mRNA_H-canaliculatus_F_contig1524.3901.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1524.3901.1 vs. uniprot
Match: D7G8F8_ECTSI (RPAP3_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8F8_ECTSI) HSP 1 Score: 504 bits (1298), Expect = 8.620e-168 Identity = 317/544 (58.27%), Postives = 376/544 (69.12%), Query Frame = 1
Query: 1 MSGTGGQPAYANNGPGAAAFRVQNQIRQNAHDMQEYLTELGSWEKSIKKKDRKLSRNATASSSSMHKPRSMPDTDVLPVRHARNAIPVSSGPAPQPFV-TEEPPINAAGTEDTPVGGVRTPVTGMKLKGGNDVNHLMDTKSSVSAAGHTYDKGYDKWAKFDIDAALRSVDQEEAETADKRPGGSSSSDSDTDVEDNQDARRLTPATMVNRS-SQDLR-PPSSPHKMAPATKIRLNQSPKDLEKEERERGNAKFGRGDFEGAVKSYTRCVAMNGKSSLAFSNRAMAYLKLKEFGKAEADTDAALRVDPRHVKSLQRRAVARNALGKHRAALGDLQTAAEIDPSSKQVRKDLNKTLETLKTVMRRAPKSHVKVESVSLPAPKPHGNSAITETDRRGLAPAHPTRPYPRAGNPASAISAINENAPATEDKETVAPFSSVLR--SDTRANSESNLHSYQARTTVEELTEEAGA-INTASPTPAVPANVLSPGQTGPLSAIPVSVASQEERPGDAVSHSSRSADRHAAVGPATETLPAAKVRAALPETT 1614
M+G G AY +GPGAAAFRVQ+QIR+NA DMQEYLT+L SWEKSIKKKD++LSR A + SSS R++PDT P+R + +PVSSGPAPQP T++ + G + G R + GG KSS+SAAGHTYDKGY KWAKFDIDAALRSVDQEE E + + S NQ RLTPATMV+RS S+ LR PP H +AP + R +QSP+DLEKEERE+GN KFG+GDFEGAVKSYTRC+ MN KSSLAFSNRAMA LKLKEFGKAE+D DAALRVDPRHVKSLQ+RA ARNALGKHRAALGDLQTAAEIDP+SKQVRKDL+KTLETLKTV+RRAPK+HV+VES LPAPKP G S G+ P N +A+SA N NA T D++T AP+SSVL+ +D RA +E+ ++SYQART VEEL +EA A + T PTP P N +S Q+ PL ++VA+Q ER GDAV S DR V PA +T A V +L +TT
Sbjct: 1 MTGKGDHDAYGKDGPGAAAFRVQHQIRRNAQDMQEYLTDLSSWEKSIKKKDKQLSRKAMSESSSSGNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPTQKLSAKSLGCRNDGADG-RPHINVNAANGGGATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSXXXXXXXXXXKNQGTPRLTPATMVDRSCSRGLRRPPPPKHTVAPTSTSRSSQSPRDLEKEEREKGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQQRAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLSKTLETLKTVVRRAPKTHVRVESFPLPAPKPRGYSQPGTPIEEGVPPT--------VAN--AAVSATNHNASVTGDEDTAAPYSSVLQESTDKRATNEATVYSYQARTIVEELPDEAEATLATPIPTPRAPTNAVSSVQSVPLPTASIAVAAQNERGGDAVPRSYGRVDRDITVDPAGDTPKIATVEGSLTKTT 533
BLAST of mRNA_H-canaliculatus_F_contig1524.3901.1 vs. uniprot
Match: K3WL17_GLOUD (RPAP3_C domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WL17_GLOUD) HSP 1 Score: 172 bits (436), Expect = 1.310e-43 Identity = 129/370 (34.86%), Postives = 185/370 (50.00%), Query Frame = 1
