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Homology
BLAST of mRNA_H-canaliculatus_F_contig1522.3891.1 vs. uniprot
Match: D8LH68_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH68_ECTSI) HSP 1 Score: 554 bits (1427), Expect = 2.880e-187 Identity = 457/489 (93.46%), Postives = 472/489 (96.52%), Query Frame = 1
Query: 1 AMETEDPREAPWTVTEFFLDPRRYNPSAPILHKAANADGDTALYVAAKAGHDEAVRALLEVPATKVNWQNHKGITSVSVAAHKGREEIVKMLIAADADVNIDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAMLHPSKQMRLMQDAEVAQRTLVLQRIFNRYTAGKLVVTDTQPDVSGSPSLSMLIRSLISPVSSNRAVFEHIVSFIPLPRLWDTSLDKIRRRCHIDATEAIREAFRIIDEVLADLKFVHGPDHGAHLVRLWEQPALGQHLAQDRHMPPMLVQALRSWGGTQESVTSLAGGEVTFQPRVAMRVVALATELVKWYRAQENSTWHTVDPDIAATCANGAGSGRVDGEIEGESSDGEMD 1467
AMETED REAP TVTEFFLDPRRYNPS+PILHKAANADGDTALYVAAKAGHDEAVRALLEV ATKVNWQNHKGITSVSVAAHKGREEIVKMLI+ADADVNIDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAMLHPSKQMRLMQDAEVA+RTLVLQ++FNRYTAGKL+VT+TQPDVSGS SLSMLIRSLISP+SSNRAVFEHI SFIPLPRLWDTSL+KIRRRCHIDATEAIREAFRIIDEVLADL FVHGPDHG HLVRLWE P+LGQ L QD HMPP+LVQALRSWGGTQESVTSLAGGEVTFQPRVA RVVALATELVKWYR E+ST + VDPDI+A CANGAGSGR+DGEIEGESSDGEMD
Sbjct: 10 AMETEDAREAPLTVTEFFLDPRRYNPSSPILHKAANADGDTALYVAAKAGHDEAVRALLEVQATKVNWQNHKGITSVSVAAHKGREEIVKMLISADADVNIDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAMLHPSKQMRLMQDAEVAERTLVLQKVFNRYTAGKLLVTETQPDVSGSASLSMLIRSLISPISSNRAVFEHIASFIPLPRLWDTSLEKIRRRCHIDATEAIREAFRIIDEVLADLNFVHGPDHGTHLVRLWEHPSLGQRLTQDLHMPPLLVQALRSWGGTQESVTSLAGGEVTFQPRVATRVVALATELVKWYRTHESSTCYIVDPDISAACANGAGSGRLDGEIEGESSDGEMD 498
BLAST of mRNA_H-canaliculatus_F_contig1522.3891.1 vs. uniprot
Match: A0A835YM71_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM71_9STRA) HSP 1 Score: 137 bits (344), Expect = 2.030e-29 Identity = 77/194 (39.69%), Postives = 106/194 (54.64%), Query Frame = 1
Query: 958 RAVFEHIVSFIPLPRLWDTSLDKIRRRCHIDATEAIREAFRIIDEVLADLKFVHGPDHGAHLVRLWEQPALGQHLAQDRHMPPMLVQALRSWGGTQESVTSLAGGEVTFQPRVAMRVVALATELVKWYRAQENSTWHTVDPDIAATCANGAGSGRVD-----------------------GEIEGESSDGEMDS 1470
R +F+ IV F+PLPRLW+ SL ++RRRCHIDA EA+R A +++DEV DL+ GP+ HLV + AL + LA MP L+ +LR W Q L G V ++P VA +VV LATE+ KW R +E +T+DP A+ ++ GSG +E +SSDGEMD+
Sbjct: 701 RGLFDRIVDFVPLPRLWEDSLGRLRRRCHIDANEAVRGALQLVDEVFTDLQIRAGPNQRGHLVAINRSEALAETLATQLGMPRNLLDSLRDWSDIQSLSVRLERG-VNYEPTVASQVVQLATEVCKWNRCREGGREYTLDPVAASILSSTGGSGXXXXXXXXXXXXXXXMPAGADHMEEAAHLESDSSDGEMDA 893
BLAST of mRNA_H-canaliculatus_F_contig1522.3891.1 vs. uniprot
Match: A0A7S3XR05_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XR05_HETAK) HSP 1 Score: 119 bits (298), Expect = 8.380e-27 Identity = 73/186 (39.25%), Postives = 100/186 (53.76%), Query Frame = 1
Query: 904 SPSLSMLIRSLISPVSSNRAVFEHIVSFIPLPRLWDTSLDKIRRRCHIDATEAIREAFRIIDEVLADLKFVHGPDHGAHLVRLWEQPALGQHLAQDRHMPPMLVQALRSWGGTQESVTSLAGGEVTFQPRVAMRVVALATELVKWYRAQENST-WHTVDPDIAATCANGAGSGRVDGEIEGESSDG 1458
+P L R+L + +A+F +V ++PLPRLW T+L K+RRRCHID EA+R IIDEVL DL+ HLV L PA L MP +L L W Q + + G V F P +A++VVALA+EL +WY+ EN T + T DP+ +A + G G + GE +G
Sbjct: 6 APGLPAPQRALALALGLPKALFHRVVRYLPLPRLWATTLVKLRRRCHIDPNEAVRGGLGIIDEVLTDLRISRARAQELHLVLLARDPATQYLLRAQYRMPDLLFGWLAQWSDVQSILARVDRG-VNFTPPIAIQVVALASELHRWYKCHENYTVYSTEDPNNSANVFFSSAPG---GGVIGEGDEG 187
