mRNA_H-canaliculatus_F_contig1530.3936.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1530.3936.1 vs. uniprot
Match: A0A6H5JD01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD01_9PHAE) HSP 1 Score: 536 bits (1382), Expect = 1.680e-170 Identity = 288/427 (67.45%), Postives = 323/427 (75.64%), Query Frame = 1
Query: 34 GARTRMG-VVRLAWIPGDPCLCVDAPGLVGEACRGWLISRAA---DSSSRGDGQKMPAVPIASRTGEEARVDLRVLALSGCRDGALVSPLPLPAVPAQQEAFAAATAGAAHLARRFPDGGVEPGDAGLDAGGPLSSQPXXXXXXXXLWQDTKPEQKAVVTQLDLMSFQHFWLANVEKKVLMVAIPKVACTQVHALFLRLQGSKNWNSPYMQEIHYHQDMDKYKLSAMPGMTPAMASSILNDPTWTKGVFLRDPAERLLSCFLDKIVHRKSYSVSVFGANDYLSFEKFVALTSKGAQQRFHSQYPRGNLGLSRKSNPHWRPQLFFGLDKFLPYLDFIGDFKHVGAHSEAFLKRAGLWEEFGASGWGPSGEASFFQRCGCFRTTVQGHATGSRDSKGQYYTPPLLASVREAYASTDYRMLARLGWWNDT 1302
G R+G VRLAWIP DPC C DAPG VGEACRGWL++RAA SRGDG+ + D +ALS C+DGA SPLPLPAV ++ A AA AGA++ ARR + XXXXXXXXLWQ+ KPEQKAVVTQ DL SFQHFWLANVE KVLMVAIPKVACTQVHALFLRLQGS+NW++ M+EIHYH+DMDKYKLS MP M P AS+ILNDPTWTKGVFLRDPAERLLSCFLDK+VHR+SYSV+VF A + LSFEKFV LTSK A+ R YP GNLGL+R+SNPHWRPQLFFGLDKFLPY DF+GDFKHV HSE FLKRAGLW+EFGASGWG G+A+FFQR +TV+GHATGS DS GQYYTP LLASVREAYA TDY++LA LGWWN+T
Sbjct: 645 GDSNRVGNAVRLAWIPADPCSCTDAPGAVGEACRGWLMARAAGPPSRHSRGDGEA-----------QAPSEDGLPVALSVCKDGAFESPLPLPAVREEEAARAAQGAGASYSARR----------SXXXXXXXXXXXXXXXXXXXXLWQEVKPEQKAVVTQNDLDSFQHFWLANVEHKVLMVAIPKVACTQVHALFLRLQGSENWDTQRMEEIHYHKDMDKYKLSTMPNMPPGRASAILNDPTWTKGVFLRDPAERLLSCFLDKVVHRRSYSVNVFKAEEVLSFEKFVDLTSKTAKARLQQDYPGGNLGLTRRSNPHWRPQLFFGLDKFLPYFDFVGDFKHVQEHSEEFLKRAGLWKEFGASGWGRWGQAAFFQR-----STVRGHATGSHDSFGQYYTPELLASVREAYADTDYKLLASLGWWNET 1045
BLAST of mRNA_H-canaliculatus_F_contig1530.3936.1 vs. uniprot
Match: D8LIV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIV5_ECTSI) HSP 1 Score: 444 bits (1142), Expect = 1.470e-136 Identity = 244/374 (65.24%), Postives = 267/374 (71.39%), Query Frame = 1
Query: 34 GARTRMG-VVRLAWIPGDPCLCVDAPGLVGEACRGWLISRAA---DSSSRGDGQKMPAVPIASRTGEEARVDLRVLALSGCRDGALVSPLPLPAVPAQQEAFAAATAGAAHLARRFPDGGVEPGDAGLDAGGPLSSQPXXXXXXXXLWQDTKPEQKAVVTQLDLMSFQHFWLANVEKKVLMVAIPKVACTQVHALFLRLQGSKNWNSPYMQEIHYHQDMDKYKLSAMPGMTPAMASSILNDPTWTKGVFLRDPAERLLSCFLDKIVHRKSYSVSVFGANDYLSFEKFVALTSKGAQQRFHSQYPRGNLGLSRKSNPHWRPQLFFGLDKFLPYLDFIGDFKHVGAHSEAFLKRAGLWEEFGASGWGPSGEASFFQ 1143
G R+G VRLAWIP DPC C DAPG VGEACRGWLISRAA SRGDG+ A + G D LALS C+D A SPL LPAVP + XXXXXXXXLWQ+ KP+QKAVVTQ DL SFQHFWLANVE KVLMVAIPKVACTQVHALFLRLQGS+NWN+ M+EIHYH+DMDKYKLS MP M P AS+ILNDPTWTKGVFLRDP ERLLSCFLDK+VHR+SYSV+VF A + LSFEKFV LTSK A+ R YP GNLGL+R+SNPHWRPQLFFGLDKFLPY DF+GDFKHV HSE FLKRAGLWE+FGASGWG G+A+FFQ
