mRNA_H-canaliculatus_F_contig15322.3948.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig15322.3948.1 vs. uniprot
Match: D8LRA5_ECTSI (SEC7 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRA5_ECTSI) HSP 1 Score: 167 bits (423), Expect = 1.240e-44 Identity = 100/155 (64.52%), Postives = 104/155 (67.10%), Query Frame = 1
Query: 199 GLDKAAVGGYLGEAGAKRANGRGA-----------------------------------GGAGGNGA----YQGDTAEFHEEVLEAFVETFDFRGQGMLDSLRMFLEAFRLPGEAQQIDRILHRFAQRVHRDCLEAARGMLASADVAYLLSFSVV 546
GLDKAAVG YLGEAGAKR NGRG GG GA YQGDT EFH EVLEAFV+TFDFRGQG+L SLRMFL AFRLPGEAQQIDRILH FAQRVHRDC+EAARGMLASADVAYLLSFSV+
Sbjct: 509 GLDKAAVGAYLGEAGAKRVNGRGXXXXXXXXXEGXXXXXXXXXXXXXXXXXXXXXXRTLGGVSARGAAAAVYQGDTEEFHAEVLEAFVDTFDFRGQGILASLRMFLGAFRLPGEAQQIDRILHAFAQRVHRDCVEAARGMLASADVAYLLSFSVI 663
BLAST of mRNA_H-canaliculatus_F_contig15322.3948.1 vs. uniprot
Match: A0A7S3YER2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YER2_HETAK) HSP 1 Score: 146 bits (368), Expect = 3.250e-40 Identity = 81/157 (51.59%), Postives = 102/157 (64.97%), Query Frame = 1
Query: 76 GARAFAAKPREGLKLLQREGQKPSGGPLDAVEVAAFLRSTPGLDKAAVGGYLGEAGAKRANGRGAGGAGGNGAYQGDTAEFHEEVLEAFVETFDFRGQGMLDSLRMFLEAFRLPGEAQQIDRILHRFAQRVHRDCLEAARGMLASADVAYLLSFSVV 546
GARAF A P++GL+ LQ +G P PL+ A FLR+ PGL K +G YLG AG + A G AY+GDT EFH+ VL+AFV +FDF GQ +L +LRM+L AFRLPGEAQQIDR+L FA H C E +G+ A+ D +LL FS+V
Sbjct: 3 GARAFNAAPKKGLQFLQAQGMLPD--PLEPEAAARFLRTAPGLHKQKIGEYLGAAGRPATDP-----ATGKAAYRGDTEEFHQAVLQAFVRSFDFAGQPLLGALRMYLSAFRLPGEAQQIDRVLQAFADHAHARCREGRQGLFATPDACFLLCFSLV 152
BLAST of mRNA_H-canaliculatus_F_contig15322.3948.1 vs. uniprot
Match: A0A7S1TTF5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTF5_9STRA) HSP 1 Score: 142 bits (357), Expect = 7.480e-36 Identity = 84/164 (51.22%), Postives = 101/164 (61.59%), Query Frame = 1
Query: 55 RKLALARGARAFAAKPREGLKLLQREGQKPSGGPLDAVEVAAFLRSTPGLDKAAVGGYLGEAGAKRANGRGAGGAGGNGAYQGDTAEFHEEVLEAFVETFDFRGQGMLDSLRMFLEAFRLPGEAQQIDRILHRFAQRVHRDCLEAARGMLASADVAYLLSFSVV 546
RK ARGA F KPR G LQ +G P PL VA+FLRS PG+DK AVG YLG G+ + G + DT FH VL AFV++FDFRGQ +L++LRMFL AFRLP EAQQIDR+L FA+ C E RG+ A+ DV YLLSFS++
Sbjct: 152 RKEEFARGAELFHKKPRRGFNYLQGKGLLPK--PLTPTSVASFLRSAPGMDKRAVGEYLGTMGSVEVDTDT-----GMTTHVADTVAFHAAVLTAFVKSFDFRGQPILEALRMFLAAFRLPSEAQQIDRVLEAFAKEACESCAEGMRGLFATQDVPYLLSFSII 308