BLAST of mRNA_H-canaliculatus_F_contig1522.3891.1 vs. uniprot
Match: W7T4X0_9STRA (Ankyrin repeat domain-containing protein 50 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T4X0_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 3.290e-15 Identity = 56/137 (40.88%), Postives = 66/137 (48.18%), Query Frame = 1
Query: 928 RSLISPVSSNRAVFEHIVSFIPLPRLWDTSLDKIRRRCHIDATEAIREAFRIIDEVLADLKFVHGPDHGAHLVRLWEQPALGQHLAQDRHMPPMLVQALRSWGGTQESVTSLAGGEVTFQPRVAMRVVALATELVKW 1338
+S P SS +F HI FIP PRLW L + +RCH+DA EA+R A I+DEVL DL HLVR PA+ L R MP L + W Q + G VTF P VA R V A L W
Sbjct: 405 KSCAGPWSSPFPLFRHIERFIPWPRLWGPLLPILHKRCHVDANEALRGALSIMDEVLTDLNVSTDAVQEMHLVRAAAYPAMRACLCAKRGMPSDLAATIVRWNDAQSILARFERG-VTFSPLVADRAVKDAARLYHW 540
BLAST of mRNA_H-canaliculatus_F_contig1522.3891.1 vs. uniprot
Match: A0A7S3HE86_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HE86_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 8.220e-13 Identity = 41/127 (32.28%), Postives = 69/127 (54.33%), Query Frame = 1
Query: 964 VFEHIVSFIPLPRLWDTSLDKIRRRCHIDATEAIREAFRIIDEVLADLKFVHGPDHGAHLVRLWEQPALGQHLAQDRHMPPMLVQALRSWGGTQESVTSLAGGEVTFQPRVAMRVVALATELVKWYR 1344
+FE ++ ++P+PR+W SL ++RRC + +A+ + IIDE+LAD G D LV+L P + L + +MP L+ L + TQ + + EV F+P A ++ + +L +WYR
Sbjct: 189 LFELVMEYMPMPRVWQWSLLHLKRRCKLAPHQAVLDMSIIIDEILADAAIFGGTDQKFLLVKLNRSPQMHSFLLEKLNMPATLLDTLCDFADTQSLLQRVTDQEVAFKPTFARNMLTVVVDLYRWYR 315
BLAST of mRNA_H-canaliculatus_F_contig1522.3891.1 vs. uniprot
Match: A0A4D9CSP7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSP7_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 3.010e-9 Identity = 47/126 (37.30%), Postives = 60/126 (47.62%), Query Frame = 1
Query: 907 PSLSMLIRSLISPVSSNRAVFEHIVSFIPLPRLWDTSLDKIRRRCHIDATEAIREAFRIIDEVLADLKFVHGPDHGAHLVRLWEQPALGQHLAQDRHMPPMLVQALRSWGGTQESVTS---LAGGE 1275
P +L R++ P +F HI FIP PRLW L + +RCH+DA EA+R A I+DEVL DL HLVR PA+ L R MP L + Q T+ L GG+
Sbjct: 398 PMAEVLCRAMELPFP----LFRHIERFIPWPRLWGPLLPILHKRCHVDANEALRGALGIMDEVLTDLNVSTDAVQEMHLVRAAAYPAMRACLCAKRGMPSDLAATITGRSRMQPGSTTGCALGGGD 519
BLAST of mRNA_H-canaliculatus_F_contig1522.3891.1 vs. uniprot
Match: A0A5C5UUB3_9BACT (Ankyrin repeats (3 copies) n=1 Tax=Blastopirellula retiformator TaxID=2527970 RepID=A0A5C5UUB3_9BACT) HSP 1 Score: 55.1 bits (131), Expect = 5.960e-5 Identity = 31/65 (47.69%), Postives = 40/65 (61.54%), Query Frame = 1
Query: 115 GDTALYVAAKAGHDEAVRALLEVPATKVNWQNHKGITSVSVAAHKGREEIVKMLIAADADVNIDS 309
GDT L VAA G D V LL T ++ QN G+T+VS AA KG ++ ++ LIAA A VN +S
Sbjct: 87 GDTLLIVAAYRGSDAVVELLLAAEGTALDAQNSAGLTAVSAAAFKGHDDSLRQLIAAGASVNSNS 151
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 554.3 |
| Seed ortholog evalue | 5.7e-155 |
| Seed eggNOG ortholog | 2880.D8LH68 |
| KEGG ko | ko:K21440 |
| GOs | GO:0000151,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016567,GO:0016740,GO:0019538,GO:0019787,GO:0019899,GO:0031625,GO:0032446,GO:0032991,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044389,GO:0044424,GO:0044464,GO:0070647,GO:0071704,GO:0140096,GO:1901564,GO:1902494,GO:1990234 |
| EggNOG free text desc. | response to abiotic stimulus |