Sbjct: 558 GDSNRVGDAVRLAWIPADPCSCTDAPGAVGEACRGWLISRAAGPPSRHSRGDGE---AQAPSESAGTPPGPDGLSLALSVCKDRAFESPLRLPAVPEEXXXX--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWQEVKPKQKAVVTQEDLNSFQHFWLANVEHKVLMVAIPKVACTQVHALFLRLQGSENWNTQRMEEIHYHKDMDKYKLSTMPNMPPERASAILNDPTWTKGVFLRDPTERLLSCFLDKVVHRRSYSVNVFKAEEVLSFEKFVDLTSKTAKARLQKDYPGGNLGLTRRSNPHWRPQLFFGLDKFLPYFDFVGDFKHVQEHSEEFLKRAGLWEKFGASGWGRWGQAAFFQ 920
BLAST of mRNA_H-canaliculatus_F_contig1530.3936.1 vs. uniprot
Match: F0Y5E9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5E9_AURAN) HSP 1 Score: 163 bits (412), Expect = 1.680e-40 Identity = 103/286 (36.01%), Postives = 143/286 (50.00%), Query Frame = 1
Query: 508 DLMSFQHFWLANVEKKVLMVAIPKVACTQVHALFLRLQGSKNWNSPYMQEIHYHQDMDKYKLSAMPGMTPAMASSILNDPTWTKGVFLRDPAERLLSCFLDKIVHRKSYSVSVFGA----NDYLSFEKFVALTSKGAQQRFHSQYPRGNLGLSRKSNPHWRPQLFF-GLDKFLPYLDFIGDFKHVGAHSEAFLKRAGLWEEFGASGW-----------------GPSGEASFFQRCGCFRTTVQGHATGSRDSKGQYYTPPLLASVREAYASTDYRMLARLGWWND 1299
+L QH +V+ K+L A+PKVACT+ LF RL+G +N N + + H+ QD + M A++++NDPTWTK F RDPAERLLS +LDK + K YS + + +++F FV + + R GL +NPHWRPQ F ++KFLP +F+G F H+G H+E L+ GLWE +GA+GW G FQ+ + T T + YTP LLA VR AYA DY M +G+ D
Sbjct: 35 ELRYAQHHMYVDVKHKLLYCAVPKVACTEFMRLFFRLKG-ENQNQRWKGDPHFRQDKPLFNKI----MNVTTATALMNDPTWTKFAFWRDPAERLLSAYLDKFANGKRYSTGSYAVRIFKDKHMNFSGFVDRIASKNRVRGKPD------GLHPNTNPHWRPQRFMCNMEKFLPAYNFVGSFDHLGDHAEKLLRALGLWEAYGAAGWTKALKRTVVDKIKGAVGGGDDGGRMFQKNAAWHQT-----TKMKPENHDLYTPELLAKVRRAYAM-DYEMFDAVGFGGD 303
BLAST of mRNA_H-canaliculatus_F_contig1530.3936.1 vs. uniprot
Match: A0A7S4E7B5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E7B5_9STRA) HSP 1 Score: 154 bits (388), Expect = 7.160e-37 Identity = 109/284 (38.38%), Postives = 142/284 (50.00%), Query Frame = 1
Query: 502 QLDLMSFQHFWLANVEKKVLMVAIPKVACTQVHALFLRLQGSKN---------------WNSPYMQEIHYHQDMDKYKLSAMPGMTPAMASSILNDPTWTKGVFLRDPAERLLSCFLDKIVH----RKSYSVSVFGANDYLSFEKFVALTSKGAQQRFHSQYPRGNLGLSRKSNPHWRPQLFF-GLDKFLPYLDFIGDFKHVGAHSEAFLKRAGLWEEFGASGW-----GPSGEASFFQRCGC-FRTTVQGHATGSRDSKGQYYTPPLLASVREAYASTDYRML 1275
+LD S H + E K+L AIPKVACT+ LF R+ SK + + + H+ D A TP A+ +ND +TK VF RDPAERLLS +LDK H R Y + +F + ++F FV + ++R + GL +NPHWRPQ F L+KFLP F+G F H+ H+E L++A LWEEFGA GW G SG+ G F+ HA G+ QYYTP LLA VR+AYA DY ML