Query: 31 ANNGPGAAAFRVQNQIRQNAHDMQEYLTELGSWEKSIKKKDRKLSRNATASSSSMHKPRSMPDTDVLPVRHARNAIPVSSGPAPQPFVTEEPPINAAGTEDTPVGGVRTPVTGMKLKGGNDVNHLMDTKSSVSAAGHTYDKGYDKWAKFDIDAALRSVDQEEAETADKRPGGSSSSDSDTDVEDNQDARRLTPATMVNRSSQDLRPPSSPHKMAPATKIRLNQSPKDLEKEERERGNAKFGRGDFEGAVKSYTRCVAMNGKSSLAFSNRAMAYLKLKEFGKAEADTDAALRVDPRHVKSLQRRAVARNALGKHRAALGDLQTAAEIDPSSKQVRKDLNKTLETLKTVMRRAPK-SHVKVESVSLPAPKPH 1137
A +G A+ +VQ+QIR NA +Q+Y ++L SWEKSI +++ R+ P R + A T+ TPV +G D + + AGHTYDKGY KWAKFD+DAALR D++ S+S L+ +V ++ PA K + + K E+ ERE GNA + RGD+ A+K YTRC+ N +++ SNRAMA+LK +EFGKAE D + AL++DP H+KSL RR ARN+LGKHR AL D + AAE+DP S+Q++ + T E ++T ++RAPK + K+E + +PH
Sbjct: 2 AASGASASTLQVQHQIRANAAQLQDYFSDLYSWEKSINEEEXXXXXXXXXXXXXXXXXRA-------PRRRVQQA-----------------------TDATPV------------EGDGDSANDKGAAAKADPAGHTYDKGYSKWAKFDVDAALREADED-----------STSXXXXXXXXXXXXXXXLSSKAVVVEETE------------PAAKA--SATTKSREELEREDGNAHYQRGDYVAAIKCYTRCLGYNPHNAVVLSNRAMAHLKNREFGKAEEDCNLALKIDPSHLKSLSRRGTARNSLGKHRLALLDFERAAELDPKSRQIQTQIASTRELIRTAIKRAPKRTQFKIEVIGETTNEPH 304
BLAST of mRNA_H-canaliculatus_F_contig1524.3901.1 vs. uniprot
Match: A0A6A4EVA2_9STRA (RPAP3_C domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EVA2_9STRA) HSP 1 Score: 164 bits (416), Expect = 6.810e-41 Identity = 120/342 (35.09%), Postives = 166/342 (48.54%), Query Frame = 1
Query: 64 VQNQIRQNAHDMQEYLTELGSWEKSIKKKDRKLSRNATASSSSMHKPRSMPDTDVLPVRHARNAIPVSSGPAPQPFVTEEPPINAAGTEDTPVGGVRTPVTGMKLKGGNDVNHLMDTKSSVSAAGHTYDKGYDKWAKFDIDAALRSVDQEEAETADKRPGGSSSSDSDTDVEDNQDARRLTPATMVNRSSQDLRPPSSPHKMAPATKIRLNQSPKDLEKEERERGNAKFGRGDFEGAVKSYTRCVAMNGKSSLAFSNRAMAYLKLKEFGKAEADTDAALRVDPRHVKSLQRRAVARNALGKHRAALGDLQTAAEIDPSSKQVRKDLNKTLETLKTVMRRAPK 1089
VQ+QIR NA +Q+Y ++L +WEKSI K+D R A T + P A G P G + G N D + HTYDKGY++W KFD+DAAL+ D E+A T K G++S ++ + RR+ A+ +S ++L E+E GNA + RGD+ A+KSYTRC+ N ++++ SNRAMAYLK +EF AE D AL+ DP HVKS RR ARN+LGKHR AL D Q AA +DP S+Q++ + T E ++T ++RAPK
Sbjct: 14 VQHQIRANASQLQDYFSDLYAWEKSIGKEDSARKRAAK---------------------------------------TTKKPATA---------GATPPPRGARGNGVGRNNEAADGVNGKKPDSHTYDKGYNRWEKFDVDAALKEAD-EDAST--KTKSGAAS----PPLQSSPVPRRVVAASPSTKSREEL---------------------------EKEGGNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKADPLHVKSYSRRGTARNSLGKHRLALLDFQQAATLDPKSRQIQTQVQSTRELIRTAIKRAPK 273
BLAST of mRNA_H-canaliculatus_F_contig1524.3901.1 vs. uniprot
Match: A0A329RPX3_9STRA (RPAP3_C domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RPX3_9STRA) HSP 1 Score: 165 bits (417), Expect = 7.400e-41 Identity = 120/347 (34.58%), Postives = 173/347 (49.86%), Query Frame = 1
