mRNA_H-canaliculatus_F_contig1521.3886.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1521.3886.1
Unique NamemRNA_H-canaliculatus_F_contig1521.3886.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1521.3886.1 vs. uniprot
Match: D8LQ30_ECTSI (Lactamase_B domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ30_ECTSI)

HSP 1 Score: 655 bits (1690), Expect = 8.550e-225
Identity = 313/364 (85.99%), Postives = 340/364 (93.41%), Query Frame = 2
Query: 1223 QVGPDGDFAGATKDVASLVYLCKPEEGCLTAEDWESSSHKQRLDLPLGPGLFEVRSALKAVDEMSKMAKPMLFMCKSANRAGAMASVFQGCRSGWSAEQTLDWAKPLGLKFLTTPAMVEWVSACVDSRFPKGGLIFRQLFEKESSTFTYVLGDAETKEAIIIDPVDTMAERDAEMVLQMGLKPTLLLNTHVHADHITGTGKLKAALPS-TKSVLSEASGGQADVKVNDGDKIRFGTRHVEARATPGHTAGCMTFVLDDKSACFTGDALLIRGCGRTDFQGGSSETLYASVKTKIFTLPNDCLIYPAHDYKGRHNSTVGEEKKYNPRLTKPVEEFVSIMSNLNLSYPKKIDKAVPANMVCGFCDE 2311
            QVGPDGDFA ATKDVASLVYLCKP+EGCL  + WESSSHK+R+DLPLGPGLFEVRSAL AVD ++KMAKP+LFMCKSANRAGAMASVFQGCR+GWS+EQTL+WAKPLGLKFLT P MVEWVSACVDSRFPKGGLIFRQLFEKESSTFTY+LGDAETK+A+IIDPVD  AERD++MV +MGLKPTLLLNTHVHADHITGTGKLK  LP   KS +SEASGGQADVK++DGDKIRFG+R++EARATPGHTAGCMTFVLDDKSACFTGD LL+RGCGRTDFQGGSSETLYASVK KIFTLPNDC +YP HDY+GRH+STVGEEK YNPRLTKPVEEFVSIMSNLNL YPK+IDKAVPANMVCG CDE
Sbjct:   16 QVGPDGDFAAATKDVASLVYLCKPQEGCLPDQAWESSSHKERVDLPLGPGLFEVRSALSAVDRINKMAKPILFMCKSANRAGAMASVFQGCRNGWSSEQTLEWAKPLGLKFLTMPPMVEWVSACVDSRFPKGGLIFRQLFEKESSTFTYILGDAETKQAVIIDPVDKTAERDSQMVTEMGLKPTLLLNTHVHADHITGTGKLKGLLPGGAKSGVSEASGGQADVKIHDGDKIRFGSRYLEARATPGHTAGCMTFVLDDKSACFTGDTLLVRGCGRTDFQGGSSETLYASVKGKIFTLPNDCTVYPGHDYQGRHSSTVGEEKAYNPRLTKPVEEFVSIMSNLNLPYPKQIDKAVPANMVCGICDE 379          
BLAST of mRNA_H-canaliculatus_F_contig1521.3886.1 vs. uniprot
Match: A0A835YKA0_9STRA (Beta-lactamase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKA0_9STRA)

HSP 1 Score: 332 bits (851), Expect = 3.180e-101
Identity = 175/347 (50.43%), Postives = 216/347 (62.25%), Query Frame = 2
Query: 1271 SLVYLCKPEEGCLTAEDWESSSHKQRLDLPLGPGLFEVRSALKAVDEMSKMAKPMLFMCKSANRAGAMASVFQGCRSGWSAEQTLDWAKPLGLKFLTTPAMVEWVSACVDSRFP-KGGLIFRQLFEKESSTFTYVLGDAETKEAIIIDPVDTMAERDAEMVLQMGLKPTLLLNTHVHADHITGTGKLKAALPSTKSVLSEASGGQADVKVNDGDKIRFGTRHVEARATPGHTAGCMTFVLDDKSACFTGDALLIRGCGRTDFQGGSSETLYASVKTKIFTLPNDCLIYPAHDYKGRHNSTVGEEKKYNPRLTKPVEEFVSIMSNLNLSYPKKIDKAVPANMVCGFCD 2308
            S V++  P E  L     +    K RLDLPLG G F++   +K    M  + K                                                 +WV+ C ++  P K  LIFRQL + ESST+TY+L DA T++AI+IDPVDTMAERDAE++ +MGL     LNTHVHADH+ G  KL+A  P  +SV+S ASG QADV V  GD + F  R V  RATPGHT GC +FVLDD+S  FTGDALLIRGCGRTDFQ G+S++LY SV T++FTLPND ++YPAHDYKGR NST+GEE+ +NPRLTK +EEF  IM+ LNL+YPK+ID AVPANM CG  D
Sbjct:   39 SFVFVGLPTENILPDGVLDG---KPRLDLPLGEGKFDMTMGVKTARAMKDLPK------------------------------------------------ADWVAGCTEAAAPGKPPLIFRQLLDLESSTYTYILADAYTRDAIVIDPVDTMAERDAEIITEMGLNLLFALNTHVHADHVNGASKLRALFPQMRSVISRASGAQADVAVAPGDSVEFAGRSVVVRATPGHTDGCCSFVLDDRSMVFTGDALLIRGCGRTDFQQGNSKSLYESVHTQLFTLPNDTIVYPAHDYKGRGNSTIGEERMFNPRLTKDIEEFQRIMAGLNLAYPKRIDAAVPANMKCGLYD 334          
BLAST of mRNA_H-canaliculatus_F_contig1521.3886.1 vs. uniprot
Match: A0A7S0SPR9_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SPR9_9STRA)

HSP 1 Score: 331 bits (849), Expect = 1.180e-99
Identity = 168/318 (52.83%), Postives = 217/318 (68.24%), Query Frame = 2
Query: 1373 LFEVRSALKAVD-EMSKMAKPMLFMCKSANRAGAMASVFQGCRSGWSAEQTLDWAKPLGLKFLTTPAMVEWVSACVDSRFPKGG--------LIFRQLFEKESSTFTYVLGDAETKEAIIIDPVDTMAERDAEMVLQMGLKPTLLLNTHVHADHITGTGKLKAALPSTKSVLSEASGGQADVKVNDGDKIRFGTRHVEARATPGHTAGCMTFVLDDKSACFTGDALLIRGCGRTDFQGGSSETLYASVKTKIFTLPNDCLIYPAHDYKGRHNSTVGEEKKYNPRLTKPVEEFVSIMSNLNLSYPKKIDKAVPANMVCG 2299
            L  + S+ +A +  + ++ KP+L  CKS  RAGA+ + + G  SG  AE     AK  G  +L +  +  WV+  VD+    G         L  RQLFEKESST+TY+L D  +KEA++IDPV   AERDA +V ++GL     +NTH HADHITGTGKLK  LP + S +S  SG  AD+K+++ D +  G RH+ A  TPGHTAGC+++V+DD SA FTGDALLIRGCGRTDFQGGS++TLY S+  K+F LP+  ++YPAHDYKG   ST+ EEK +NPRLTK  E F+ IM+NLNL YPKKID+AVPANM CG
Sbjct:  107 LINILSSYRAYELAIKQLPKPLLISCKSNRRAGAVYAAYDGVTSGVDAETVHKQAKEKGFTYLLSEGLTNWVTTVVDTLSVNGAKSIYQSPSLTIRQLFEKESSTYTYLLYDKASKEALLIDPVLETAERDAALVRELGLTLKYAINTHAHADHITGTGKLKQLLPGSLSAISALSGASADIKLSEFDLLTLGNRHIYALHTPGHTAGCLSYVIDDLSAVFTGDALLIRGCGRTDFQGGSADTLYQSIHKKVFLLPDTAIVYPAHDYKGFSLSTIIEEKTFNPRLTKSKEAFIDIMNNLNLPYPKKIDEAVPANMRCG 424          
BLAST of mRNA_H-canaliculatus_F_contig1521.3886.1 vs. uniprot