BLAST of mRNA_H-canaliculatus_F_contig15322.3948.1 vs. uniprot
Match: A0A7R9U5Y8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5Y8_9STRA) HSP 1 Score: 140 bits (352), Expect = 4.040e-35 Identity = 87/182 (47.80%), Postives = 107/182 (58.79%), Query Frame = 1
Query: 1 PPAETALPSPSRCRRVQRRKLALARGARAFAAKPREGLKLLQREGQKPSGGPLDAVEVAAFLRSTPGLDKAAVGGYLGEAGAKRANGRGAGGAGGNGAYQGDTAEFHEEVLEAFVETFDFRGQGMLDSLRMFLEAFRLPGEAQQIDRILHRFAQRVHRDCLEAARGMLASADVAYLLSFSVV 546
P A A P+ ++ RK L RGA F KPR GL LQ P PL VA FLRS PGLDK AVG YLG+ G + G A+ DT FH LE+FV++FDF GQ +L SLRMFL AFRLP EAQ+IDR+L FA+ + C E ++G+ A+ DV YLLSFS++
Sbjct: 28 PAAGAASPALPNFWTLRTRKAELGRGAAIFHKKPRLGLDYLQGRQLLPK--PLTPEAVALFLRSAPGLDKVAVGEYLGKMGTVEVDETG------RAAHVADTVAFHAATLESFVKSFDFSGQSILPSLRMFLAAFRLPHEAQEIDRVLEAFAKEAYASCEEGSQGLFATPDVPYLLSFSII 201
BLAST of mRNA_H-canaliculatus_F_contig15322.3948.1 vs. uniprot
Match: A0A5D6XRC6_9STRA (SEC7 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRC6_9STRA) HSP 1 Score: 127 bits (319), Expect = 1.180e-30 Identity = 86/175 (49.14%), Postives = 109/175 (62.29%), Query Frame = 1
Query: 40 RRVQRRKLALARGARAFAAKPREGLKLLQREGQKPSGGPLDAVEVAAFLRSTP-GLDKAAVGGYLGEAGA-----KRANGRGAGGAGGNGAYQGDTAEFHEEVLEAFVETFDFRGQGMLDSLRMFLEAFRLPGEAQQIDRILHRFAQRVHRDCLEAARGMLASADVAYLLSFSVV 546
RR QR+K G + F KP G+K LQ+ P+ PLDA +AAFLRS P GL K AVG YLG G +RA ++ DT FH VL FVE+F+F G+ ++ +LRMFL +FRLPGEAQQIDRIL+ F+ +V+ C E R +LASADVAYLLSFS++
Sbjct: 551 RRRQRKKF-FQHGIQEFNRKPLAGIKYLQQNAFLPT--PLDAPALAAFLRSLPQGLHKDAVGMYLGAMGKDVKEFERAE-----------IHEADTMAFHRAVLAQFVESFNFEGESIVAALRMFLASFRLPGEAQQIDRILNTFSLQVYAQCRE--RSLLASADVAYLLSFSLI 709
BLAST of mRNA_H-canaliculatus_F_contig15322.3948.1 vs. uniprot
Match: F0W8P4_9STRA (Uncharacterized protein AlNc14C36G3170 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W8P4_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.600e-30 Identity = 82/189 (43.39%), Postives = 114/189 (60.32%), Query Frame = 1
Query: 1 PPAETALPSPSRCRRVQRRKLALARGARAFAAKPREGLKLLQREGQKPSGGPLDAVEVAAFLRSTP-GLDKAAVGGYLGEAGA------KRANGRGAGGAGGNGAYQGDTAEFHEEVLEAFVETFDFRGQGMLDSLRMFLEAFRLPGEAQQIDRILHRFAQRVHRDCLEAARGMLASADVAYLLSFSVV 546
P T + + + R + RK +G + F KP +G++ LQ G PS PL+ + +A FLRS P G+DK VG YLG G K ++ DT FH++VL+ +V +FDF G+ +LD+LRMFL +FRLPGEAQQIDRIL+ FA RV++ C + R ++AS DVAYLLSFS++