Sbjct: 63 ELDYAS--HHAYVDFEHKLLYCAIPKVACTEFFRLFHRMADSKKKCATVGQCATQMTERQRNRWKGDPHFRPDKPILNKVA----TPEEATHAMNDKNFTKFVFFRDPAERLLSAYLDKFEHGSRYRVGYGLRIF-KDPKMNFSGFVERIERVNKRRSNPD------GLHPHTNPHWRPQRFMCNLEKFLPLYTFVGSFTHLREHTELMLRQANLWEEFGARGWPLKAPGGSGKVPARGPTGSMFQKNTAWHADGTSSKTEQYYTPELLARVRKAYAM-DYEML 332
BLAST of mRNA_H-canaliculatus_F_contig1530.3936.1 vs. uniprot
Match: A0A7S2WJM7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJM7_9STRA) HSP 1 Score: 132 bits (332), Expect = 3.910e-30 Identity = 84/230 (36.52%), Postives = 120/230 (52.17%), Query Frame = 1
Query: 469 DTKPEQKAVVTQLDLMSFQHFWLANVEKKVLMVAIPKVACTQVHALFLRLQGSKNWNSPYMQEIHYHQDMDKYKLSAMPGMTPAMASSILNDPTWTKGVFLRDPAERLLSCFLDKI---VHRKS-YSVSVFGANDYLSFEKFVA-LTSKGAQQRFHSQYPRGNLGLSRKSNPHWRPQL-FFGLDKFLPYLDFIGDFKHVGAHSEAFLKRAGLWEEFGASGWGPSGEASFF 1140
+ +P + LD H + +++ +VL+ AIPKVA ++ LFLRLQG W + ++ L+++ + PA A IL DP++ KGVF RDP RLLSC+LDK HR + YS+ +FG N LSF +F+ +T+ GA N HWRPQ +++ F G+F+ + H AFL +AGLW+EFG SGWGP S F
Sbjct: 103 EQRPLLPIELKSLDFRFLAHA-IVDLKHRVLICAIPKVASSEWKKLFLRLQGDPEWAAEPWWKMR--------NLTSLYKLGPARAMEILQDPSFIKGVFFRDPFSRLLSCYLDKFSAGTHRANKYSLKIFGDNHLLSFPEFLKKVTAAGAPM-----------------NVHWRPQADICQIEELFHLYSFFGNFERLPEHGRAFLTQAGLWKEFGESGWGPGENVSMF 306
BLAST of mRNA_H-canaliculatus_F_contig1530.3936.1 vs. uniprot
Match: A0A835YWJ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWJ0_9STRA) HSP 1 Score: 140 bits (353), Expect = 4.100e-30 Identity = 121/433 (27.94%), Postives = 169/433 (39.03%), Query Frame = 1
Query: 304 VPAQQEAFAAATAGAAHLARRFPDG--------GVEPGDAGLDAGGPLSSQPXXXXXXXXLWQDTKPEQKAVVT--QLDLMSFQHFWLANVEKKVLMVAIPKVACTQVHALFLRLQGSKNWNSPYMQEIHYHQDMDKYKLSAMPGMTPAMASSILNDPTWTKGVFLRDPAERLLS----------------------------------------------------CFLDKIVHRKSYSVSVFGANDYLSFEKFVAL---------------------------------------TSKGAQQRFHSQYPRGNLGLSRKSNPHWRPQLFFGLDKFLPYLDFIGDFKHVGAHSEAFLKRAGLWEEFGASGWGPSGEASFFQRCGCFR---------TTVQGHATGSRDSKGQYYTPPLLASVREAYASTDYRM 1272
+P Q A AAA A H A +P G G E G A G ++ P P+ A VT D+++ QHFWL N K+L +AIPKVACTQ+ LFLR + +W++ M IH+H ++ A +T A ++I+NDP WT+ V LR+P R+LS +LDK V SY V Y+SF +FV + T +R +P + +PH RPQ F +DKFLPY++FI ++ V H L++ G+WE++GASGWG + S TVQ H+T S +YTP + V +YA DY M
Sbjct: 445 LPCQARAAAAALAKQPHNASEYPCGPARYRLPEGAELMGGGSGAWGARAAPPLPRTEDARRAPLLPPQPAAPVTATDADVVALQHFWLVNKRHKLLYLAIPKVACTQMIQLFLRAVNATDWDTDVMANIHFHSG--NKRIRAKTQVTAAQLTAIMNDPQWTRAVVLREPRRRVLSLPCVRALFRPLRYPDKLVCGLLSPRRLPRVLTIVTNVRALWRLRDQLTQLPCAYLDKYVLHGSYGDRVRADKRYVSFHEFVEVXXXXXXXXXXXXXESTPVRXXXXXXXXXXXXXXXXXQVDTGMRLARRRTGAHPLSTV------DPHHRPQALF-MDKFLPYMNFIAEYTQVQHHVREMLEKVGMWEQYGASGWGRDKQQSXXXXXXXXXXXAIYQPNSNTVQRHSTNSEALHELFYTPEIEQMVMRSYA-IDYDM 867