Match: A0A1S3I4I9_LINUN (persulfide dioxygenase ETHE1, mitochondrial n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3I4I9_LINUN)

HSP 1 Score: 321 bits (823), Expect = 1.270e-98
Identity = 154/234 (65.81%), Postives = 190/234 (81.20%), Query Frame = 2
Query: 1619 GLIFRQLFEKESSTFTYVLGDAETKEAIIIDPVDTMAERDAEMVLQMGLKPTLLLNTHVHADHITGTGKLKAALPSTKSVLSEASGGQADVKVNDGDKIRFGTRHVEARATPGHTAGCMTFVLDDKSACFTGDALLIRGCGRTDFQGGSSETLYASVKTKIFTLPNDCLIYPAHDYKGRHNSTVGEEKKYNPRLTKPVEEFVSIMSNLNLSYPKKIDKAVPANMVCGFCDEDGV 2320
            GLIFRQLFE  SST+TY+L D ETKEA+IIDPV   AERDA++V ++GL     +NTHVHADH+TGTG+LK  +   KSV+S+A+G +AD+ +N+GDK+ FG  H+EAR+TPGHT GCMT+VL+DKS  FTGDALLIRGCGRTDFQ GS  TLY SV T+I +LP DCL+YPAHDYKGR  ++VGEE K+NPRLTK  EEF +IM+NLNL+YPK+ID+AVPANM+CG  +   V
Sbjct:    2 GLIFRQLFESVSSTYTYILADEETKEAVIIDPVMETAERDAQLVEELGLTLKYAVNTHVHADHVTGTGELKKRIGGCKSVISKAAGAKADMFLNNGDKVEFGKYHLEARSTPGHTNGCMTYVLNDKSRAFTGDALLIRGCGRTDFQQGSPLTLYESVHTQILSLPQDCLLYPAHDYKGRTVTSVGEELKFNPRLTKSKEEFANIMNNLNLNYPKQIDRAVPANMMCGVFETPSV 235          
BLAST of mRNA_H-canaliculatus_F_contig1521.3886.1 vs. uniprot
Match: A0A812WIA5_9DINO (GLY3 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812WIA5_9DINO)

HSP 1 Score: 322 bits (826), Expect = 1.300e-97
Identity = 159/302 (52.65%), Postives = 212/302 (70.20%), Query Frame = 2
Query: 1430 PMLFMCKSANRAGAMASVFQGCRSGWSAEQTLDWAKPLGLKFLTTPAMVEWVSACVDSRFPKGGL---------IFRQLFEKESSTFTYVLGDAETKEAIIIDPVDTMAERDAEMVLQMGLKPTLLLNTHVHADHITGTGKLKAALPSTKSVLSEASGGQADVKVNDGDKIRFGTRHVEARATPGHTAGCMTFVLDDKSACFTGDALLIRGCGRTDFQGGSSETLYASVKTKIFTLPNDCLIYPAHDYKGRHNSTVGEEKKYNPRL--TKPVEEFVSIMSNLNLSYPKKIDKAVPANMVCGF 2302
            P+L  C+S+ RA A  ++    ++ W +E+ L WA+ LGL F +  A+ +WV+   D+R               IFRQLF++ES T+TY++    TKE ++IDPVD + +RD + V ++G+K    +NTH HADHITGTG LKA LP  +SVLS A+GG ADV V+ GD + FG+  V  RATPGHTAGC++FVL    A FTGDA+L+RGCGRTDFQGGSSETLY S+ ++I+TLP++C++YPAHDY GR +STVGEEK +NPRL      E+FV+IMS+L L+ PK ID AVPAN+ CG 
Sbjct:   23 PLLVQCRSSTRASAALALHVADKNAWGSEEVLAWAESLGLNFASQEALRKWVAERADTRKAHVAAMEAVHGESPIFRQLFDRESCTYTYLVACPSTKEGVLIDPVDKLVDRDIQFVQELGIKLKYAMNTHAHADHITGTGILKAKLPGVQSVLSRAAGGVADVLVDHGDTLSFGSLSVTVRATPGHTAGCVSFVLGGGKAVFTGDAMLVRGCGRTDFQGGSSETLYDSIHSQIYTLPDECVVYPAHDYNGRTSSTVGEEKAHNPRLKLANTKEQFVTIMSDLKLARPKLIDVAVPANLQCGL 324          
BLAST of mRNA_H-canaliculatus_F_contig1521.3886.1 vs. uniprot
Match: I2CRD5_NANGC (Ethylmalonic encephalopathy 1 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRD5_NANGC)

HSP 1 Score: 324 bits (831), Expect = 2.260e-97
Identity = 161/307 (52.44%), Postives = 214/307 (69.71%), Query Frame = 2
Query: 1430 PMLFMCKSANRAGAMASVFQGCRSGWSA-----------EQTLDWAKPLGLKFLTTPAMVEWVSACV------DSRFPKGGLIFRQLFEKESSTFTYVLGDAETKEAIIIDPVDTMAERDAEMVLQMGLKPTLLLNTHVHADHITGTGKLKAALPSTKSVLSEASGGQADVKVNDGDKIRFGTRHVEARATPGHTAGCMTFVLDDKSACFTGDALLIRGCGRTDFQGGSSETLYASVKTKIFTLPNDCLIYPAHDYKGRHNSTVGEEKKYNPRLTKPVEEFVSIMSNLNLSYPKKIDKAVPANMVCG 2299
            P+L  C+S+ RAGA+A +F    +   A           E+ L+  +  GL     PA+ +WV A +          P+   IFRQLFE ES T+TY+LGD ETKEA++IDPVD   ERD  ++ ++GL   + +NTH HADH+TGTG L+  +   KSV++ A+G +ADV + +G KI FG  H+E RATPGHT GC+++V+DD+S  FTGDALL+RGCGRTDFQ GS+ +L+ SV +++FTLP DCL+YPAHDYKGR +S++ EEK++NPRLTK  EEFVSIM NLNL YPKKID A+P N+VCG
Sbjct:   98 PLLISCRSSARAGAVALLFHAYDAKLQAMVSASPLVLAPEEVLEIGRSAGLSCFNNPALTDWVVASLYFILMGPEHRPRP--IFRQLFEAESCTYTYLLGDPETKEALLIDPVDLTVERDVSLIEELGLTCVMGVNTHCHADHVTGTGLLRQRVQGLKSVIARAAGAKADVLLEEGQKISFGRYHLEVRATPGHTDGCVSYVMDDRSMVFTGDALLVRGCGRTDFQQGSAHSLFKSVHSRLFTLPGDCLVYPAHDYKGRMSSSIREEKQHNPRLTKSEEEFVSIMKNLNLPYPKKIDDALPKNLVCG 402          
BLAST of mRNA_H-canaliculatus_F_contig1521.3886.1 vs. uniprot
Match: A0A7S4D913_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D913_HETAK)

HSP 1 Score: 318 bits (815), Expect = 2.370e-97
Identity = 160/237 (67.51%), Postives = 185/237 (78.06%), Query Frame = 2
Query: 1622 LIFRQLFEKESSTFTYVLGDAETKEAIIIDPVDTMAERDAEMVLQMGLKPTLLLNTHVHADHITGTGKLK-------AALPSTKSVLSEASGGQADVKVNDGDKIRFGTRHVEARATPGHTAGCMTFVLDDKSACFTGDALLIRGCGRTDFQGGSSETLYASVKTKIFTLPNDCLIYPAHDYKGRHNSTVGEEKKYNPRLTKPVEEFVSIMSNLNLSYPKKIDKAVPANMVCGFCDE 2311
            LIFRQLFE ESST+TY+LG   TKEAIIIDPVD  AERDA+ + +MGL      NTHVHADH+TG+GKLK       + LP  +SV++E SG QADVKVNDGD I FGTR V   +TPGHT GC+++VLDD S  FTGDALLIRGCGRTDFQ GS+ETLY SV +KIFTLP+ CL+YPAHDYKGR  S+VGEEK +N RLTKP+EEF  IM NL L YPKKID ++PANMVCG  +E