Query: 49 AAAFRVQNQIRQNAHDMQEYLTELGSWEKSIKKKDRKLSRNATASSSSMHKPRSMPDTDVLPVRHARNAIPVSSGPAPQPFVTEEPPINAAGTEDTPVGGVRTPVTGMKLKGGNDVNHLMDTKSSVSAAGHTYDKGYDKWAKFDIDAALRSVDQEEAETADKRPGGSSSSDSDTDVEDNQDARRLTPATMVNRSSQDLRPPSSPHKMAPATKIRLNQSPKDLEKEERERGNAKFGRGDFEGAVKSYTRCVAMNGKSSLAFSNRAMAYLKLKEFGKAEADTDAALRVDPRHVKSLQRRAVARNALGKHRAALGDLQTAAEIDPSSKQVRKDLNKTLETLKTVMRRAPK 1089
++ VQ+QIR NA +Q+Y ++L +WE +I K++ R + SS+ A NA AP P V + + G E L GN+ +D HTYDKGY +W KFD+DAAL+ D+E A + + S+ + S+P ++A +K + + K E+ E+E GNA + RGD+ A+KSYTRC+ N ++++ SNRAMAYLK +EF AE D AL+ DP HVKS RR ARN+LGKHR AL D Q AA +DP S+Q++ L T E ++T ++R+PK
Sbjct: 27 SSVVEVQHQIRANASQLQDYFSDLYAWEMTIDKENSARKRATKTAKSSV----------------AANA-------APPPRVATIVGVGSNGEE---------------LYAGNEKK--LDE--------HTYDKGYKRWDKFDVDAALKEADEE--------------------------AGIRQKSEQASASASEQSSGSAPLRVATTSKASTSSTTKSREELEKEEGNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKADPTHVKSYSRRGTARNSLGKHRLALLDFQHAATLDPKSRQIQTQLQSTRELIRTAIKRSPK 299
BLAST of mRNA_H-canaliculatus_F_contig1524.3901.1 vs. uniprot
Match: A0A081B1U1_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica P1976 TaxID=1317066 RepID=A0A081B1U1_PHYPR) HSP 1 Score: 160 bits (404), Expect = 3.510e-40 Identity = 119/346 (34.39%), Postives = 165/346 (47.69%), Query Frame = 1
Query: 52 AAFRVQNQIRQNAHDMQEYLTELGSWEKSIKKKDRKLSRNATASSSSMHKPRSMPDTDVLPVRHARNAIPVSSGPAPQPFVTEEPPINAAGTEDTPVGGVRTPVTGMKLKGGNDVNHLMDTKSSVSAAGHTYDKGYDKWAKFDIDAALRSVDQEEAETADKRPGGSSSSDSDTDVEDNQDARRLTPATMVNRSSQDLRPPSSPHKMAPATKIRLNQSPKDLEKEERERGNAKFGRGDFEGAVKSYTRCVAMNGKSSLAFSNRAMAYLKLKEFGKAEADTDAALRVDPRHVKSLQRRAVARNALGKHRAALGDLQTAAEIDPSSKQVRKDLNKTLETLKTVMRRAPK 1089
+ VQ+QIR NA +Q+Y ++L +WEK+I K+D R A + S P PP A + G+ G + T + HTYDKGY +W KFD+DAAL+ D++E + +S S T R+T + + +S TK R ++LEKEE GNA + RGD+ A+KSYTRC+ N ++++ SNRAMAYLK +EF AE D AL+ DP HVKS RR ARNALGKHR AL D AA +DP S+Q++ L T ++T ++R+PK
Sbjct: 8 SVVEVQHQIRANASQLQDYFSDLYAWEKTIHKEDSARKRAAKTAKS--------------------------------PTAIAAPPPRTA------------TIIGVDSNG-----EKVSTANEKKLDAHTYDKGYKRWEKFDVDAALKEADEDEGNKRQNKQQSASVQASGTGPS------RVTATSNIPAAST-------------TTKTR-----EELEKEE---GNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKSDPAHVKSYSRRGTARNALGKHRLALLDFHRAAMLDPKSRQIQTQLQSTRNVIRTAIKRSPK 277
BLAST of mRNA_H-canaliculatus_F_contig1524.3901.1 vs. uniprot
Match: W2RGZ7_PHYPN (RPAP3_C domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2RGZ7_PHYPN) HSP 1 Score: 160 bits (404), Expect = 3.210e-39 Identity = 119/346 (34.39%), Postives = 165/346 (47.69%), Query Frame = 1
