mRNA_H-canaliculatus_F_contig1527.3918.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1527.3918.1 vs. uniprot
Match: D7FWB4_ECTSI (Putative ATP-dependent proteinase, possible LON protease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWB4_ECTSI) HSP 1 Score: 261 bits (666), Expect = 3.060e-86 Identity = 124/137 (90.51%), Postives = 131/137 (95.62%), Query Frame = 1
Query: 1 MPGSVRTEMPVFMLDVSACPGGVVPLHIFEMRYRQMFNDIGTKDNRFGMLVSDPTTGRPCKYGAVMECAQRKLLPDGRQYVLNQAVERFRVLKVLKSVPYTVMEVEVGIPDNKPLDGEPSKWGADEGTRLEDLELEV 411
MPGS +TE+PVFMLD+SACPGGVVPLHIFEMRYRQMFNDIGT DNRFGMLV+D TGRPCKYGAVMECAQRKLLPDGRQYVLNQAVERFRVLKVLK+ PYTVMEVEVGIPDNKPL+GEP KWGA+EGTRLEDLELEV
Sbjct: 1 MPGSTKTELPVFMLDMSACPGGVVPLHIFEMRYRQMFNDIGTTDNRFGMLVTDAKTGRPCKYGAVMECAQRKLLPDGRQYVLNQAVERFRVLKVLKTNPYTVMEVEVGIPDNKPLEGEPVKWGAEEGTRLEDLELEV 137
BLAST of mRNA_H-canaliculatus_F_contig1527.3918.1 vs. uniprot
Match: A0A836CM26_9STRA (PUA-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM26_9STRA) HSP 1 Score: 124 bits (310), Expect = 6.070e-32 Identity = 57/117 (48.72%), Postives = 80/117 (68.38%), Query Frame = 1
Query: 4 PGSVRTEMPVFMLDVSACPGGVVPLHIFEMRYRQMFNDIGTKDNRFGMLVSDPTTGRPCKYGAVMECAQRKLLPDGRQYVLNQAVERFRVLKVLKSVPYTVMEVEVGIPDNKPLDGE 354
PG+ E+P+F L + CP G PLHIFEMRYRQ+ N+I +DNRFG+++ DP T + G V+E +R LLPDGRQ V+N ERF++L+V + PY V VE+G+ D +P +G+
Sbjct: 69 PGAKTRELPIFPLSLVTCPNGKCPLHIFEMRYRQLMNNIAGQDNRFGIIMFDPNTQQIAGVGTVVEVVERSLLPDGRQLVMNIGRERFKLLRVTQEKPYMVGLVELGLVDEEPEEGQ 185
BLAST of mRNA_H-canaliculatus_F_contig1527.3918.1 vs. uniprot
Match: A0A7S2V5P8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5P8_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.860e-24 Identity = 52/112 (46.43%), Postives = 71/112 (63.39%), Query Frame = 1
Query: 22 EMPVFMLDVSACPGGVVPLHIFEMRYRQMFNDIGTKDNRFGMLVSDPTTGRPCKYGAVMECAQRKLLPDGRQYVLNQAVERFRVLKVLKSVPYTVMEVEVGIPDNKPLDGEP 357
++P+F L + A P G PL I+EMRYR+M NDI KD +FGM + D G G +M QR LL DGRQ ++N+ VERFR+L++ + PYT+ VE+ I D+ L G P
Sbjct: 110 DLPLFPLGMVAAPFGKCPLQIYEMRYRRMMNDIQKKDEKFGMAMVDNRNGGLMSVGTIMRVTQRSLLEDGRQLIVNEGVERFRILELKQQKPYTIAAVEI-IDDDMDLHGVP 220
BLAST of mRNA_H-canaliculatus_F_contig1527.3918.1 vs. uniprot
Match: A0A5J4YJ93_PORPP (LON peptidase N-terminal domain and RING finger protein 3 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YJ93_PORPP) HSP 1 Score: 97.8 bits (242), Expect = 2.120e-21 Identity = 47/106 (44.34%), Postives = 65/106 (61.32%), Query Frame = 1
Query: 1 MPGSVRTEMPVFMLDVSACPGGVVPLHIFEMRYRQMFNDIGTKDNRFGMLVSDPTTGRPCKYGAVMECAQRKLLPDGRQYVLNQAVERFRVLKVLKSVPYTVMEVE 318
+P E+P+F L + P +VPLHIFEMRYR+MF I KDN FG+++ D + R + G EC + +L DGR V+NQ +RFR++KVL+ PY VE