Sbjct:    7 LIFRQLFEAESSTYTYILGCPSTKEAIIIDPVDLTAERDAQFIREMGLTLVYAANTHVHADHVTGSGKLKQIFNVAESELP-VRSVIAEVSGAQADVKVNDGDVISFGTRSVRVLSTPGHTDGCLSYVLDDNSMVFTGDALLIRGCGRTDFQQGSAETLYNSVHSKIFTLPDSCLVYPAHDYKGRTCSSVGEEKTHNLRLTKPLEEFKEIMDNLGLPYPKKIDASLPANMVCGLYEE 242          
BLAST of mRNA_H-canaliculatus_F_contig1521.3886.1 vs. uniprot
Match: A0A4D9CWP5_9STRA (Lactamase_B domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWP5_9STRA)

HSP 1 Score: 318 bits (816), Expect = 8.640e-95
Identity = 162/321 (50.47%), Postives = 222/321 (69.16%), Query Frame = 2
Query: 1349 LDLPLGPGLFEVRSALKAVDEMSKMAKPMLFMCKSANRAGAMASVFQGCRSGWSAEQTLDWAKPLGLKFLTTPAMVEWVSACVDSRFPKGGL--IFRQLFEKESSTFTYVLGDAETKEAIIIDPVDTMAERDAEMVLQMGLKPTLLLNTHVHADHITGTGKLKAALPSTKSVLSEASGGQADVKVNDGDKIRFGTRHVEARATPGHTAGCMTFVLDDKSACFTGDALLIRGCGRTDFQGGSSETLYASVKTKIFTLPNDCLIYPAHDYKGRHNSTVGEEKKYNPRLT-KPVEEFVSIMSNLNLSYPKKIDKAVPANMVCGF 2302
            +D+  G  L     AL+A+DE+     P L +C S  RA A+  + +    GW+ +QTL +A  + L F+  P++ +WV A V +R  +  L  +FR L+E+ S T+T++LG   TKEAI+IDPVD   ERD +++ +MGL     LNTH HADH+TG+G L   +P  KS++++ SG +A V +  GD++RFG R+VEARATPGHT GCMTFV DD    FTGDALLIRGCGRTDFQ GS ET++ S+ T+IF+LP++  +YP HDY+GR  ST+GEEK++N RL+ K  EEF+ IM+NL L+YPKKID A+PAN+V G 
Sbjct:  115 VDVKDGLSLQLATDALQALDELPA---PALVVCSSGGRASAVQCLRKATEEGWTKDQTLAYALEMKLPFVKNPSLKDWVLATVAAREYRDELPLLFRPLYEETSWTYTFLLGCPVTKEAILIDPVDLTVERDLQVIKEMGLTLVAALNTHCHADHVTGSGLLAQKVPGCKSMIAKISGAKASVHLESGDRVRFGRRYVEARATPGHTNGCMTFVTDDMKMAFTGDALLIRGCGRTDFQQGSPETMFESIWTQIFSLPHETSVYPGHDYRGRLMSTIGEEKRFNSRLSGKSREEFIEIMNNLKLAYPKKIDVALPANLVDGL 432          
BLAST of mRNA_H-canaliculatus_F_contig1521.3886.1 vs. uniprot
Match: UPI001E27C416 (persulfide dioxygenase ETHE1, mitochondrial isoform X1 n=2 Tax=Colias crocea TaxID=72248 RepID=UPI001E27C416)

HSP 1 Score: 309 bits (791), Expect = 1.660e-93
Identity = 147/238 (61.76%), Postives = 184/238 (77.31%), Query Frame = 2
Query: 1592 CVDSRFPKGG-LIFRQLFEKESSTFTYVLGDAETKEAIIIDPVDTMAERDAEMVLQMGLKPTLLLNTHVHADHITGTGKLKAALPSTKSVLSEASGGQADVKVNDGDKIRFGTRHVEARATPGHTAGCMTFVLDDKSACFTGDALLIRGCGRTDFQGGSSETLYASVKTKIFTLPNDCLIYPAHDYKGRHNSTVGEEKKYNPRLTKPVEEFVSIMSNLNLSYPKKIDKAVPANMVCGF 2302
            C+ S   +     FRQLF+ ESST+TY+LGD +T EA++IDPV   AERDA ++ ++G K T  +NTH+HADHITGTG+LK+ LP TKSV+ +ASG QA+V + DG+ +RFG   + A +TPGHT GC+T++  ++   FTGDA+LIRGCGRTDFQ GSSETLY SV  KIFTLP+   +YPAHDYKG+  +TVGEEKKYNPRLTK +EEFV IM NLNL YPKKID+A+PAN VCG 
Sbjct:   34 CMSSAMERNSNFFFRQLFDTESSTYTYLLGDTKTCEAVLIDPVIEHAERDANLIKELGFKLTYAMNTHMHADHITGTGRLKSLLPGTKSVIGKASGAQANVHLEDGEMVRFGNHQLLAASTPGHTNGCLTYICREQCIAFTGDAVLIRGCGRTDFQEGSSETLYKSVHEKIFTLPDHFTLYPAHDYKGQTATTVGEEKKYNPRLTKSLEEFVKIMDNLNLPYPKKIDQAIPANKVCGL 271          
BLAST of mRNA_H-canaliculatus_F_contig1521.3886.1 vs. uniprot
Match: L1IE15_GUITC (Lactamase_B domain-containing protein n=4 Tax=Guillardia theta TaxID=55529 RepID=L1IE15_GUITC)

HSP 1 Score: 307 bits (786), Expect = 2.530e-93
Identity = 147/230 (63.91%), Postives = 180/230 (78.26%), Query Frame = 2
Query: 1619 GLIFRQLFEKESSTFTYVLGDAETKEAIIIDPVDTMAERDAEMVLQMGLKPTLLLNTHVHADHITGTGKLKAALPSTKSVLSEASGGQADVKVNDGDKIRFGTRHVEARATPGHTAGCMTFVLDDKSACFTGDALLIRGCGRTDFQGGSSETLYASVKTKIFTLPNDCLIYPAHDYKGRHNSTVGEEKKYNPRLTKPVEEFVSIMSNLNLSYPKKIDKAVPANMVCGFCD 2308
            GL+FRQLFEKESST+TY+LGD  +KEAI+IDPV   AERDA++   +GLK    +NTH HADH+TGTGKLK  +P  KSV++E SG +AD+ +NDGD ++FG   +E RATPGHT GC+++VL+D   CFTGDA+LIRGCGRTDFQ G    LY SV +KIFTLP+ C+IYPAHDYKG  NSTV EEK  NPRLTK  EEF+ IM+NL L YPK+ID+A+P N+VCG  D
Sbjct:    7 GLVFRQLFEKESSTYTYLLGDEASKEAILIDPVVETAERDAKLAEDLGLKIIYGINTHCHADHVTGTGKLKQLVPGMKSVIAEKSGAKADMFINDGDVLKFGQHKLEVRATPGHTDGCVSYVLNDGVMCFTGDAVLIRGCGRTDFQQGDPGLLYESVHSKIFTLPDKCIIYPAHDYKGLMNSTVLEEKTLNPRLTKNKEEFIEIMNNLGLPYPKQIDRALPLNLVCGIQD 236          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1521.3886.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ30_ECTSI8.550e-22585.99Lactamase_B domain-containing protein n=2 Tax=Ecto... [more]
A0A835YKA0_9STRA3.180e-10150.43Beta-lactamase-like protein n=1 Tax=Tribonema minu... [more]
A0A7S0SPR9_9STRA1.180e-9952.83Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A1S3I4I9_LINUN1.270e-9865.81persulfide dioxygenase ETHE1, mitochondrial n=2 Ta... [more]
A0A812WIA5_9DINO1.300e-9752.65GLY3 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
I2CRD5_NANGC2.260e-9752.44Ethylmalonic encephalopathy 1 n=1 Tax=Nannochlorop... [more]