Query: 52 AAFRVQNQIRQNAHDMQEYLTELGSWEKSIKKKDRKLSRNATASSSSMHKPRSMPDTDVLPVRHARNAIPVSSGPAPQPFVTEEPPINAAGTEDTPVGGVRTPVTGMKLKGGNDVNHLMDTKSSVSAAGHTYDKGYDKWAKFDIDAALRSVDQEEAETADKRPGGSSSSDSDTDVEDNQDARRLTPATMVNRSSQDLRPPSSPHKMAPATKIRLNQSPKDLEKEERERGNAKFGRGDFEGAVKSYTRCVAMNGKSSLAFSNRAMAYLKLKEFGKAEADTDAALRVDPRHVKSLQRRAVARNALGKHRAALGDLQTAAEIDPSSKQVRKDLNKTLETLKTVMRRAPK 1089
+ VQ+QIR NA +Q+Y ++L +WEK+I K+D R A + S P PP A + G+ G + T + HTYDKGY +W KFD+DAAL+ D++E + +S S T R+T + + +S TK R ++LEKEE GNA + RGD+ A+KSYTRC+ N ++++ SNRAMAYLK +EF AE D AL+ DP HVKS RR ARNALGKHR AL D AA +DP S+Q++ L T ++T ++R+PK
Sbjct: 8 SVVEVQHQIRANASQLQDYFSDLYAWEKAIHKEDSARKRAAKTAKS--------------------------------PTAIAAPPPRTA------------TIIGVDSNG-----EKVSTANEKKLDAHTYDKGYKRWEKFDVDAALKEADEDEGNKRQNKQQSASVQASGTGPS------RVTATSNIPAAST-------------TTKTR-----EELEKEE---GNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKSDPAHVKSYSRRGTARNALGKHRLALLDFHRAAMLDPKSRQIQTQLQSTRNVIRTAIKRSPK 277
BLAST of mRNA_H-canaliculatus_F_contig1524.3901.1 vs. uniprot
Match: D0MU02_PHYIT (RNA polymerase II-associated protein, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MU02_PHYIT) HSP 1 Score: 158 bits (400), Expect = 6.410e-39 Identity = 123/344 (35.76%), Postives = 170/344 (49.42%), Query Frame = 1
Query: 64 VQNQIRQNAHDMQEYLTELGSWEKSIKKKDRKLSRNATASSSSMHKPRSMPDTDVLPVRHARNAIPVSSGPAPQPFVTEEPPINAAGTEDTPVGGVRTPVTGMKLKGGNDVNHLMDTKSSVSAAGHTYDKGYDKWAKFDIDAALRSVDQE-EAETADKRPGGSSSSDSDTDVEDNQDARRLTPATMVNRSSQDLRPPSSPHKMAPAT-KIRLNQSPKDLEKEERERGNAKFGRGDFEGAVKSYTRCVAMNGKSSLAFSNRAMAYLKLKEFGKAEADTDAALRVDPRHVKSLQRRAVARNALGKHRAALGDLQTAAEIDPSSKQVRKDLNKTLETLKTVMRRAPK 1089
+Q+QIR NA +Q+Y ++L +WEKSI K+D R + SS P AP P V T VG G +D N + + A HTYDKGY +W KFD+D AL+ D+E + + +K+P + +V S S+P MA + +S ++LEKEE GNA + RGD+ A+KSYTRC+ N ++++ SNRAMAYLK +E+ AE D ALR DP H KS RR ARN+LGKHR AL D Q AA +DP S+Q++K L T E ++T ++R+ K
Sbjct: 7 MQHQIRANASQLQDYFSDLYAWEKSIDKEDSMRKRATKTAKSSATPPA-----------------------APPPRVA------------TTVG-----------VGSSDENARTVSLKKLDA--HTYDKGYKRWEKFDVDTALKEADEEGDCKQKNKQP-----------------------SALVQPSG------SAPTAMAKTSVSSTTTKSREELEKEE---GNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREYANAEDDCSLALRADPAHAKSCTRRGTARNSLGKHRLALLDFQRAATLDPKSRQIQKQLQSTRELIRTAIKRSSK 270
BLAST of mRNA_H-canaliculatus_F_contig1524.3901.1 vs. uniprot
