAGTGGATCGAGGACGTGACAGGCGAGGC
ATTCGCGAGCGGTTTCGCCGAGGAGTTGAAGGACGGGAGGAGGCTGTGCT
TGCTGATAAACGTCATCAAGCCGGGAGCGGTGCGCAGGGTCAACAACTCG
AAGATGCCGTTTAAGCAGATGGAGAACGTGTCCAACTTCCTCAAAGCTTG
CAGAGCGGTGGGCGTGGCGGAGCACTCGCTGTTCGAAACCGTCGACCTCT
TCGAAGGAAAAGACGTCGGGCTCGTCGTCCGTTGTCTGATGGAGAACGTG
TCCAACTTCCTCAAAGCTTGCAGAGCGGTGGGCGTGGCGGAGCACTCGCT
GTTCGAAACCGTCGACCTCTTCGAAGGAAAAGACGTCGGGCTCGTCGTCC
GTTGTCTGCACGCTCTGGGTCAAACGGTGCAGAAGAGCTGTCCCGACTAC
AACGGGCCGCGTCTAGGGGTCAGGCAGACGGAGGCCAACAAGCGGGAGTG
GACTCCTGAGCAGCAGCAACAACAGCACGCTCTGGGTCAAACGGTGCAGA
AGAGCTGTCCCGACTACAACGGGCCGCGTCTAGGGGTCAGGCAGACGGAG
GCCAACAAGCGGGAGTGGACTCCTGAGCAGCAGCAACAACAGCAGCAGCT
CCACAGCTCGGGGGCCATGTCGCAGCTCATGGCGGGGTCGAGCAAGACGA
TGGAGCGCGGGAGCGTTATCAAGACGGGCGTGACATTCGGGGCGACCCAG
TCCGGGACCGGCGACCCCGCAGCGATCTCTGGCTGGGCGATGGGCAGCGC
CAAGACGATGGACAGGTCCCACATCACCAAGAGCGGCCCGACTTTCGGCG
CGGAGTATGCCGGGGCCTCCGGTGACGCGTCGGGGGCGTCGTCCAGGCTT
ACAGCGGGTCACCGGAGCTAACAGCAGCTCCACAGCTCGGGGGCCATGTC
GCAGCTCATGGCGGGGTCGAGCAAGACGATGGAGCGCGGGAGCGTTATCA
AGACGGGCGTGACATTCGGGGCGACCCAGTCCGGGACCGGCGACCCCGCA
GCGATCTCTGGCTGGGCGATGGGCAGCGCCAAGACGATGGACAGGTCCCA
CATCACCAAGAGCGGCCCGACTTTCGGCGCGGAGTATGCCGGGGCCTCCG
GTGACGCGTCGGGGGCGTCGTCCAGGCTTACAGCGGGTCACCGGAGCTAA
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