A0A7S4D913_HETAK2.370e-9767.51Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9CWP5_9STRA8.640e-9550.47Lactamase_B domain-containing protein n=3 Tax=Mono... [more]
UPI001E27C4161.660e-9361.76persulfide dioxygenase ETHE1, mitochondrial isofor... [more]
L1IE15_GUITC2.530e-9363.91Lactamase_B domain-containing protein n=4 Tax=Guil... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1521contigH-canaliculatus_F_contig1521:12009..22489 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score657.1
Seed ortholog evalue5.6e-186
Seed eggNOG ortholog2880.D8LQ30
Preferred nameETHE1
KEGG rclassRC02313
KEGG koko:K10803,ko:K17725
KEGG ReactionR08678
KEGG Pathwayko00920,ko03410,map00920,map03410
KEGG ModuleM00296
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0006950,GO:0006970,GO:0007275,GO:0008150,GO:0008152,GO:0009404,GO:0009628,GO:0009651,GO:0009790,GO:0009791,GO:0009793,GO:0009888,GO:0009960,GO:0009987,GO:0010154,GO:0016491,GO:0016701,GO:0016702,GO:0016787,GO:0016788,GO:0017144,GO:0019418,GO:0019748,GO:0022414,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0034641,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043603,GO:0044237,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0050313,GO:0050896,GO:0051186,GO:0051213,GO:0055114,GO:0061458,GO:0070013,GO:0070221,GO:0070813,GO:0071704,GO:1901564
EggNOG free text desc.sulfur dioxygenase activity
EggNOG OGsCOG0491@1,KOG0814@2759
EC1.13.11.18
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03029,ko03400
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionBeta-lactamase-like
Ec32 orthologEc-26_006340.1
Exons10
Model size3335
Cds size1308
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1521.3886.1prot_H-canaliculatus_F_contig1521.3886.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1521 13067..21462 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929260.8572237-UTR-H-canaliculatus_F_contig1521:12008..120851622929260.8572237-UTR-H-canaliculatus_F_contig1521:12008..12085Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1521 12009..12085 -
1696845740.4881132-UTR-H-canaliculatus_F_contig1521:12008..120851696845740.4881132-UTR-H-canaliculatus_F_contig1521:12008..12085Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1521 12009..12085 -
1622929260.8773758-UTR-H-canaliculatus_F_contig1521:12143..130661622929260.8773758-UTR-H-canaliculatus_F_contig1521:12143..13066Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1521 12144..13066 -
1696845740.5008366-UTR-H-canaliculatus_F_contig1521:12143..130661696845740.5008366-UTR-H-canaliculatus_F_contig1521:12143..13066Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1521 12144..13066 -
1622929261.039941-UTR-H-canaliculatus_F_contig1521:21462..224891622929261.039941-UTR-H-canaliculatus_F_contig1521:21462..22489Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1521 21463..22489 -
1696845740.5951314-UTR-H-canaliculatus_F_contig1521:21462..224891696845740.5951314-UTR-H-canaliculatus_F_contig1521:21462..22489Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1521 21463..22489 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929260.89235-CDS-H-canaliculatus_F_contig1521:13066..132521622929260.89235-CDS-H-canaliculatus_F_contig1521:13066..13252Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1521 13067..13252 -
1696845740.509649-CDS-H-canaliculatus_F_contig1521:13066..132521696845740.509649-CDS-H-canaliculatus_F_contig1521:13066..13252Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1521 13067..13252 -
1622929260.9043663-CDS-H-canaliculatus_F_contig1521:14067..141601622929260.9043663-CDS-H-canaliculatus_F_contig1521:14067..14160Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1521 14068..14160 -
1696845740.5194643-CDS-H-canaliculatus_F_contig1521:14067..141601696845740.5194643-CDS-H-canaliculatus_F_contig1521:14067..14160Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1521 14068..14160 -
1622929260.9195514-CDS-H-canaliculatus_F_contig1521:15441..155681622929260.9195514-CDS-H-canaliculatus_F_contig1521:15441..15568Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1521 15442..15568 -
1696845740.529706-CDS-H-canaliculatus_F_contig1521:15441..155681696845740.529706-CDS-H-canaliculatus_F_contig1521:15441..15568Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1521 15442..15568 -