| EggNOG OGs | COG0666@1,KOG0504@2759 |
| COG Functional cat. | G |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko04131 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Ankyrin repeat-containing domain |
| Ec32 ortholog | Ec-24_000760.1 |
| Exons | 12 |
| Model size | 2480 |
| Cds size | 1470 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622929261.3732047-UTR-H-canaliculatus_F_contig1522:10393..10396 | 1622929261.3732047-UTR-H-canaliculatus_F_contig1522:10393..10396 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1522 10394..10396 + |
| 1696845740.7282634-UTR-H-canaliculatus_F_contig1522:10393..10396 | 1696845740.7282634-UTR-H-canaliculatus_F_contig1522:10393..10396 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1522 10394..10396 + |
| 1622929261.6532142-UTR-H-canaliculatus_F_contig1522:17099..17828 | 1622929261.6532142-UTR-H-canaliculatus_F_contig1522:17099..17828 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1522 17100..17828 + |
| 1696845740.8566732-UTR-H-canaliculatus_F_contig1522:17099..17828 | 1696845740.8566732-UTR-H-canaliculatus_F_contig1522:17099..17828 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1522 17100..17828 + |
| 1622929261.667216-UTR-H-canaliculatus_F_contig1522:17844..18122 | 1622929261.667216-UTR-H-canaliculatus_F_contig1522:17844..18122 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1522 17845..18122 + |
| 1696845740.8672013-UTR-H-canaliculatus_F_contig1522:17844..18122 | 1696845740.8672013-UTR-H-canaliculatus_F_contig1522:17844..18122 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1522 17845..18122 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622929261.3883028-CDS-H-canaliculatus_F_contig1522:10396..10501 | 1622929261.3883028-CDS-H-canaliculatus_F_contig1522:10396..10501 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1522 10397..10501 + |
| 1696845740.7435665-CDS-H-canaliculatus_F_contig1522:10396..10501 | 1696845740.7435665-CDS-H-canaliculatus_F_contig1522:10396..10501 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1522 10397..10501 + |
| 1622929261.4069283-CDS-H-canaliculatus_F_contig1522:11879..11988 | 1622929261.4069283-CDS-H-canaliculatus_F_contig1522:11879..11988 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1522 11880..11988 + |
| 1696845740.7535577-CDS-H-canaliculatus_F_contig1522:11879..11988 | 1696845740.7535577-CDS-H-canaliculatus_F_contig1522:11879..11988 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1522 11880..11988 + |
| 1622929261.4243534-CDS-H-canaliculatus_F_contig1522:12509..12641 | 1622929261.4243534-CDS-H-canaliculatus_F_contig1522:12509..12641 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1522 12510..12641 + |
| 1696845740.7632132-CDS-H-canaliculatus_F_contig1522:12509..12641 | 1696845740.7632132-CDS-H-canaliculatus_F_contig1522:12509..12641 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1522 12510..12641 + |
| 1622929261.4370086-CDS-H-canaliculatus_F_contig1522:12811..13005 | 1622929261.4370086-CDS-H-canaliculatus_F_contig1522:12811..13005 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1522 12812..13005 + |