BLAST of mRNA_H-canaliculatus_F_contig1530.3936.1 vs. uniprot
Match: A0A7S0TAN7_9STRA (Hypothetical protein n=1 Tax=Chrysocystis fragilis TaxID=1411660 RepID=A0A7S0TAN7_9STRA) HSP 1 Score: 133 bits (335), Expect = 7.150e-30 Identity = 89/260 (34.23%), Postives = 133/260 (51.15%), Query Frame = 1
Query: 553 KVLMVAIPKVACTQVHALFLRLQGSKNWNSPYMQEIHYHQDMDKYKLSAMPGMTPAMASSILNDPTWTKGVFLRDPAERLLSCFLDKIVH------RKSYSVSVFGANDYLSFEKFVA-LTSKGAQQRFHSQYPRGNLGLSRKSNPHWRPQLFF-GLDKFLPYLDFIGDFKHVGAHSEAFLKRAGLWEEFGASGWGP------SGEASFFQRCGCFRTTVQGHATGSRDSKGQYYTPP-LLASVREAYASTDYRMLARLG 1287
K+++ A+PKVACT++ L RL G W ++ H+ D ++ ++ A A+ ++ND +WTK +FLRDP RL S +LDK V +Y + +FG + LSFE F + S + H GL +N HW+PQ + +KF F+G ++++ H+E+ L+ GLW++FGASGW P + AS R F + H TGS Y PP L A+VR AY S DY + +G
Sbjct: 111 KLVLCAVPKVACTELIKLVYRLSGDPRWR----RDPHFRGDSPIFRKLSL-----AEANEMMNDDSWTKVIFLRDPLSRLASAYLDKFVQSPKRGIHANYGIRLFGES--LSFEAFARRVASNNTDRASHD-------GLHLGTNLHWKPQRYICSFEKFAHLYHFVGRYENIREHAESLLRALGLWDDFGASGWAPPLGKNHTPPASRVPRDSIFARSSS-HKTGSASKYADLYAPPGLEAAVRAAY-SMDYDLFDAIG 350
BLAST of mRNA_H-canaliculatus_F_contig1530.3936.1 vs. uniprot
Match: A0A8J2SW07_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SW07_9STRA) HSP 1 Score: 124 bits (311), Expect = 3.190e-26 Identity = 89/257 (34.63%), Postives = 121/257 (47.08%), Query Frame = 1
Query: 553 KVLMVAIPKVACTQVHALFLRLQGSKNWNSPYMQEIHYHQDMDKYKLSAMPGMTPAMASSILNDPTWTKGVFLRDPAERLLSCFLDKIVHRKS------YSVSVFGANDYLSFEKFVALTSKGAQQRFHSQYPRGNLGLSRKSNPHWRPQLFF-GLDKFLPYLDFIGDFKHVGAHSEAFLKRAGLWEEFGASGWG---------PSGEASFFQRCGCFRTTVQGHATGSRDSKGQYYTPPLLASVREAYASTDYRML 1275
K+ AIPKVACT+ L RL+G +W ++ H+ D + + A ILND WTK FLRDPA R LS +LDK V S Y + FG L++ +FV R+ + GL SN HW+PQ F L+KFL FIG ++ + H+E L+ LW+ +G+ GWG P S R F + H+T + K Y TP +L+ +RE YA DY ML
Sbjct: 150 KIAFCAIPKVACTEFIRLMYRLEGDVHW----WKDPHFRTDAS----TLLKRGDEREAEHILNDANWTKVAFLRDPATRALSAYLDKFVDSPSRGIHGNYGLRHFGRE--LNWTEFVDTLGSENTDRYKPE------GLHVGSNAHWKPQRFHCSLEKFLTKYQFIGRYESLRDHAEMLLRSLNLWDAYGSKGWGHRDKRQRLMPKPSDSIPVRDSLFAQKAK-HSTNADARKASYLTPSILSKLREIYAM-DYEML 388
BLAST of mRNA_H-canaliculatus_F_contig1530.3936.1 vs. uniprot
Match: A0A7S2VCG1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VCG1_9STRA) HSP 1 Score: 120 bits (301), Expect = 3.780e-26 Identity = 89/265 (33.58%), Postives = 128/265 (48.30%), Query Frame = 1