1622929260.9383194-CDS-H-canaliculatus_F_contig1521:16466..166991622929260.9383194-CDS-H-canaliculatus_F_contig1521:16466..16699Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1521 16467..16699 -
1696845740.5415063-CDS-H-canaliculatus_F_contig1521:16466..166991696845740.5415063-CDS-H-canaliculatus_F_contig1521:16466..16699Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1521 16467..16699 -
1622929260.954282-CDS-H-canaliculatus_F_contig1521:17389..174531622929260.954282-CDS-H-canaliculatus_F_contig1521:17389..17453Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1521 17390..17453 -
1696845740.5511644-CDS-H-canaliculatus_F_contig1521:17389..174531696845740.5511644-CDS-H-canaliculatus_F_contig1521:17389..17453Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1521 17390..17453 -
1622929260.9667408-CDS-H-canaliculatus_F_contig1521:18276..183711622929260.9667408-CDS-H-canaliculatus_F_contig1521:18276..18371Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1521 18277..18371 -
1696845740.5598764-CDS-H-canaliculatus_F_contig1521:18276..183711696845740.5598764-CDS-H-canaliculatus_F_contig1521:18276..18371Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1521 18277..18371 -
1622929260.9775484-CDS-H-canaliculatus_F_contig1521:19207..192781622929260.9775484-CDS-H-canaliculatus_F_contig1521:19207..19278Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1521 19208..19278 -
1696845740.5687046-CDS-H-canaliculatus_F_contig1521:19207..192781696845740.5687046-CDS-H-canaliculatus_F_contig1521:19207..19278Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1521 19208..19278 -
1622929260.997918-CDS-H-canaliculatus_F_contig1521:19825..199501622929260.997918-CDS-H-canaliculatus_F_contig1521:19825..19950Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1521 19826..19950 -
1696845740.5769098-CDS-H-canaliculatus_F_contig1521:19825..199501696845740.5769098-CDS-H-canaliculatus_F_contig1521:19825..19950Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1521 19826..19950 -
1622929261.0121913-CDS-H-canaliculatus_F_contig1521:21148..214621622929261.0121913-CDS-H-canaliculatus_F_contig1521:21148..21462Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1521 21149..21462 -
1696845740.5849197-CDS-H-canaliculatus_F_contig1521:21148..214621696845740.5849197-CDS-H-canaliculatus_F_contig1521:21148..21462Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1521 21149..21462 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1521.3886.1

>prot_H-canaliculatus_F_contig1521.3886.1 ID=prot_H-canaliculatus_F_contig1521.3886.1|Name=mRNA_H-canaliculatus_F_contig1521.3886.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=436bp
MVRVSVSLIFSRRKNDTPFTLLTPVSLSTSWDHIASVSAATQANETGNLV
NDLYPSELLRTWFGYQVGPDGDFAGATKDVASLVYLCKPEEGCLTAEDWE
SSSHKQRLDLPLGPGLFEVRSALKAVDEMSKMAKPMLFMCKSANRAGAMA
SVFQGCRSGWSAEQTLDWAKPLGLKFLTTPAMVEWVSACVDSRFPKGGLI
FRQLFEKESSTFTYVLGDAETKEAIIIDPVDTMAERDAEMVLQMGLKPTL
LLNTHVHADHITGTGKLKAALPSTKSVLSEASGGQADVKVNDGDKIRFGT
RHVEARATPGHTAGCMTFVLDDKSACFTGDALLIRGCGRTDFQGGSSETL
YASVKTKIFTLPNDCLIYPAHDYKGRHNSTVGEEKKYNPRLTKPVEEFVS
IMSNLNLSYPKKIDKAVPANMVCGFCDEDGVDGSK*
back to top

mRNA from alignment at H-canaliculatus_F_contig1521:12009..22489-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1521.3886.1 ID=mRNA_H-canaliculatus_F_contig1521.3886.1|Name=mRNA_H-canaliculatus_F_contig1521.3886.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=10481bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1521:12009..22489- (Hapterophycus canaliculatus Oshoro5f female)
CAAAGTGTCCGCGATGCGCTTGCAAATGACACCTAAAGTCGACCAAATTC AATTTTAAACTACGGTGGGTAGGAAGGAATGTGCATGACTATCCGTTTAC CTCCTCCGAATGTACGTCAGAAAATTCCCACTGGTTGCGCATCAGATCTA GCAAAGAGGTCCTCCCTGACAGAAATGACGAGGTCGGCCGTCGTTGGGGC TCGGTATCGGGATGGTGCCGTTATTTTTTGTCAGAGAAAACTCGGATAAT GTTGGCAACAACTGCAGTTTGAAAAGTTTCCAACGTCTCAAAAGCGTGAA CTTGAGAATTGTCAAAATTACACCAAGGAAAAAGCGGCGCCAAACTTTCA ACGAAGCGTACGGGGGAAAGCTCCCCTGGGGGTTGCCACAGGTTGGTTGT TGGTTACCTCGCCTGAGATATGTCTGATACTGCTGTAGCAACACGAATGA AGTCTGCTTGTCCTATTCTGTTCTACGAGTATTCTGTTCTGTTCGGGGTG CCATGGCGAGAGGTGAAAGATGAAAGATGAAATATGAAATCGTCATGCAG ATGAGAAAGGTCGAGTATCGAGGTGGGTTTCGGATGTCGAGCGTGCCTCA GGTAGCGTGAGAATACCAAATACCGCAGATCTATTGCTTGTGTTGGATGT TTGTCTCGACACTTCGTTACACATGCCAGCGTGGTACGATGTATTTTCTT GAAGGGGTTGATTGATTGGTTCCCATGCCGCCCTCTTCGCTGAGTACTAC