Sbjct: 113 LPTGRLVELPLFPLGLVLYPKALVPLHIFEMRYRRMFGQIREKDNMFGIVMYDSSRKRMARVGCSAECQKVQLQDDGRMLVINQGQQRFRIIKVLQEAPYITALVE 218
BLAST of mRNA_H-canaliculatus_F_contig1527.3918.1 vs. uniprot
Match: A0A7S1TD37_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TD37_9RHOD) HSP 1 Score: 84.7 bits (208), Expect = 3.640e-17 Identity = 46/120 (38.33%), Postives = 64/120 (53.33%), Query Frame = 1
Query: 7 GSVRTEMPVFMLDVSACPGGVVPLHIFEMRYRQMFNDIGTKDNRFGMLVSDPTTGRPCKYGAVMECAQRKLLPDGRQYVLNQAVERFRVLKVLKSVPYTVMEVEVGIPDNKPLDGEPSKW 366
G E+P+F L + P G +PLHIFEMRYR MFN I D+RFG+++ D + G V E + + LPDGR + ERFR+L+ K PY + V+ + P+D W
Sbjct: 43 GGETFELPLFPLGLVLHPRGNLPLHIFEMRYRLMFNRIWDGDSRFGIVMYDRERDCVARVGCVAEVQRFEPLPDGRILTNSNGKERFRILRYEKKEPYIIATVQAIKDEEDPVDEMVELW 162
BLAST of mRNA_H-canaliculatus_F_contig1527.3918.1 vs. uniprot
Match: R7QBJ2_CHOCR (Lon N-terminal domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBJ2_CHOCR) HSP 1 Score: 84.3 bits (207), Expect = 1.180e-16 Identity = 41/101 (40.59%), Postives = 61/101 (60.40%), Query Frame = 1
Query: 16 RTEMPVFMLDVSACPGGVVPLHIFEMRYRQMFNDIGTKDNRFGMLVSDPTTGRPCKYGAVMECAQRKLLPDGRQYVLNQAVERFRVLKVLKSVPYTVMEVE 318
+ E+P+F L + PG VPLH+FE+RYR +FN I D+RFG+++ +P + G E + + LPDGR N ERFR+L++++ PYT VE
Sbjct: 37 QRELPLFPLRMVLNPGTPVPLHVFELRYRLLFNRIRDTDSRFGIVMYNPDSSSLASIGCAAELTRFEPLPDGRIMTNNIGRERFRILRIIEEKPYTRAVVE 137
BLAST of mRNA_H-canaliculatus_F_contig1527.3918.1 vs. uniprot
Match: A0A5B6ZLN2_DAVIN (Putative LON peptidase N-terminal domain and RING finger protein 3-like n=3 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B6ZLN2_DAVIN) HSP 1 Score: 82.8 bits (203), Expect = 2.190e-16 Identity = 45/111 (40.54%), Postives = 65/111 (58.56%), Query Frame = 1
Query: 22 EMPVFMLDVSACPGGVVPLHIFEMRYRQMFNDIGTKDNRFGMLVSDPTTGRPCKYGAVMECAQRKLLPDGRQYVLNQAVERFRVLKVLKSVPYTVMEVEVGIPDNKPLDGE 354
E+P+F L + PG ++PL IFE RYR M + + D RFG++ SDP TG G V E + + L D R +++ + ERFRV K++++ PY V EV + D DGE
Sbjct: 74 ELPLFPLPLVLFPGAILPLQIFEFRYRMMMHTLLQTDLRFGVIYSDPATGT-ADVGCVGEVVKHEKLVDDRFFLICKGQERFRVTKLVRTEPYLVAEV-TWLEDRPSADGE 182
BLAST of mRNA_H-canaliculatus_F_contig1527.3918.1 vs. uniprot
Match: A0A2W4I383_9BACT (ATP-dependent protease n=1 Tax=Candidatus Melainabacteria bacterium TaxID=2052166 RepID=A0A2W4I383_9BACT) HSP 1 Score: 81.3 bits (199), Expect = 2.850e-16 Identity = 42/107 (39.25%), Postives = 64/107 (59.81%), Query Frame = 1
Query: 4 PGSVRT-EMPVFML-DVSACPGGVVPLHIFEMRYRQMFNDIGTKDNRFGMLVSDPTTGRPCKYGAVMECAQRKLLPDGRQYVLNQAVERFRVLKVLKSVPYTVMEVE 318
P SV E+P+F L DV PG +PLHIFE RYR M N + D +FG+L+ +PT + G E + L DGR ++ ++RFR++++++ +PY V +VE