| 1696845740.7726011-CDS-H-canaliculatus_F_contig1522:12811..13005 | 1696845740.7726011-CDS-H-canaliculatus_F_contig1522:12811..13005 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1522 12812..13005 + |
| 1622929261.4542103-CDS-H-canaliculatus_F_contig1522:13465..13525 | 1622929261.4542103-CDS-H-canaliculatus_F_contig1522:13465..13525 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1522 13466..13525 + |
| 1696845740.7844715-CDS-H-canaliculatus_F_contig1522:13465..13525 | 1696845740.7844715-CDS-H-canaliculatus_F_contig1522:13465..13525 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1522 13466..13525 + |
| 1622929261.4699874-CDS-H-canaliculatus_F_contig1522:13732..13930 | 1622929261.4699874-CDS-H-canaliculatus_F_contig1522:13732..13930 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1522 13733..13930 + |
| 1696845740.7944577-CDS-H-canaliculatus_F_contig1522:13732..13930 | 1696845740.7944577-CDS-H-canaliculatus_F_contig1522:13732..13930 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1522 13733..13930 + |
| 1622929261.5256786-CDS-H-canaliculatus_F_contig1522:14262..14439 | 1622929261.5256786-CDS-H-canaliculatus_F_contig1522:14262..14439 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1522 14263..14439 + |
| 1696845740.803707-CDS-H-canaliculatus_F_contig1522:14262..14439 | 1696845740.803707-CDS-H-canaliculatus_F_contig1522:14262..14439 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1522 14263..14439 + |
| 1622929261.567289-CDS-H-canaliculatus_F_contig1522:15499..15580 | 1622929261.567289-CDS-H-canaliculatus_F_contig1522:15499..15580 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1522 15500..15580 + |
| 1696845740.813512-CDS-H-canaliculatus_F_contig1522:15499..15580 | 1696845740.813512-CDS-H-canaliculatus_F_contig1522:15499..15580 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1522 15500..15580 + |
| 1622929261.5947516-CDS-H-canaliculatus_F_contig1522:15951..16023 | 1622929261.5947516-CDS-H-canaliculatus_F_contig1522:15951..16023 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1522 15952..16023 + |
| 1696845740.8236418-CDS-H-canaliculatus_F_contig1522:15951..16023 | 1696845740.8236418-CDS-H-canaliculatus_F_contig1522:15951..16023 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1522 15952..16023 + |
| 1622929261.6283197-CDS-H-canaliculatus_F_contig1522:16187..16361 | 1622929261.6283197-CDS-H-canaliculatus_F_contig1522:16187..16361 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1522 16188..16361 + |
| 1696845740.8332937-CDS-H-canaliculatus_F_contig1522:16187..16361 | 1696845740.8332937-CDS-H-canaliculatus_F_contig1522:16187..16361 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1522 16188..16361 + |
| 1622929261.641874-CDS-H-canaliculatus_F_contig1522:16931..17099 | 1622929261.641874-CDS-H-canaliculatus_F_contig1522:16931..17099 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1522 16932..17099 + |