CGGAAAACTTTACACGCTGCCCGCTGGGGAAGCATGGGTAATCTGAAAAT CGGCCGTAAGTGGGGTGGTGAAGTATGCTATGCTATGCTATGCTATGGTT TGATTGTCTCTCACATCTCAAGGTTTTCCAGGATGTGCCGTAGTTCGATG ACGCACGTCGAATTGATGACGAACTTATTCTCCCACGGCCTTACCGTCTA CTTTCGTCAAGAGTCTATGCTCACAGTTAGCATCATCGTGAAGTATTGTA CCAAGTCAGGGAGGGTATGATCTCTACATGGTGAGGGTTTCGGTATCCTT GATTTTCTCTCGAAGGAAAAATGACACACCCTTCACGCTGCTCACGCCCG TCTCACTGTCTACCTCTTGGGATCACATCGCTTCAGTGAGCGCGGCAACG CAAGCCAACGAAACGGGCAACCTTGTGAACGATCTTTACCCTTCTGAACT ACTTCGTACATGGTTTGGGTACCAGGTAGGGCCGGACGGAGACTTCGCTG GTGCTACGAAAGACGTGGCCTCTCTGGTGTACTTGTGTAAGCCGGAGGAA GGCTGCTTGACGGCTGAAGACTGGGAGAGCTCGTCTCACAAGTGAGAAGG GGCGGTTCCCGTAGAAAAAAAGAAACGCCACCGTCGAACACCGAACACCC ATAAGCTGCTTCACCAACAACGAACCAAACGTTTTTTCGTCCGTAGCTTG CTGTCTTGGACACGGCGCCAGAGAACACTACAGTGTGCCCGCGCAGCGAT TAATAGCCTGCGCCTGCGGAACCATCCTTCGGGCTAGATGGGCCGGAGTC GGGAAGGCACTCCACCGACGGGGAAAGCCCATACGCGCTGAGGCACCATC AGGCAACAGTAGAGACGACAGCAGCTGTAGCAGCAACAGCAGCAACAGCA GCAGCAGCAGTTTTTGCAGCTGAAGATTGAAGGCTTCTTCGAGGTGTCGT CCGGCTTCGGATCCACTCCCTCCCCTTCGGCTCTTTCTCCTTCACGTCGT GCGCTTACTGCGGTGGAAGCAAGGCCATAAGATTGAAACGTTGGAGAAAG TGCAGCATGCTACTCCTGTAGGCTACTGGAGCAGCGCTTCCAAATCCCCC GCAGCTGTAGTAGGGCGAGCGGGACTCGGAGACTTACATCCGTCCTAAAG GGCGAGCGAATATGGTATCCATCGTGTCCATCCTCCATCTAGCAGCCCAG TGCTTTGTTTGTGCTTGTGAAGGCGGTGTTCCTACGCCACATGGGCCGGT GTGCTGGCCGTCTGGTCGAGTGTCGATCCAGACACGGATGCCAACAAAGG CGCAACTTGCACACAGGCGTACGCATGCGGCCGGTGTGCTCCTCAGCCTA CGCCACCTGCGCAGGCTACGCAGCCGAAACACTGAGCAATGGGGCACATG TTACGGTGCTACACAGGGCTGATGATACAGGCGGTACATGAGGTTGAAAG ACGAGATTGGCGAAGCGCGCTTTGCCGCCCAGGTCGAGGCGTCAAAAGGA CTCGTCTTCAAGTTGAAAGCTGTTGTGGAGGCGTTCCAATCATACTGGCA TGCCGGAGTCCCGCGTCGAGGACGAAAGTTGTAAAATAAGGGGGATCGAC GGACATCGCAAAGCAGTCTAACCGTGAATTTGGAGCTGACGTTCCGAACT GTTCCATACTGCTGCCCCACATGATTGTGCATCGTGTTTTGGAAAATAAG CGACTAAACCTGCTTGAAACAGTACACGAAAGCGGCTGTTCAACCTTGCA TTTGCTGAGCTGTAGTGTGACATATCTTTGATGATGCAGGCAGAGGCTCG ACCTACCTCTGGGCCCCGGGCTGTTCGAGGTTCGCAGTGCTCTCAAGGCC GTAGATGAGATGTCCAAGATGGCCAAGCCCATGCTCTTCATGTGCAAAAG CGCGAACAGAGCCGGTGCGTGCAATGGATTGCGAGCACCATCAAGGGCCT GCCAAGCTCGTCGAAACTTGTCACGGTTTGATATCTCTCAATGCTCCAAC GTGTAAACGAGTAGCTTCGTCGGGGCGGGCGGTTCTTTGTGTCATGTAAT GTCCGGCCTCTGTTGCAGGTGAAACGTAACCACAACACCTTGAGCAGCGC TCTGCTCCGAACTGCGCGAATCGGTATTTTTTGGGCTCTCAAGGCTGGCC ATGTGCCGGTTACCAGGAACCAGGAACGCCCAACTCTTGCTGCCGCTTGA CAGAACCGCCGCCTTTCCTCTGGACTTCCACCGAGCGGACCTTAGAGCAC ACCTCATCTGTTGGAGCCTCGGACTCTTGTTCGCTTTAAGACGGCCACCA AATGAAGGGCTTTCCCTGTGCACTTGCTATCCGTTGCAGCTGGCCCTGGC CCTGTTATTTACCCTGTTCCCTTCCTCACCCCCCATCTCCACCCCACCCA CATCCTAGCCCCAAATCTAACTTCGACCAGAACCTGACGACAATGCTAAC CGTACACACAGGTGCCATGGCGTCTGTGTTCCAAGGTTGCCGTTCGGGGT GGTCGGCGGAACAGACGCTTGATTGGGCCAAGGTGTGCATCTGCAGCAGG CAGTAGATGAAGGAGTATATGAAGATGTAGATGCAGATGCAGCGCCAAGT AGTGCTTCGTTGCGTGTGCAGCGTTTTCAGGAGAAGGCGGCGCGGTGTGA GGCGTATTTCACCAACGGCGTGCCCGATGCGTGAAGCTTTGCTCCAAGTC GCTCTTGCCCACCGTCGACAACGCTCGACAATGCGCGTGTCCCATTTTTC GGCATTTCTTCTTCTTACGGAAATCGTTTCAACGTTTGGCGGACCGTGTG CCCCACACGTTCTGATTCCAGGTAACCTTCGTTCGCTGTCCGTTCGAGCA ACATCTGTCCGCTGAACAACACGACCATTTCCATGCGTCCCGTACTTTGA TATCTATGTCCAGCCTCACTCTCCTCTCGGTCGCGTCAGCTTTGCGTCCA TTCCAGGCGCTGGAGCCTCCCGGGGCAAACACACATGTATCGATAGCTCC GTGCGGTTTCCCTCGCAAACTCTCTTGAAGCTATCCCTGGCGCACCCGGC GGCACTCTTGCGGTCCCTAACTCACTTTCACCTCTTCTCGACGCCCGACT CGACTCCCGCCGGCCGTGTTTCGCTGAGCACCGCACCCCCTCTACCCCCC CTCGCCATGGTGCGCCACGATCATGGTGTGGGCTACGCGAAAAGAAGCAA GAAGCGCATGTGCATGTGCATGTGCCCGGAATTTTGGGGTTGGGACACCG GAGCTTAGTTGTGACTGACATGAGCCGACCATGCCCCGAAGGATCCTAGT GCAAGCACCAAGTGATGACCTCCCGCTCCGCCCCGCCTCCCCTCGCCCCC GCACAATGTGTCGAACAGCCGCTTGGCCTCAAGTTCTTGACGACCCCGGC GATGGTGGAATGGGTGTCAGCTTGCGTTGACTCTCGCTTTCCGAAGGGCG GGTTGATCTTCAGGTATGGTAACCCAGACTTGGAATAAATAATACTCCGT ACTTTGTACAGTACGAGTAAACGCAGAAGCGAGAAGCGAGATGTGGATAG CTCAGCTTAGCGAGGTTCTTTCATGACCGCCACCAGCACAAGATCAAAAT TTCGCCGAACGGAACTGCGTTTTGCTAACGGCATTTTGTTCCCACAAAAC ATGCGAAGAGTGGCAGAGAGTGTTTTGCTTGCCAAAGGTTTTTGCGGACT ACGCGGTCCCCACACAATCTGTCTTGCAAAAAGAAAAGGGACGGACGTGC AAACCCGAGACCGAGTAAGTGGCCAACGCTCGCCCTGCTTGACAGGGGCG TATCCGAGCGCCCCTCCTGCGTTCGGCGTTCGGTTGAAAGCTCTGCCTTC CTGTCGGTCGAACATCACCAGCTCGAGGCACGCAGCTACTCCGGAGTACT TGTTGTAGAATCCGGTGCTTGAAGGCACACCCTGACGGGGCGGGCTGATG CATGTGAAAAGCTCAAACTGAGCTCCAAGTGTGCCCTTTGTCTGTCTTTT ATGTTGCATGATATACCGTATTGCTTCGTGTGCGGCCTCCGTTTTTGACT GATCGCTGGGTTTCAGGCCAACAGAGTAGTTTTGAATAGGTTATCTTAGC GCCATCACGCGGCTGGTCTCACTACACTTGTCCGCAACTGCTTGGCTGCT CTCACCCGCTTTCATCAAGGAGCTACCCCGTTGAACACAGCTACCTGACC CAGCGCCCAATGACCACTCTGGTCGCTGCCTTGACCGTCCTGCACTGTCC