mRNA_H-canaliculatus_F_contig15232.3898.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig15232.3898.1 vs. uniprot
Match: D8LMD3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD3_ECTSI) HSP 1 Score: 155 bits (391), Expect = 3.630e-42 Identity = 78/82 (95.12%), Postives = 81/82 (98.78%), Query Frame = 1
Query: 1 VHPFAIVGITGIIVNALNLMPIGSLDGGRIAMSAFGRKAGGVLGTITLLLQAISSVFNNYSLQLFWGLLVILFQRGQDLPAK 246
+HP AIVG+TGIIVNALNLMPIGSLDGGRIAMSAFGRKAGGVLGT+TLLLQAISSVFNNYSLQLFWGLLVILFQRGQDLPAK
Sbjct: 671 IHPLAIVGVTGIIVNALNLMPIGSLDGGRIAMSAFGRKAGGVLGTVTLLLQAISSVFNNYSLQLFWGLLVILFQRGQDLPAK 752
BLAST of mRNA_H-canaliculatus_F_contig15232.3898.1 vs. uniprot
Match: A0A835ZIQ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIQ3_9STRA) HSP 1 Score: 128 bits (322), Expect = 5.820e-34 Identity = 59/80 (73.75%), Postives = 71/80 (88.75%), Query Frame = 1
Query: 4 HPFAIVGITGIIVNALNLMPIGSLDGGRIAMSAFGRKAGGVLGTITLLLQAISSVFNNYSLQLFWGLLVILFQRGQDLPA 243
HP A++G TG+IVNALNLMP+G LDGGR+A + FGR+ VLGT+TLLLQA S++FNNYSLQLFWGL+VI+FQRGQDLPA
Sbjct: 272 HPLAVIGFTGVIVNALNLMPVGRLDGGRLAAAGFGRRTAAVLGTLTLLLQAASAIFNNYSLQLFWGLVVIIFQRGQDLPA 351
BLAST of mRNA_H-canaliculatus_F_contig15232.3898.1 vs. uniprot
Match: A0A835ZNX7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZNX7_9STRA) HSP 1 Score: 110 bits (275), Expect = 1.870e-27 Identity = 56/97 (57.73%), Postives = 69/97 (71.13%), Query Frame = 1
Query: 4 HPFAIVGITGIIVNALNLMPIGSLDGGRIAMSAFGRKAGGVLGTITLLLQ-----------------AISSVFNNYSLQLFWGLLVILFQRGQDLPA 243
HP A++G+ G+IVNALNLMP+G LDG R+A + FGR+ VLGT+TLLLQ A S++FNN+SLQLFWGL VI+FQRGQDLPA
Sbjct: 186 HPLAVIGLMGVIVNALNLMPVGRLDGERLAAAGFGRRTAAVLGTLTLLLQIVRHPQRTAAIITHFLDAASAIFNNHSLQLFWGLAVIIFQRGQDLPA 282
BLAST of mRNA_H-canaliculatus_F_contig15232.3898.1 vs. uniprot
Match: M2WYG4_GALSU (Peptidase, M50 family protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WYG4_GALSU) HSP 1 Score: 97.1 bits (240), Expect = 1.120e-21 Identity = 46/82 (56.10%), Postives = 57/82 (69.51%), Query Frame = 1
Query: 1 VHPFAIVGITGIIVNALNLMPIGSLDGGRIAMSAFGRKAGGVLGTITLLLQAISSVFNNYSLQLFWGLLVILFQRGQDLPAK 246
VHP +VG TG+++NALNL+PIG LDGGRI FGR +G ITLLLQ + +V N L LFWG+ V+LFQR DLP +
Sbjct: 509 VHPLTVVGYTGLLINALNLLPIGRLDGGRIVQCIFGRSTASRVGGITLLLQGLGAVLGNSPLLLFWGIFVVLFQREMDLPCE 590
BLAST of mRNA_H-canaliculatus_F_contig15232.3898.1 vs. uniprot
Match: A0A7S2G2S1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G2S1_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 2.080e-21 Identity = 38/82 (46.34%), Postives = 59/82 (71.95%), Query Frame = 1
Query: 1 VHPFAIVGITGIIVNALNLMPIGSLDGGRIAMSAFGRKAGGVLGTITLLLQAISSVFNNYSLQLFWGLLVILFQRGQDLPAK 246
VHP +VG+TG++VNALN MP+G +DGGR + GR + ++G++ LLLQA+S + + +QLFWG+ ++ FQR Q++P
Sbjct: 48 VHPLTVVGLTGLLVNALNFMPVGRIDGGRASTCVLGRPSATIIGSVILLLQALSGLAGDSPIQLFWGITILCFQRSQEIPCN 129
BLAST of mRNA_H-canaliculatus_F_contig15232.3898.1 vs. uniprot
Match: A0A7S2RWG9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RWG9_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 5.210e-20 Identity = 37/82 (45.12%), Postives = 56/82 (68.29%), Query Frame = 1
Query: 1 VHPFAIVGITGIIVNALNLMPIGSLDGGRIAMSAFGRKAGGVLGTITLLLQAISSVFNNYSLQLFWGLLVILFQRGQDLPAK 246
VHP VG+TG++ +A+NL+P+G LDGGR + FGR+ ++ +TL AIS++ N ++ +FWGL V +FQR DLP +
Sbjct: 20 VHPLFFVGLTGLVASAVNLLPVGRLDGGRACTAVFGRRTAFLISLVTLFFMAISAISGNSAISVFWGLFVTMFQRTPDLPTR 101