| 1696845740.8435147-CDS-H-canaliculatus_F_contig1522:16931..17099 | 1696845740.8435147-CDS-H-canaliculatus_F_contig1522:16931..17099 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1522 16932..17099 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1522.3891.1 >prot_H-canaliculatus_F_contig1522.3891.1 ID=prot_H-canaliculatus_F_contig1522.3891.1|Name=mRNA_H-canaliculatus_F_contig1522.3891.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=490bp
METEDPREAPWTVTEFFLDPRRYNPSAPILHKAANADGDTALYVAAKAGH DEAVRALLEVPATKVNWQNHKGITSVSVAAHKGREEIVKMLIAADADVNI DSNNGSTPLIQASHFGHAEVVKLLVKANALVDKANQKGTTALMRATQEGN EEVVGILVSAGADVSKRNNERMNALMLGSQRGHAAIVQALIHHKADIDGQ TAQGSTALMLACKRGHEEVVRVLLTAGAELHQKDSRGRTARDTASKRSHE TILAMLHPSKQMRLMQDAEVAQRTLVLQRIFNRYTAGKLVVTDTQPDVSG SPSLSMLIRSLISPVSSNRAVFEHIVSFIPLPRLWDTSLDKIRRRCHIDA TEAIREAFRIIDEVLADLKFVHGPDHGAHLVRLWEQPALGQHLAQDRHMP PMLVQALRSWGGTQESVTSLAGGEVTFQPRVAMRVVALATELVKWYRAQE NSTWHTVDPDIAATCANGAGSGRVDGEIEGESSDGEMDS* back to topmRNA from alignment at H-canaliculatus_F_contig1522:10394..18122+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig1522.3891.1 ID=mRNA_H-canaliculatus_F_contig1522.3891.1|Name=mRNA_H-canaliculatus_F_contig1522.3891.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=7729bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1522:10394..18122+ (Hapterophycus canaliculatus Oshoro5f female) GCGATGGAGACAGAGGACCCACGCGAAGCTCCTTGGACGGTAACGGAGTT
TTTCCTGGACCCTCGGCGCTATAACCCGTCCGCCCCGATTCTTCACAAAG
CTGCTAACGTGAGGAATAGGGGTCTAGATGACCGAATGGCAACAACAGCA
GTCGACAGACACCAACTGACTGCCGTCCTGCCGCGAGTATGAAGAAGGAA
ACAAGGGATTAATATATAGACAAGGACCTTGTCGGAAGTCCTGTCGGACG
AAGAGGCGCGCGTCGTCACACGATGTAGGGGGAGGCACCACGTGATACAC
TTCGGAGAGCAATGTGTTTTTTATTTCGTGTTGGATGTCTTTCGTCCGAT
GTTTCACGAAACAATGATTTTCAAAATTGTGACGTGTATTTTGAACCTCC
TTCACCCCCTTAGACTGATTTCGGTGGTCATGTTAAGTGTTCCGCCAAGG
AGTGCAAGTTACAGCATTTTCGGACTAGTGTACATGATGGTTGAGAGGAA
ACGCCCATGGAGTAATTTTACGGCAAGGTTGCCCTATCGATACAGCAGTA
CTTGTATTGTAAACTGTAAGGGGGGTATCCGGGCGTCCGTCCTTCCCTTC
CATCTCTTCTGGTGTCTTTCACAACGTAGTACGACGCGCGAGTATTGCTC
AGGGGGTAGGCGCAACAGATTCAAAATCATTGCTTTACGGACCGCCGTTG
GCTTTCCCCTTTACCCCTAAAGTCCAATCCATTCTGGATCCCAGCTTGAA
GGCGAATCGGGTTAAACAGCAGGACTTCGGCGATCGGAGGGCAGGCAGCG
ACATCGGTGTTTGTCCCCGTCCCATTCCTGAGCCCCCTCCGCCGCGCTTT
GCCTCGAGCCGTATTTTTTCACGCGGTTTTTCCCCTCAATAGAAGAGGCG
AGAAAGCCTCCCTGTCCTTACTCAGTCCGCAGCGCTTAAAACGAGAAGAC
CCTCTTTATCTTGAGGGATCTGAACCCCGACCACTTCGATCAGAAGTGTA
CGGGATGACCCGAAACACAACTCAAATGTGTTTGGCAGGGGTCATGAGCT
CATTCACATCGTCACCCTAGCTTTCCTAGACTCTCTTCGACTCGTGATGC
TGATTGACTTCACGGTGGATTCGTGGACACCACCGCTAACCTTACCCTGA
AAAATTCTTACTTAATGTCCAGATTCACGCATCTCCTTATCCTGCTAGAA
AGTAAAACTTAGCTTTTCACAGCAGTCATAAAAGGCCGAGGCCCGCCGTT
CCATGCATTGTGACAAGCTGATGGATTTACACGAGGTGCTAACGCTATCC
CAACTCTTCTAGAAACAAAAGTGAAAAACCACGACTTCTGCGTCTGATCC
AACGGCAATCCTTGCGTGCTTCACGGTATTTGTCCTTCGCGAGCCGATTT
TGCCTTGGCGATGCGATCCGAGCGTACTGGATGTCCTCGCTTAGGTACGT
ATCTTGTTCAACTTGTCATGCTATCTTGCTTCGCAGGCCGACGGGGATAC
CGCGTTGTATGTTGCGGCGAAAGCTGGACACGACGAAGCTGTGCGTGCTC
TTTTGGAAGTGCCGGCCACGAAGGTCAACTGGCAAAATCACAAAGGTATG
CAGCAAGGGACGATTGCGACCATGTGTTTGCCTTTGGGCGTCCCCTTCCT
GGATAATGTACGACGGCTGTGCCGATACGCTTGTGATACATTCCCCGTTG
ATCATCCCCCCTTCAGCTCCCCACCATGTGCTACTCTGTCGATAGCGCTT
GACAAAGCGCAGCAAATGGCCCCTTTCAAGCACTCATCCAATTGTGCTTC
CACCGTATCTGGTTATTATGTACGTGGGGTAAGTCTGTAAGAAAGCCCGA
AGTCGAATTCAAGTGTAAAAAAATAAAACTAGTAGGACCCAACCCCGATA
TCAACAGCGAATAAACGACGCCTTCTGATGTTGCTGAACTCTAGTTGCAC