Match: A0A8K1FBG6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBG6_PYTOL) HSP 1 Score: 157 bits (398), Expect = 1.620e-38 Identity = 123/347 (35.45%), Postives = 167/347 (48.13%), Query Frame = 1
Query: 52 AAFRVQNQIRQNAHDMQEYLTELGSWEKSIKKKDRKLSRNATASSSSMHKPRSMPDTDVLPVRHARNAIPVSSGPAPQPFVTEEPPINAAGTEDTPVGGVRTPVTGMKLKGGNDVNHLMDTKSSVSAAGHTYDKGYDKWAKFDIDAALRSVDQEEAETADKRPGGSSSSDSDTDVEDNQDARRLTPATMVNRSSQDLRPPSSPHKMAPATKIRLNQSP-KDLEKEERERGNAKFGRGDFEGAVKSYTRCVAMNGKSSLAFSNRAMAYLKLKEFGKAEADTDAALRVDPRHVKSLQRRAVARNALGKHRAALGDLQTAAEIDPSSKQVRKDLNKTLETLKTVMRRAPK 1089
+ +VQ QIR NA ++Q+Y ++L +WEK+I+KK+ A + +P+ + VS P P PV G K A HTYDKGY KW KFD+DAAL+ D + + A+K Q A+ T T S P K A K ++ P K E ERE GN + RGD+ A+KSYTRC+ N ++++ SNRAMAYLK +E+ KAE D AL++D HVKS RR ARNALGKHR AL D + A E+DP SKQ+ + T E+++T ++RAPK
Sbjct: 16 SVLQVQQQIRANASELQDYFSDLYAWEKTIQKKEEATKSTAMTKQN-------------VPLPRGQKTATVSLTPISAPEAI-------------------APVEGPTKK----------------ADAHTYDKGYKKWDKFDVDAALQEADGDHS--AEK-----------------QSAQAETTTT------------SLPTKKVVA-KPKIGSVPTKSREDIEREEGNEHYKRGDYVAAIKSYTRCLGFNSQNAIVLSNRAMAYLKNREYKKAENDCTLALKIDSAHVKSYSRRGTARNALGKHRLALLDFERARELDPKSKQLLTQIASTKESMRTAIKRAPK 282
BLAST of mRNA_H-canaliculatus_F_contig1524.3901.1 vs. uniprot
Match: H3GE50_PHYRM (RPAP3_C domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GE50_PHYRM) HSP 1 Score: 154 bits (390), Expect = 2.700e-37 Identity = 126/374 (33.69%), Postives = 173/374 (46.26%), Query Frame = 1
Query: 64 VQNQIRQNAHDMQEYLTELGSWEKSIKKKDRKLSRNATASSSSMHKPRSMPDTDVLPVRHARNAIPVSSGPAPQPFVTEEPPINAAGTEDTPVGGVRTPVTGMKLKGGNDVNHLMDTKSSVSAAGHTYDKGYDKWAKFDIDAALRSVDQEEAETADKRPGGSSSSDSDTDVEDNQDARRLTPATMVNRSSQDLRPPSSPHKMAPATKIRLNQSPKDLEKEERERGNAKFGRGDFEGAVKSYTRCVAMNGKSSLAFSNRAMAYLKLKEFGKAEADTDAALRVDPRHVKSLQRRAVARNALGKHRAALGDLQTAAEIDPSSKQVRKDLNKTLETLKTVMRRAPKS---HVKVESVSLPAPKPHGNSAITETDRRGL 1176
VQ+QIR NA +Q+Y ++L +WEKSI K+D R A + S D P + V + +E + G D HTYDKGY +W KFD+DAALR D GG S+ VED +PA+ V R +S ++LEKEE GNA + RGD+ AVKSYTRC+ N ++++ SNRAMAYLK +EF AE D AL+ +P HVKS RR ARN+LGKHR AL D AA +DP S+Q++ L T + ++T ++R+PK ++V S G+ A+ + + GL
Sbjct: 9 VQHQIRSNASQLQDYFSDLYAWEKSIDKEDSARKRAARTTKS----------LDATPPPRTATVVGVGNN-----------------SESSGEG---------------------DATDGKQPGAHTYDKGYKRWEKFDVDAALREAD-----------GGGSAVPI---VED-------SPASSVPRRVXXX--------XXXXXXXXXTKSREELEKEE---GNAHYKRGDYVAAVKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKANPTHVKSFSRRGTARNSLGKHRLALLDFHRAAMLDPKSRQIQTQLQSTRDLIRTAIKRSPKRTQFSIEVVGESCLVKPEVGSEALEDKENLGL 302