TGCACTGCTGCACTGCTTTCCGAATGTCACCGGCAGGCAACTGTTCGAGA AGGAATCGAGCACCTTCACGTACGTCTTGGGTGATGCAGAAACCAAGGAG GTTTGTAAAGAACTCAACACACACACACACACACACACACACACACACAC ACACACACACACATACACACACACACACACACACACTCGCTGGAGCTTGG AGTTCTGGTACGCTCTTCGATATATCTTTGGGCAGATCAAGACATGAAGA CGAGCACGTGATGAAGCACGTCGCTTGATCAGTTTTCGTTGCTGCGTTTT GCGCCTCACCCTTAGCCATTGCACATGGATGTCTTGTGGCAGCTTTTGGT AAGCATGTTAAGCCTCGCCTCAAAGCGCACGTGCACAGACACAGACGCAC ACAATCACGTTCGGAGAGAGCGAGAGAAAGAGGGAGACAGAGGGGGAGAG ATGGCACACCGCGACACAGCAGCAGTCGGTTGCACACGCCACGACACGCT TGTGCTGTACTGCACCACTTTTGCAACGTTTTGCGATTATTTTTGTTTTG GGGTTATTTTTCAGGACCCCACAGCTTTCCGGGATCGATTAACTAAGGCA GGCACGATGGAAGAAGGGCGACAGGCCTAAAAGGAGAGAAGCCCTGTTGT GCGACCCGGGATGTACTCGCCCAGTGCATGCCCAGATCAAACGTGCTGAA GAACAACAGCTCTCCTCCCCTCTTGCCCCACCAACTTGTCTCATCGGTTT TCGCTACCGCTGTTGGCGTTTTCCGCTCGTGTTGCTACAGGCGATCATTA TCGACCCCGTGGACACGATGGCTGAGCGCGACGCGGAAATGGTATTACAG ATGGGTCTGAAGCCAACGCTGCTGCTCAACACGCACGTGCACGCGGACCA CATCACCGGCACCGGCAAGCTCAAGGCCGCGCTACCTTCGACGAAGAGCG TGCTGTCAGAGGCGTCTGGGGGGCAGGCGGATGTGAAGGTTAACGACGGC GACAAGATTCGTTTCGGGACAAGGTGGGTGTCATCTCGAGTTCTCGTGCG TGGCCGTGTTCAACTTTGTCGTGTTTTAAAGAAAACATAACACCGTTGGA ACACCTCCTGAGGTACGTCGTACGAGGCGTAGCTCGAAGCTTCGGATGAG CTCCAAACAATAAGGGTTCGTTGATGTGAAAGGTTGGGACAAAAGCATGA ACAGGACCGGTTTTTGTGTAACTTGCCGCATTTTCTACGTAATACGACGT ATAAAATGTACGGAGTAGCAGTCCTTCGGAAATCGACTTGTTCTCATCGT AAACTACAGGCCATGTAATATACGAGAATTCACGAGAGTACTTCCTGTGA TGAGACACGAAAACTGTGGTGTTAAATCGTCTCTCTGTCTTCCCCCCTTC TTCTTCTGCCTGGCGTGCACCCTCGTCTCGGGAGGAGTGTTGTGGCTCCG AAGGAATGGGTGTGGGTGGGTGTTAGATGAGACCACCCTCGAATGAATGA GAGGAGTGAGTATACTGGTCAGGTCTCCTCGACAGCCAAGCCGACGCAAG GGAAACCGCACCGTTCCACTCCACCGTCTTGAACATCTACCCCGAGGAAG GGTCGAAAAATGGGCACTCTTTCATCACTGTCTTGAGTATCATCTCATGT ATCGTCGTGTGTATAATCTTCGTGAATCATCTTTTGCATCATCTTGTACC CCTGCCTCCCTCGCACGGCACCCTGTCATACCATGGCATCTATTTCGTAC GCGACTTCTTCAACCCCCCGCAGGTTTTACGTGTAGCGCACCGTGCACCA GGCTGCACGTCGCTGCACCGCACTTTGCTTTTCGCTCCCACACTGCGCCA CACATCGGCCTGAGCCTTCCCATCGCAAGAGACTTCATCAACACGTGAAA TTGCCAACCCGTCTGCCCTAGGCACGTCGAGGCGCGCGCGACACCAGGCC ACACGGCTGGGTGCATGACCTTCGTCCTCGACGACAAGAGCGCCTGCTTC ACCGGAGACGCCCTTCTTATCCGCGGCTGCGGTAGGACCGATTTCCAGGT GAGGTTGAGGGCAAACTCATCCAGGACACCGAATCTAAATGTTAGAAAAA GCGACCCAGGCGAAGCTTTACGTGGCGAATGGCAGGAAATTACGAGAAAA CTTACTGCGGAGGTTGATCGTGTTGACCGGTTTCAGATAGCGTCTGGGAC GGTGAGCGAGAGACGCAGACGGATAGACGGATGAAAAAGTGAAAACAGCG GCCCTCTAAGATGCCCGCAGACCCCAAACGGGTATGATAGTATCACGACA TCTCTCACGTGTGGCGATTGATCTTTGATACAATGACGCTATGATATTAA AAAAGAGATAGTGGAGGGCGTAAGCCGTGGTCGTTACCCATTCCATCACC CCACCCTCATCCACTTTGTCAATTTGTGTTGGTTGCATTCCCCCGGTATC GTACCATCGATCGGGAGTTCGAAGGGTCAGAGCTATGATTTTTTGCCTGA CGCCACTCATTTCTTCTTGTAAATATGTTCCTTGGGTGAGGATTCAAAGG GGGTTGTCAACACGGATGTCGTACGCATGTTGATGATTGGGATGCCAGGG AATTCAGAAATGACGGCGAGGAGGAGAAAACTAGAGAGCTGACGATATCG ACTACGGTACTGTTGAGACGTTGAGAGTAACTGGGGCAACAGGAATGAGA GTAACACGAACCATGTTATTACGTGCAGACCAGGGGAGACTCCTGGTTTA AACACCCGGATCCAGATGCACTAGATGCACTAGATACACTAGATACACAT CACTCGACACAATAACGCCCTCATCATCTACTGTTCCTCACACAACGTGA ATTGCATCCATCGACCTGGCTACACCGGTGGTCTTCGGCAAAGTTTGCGT AAGGTTGGGTTGATGGGATGTTGATAACACGCGAACACAAGCGCAGCCAC CCCGTACGGACACATTTCAGATCTCGTTTTTGTAGACACGCCTTTGGTTC TAAACGCGTGGCGTGCCAAACTCGTGTGGCAGGTGGAGGCCAGGTGGAGG CCACGAACTCCACCTTTCGTTGATCGCGGATTGTCGAGTCTCAGTGTTGT CTGGCACGTCCTTTTTGCCCGTTCCCACCTGGTGCCTTCAAGACCCGCGA CGGCATGTGGACGTCAAGGTGCAACGGTATTCACCAAGTATTTTTGTTTG TTCGAGCACCTCGAAAGGTGCAGGACGAAACGTGACGCAACTGACGAGCG CTGACAATGTGCGTGATATCCTATCCGTATCTTCGTTTTGCCTTTCGTGT CATGCCGGGTTTTGATCGTATGCACGCAGGGCGGGTCGAGCGAGACTCTG TACGCGTCCGTGAAGACCAAGATCTTCACCCTGCCTAACGACTGCCTTAT CTATCCCGCACACGACTACAAGGTGAGACGCGATTGATCGGTTGTCTCTG TAGTGACGACTTGACGGAGAGATTTTCGCGAAGCTGCGAGACAAGTTCGA TGCGTTGGGTAGCCAATTTCGCACCATTTTCGAACACAGATGCAGCGTCA TACCATCCGGGCACCGAGGAACACACGGTGCGTGTTTTATCATAACGGCT GGAGATACATAGGATCTTTCTCGCTCTGACCGAAACACAACTCCCGCGAC AACTGTTCTCACTCCGATTCCAGCCAGAAAGTTTCCCTCCACGTTACAAA TTTCAACAGCAAATGTAGCTGCAATCTCCCGGTGTTAATTCAACGATTGT GCAGGACTCCCGTCGGGCAGGTTAGCTTATTTCCACGAGCCTGGCCGAAT CATTAGAACGGACTGAATGGACTGTACTTCCTCAGCGTCCGATTGATCGA AGAAGGAAGTAATGACGTGCCCTCTTGCTTGGTGTTGCTATTGAATGCAA TGTCCATCGTATTACAAACAAGCAAATCGGCTTTCTTAGTTTATTCTTCA TTTTTTTCATTCCTGGTGCTGAAGTTTGGCCGTTTGAGGCATCGCATCCC CACCACCTGGTTCCGCATGAAGCTCGCGTGGACTTGGGGAAGGTGCTGCA CAAGGTCAACACTGCAGCTGCACCACCGGTGTCGCACAAATCAAGTACTG TATTTAATGTATATCTTCTGCATCTGTTAGCAGCGCAAGATACTAAGTCA ACCTTCTTTGTTTTCACATTAGCAACCGACGGGTTCTTCTAGCCACAATT TGATTTGACCGCTGGCAACTCGTGACGCTATTTGCAGGGTCGACACAACA