Sbjct: 445 PGVHTTVKTSTSLRDKKERKRCYQKGVQEFNRKPVDGIRCLQMYGFLPS--PLEPLNMAMFLRSLPQGIDKKMVGIYLGAKGKELNIFEKEC------------VHEADTVSFHQDVLKQYVASFDFDGECILDALRMFLASFRLPGEAQQIDRILNTFAYRVYQQCRD--RFLMASPDVAYLLSFSLI 617
BLAST of mRNA_H-canaliculatus_F_contig15322.3948.1 vs. uniprot
Match: A0A0P1AUI7_PLAHL (Arf guanine-nucleotide exchange factor gnom-like n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AUI7_PLAHL) HSP 1 Score: 126 bits (316), Expect = 2.980e-30 Identity = 81/169 (47.93%), Postives = 110/169 (65.09%), Query Frame = 1
Query: 43 RVQRRKLALARGARAFAAKPREGLKLLQREGQKPSGGPLDAVEVAAFLRSTP-GLDKAAVGGYLGEAGAKRANGRGAGGAGGNGAYQGDTAEFHEEVLEAFVETFDFRGQGMLDSLRMFLEAFRLPGEAQQIDRILHRFAQRVHRDCLEAARGMLASADVAYLLSFSVV 546
R ++RK G + F KP G+K LQ+ P+ PLD+V +A FLRS P GL+K AVG YLG A G+ G ++ DT +FH +VL FV +F+F G+ ++ +LRMFL +FRLPGEAQQIDRIL+ F+ +V+ C E R ++ASADVAYLLSFS++
Sbjct: 549 RNRQRKKFFQHGIQEFNRKPLAGVKYLQQNTFLPT--PLDSVSLATFLRSLPQGLNKNAVGNYLG------AMGKEVKGFEKTDIHEADTMDFHRDVLTNFVRSFNFEGESIVTALRMFLASFRLPGEAQQIDRILNTFSIQVYEQCRE--RFLMASADVAYLLSFSLI 707
BLAST of mRNA_H-canaliculatus_F_contig15322.3948.1 vs. uniprot
Match: A0A8K1CB56_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CB56_PYTOL) HSP 1 Score: 122 bits (307), Expect = 4.800e-29 Identity = 78/169 (46.15%), Postives = 107/169 (63.31%), Query Frame = 1
Query: 43 RVQRRKLALARGARAFAAKPREGLKLLQREGQKPSGGPLDAVEVAAFLRSTP-GLDKAAVGGYLGEAGAKRANGRGAGGAGGNGAYQGDTAEFHEEVLEAFVETFDFRGQGMLDSLRMFLEAFRLPGEAQQIDRILHRFAQRVHRDCLEAARGMLASADVAYLLSFSVV 546
R ++RK RG + F KP G+K LQ+ PS PLD +A FLRS P GL+KA+VG YLG G + + ++ DT EFH +VL FV +F+F G+ ++ +LRMFL +FRLPGEAQQIDRIL+ F+++V + R ++AS DVAYLLSFS++
Sbjct: 521 RKRQRKKIFQRGIQEFNRKPLSGIKYLQQNSFLPS--PLDTKSLATFLRSLPPGLNKASVGIYLGAMGKEVKDFEK------TEIHEADTIEFHRDVLRCFVRSFNFEGESIVAALRMFLASFRLPGEAQQIDRILNTFSEQVFEQSRD--RFLMASVDVAYLLSFSLI 679
BLAST of mRNA_H-canaliculatus_F_contig15322.3948.1 vs. uniprot
Match: A0A3F2RWQ3_9STRA (SEC7 domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RWQ3_9STRA) HSP 1 Score: 122 bits (306), Expect = 5.400e-29 Identity = 78/167 (46.71%), Postives = 108/167 (64.67%), Query Frame = 1
Query: 49 QRRKLALARGARAFAAKPREGLKLLQREGQKPSGGPLDAVEVAAFLRSTP-GLDKAAVGGYLGEAGAKRANGRGAGGAGGNGAYQGDTAEFHEEVLEAFVETFDFRGQGMLDSLRMFLEAFRLPGEAQQIDRILHRFAQRVHRDCLEAARGMLASADVAYLLSFSVV 546