GTGGATAGCGCACAACTCATCGTGGTGAGTGTGTCGTGACCATCTATTTT
CTCTTGTGTCTTGTATGCCATCTGATGTCATGCCACGCGCACAACTTTCT
CACGAGCAAATTGATTCCCTTATGATGATTTTACAACATGGCGGTCGTGC
ATCGTCGACCTGTAAGGCATTACTTCGGTTTCGGTAGCAGCTCACAAGGG
GCGCGAGGAGATTGTGAAGATGCTCATTGCGGCTGATGCGGACGTCAACA
TCGACAGCAACAACGGCTCAACACCTCTCATCCAGGCATCTCATTTCGGT
AGGTCTGCTGGGCAAAGAGTTGTTGGCGCCGATGTTTCAATTTTTTACCG
CCCAGCATAAAACCTGGTGCCAATAAGATGCTGTCTTCATTCTCCAGCCT
GTGAACAGGTACGTTGTCGCGCTCGATTACCTTTTTACGTCTGAATTGCC
GTCATCACCGCTGCGCAGGGCACGCCGAAGTTGTAAAACTCCTCGTCAAG
GCCAATGCGCTCGTGGACAAGGCGAACCAAAAAGGGACTACAGCACTGAT
GCGCGCGACACAAGAGGGCAACGAAGAGGTGGTTGGCATTCTCGTGTCTG
CTGGAGCGGATGTTAGCAAGCGTAACAACGAGCGGATGAATGCTCTTATG
CTGGGTTCGCAGGTGAAACGCCTGCCGCTTGTGAACGTTGTGAGAACGTT
GTGAGAAAGGGTCCTTGGGTTGGTCTCCGCGGCAAGGTTAAAGCGTGTAC
ACGCTTGTGGCAGTCGACCTGAGCGTGGCTGAGTGGTATCAAGGAGTAGG
ACGGAGGTACCGGACATCGAGAGAGAGCGCCCTGTGCTGTGTGCGGTGTG
CGAAGAGCTGTTTGCGGGCACCAGTGAAGGTGCGTATCAGCTGGATACTA
TTCATCCAGTCTATGTAAGTGATCGTGTACTCGACTTCTGCAACAAAATT
TCTTCACGGCCGTCTTCTTGAATGCGCACCGTCTGAAGCAGGCCTTTTTG
GTAGTTGTGAGTCCCTTCCCTCCCCCCCCCCCGCCGAAAAGCGCACGTGT
GATTTGTGGTTCCTTCGCAGCAGTGCCTGACGCAACCCTTGATCTGTTGT
TCTCGTCGCCCTTTCTTGCCAGAGAGGGCATGCGGCAATTGTCCAAGCCC
TCATCCATCATAAGGCGGACATCGACGGACAGGTGAGAGAAGCCGTCGTT
TTCCATCGCAGGTGGTTTACCACGAAACGCCGTGCCCATGTTAACTGTAT
CACATTCGGCAAAAATCCTGCAGCTGTGCTATATAGGCACTCGTGTGATG
TGCGAGAATTAGGCGCAGTCACGCTTGAGTAACGTCATCCTCAAATCCTT
CCGATTGCATCTTTATCACTTCGTCGTTCGTGACCGCAGACCGCACAAGG
TAGCACGGCTCTCATGCTCGCATGTAAACGTGGCCACGAGGAAGTGGTTC
GGGTTCTTCTCACGGCTGGAGCAGAGCTACACCAGAAAGACAGTCGGGGG
AGAACAGCGCGAGACACGGCGTCGAAGCGGAGTCACGAAACAATCCTTGC
CATGCTACACCCTTCGAAGCAGATGAGGCTCATGCAGGTAGGGACTGGAA
GGAATCCAAAGCTAAAGGCCTATCTCGTCAAACCTTCCTTCCTTGGGACA
GCGCGCTCGTCTACTTGTCGGCGGCCAAGTCGTCTATGGATTCGTGTTCT
TGAATGACGAGTCGTCCACTTTACAACCGAGAGTATGTGAGCGGGGGATA
CCTGCAGTTTTTCAAATCTACGTGAAAACAGCCCGCCCAACTAACCTCAA
GATCGGCGATCGGTAGCTCAATGCCCACTTGATGTTCGAACGCTGCGAAA
TGTTGGGTAACGGCTCGTTCATGCAGGCGACAACGATATGATTCACCAAC
TCTGACTTTTGGCGCACAGGACGCGGAGGTCGCACAAAGGACGCTCGTGC
TGCAGAGGATCTTCAACCGGTATACGGCAGGGAAACTGGTTGTCACCGAC
ACGCAGCCAGATGTTTCGGGCTCGCCTTCTCTTTCCATGCTCATCCGGAG
CCTAATCTCGCCGGTGTCTTCAAATCGAGCAGTCTTTGAGCACATCGTAA
GTAAATCCTTTTTTTTTACTTCTCCGGGAGTAAATTCGTAAATTCAGAGT
CCTTTTTGTCCGGTCCTTTACTCTCATTACGACTTAAGGTTGTATTCGAC
CACCGATCGAATCACTGGACACGCGGCGCAATCAATAACCATGTTTCCTT
GTGAAAAAGACAGCGGTGCCGTGCAGAAGAACGTACGCATAGACAACGTA
CGTCTATAAAGCAACACGAGCTTTCCAGGGTTGAGAGCCACCACAACTGC
CGTCGAACGGCTGGTGCTGTCAACTAGGGCCCTCTCAAGGCTGCCGAGTC
TTCATGCTTTCGCCCCCCGAGTAATGTAGTTCAGTTATTACCTATCATGT
TTGCTCGGTCCTCTGTATCCAGTTTATTCCACAAAATGACAACTTAACAG
GATTACGAAGGCTTAGACTGGGGTATGCGTATTTATGTGCTTGTCTCGTC
CCCTATCCCCTGGTCCTCGCTGAAGTAGGTTCCTTAGCGCTCTGCGTCGG
GTATGTGGTGTAGCTCACAGCCGCTTTGGTCGATAGGTGCTGTTCTCATG
CGGGGTCTGTAGTAGCAATGTGTGTCGCTGGTGTGAAGAACTGGAGGGCT
ACAGGGACAGCAGTCGGATATGTGTCCAACACAGATAAAGCTGTGAAAAG
TTATTAAATGGTGCTGAATATTCAGACGTAAGAGCAAAAGGCTTGTTTGA
AGTATAACGGAACTCGAGAGCACCAATTTTGATATGGTGCTGCTTCTTGC
TGCTACTCTATGAAAGCCCTCAGCCTAGTCGGCATGTATCCTTGCTGTAA
ACCGTCTGGTTCGTCTGTTCGCAGTAGCTGATCAAGTACCTGTGAAGCTT
CGTGCATTTTTTTTCCGGGATGAATCCTGCAATCTCCGTCTTTCATGAAG
AGTCATACCCCAAAATATTGACTTAAAAAAGTCGCCCAAGGATTATAGGA