BLAST of mRNA_H-canaliculatus_F_contig15232.3898.1 vs. uniprot
Match: A0A2V3J2Y1_9FLOR (Putative zinc metalloprotease EGY2, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2Y1_9FLOR) HSP 1 Score: 91.3 bits (225), Expect = 1.180e-19 Identity = 43/82 (52.44%), Postives = 55/82 (67.07%), Query Frame = 1
Query: 1 VHPFAIVGITGIIVNALNLMPIGSLDGGRIAMSAFGRKAGGVLGTITLLLQAISSVFNNYSLQLFWGLLVILFQRGQDLPAK 246
VHP ++G TG++VNALNLMPIG LDGGRI + +GR G +TL LQA+SS+ N L LFWGL+ + QR D P +
Sbjct: 452 VHPLTVIGYTGLLVNALNLMPIGRLDGGRIVQALYGRAIAGRASALTLFLQAVSSLVGNSPLLLFWGLVCVFLQRESDYPCQ 533
BLAST of mRNA_H-canaliculatus_F_contig15232.3898.1 vs. uniprot
Match: A0A7S1TER5_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TER5_9RHOD) HSP 1 Score: 90.9 bits (224), Expect = 1.640e-19 Identity = 41/82 (50.00%), Postives = 56/82 (68.29%), Query Frame = 1
Query: 1 VHPFAIVGITGIIVNALNLMPIGSLDGGRIAMSAFGRKAGGVLGTITLLLQAISSVFNNYSLQLFWGLLVILFQRGQDLPAK 246
VHP +VG TG++VNALN++PIG LDGGR+ S FGR + +T++LQ +SSV N L LFWGL V+ QR ++P +
Sbjct: 504 VHPLVLVGYTGLLVNALNMIPIGRLDGGRVVQSLFGRNTASAVSALTVILQGLSSVLGNSPLLLFWGLAVVFLQREAEIPCQ 585
BLAST of mRNA_H-canaliculatus_F_contig15232.3898.1 vs. uniprot
Match: R7Q4W8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4W8_CHOCR) HSP 1 Score: 89.4 bits (220), Expect = 5.550e-19 Identity = 44/82 (53.66%), Postives = 53/82 (64.63%), Query Frame = 1
Query: 1 VHPFAIVGITGIIVNALNLMPIGSLDGGRIAMSAFGRKAGGVLGTITLLLQAISSVFNNYSLQLFWGLLVILFQRGQDLPAK 246
VHP A+VG TG++ NALNLMPIG LDGGRI + +GR ITLLLQ SS+ N L LFWGL+ + QR D P +
Sbjct: 432 VHPLAVVGYTGLLANALNLMPIGRLDGGRIMQALYGRAVASRATAITLLLQGFSSLLGNSPLLLFWGLVAVFLQRESDYPCR 513
BLAST of mRNA_H-canaliculatus_F_contig15232.3898.1 vs. uniprot
Match: A0A7S0XJC7_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XJC7_9RHOD) HSP 1 Score: 88.2 bits (217), Expect = 1.410e-18 Identity = 41/80 (51.25%), Postives = 54/80 (67.50%), Query Frame = 1
Query: 1 VHPFAIVGITGIIVNALNLMPIGSLDGGRIAMSAFGRKAGGVLGTITLLLQAISSVFNNYSLQLFWGLLVILFQRGQDLP 240
VHP +VG T ++V ALN++P G LDGGRI + FGR G++G +TLLLQ SVF + SL L WGL+ I QR ++P
Sbjct: 428 VHPLVVVGYTSLLVTALNMIPFGRLDGGRIMQAVFGRTTAGIIGGLTLLLQGFGSVFGDNSLLLIWGLIAIFLQRDAEVP 507 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig15232.3898.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig15232.3898.1 >prot_H-canaliculatus_F_contig15232.3898.1 ID=prot_H-canaliculatus_F_contig15232.3898.1|Name=mRNA_H-canaliculatus_F_contig15232.3898.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=82bp VHPFAIVGITGIIVNALNLMPIGSLDGGRIAMSAFGRKAGGVLGTITLLLback to top mRNA from alignment at H-canaliculatus_F_contig15232:182..1180+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig15232.3898.1 ID=mRNA_H-canaliculatus_F_contig15232.3898.1|Name=mRNA_H-canaliculatus_F_contig15232.3898.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=999bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15232:182..1180+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig15232:182..1180+ >mRNA_H-canaliculatus_F_contig15232.3898.1 ID=mRNA_H-canaliculatus_F_contig15232.3898.1|Name=mRNA_H-canaliculatus_F_contig15232.3898.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=492bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15232:182..1180+ (Hapterophycus canaliculatus Oshoro5f female)back to top |