++RK G + F KP G+K LQ+ P+ PLD++ +A FLRS P GL+K AVG YLG A G+ G ++ DT +FH +VL FV +F+F G+ ++ +LRMFL +FRLPGEAQQIDRIL+ F+ +V+ C E R ++AS DVAYLLSFS++
Sbjct: 469 RQRKKFFQHGIQEFNRKPMAGIKYLQQNTFLPT--PLDSMSLATFLRSLPQGLNKNAVGVYLG------AMGKEVKGFEKTDIHEADTMDFHRDVLTNFVRSFNFEGESIVAALRMFLASFRLPGEAQQIDRILNTFSLQVYEQCRE--RFLMASVDVAYLLSFSLI 625
BLAST of mRNA_H-canaliculatus_F_contig15322.3948.1 vs. uniprot
Match: A0A421GVL4_9STRA (SEC7 domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GVL4_9STRA) HSP 1 Score: 122 bits (306), Expect = 6.180e-29 Identity = 78/167 (46.71%), Postives = 108/167 (64.67%), Query Frame = 1
Query: 49 QRRKLALARGARAFAAKPREGLKLLQREGQKPSGGPLDAVEVAAFLRSTP-GLDKAAVGGYLGEAGAKRANGRGAGGAGGNGAYQGDTAEFHEEVLEAFVETFDFRGQGMLDSLRMFLEAFRLPGEAQQIDRILHRFAQRVHRDCLEAARGMLASADVAYLLSFSVV 546
++RK G + F KP G+K LQ+ P+ PLD++ +A FLRS P GL+K AVG YLG A G+ G ++ DT +FH +VL FV +F+F G+ ++ +LRMFL +FRLPGEAQQIDRIL+ F+ +V+ C E R ++AS DVAYLLSFS++
Sbjct: 356 RQRKKFFQHGIQEFNRKPMAGIKYLQQNTFLPT--PLDSMSLATFLRSLPQGLNKNAVGVYLG------AMGKEVKGFEKTDIHEADTMDFHRDVLTNFVRSFNFEGESIVAALRMFLASFRLPGEAQQIDRILNTFSLQVYEQCRE--RFLMASVDVAYLLSFSLI 512 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig15322.3948.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig15322.3948.1 >prot_H-canaliculatus_F_contig15322.3948.1 ID=prot_H-canaliculatus_F_contig15322.3948.1|Name=mRNA_H-canaliculatus_F_contig15322.3948.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=182bp PPAETALPSPSRCRRVQRRKLALARGARAFAAKPREGLKLLQREGQKPSGback to top mRNA from alignment at H-canaliculatus_F_contig15322:243..1584- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig15322.3948.1 ID=mRNA_H-canaliculatus_F_contig15322.3948.1|Name=mRNA_H-canaliculatus_F_contig15322.3948.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1342bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15322:243..1584- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig15322:243..1584- >mRNA_H-canaliculatus_F_contig15322.3948.1 ID=mRNA_H-canaliculatus_F_contig15322.3948.1|Name=mRNA_H-canaliculatus_F_contig15322.3948.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1092bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15322:243..1584- (Hapterophycus canaliculatus Oshoro5f female)back to top |