GCAACGTTTCTTTTACCTTGTACGGCTGCAGTCGACGGTAATAGATCTTT
CATTCGCCAACAAGACCCTGCGTGTGTTGTTCTACTTCGGTTGGCTGATC
GTACAGGTGAGCTTCATTCCGCTTCCGCGGTTATGGGATACGTCACTAGA
CAAGATTCGGCGTCGTTGCCACATCGACGCGACTGAAGTGAGTTGACATG
TGCACTTGTCCTTTCGACAACCAGGTAGCTTGCGATGCAAATGTAGGCGC
GCGAGCGGTGCTAGTGATTTAATGCGAGCAATCTACAGAGTAGGGTGATG
TAGACGTCGTAAATTATCCACAATGGCGCGCGTGATACGCTCACTAGTGG
TGCACACTCCGTGACAGCGTCGACTACCTTTAGTTGTATAGATATCCAAG
AAATGTCGAGGAAACGCTTAACAGGAGACGCTTTGTTTAGGGGCCTAGTG
AAGGTGATGTTTGATCGCCGGGCATGACCTACCATCTCGAAACCGACCTC
CTTCCAATTCTGTGCTTTATTTCCACCGTGTAATTGGTTCAATTTGCATG
GTCACCAGGCTATCCGCGAAGCGTTCCGGATAATCGATGAGGTGCTGGCA
GACCTCAAGTTTGTGCACGGCCCAGACCATGTAAGCGCTAGGTTTGAACA
CGGTTTTGTTGTAGCGTCATTGGCCTGTGGAAGTGTGTAGACGCGATAGA
CAAGCGGAACAGTTGCGGCTCTGGTGATCGATCCTGGCCCCAATGACTGG
TTGAAAACTGAGATTCAAGTTGTCGACGGTCGTGACGCCTGCAGGGGGCA
CATCTTGTTCGATTATGGGAACAACCTGCTCTTGGCCAACATCTCGCTCA
AGATCGACACATGCCGCCTATGCTGGTGCAAGCTTTGAGATCTTGGGGGG
GTACCCAAGAAAGTGTGACCAGCTTAGCTGGTGGAGAAGTTACCTTCCAG
CCACGGGTGGCTATGCGGGTGAGCGCATTGGTTTTTACACATCCCTCGTA
CACTTTCCACAGAGGCGGGTGACTTCAACGTGGAGGAACTAAAGTTATTG
AATCTGCTCCACCGTAGAATGGATGAGGGACTTCTTCGAGACCTTTTCCA
TCAGCGCGGATACATCGCGCACTTAAACGCAACAGGAGCCATCTCGCACT
AAAAGAGTCCAGGCGCCAGCAGCAAAAGAAGGCGAAGGCAGGTCGCCTCG
CGTTCAAGCTCATATCGTACCTGCCCGACCAGGATACTTTCACATATTGC
TAATCGTGTGTTAAAATGCGGTTCGGATGATTTCGATCCAGAGCCCAACG
GTTCACATACTTCATTTTTGGAAGCCTTGTTTCGAATTCGTCAATAGCGC
AGCTGCACTCAGTTTTGGTACCGCCTTTTGCATGGCAAACTTCGCATTAT
TTTCCGACATTGCATGATTGACCTTTTGCGTCGTCTCGGGGATTGCTACG
TGAAAACGCCGAGGGAGAGTGGCCGGCGATTCCCTGAGAAAATACTGGGC
TATATGTCTTCACTGGTGTTTCTTTCGCGCGCTAATAGGTGGTTGCTCTT
GCAACAGAGCTGGTGAAGTGGTACAGAGCTCAAGAAAACTCTACATGGCA
CACCGTCGACCCAGATATTGCAGCAACCTGCGCCAATGGCGCTGGATCCG
GACGAGTCGACGGCGAAATAGAGGGCGAGAGCTCAGACGGGGAAATGGAT
AGCTAAACATTTTTGTAGATATCAGCAGGTCCGTTGCTAAAATGCTTCAT
GTCTCGCGTTGTGTGTGTATCGTGTCGCGGTTTGGTATGGATAATGTTTT
GGAGTGCGAGATACAGTGTTTCATAGTTTTGGGACGTTTCCTCCCAGGAT
ATTCATTCAACGAGGGGTAAGATTCGAGGGCGTGGGAAATAACAGGCATG
TGATCGGTAATTGTTTGTTAAACTGCTCTCACGATGTTCACGTGACAGTT
GGGATTTCTCACCTACTCTCACGAGGGCATTGGCGAATGAAATTGTTTGA
GGTACGGTGTGGCTGTGTGGGTAAATGTAAATGTTTAATATGCACTTGCA
TCTCCGCGCGACAAGTGTGAGGTTTGAGCCAGCGCTCGTTTCCCCCCATG
GCCATCAGGGTCTTCTCAGACCACCCAATTCAGGCGTTCTTACAAACACG
ATTTTTTCCTGAGCGATGTGTGGCCTGTCAAACTCAATTTACTTCCGTTT
AGATATCTCCTCGTTGAGGTTTAACTCAATCTTCGATGGGGATTGATCCT
CCGGCCTTGTTCGTTCTTCTGTTCGTGGCCCCTGACGGCGCTCTTACTTT
TACGTTTTCTTTGTTTGGCACTTCATCTCAAACTCAACGGTGTCACCAAG
TCTCAGCTCTCACCTCTTCTGTGCTCTTGCGCTTTGGTTACTTCGGTTAC
TTCGGTGTTTCAATTATTGGCTTCCCACTTCCTTCAGGGGGAACATGACC
GTGATTCCCCGGGAGCACATTTATCTTTCCTCCCCAATTTACATCCCACG
GACGAGAGGAATGCGTTGTGCCGATTAAGTAAAGTTCGCTTTTGTGGCTG
GCGAGAAAAAGGAATTGCCCCTCCAGCGAGGACTACGGCAAGCAGATGAA
CATGAAGGGGAAGAACTCCTGGTAGACTTCATCACTTGTGACCCCAGCTG
AGCCCGACATACACCGGGAGCTTCAGACCGCGATTTCGGACAGGAGAAAG