Sbjct: 4 PSSVSVCELPLFPLPDVVLFPGRPLPLHIFEDRYRLMINTVLEGDKKFGVLLWNPTISKSVNIGCAAEIGEVVKLKDGRMNIMTLGLQRFRIVEIVRQLPYLVGKVE 110
BLAST of mRNA_H-canaliculatus_F_contig1527.3918.1 vs. uniprot
Match: A0A7C9F995_OPUST (Lon N-terminal domain-containing protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9F995_OPUST) HSP 1 Score: 82.0 bits (201), Expect = 4.590e-16 Identity = 50/137 (36.50%), Postives = 73/137 (53.28%), Query Frame = 1
Query: 1 MPGSVRTEMPVFMLDVSACPGGVVPLHIFEMRYRQMFNDIGTKDNRFGMLVSDPTTGRPCKYGAVMECAQRKLLPDGRQYVLNQAVERFRVLKVLKSVPYTVMEVEVGIPDNKPLDGEPSKWGADEGTRLEDLELEV 411
+P + E+P+F L + PG V+PL IFE RYR M + + D RFG++ SDP G G V E + + L D R +++ + ERFR+ K+ ++ PY V V+ L+ +PS D G LE L EV
Sbjct: 68 IPANDVVELPIFPLPLVLFPGAVLPLQIFEFRYRIMMHTLLQTDLRFGVVFSDPLAGGIAAVGCVGEVVKHEGLSDDRFFLICKGQERFRITKIARTKPYLVAAVDW-------LEDKPSP---DSGDNLEALAKEV 194
BLAST of mRNA_H-canaliculatus_F_contig1527.3918.1 vs. uniprot
Match: A0A7J7ID69_9RHOD (LON peptidase N-terminal domain and RING finger protein 3 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ID69_9RHOD) HSP 1 Score: 82.4 bits (202), Expect = 7.760e-16 Identity = 44/99 (44.44%), Postives = 55/99 (55.56%), Query Frame = 1
Query: 22 EMPVFMLDVSACPGGVVPLHIFEMRYRQMFNDIGTKDNRFGMLVSDPTTGRPCKYGAVMECAQRKLLPDGRQYVLNQAVERFRVLKVLKSVPYTVMEVE 318
E+P+F L + PG +PLHIFEMRYRQMF I D RFG+++ D G + E + LPDGR + +RFRVLK K PY V VE
Sbjct: 130 ELPLFPLPLVLSPGQPIPLHIFEMRYRQMFQRIRDGDGRFGIVMFDKDRNAHATIGTMAEITVYEPLPDGRIMTSSTGRQRFRVLKYTKESPYLVGLVE 228 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1527.3918.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1527.3918.1 >prot_H-canaliculatus_F_contig1527.3918.1 ID=prot_H-canaliculatus_F_contig1527.3918.1|Name=mRNA_H-canaliculatus_F_contig1527.3918.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=137bp MPGSVRTEMPVFMLDVSACPGGVVPLHIFEMRYRQMFNDIGTKDNRFGMLback to top mRNA from alignment at H-canaliculatus_F_contig1527:23608..25891+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1527.3918.1 ID=mRNA_H-canaliculatus_F_contig1527.3918.1|Name=mRNA_H-canaliculatus_F_contig1527.3918.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2284bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1527:23608..25891+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1527:23608..25891+ >mRNA_H-canaliculatus_F_contig1527.3918.1 ID=mRNA_H-canaliculatus_F_contig1527.3918.1|Name=mRNA_H-canaliculatus_F_contig1527.3918.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=822bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1527:23608..25891+ (Hapterophycus canaliculatus Oshoro5f female)back to top |