BLAST of mRNA_H-canaliculatus_F_contig1524.3901.1 vs. uniprot
Match: A0A1V9YWT7_9STRA (RNA polymerase II-associated protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YWT7_9STRA) HSP 1 Score: 154 bits (389), Expect = 1.490e-36 Identity = 119/363 (32.78%), Postives = 173/363 (47.66%), Query Frame = 1
Query: 55 AFRVQNQIRQNAHDMQEYLTELGSWEKSIKKKDRKLSRNATASSSSMHKPRSMPDTDVLPVRHARNAIPVSSGPAPQPFVTEEPPINAAGTEDT-----PVGGVRTPVTGMKLKGGNDVNHLMDTKSSVSAAGHTYDKGYDKWAKFDIDAALRSVDQEEAETADKRPGGSSSSDSDTDVEDNQDARRLTP--ATMVNRSSQDLRPPSSPHKMAPATKIRLNQSPKDLEKEERERGNAKFGRGDFEGAVKSYTRCVAMNGKSSLAFSNRAMAYLKLKEFGKAEADTDAALRVDPRHVKSLQRRAVARNALGKHRAALGDLQTAAEIDPSSKQVRKDLNKTLETLKTVMRRAPKSHVKVESVSLP 1122
A VQ+QIR+NA +Q+Y +++ WEKS+ KK+ L N T P RN + +N G+ED+ P+ + TP +H +S + A H YDKGY KW FD++AAL+ VD+ + ++P V D +++ A + R S+++ LEKE GNA F G++ AVK YTR + N ++++ SNRAMA+LKLKE+ KAE DT A+++D HVKS RRA ARNALGKH AL DL+ A ++P +K + + T ETLK ++RAP + V + P
Sbjct: 3 AIAVQHQIRENAAYLQDYYSDMKLWEKSMAKKELSLKSN----------------TKKAPPVRVRNTV----------------AVNVRGSEDSVSIQHPINAILTP------------SH----ESKAAPASHVYDKGYTKWDTFDVEAALKEVDEPSVKKTVEQP-----------VVDTPPKKKVVTKNAPTIPRVSREV-----------------------LEKEN---GNAHFKAGEYAAAVKCYTRSLGYNPRNAIVLSNRAMAHLKLKEYLKAEQDTTLAIQIDANHVKSYSRRATARNALGKHHLALLDLEAALALEPQNKTIHAQVKSTRETLKLSIKRAPLQSIPVTIIHPP 280 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1524.3901.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1524.3901.1 >prot_H-canaliculatus_F_contig1524.3901.1 ID=prot_H-canaliculatus_F_contig1524.3901.1|Name=mRNA_H-canaliculatus_F_contig1524.3901.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=565bp MSGTGGQPAYANNGPGAAAFRVQNQIRQNAHDMQEYLTELGSWEKSIKKKback to top mRNA from alignment at H-canaliculatus_F_contig1524:21492..26024+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1524.3901.1 ID=mRNA_H-canaliculatus_F_contig1524.3901.1|Name=mRNA_H-canaliculatus_F_contig1524.3901.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4533bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1524:21492..26024+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1524:21492..26024+ >mRNA_H-canaliculatus_F_contig1524.3901.1 ID=mRNA_H-canaliculatus_F_contig1524.3901.1|Name=mRNA_H-canaliculatus_F_contig1524.3901.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3390bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1524:21492..26024+ (Hapterophycus canaliculatus Oshoro5f female)back to top |