ATGACCCTGACGTTGAAAATGAAAAGCAC back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig1522:10394..18122+ >mRNA_H-canaliculatus_F_contig1522.3891.1 ID=mRNA_H-canaliculatus_F_contig1522.3891.1|Name=mRNA_H-canaliculatus_F_contig1522.3891.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2940bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1522:10394..18122+ (Hapterophycus canaliculatus Oshoro5f female) ATGGAGACAGAGGACCCACGCGAAGCTCCTTGGACGGTAACGGAGTTTTT CCTGGACCCTCGGCGCTATAACCCGTCCGCCCCGATTCTTCACAAAGCTG CTAACATGGAGACAGAGGACCCACGCGAAGCTCCTTGGACGGTAACGGAG TTTTTCCTGGACCCTCGGCGCTATAACCCGTCCGCCCCGATTCTTCACAA AGCTGCTAACGCCGACGGGGATACCGCGTTGTATGTTGCGGCGAAAGCTG GACACGACGAAGCTGTGCGTGCTCTTTTGGAAGTGCCGGCCACGAAGGTC AACTGGCAAAATCACAAAGGCCGACGGGGATACCGCGTTGTATGTTGCGG CGAAAGCTGGACACGACGAAGCTGTGCGTGCTCTTTTGGAAGTGCCGGCC ACGAAGGTCAACTGGCAAAATCACAAAGGCATTACTTCGGTTTCGGTAGC AGCTCACAAGGGGCGCGAGGAGATTGTGAAGATGCTCATTGCGGCTGATG CGGACGTCAACATCGACAGCAACAACGGCTCAACACCTCTCATCCAGGCA TCTCATTTCGGCATTACTTCGGTTTCGGTAGCAGCTCACAAGGGGCGCGA GGAGATTGTGAAGATGCTCATTGCGGCTGATGCGGACGTCAACATCGACA GCAACAACGGCTCAACACCTCTCATCCAGGCATCTCATTTCGGGCACGCC GAAGTTGTAAAACTCCTCGTCAAGGCCAATGCGCTCGTGGACAAGGCGAA CCAAAAAGGGACTACAGCACTGATGCGCGCGACACAAGAGGGCAACGAAG AGGTGGTTGGCATTCTCGTGTCTGCTGGAGCGGATGTTAGCAAGCGTAAC AACGAGCGGATGAATGCTCTTATGCTGGGTTCGCAGGGCACGCCGAAGTT GTAAAACTCCTCGTCAAGGCCAATGCGCTCGTGGACAAGGCGAACCAAAA AGGGACTACAGCACTGATGCGCGCGACACAAGAGGGCAACGAAGAGGTGG TTGGCATTCTCGTGTCTGCTGGAGCGGATGTTAGCAAGCGTAACAACGAG CGGATGAATGCTCTTATGCTGGGTTCGCAGAGAGGGCATGCGGCAATTGT CCAAGCCCTCATCCATCATAAGGCGGACATCGACGGACAGAGAGGGCATG CGGCAATTGTCCAAGCCCTCATCCATCATAAGGCGGACATCGACGGACAG ACCGCACAAGGTAGCACGGCTCTCATGCTCGCATGTAAACGTGGCCACGA GGAAGTGGTTCGGGTTCTTCTCACGGCTGGAGCAGAGCTACACCAGAAAG ACAGTCGGGGGAGAACAGCGCGAGACACGGCGTCGAAGCGGAGTCACGAA ACAATCCTTGCCATGCTACACCCTTCGAAGCAGATGAGGCTCATGCAGAC CGCACAAGGTAGCACGGCTCTCATGCTCGCATGTAAACGTGGCCACGAGG AAGTGGTTCGGGTTCTTCTCACGGCTGGAGCAGAGCTACACCAGAAAGAC AGTCGGGGGAGAACAGCGCGAGACACGGCGTCGAAGCGGAGTCACGAAAC AATCCTTGCCATGCTACACCCTTCGAAGCAGATGAGGCTCATGCAGGACG CGGAGGTCGCACAAAGGACGCTCGTGCTGCAGAGGATCTTCAACCGGTAT ACGGCAGGGAAACTGGTTGTCACCGACACGCAGCCAGATGTTTCGGGCTC GCCTTCTCTTTCCATGCTCATCCGGAGCCTAATCTCGCCGGTGTCTTCAA ATCGAGCAGTCTTTGAGCACATCGACGCGGAGGTCGCACAAAGGACGCTC GTGCTGCAGAGGATCTTCAACCGGTATACGGCAGGGAAACTGGTTGTCAC CGACACGCAGCCAGATGTTTCGGGCTCGCCTTCTCTTTCCATGCTCATCC GGAGCCTAATCTCGCCGGTGTCTTCAAATCGAGCAGTCTTTGAGCACATC GTGAGCTTCATTCCGCTTCCGCGGTTATGGGATACGTCACTAGACAAGAT TCGGCGTCGTTGCCACATCGACGCGACTGAAGTGAGCTTCATTCCGCTTC CGCGGTTATGGGATACGTCACTAGACAAGATTCGGCGTCGTTGCCACATC GACGCGACTGAAGCTATCCGCGAAGCGTTCCGGATAATCGATGAGGTGCT GGCAGACCTCAAGTTTGTGCACGGCCCAGACCATGCTATCCGCGAAGCGT TCCGGATAATCGATGAGGTGCTGGCAGACCTCAAGTTTGTGCACGGCCCA GACCATGGGGCACATCTTGTTCGATTATGGGAACAACCTGCTCTTGGCCA ACATCTCGCTCAAGATCGACACATGCCGCCTATGCTGGTGCAAGCTTTGA GATCTTGGGGGGGTACCCAAGAAAGTGTGACCAGCTTAGCTGGTGGAGAA GTTACCTTCCAGCCACGGGTGGCTATGCGGGGGGCACATCTTGTTCGATT ATGGGAACAACCTGCTCTTGGCCAACATCTCGCTCAAGATCGACACATGC CGCCTATGCTGGTGCAAGCTTTGAGATCTTGGGGGGGTACCCAAGAAAGT GTGACCAGCTTAGCTGGTGGAGAAGTTACCTTCCAGCCACGGGTGGCTAT GCGGGTGGTTGCTCTTGCAACAGAGCTGGTGAAGTGGTACAGAGCTCAAG AAAACTCTACATGGCACACCGTCGACCCAGATATTGCAGCAACCTGCGCC AATGGCGCTGGATCCGGACGAGTCGACGGCGAAATAGAGGGCGAGAGCTC AGACGGGGAAATGGATAGCTAAGTGGTTGCTCTTGCAACAGAGCTGGTGA AGTGGTACAGAGCTCAAGAAAACTCTACATGGCACACCGTCGACCCAGAT ATTGCAGCAACCTGCGCCAATGGCGCTGGATCCGGACGAGTCGACGGCGA AATAGAGGGCGAGAGCTCAGACGGGGAAATGGATAGCTAA back to top
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