GCACCGTGGGCGAGGAGAAGAAATACAACCCCCGCCTGACCAAGCCTGTC GAAGAATTCGTGTCCATCATGTCCAATCTCAATCTGTCCTACCCGAAGAA GATCGACAAGGCCGTTCCAGCCAACATGGTTTGTGGTTTTTGTGATGAAG ACGGAGTCGACGGCAGCAAGTGAAGAGAAAACAATAGACGTGCCATTCGC ACGTCGACGGTGTTTGTGATGAAGATCGCCAAGGTCGTTGATGAGGTCAA GGGAGACCTGTTTTTAGCGGTAAGCTCAAACGGCAAGTGCAAAGAGCCAT CCTGTGCCGTGCCCAACTCGATGGTATTGTCAAGGGGCGGCGGCGGCTCA CAAAACGCTTTGACTTGAAGCTTCATGGCCGCGCCAATAATCAGCTCATG ATCAACGGACTTTCAGTAACCCATCCAGGTCAAGATGGTGAAAAGTCGCT GGGATTTGTTGCTATATAGGGCCACATCACACATCACACGTCGTTCTAAT GTAATTCATGCATAGCGTGCATTTTGTTGGCTATTTTGTTGGCTGTCTGT TTGCTGTTTGCATTTCGGACGGAGGGAACTGCTGCTGCGGGCTGCGGCGA GGGATGGCGATACCTCACGCGATACGCAGGCGACAGAGTAGTGTGTGAAG CACAAAGAAATCATGTGGATGGCTACAGCTCGCTCCTTGGCACACGTCTG TGTGAAAAGTGTTGAAGCATGTGCACGGTTTGAAAGACACTGCAGTTGCT GGGCAAGAACTACAGAAAGAAAACAGCGTGCACTTTGGTTGCAACAGTCC CTGTGTGAGATCCATTCTACGTGTATTTATGTTCCCTGTATTTCGGGTCT TGGAAGGTGACATGATGACTGGAGTAGAGGGTCGCTCACCAGGCAAGGTG AGCATTGAAGCTCAGGATTAAGCTTGACCACGCTGCCTATGTCCCTGAAG ACCTCTTGCAAGGCGCAAGCCTCGAGCGTGTGCATGGTTTCCAAGCGCAT CGCCAAATAAATACATACCTGGTACGTATGTATATGTGTTGCTCATGTGT GAAACGCGCGGAAAAATCACTCATCTGACTTGTGTGTAAGGAGCTCAATC GCGCCCATCGACATGCCCTCCCTCTGTCTACCTCCACTGGCCATGGTTCG TTTTGCTTCGGTAAACACCAGCACGCGAGACACCCTTCTTGGTTCGTGTG CAGGGCATGGCTGGAATTCAAACAACTTCAG
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1521:12009..22489-

>mRNA_H-canaliculatus_F_contig1521.3886.1 ID=mRNA_H-canaliculatus_F_contig1521.3886.1|Name=mRNA_H-canaliculatus_F_contig1521.3886.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2616bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1521:12009..22489- (Hapterophycus canaliculatus Oshoro5f female)
ATGGTGAGGGTTTCGGTATCCTTGATTTTCTCTCGAAGGAAAAATGACAC
ACCCTTCACGCTGCTCACGCCCGTCTCACTGTCTACCTCTTGGGATCACA
TCGCTTCAGTGAGCGCGGCAACGCAAGCCAACGAAACGGGCAACCTTGTG
AACGATCTTTACCCTTCTGAACTACTTCGTACATGGTTTGGGTACCAGGT
AGGGCCGGACGGAGACTTCGCTGGTGCTACGAAAGACGTGGCCTCTCTGG
TGTACTTGTGTAAGCCGGAGGAAGGCTGCTTGACGGCTGAAGACTGGGAG
AGCTCGTCTCACAAATGGTGAGGGTTTCGGTATCCTTGATTTTCTCTCGA
AGGAAAAATGACACACCCTTCACGCTGCTCACGCCCGTCTCACTGTCTAC
CTCTTGGGATCACATCGCTTCAGTGAGCGCGGCAACGCAAGCCAACGAAA
CGGGCAACCTTGTGAACGATCTTTACCCTTCTGAACTACTTCGTACATGG
TTTGGGTACCAGGTAGGGCCGGACGGAGACTTCGCTGGTGCTACGAAAGA
CGTGGCCTCTCTGGTGTACTTGTGTAAGCCGGAGGAAGGCTGCTTGACGG
CTGAAGACTGGGAGAGCTCGTCTCACAAGCAGAGGCTCGACCTACCTCTG
GGCCCCGGGCTGTTCGAGGTTCGCAGTGCTCTCAAGGCCGTAGATGAGAT
GTCCAAGATGGCCAAGCCCATGCTCTTCATGTGCAAAAGCGCGAACAGAG
CCGGCAGAGGCTCGACCTACCTCTGGGCCCCGGGCTGTTCGAGGTTCGCA
GTGCTCTCAAGGCCGTAGATGAGATGTCCAAGATGGCCAAGCCCATGCTC
TTCATGTGCAAAAGCGCGAACAGAGCCGGTGCCATGGCGTCTGTGTTCCA
AGGTTGCCGTTCGGGGTGGTCGGCGGAACAGACGCTTGATTGGGCCAAGG
TGCCATGGCGTCTGTGTTCCAAGGTTGCCGTTCGGGGTGGTCGGCGGAAC
AGACGCTTGATTGGGCCAAGCCGCTTGGCCTCAAGTTCTTGACGACCCCG
GCGATGGTGGAATGGGTGTCAGCTTGCGTTGACTCTCGCTTTCCGAAGGG
CGGGTTGATCTTCAGCCGCTTGGCCTCAAGTTCTTGACGACCCCGGCGAT
GGTGGAATGGGTGTCAGCTTGCGTTGACTCTCGCTTTCCGAAGGGCGGGT
TGATCTTCAGGCAACTGTTCGAGAAGGAATCGAGCACCTTCACGTACGTC
TTGGGTGATGCAGAAACCAAGGAGGCAACTGTTCGAGAAGGAATCGAGCA
CCTTCACGTACGTCTTGGGTGATGCAGAAACCAAGGAGGCGATCATTATC
GACCCCGTGGACACGATGGCTGAGCGCGACGCGGAAATGGTATTACAGAT
GGGTCTGAAGCCAACGCTGCTGCTCAACACGCACGTGCACGCGGACCACA
TCACCGGCACCGGCAAGCTCAAGGCCGCGCTACCTTCGACGAAGAGCGTG
CTGTCAGAGGCGTCTGGGGGGCAGGCGGATGTGAAGGTTAACGACGGCGA
CAAGATTCGTTTCGGGACAAGGCGATCATTATCGACCCCGTGGACACGAT
GGCTGAGCGCGACGCGGAAATGGTATTACAGATGGGTCTGAAGCCAACGC
TGCTGCTCAACACGCACGTGCACGCGGACCACATCACCGGCACCGGCAAG
CTCAAGGCCGCGCTACCTTCGACGAAGAGCGTGCTGTCAGAGGCGTCTGG
GGGGCAGGCGGATGTGAAGGTTAACGACGGCGACAAGATTCGTTTCGGGA
CAAGGCACGTCGAGGCGCGCGCGACACCAGGCCACACGGCTGGGTGCATG
ACCTTCGTCCTCGACGACAAGAGCGCCTGCTTCACCGGAGACGCCCTTCT
TATCCGCGGCTGCGGTAGGACCGATTTCCAGGCACGTCGAGGCGCGCGCG
ACACCAGGCCACACGGCTGGGTGCATGACCTTCGTCCTCGACGACAAGAG
CGCCTGCTTCACCGGAGACGCCCTTCTTATCCGCGGCTGCGGTAGGACCG
ATTTCCAGGGCGGGTCGAGCGAGACTCTGTACGCGTCCGTGAAGACCAAG
ATCTTCACCCTGCCTAACGACTGCCTTATCTATCCCGCACACGACTACAA
GGGCGGGTCGAGCGAGACTCTGTACGCGTCCGTGAAGACCAAGATCTTCA
CCCTGCCTAACGACTGCCTTATCTATCCCGCACACGACTACAAGGGTCGA
CACAACAGCACCGTGGGCGAGGAGAAGAAATACAACCCCCGCCTGACCAA
GCCTGTCGAAGAATTCGTGTCCATCATGTCCAATCTCAATCTGTCCTACC
CGAAGAAGATCGACAAGGCCGTTCCAGCCAACATGGTTTGTGGTTTTTGT
GATGAAGACGGAGTCGACGGCAGCAAGTGAGGTCGACACAACAGCACCGT
GGGCGAGGAGAAGAAATACAACCCCCGCCTGACCAAGCCTGTCGAAGAAT
TCGTGTCCATCATGTCCAATCTCAATCTGTCCTACCCGAAGAAGATCGAC
AAGGCCGTTCCAGCCAACATGGTTTGTGGTTTTTGTGATGAAGACGGAGT
CGACGGCAGCAAGTGA
back to top