Query: 553 KVLMVAIPKVACTQVHALFLRLQGSKNW--------NSPYMQEIHYHQDMDKYKLSAMPGMTPAMASSILNDPTWTKGVFLRDPAERLLSCFLDKIVHRKSYSV-----SVFGANDYLSFEKFVALTSKGAQQRFHSQYPRGNLGLSRKS--NPHWRPQLFFGLDKFLPYLDFIGDFKH-VGAHSEAFLKRAGLWEEFGASGWGPSGEASFFQRCGCFRTTVQGHATGSRDSKGQYYTPPLLASVREAYASTDYRMLARLGWWND 1299
K+L PKVACT LF R++G +W +SPY ++Y + YK PA A +L DP+WT+ +F+R+P ERLLS +LDK+V SY + V + L + F + S R + LG K +PHWRPQ K+ Y++F+G H V ++ L + G W+++GA+GW PSG F HAT ++D+ YYTP L V E DY M +LG+ N+
Sbjct: 64 KLLFWTTPKVACTVWKKLFRRMEGYSDWQVENDNLPHSPYTNGLNY---LYHYK--------PAQADLMLTDPSWTRAIFVREPKERLLSAYLDKVVGNHSYYLRKHCCKVTTIEEILQCDVFHRIPSPSPSLRDPAVSFTEFLGPVYKECVDPHWRPQAKRMPAKYWSYINFVGHLDHGVEKDAQRLLTQIGAWDDYGANGW-PSGSI--------FANNHAHHATAAKDNVVHYYTPEL-ERVAETLHKIDY-MHPKLGFRNE 306
BLAST of mRNA_H-canaliculatus_F_contig1530.3936.1 vs. uniprot
Match: A0A7S2WKE2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WKE2_9STRA) HSP 1 Score: 109 bits (273), Expect = 4.150e-24 Identity = 63/148 (42.57%), Postives = 81/148 (54.73%), Query Frame = 1
Query: 715 PAMASSILNDPTWTKGVFLRDPAERLLSCFLDKI---VHRKS-YSVSVFGANDYLSFEKFVA-LTSKGAQQRFHSQYPRGNLGLSRKSNPHWRPQL-FFGLDKFLPYLDFIGDFKHVGAHSEAFLKRAGLWEEFGASGWGPSGEASFF 1140
PA A IL DP++ KGVF RDP RLLSC+LDK HR + YS+ +FG N LSF +F+ +T+ GA N HWRPQ +++ F G+F+ + H AFL +AGLW+EFG SGWGP S F
Sbjct: 12 PARAMEILQDPSFIKGVFFRDPFSRLLSCYLDKFSAGTHRANKYSLKIFGDNHLLSFPEFLKKVTAAGAPM-----------------NVHWRPQADICQIEELFHLYSFFGNFERLPEHGRAFLTQAGLWKEFGESGWGPGENVSMF 142 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1530.3936.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1530.3936.1 >prot_H-canaliculatus_F_contig1530.3936.1 ID=prot_H-canaliculatus_F_contig1530.3936.1|Name=mRNA_H-canaliculatus_F_contig1530.3936.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=433bp MGVVRLAWIPGDPCLCVDAPGLVGEACRGWLISRAADSSSRGDGQKMPAVback to top mRNA from alignment at H-canaliculatus_F_contig1530:1603..8845+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1530.3936.1 ID=mRNA_H-canaliculatus_F_contig1530.3936.1|Name=mRNA_H-canaliculatus_F_contig1530.3936.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=7243bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1530:1603..8845+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1530:1603..8845+ >mRNA_H-canaliculatus_F_contig1530.3936.1 ID=mRNA_H-canaliculatus_F_contig1530.3936.1|Name=mRNA_H-canaliculatus_F_contig1530.3936.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2598bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1530:1603..8845+ (Hapterophycus canaliculatus Oshoro5f female)back to top |