mRNA_H-canaliculatus_F_contig1519.3873.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1519.3873.1
Unique NamemRNA_H-canaliculatus_F_contig1519.3873.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1519.3873.1 vs. uniprot
Match: D7FPE6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPE6_ECTSI)

HSP 1 Score: 707 bits (1825), Expect = 5.720e-244
Identity = 460/617 (74.55%), Postives = 498/617 (80.71%), Query Frame = 1 
Query:  454 RRADVDKSLGSQNDKLKSNYDAIRTELIHLREKHNNTRKQLLEAVENRVEADQRTETLVAKWKVQLEGRTRELESLQAKLVPQDLDMLRAKVQEELEVPQQRRVALLEAEVERHRQMYCKARREHERCKAEYEQYTIDQGREMEAVHQQHKSESHVLKMRVQDLEASFADADRDQEGRLLRRQLEEAEAAKSQLHAEVAAVRSQREAAELERHKLVLAHQSEAAATHVRVSTLEAEKKAVQRRCGEAEETAARRHRQAEEVRDRLQDALEEVSRFREACTGKDRVALEVRDEARHAAERLALEWGREKAELKAANEGLIKRIALVERRSREASDQAASRFRVAQQLEERVRHDAQKEAAALRGGLSRLEAEVERLXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRVLREKEALRERVAALQSAADRAVEAAEAASRDRDETRVAAATMAQRAQQEREGLAEMEGENEGLRVRLQMAEEELRSLVAEADQAREAHVRALKDIRRTAGAERDSHVARVRYELETLRRRARXXXXXXXXXXXXXXXXXXXXXXXXXRTRHLLQSRATAXXXXXXXXXXXXXAAMGARWRGLGQPGVGHGGGAGGGRIGMDSTSSTFGAV 2304
            R   V +SLGSQNDKLKSNY+A+RTELIHLREKHN TRKQLLEAVE+RV+ADQRTETLV KWKVQLEGRTRELE+LQAKLVPQDLDMLRAKVQEEL+VP QRRV  LEAEVERHRQM+CKARR+HERCKAEYEQYTIDQGREMEA+HQQHK+ESHVLKMRVQDLEASFADADRD+EGRLLRR+LEEAEA K+QLHAE+AAVRS+REAAELERHKLVLAHQSE+AATHVRVSTLEA+KKA+QRRC EAE+T  RR RQA++ RDRLQDALEEVS+ +EAC GKDRVALE R E RHAAERLALEWGREKAELKAANEGLIKRIAL ERRSREAS+QAA+RFR AQQ+EERVR +  KE +ALR  LS+LEAEVERL            XXXXXXXXXXXXXXXX    LREKEALRERVAALQSAADR+ EAAE A R+RDE                E LAE+EGENEGLR RL+MAEEEL  LVAEADQAREAHV ALKDIRR AGAERDSHVARVRYELE+LRRRA                          RTR +LQSRA+A   XXXXXXXX   A      GLG+P  G G     GR  MD TSSTFGAV
Sbjct:   43 RTVGVCQSLGSQNDKLKSNYEAVRTELIHLREKHNTTRKQLLEAVESRVDADQRTETLVHKWKVQLEGRTRELEALQAKLVPQDLDMLRAKVQEELQVPHQRRVGSLEAEVERHRQMFCKARRDHERCKAEYEQYTIDQGREMEALHQQHKAESHVLKMRVQDLEASFADADRDEEGRLLRRKLEEAEAVKAQLHAEMAAVRSEREAAELERHKLVLAHQSESAATHVRVSTLEADKKALQRRCAEAEDTTDRRRRQADDARDRLQDALEEVSKLKEACAGKDRVALEARAEVRHAAERLALEWGREKAELKAANEGLIKRIALAERRSREASEQAANRFRAAQQVEERVRSETGKETSALRESLSQLEAEVERLRLEGERVGSSAQXXXXXXXXXXXXXXXXXXXXLREKEALRERVAALQSAADRSEEAAEGAGRERDEAXXXXXXXXXXXXXXXECLAEVEGENEGLRERLRMAEEELAGLVAEADQAREAHVSALKDIRRAAGAERDSHVARVRYELESLRRRAHRSVRKERKRSRAYKAQAIEAHQRGQRTRQVLQSRASALALXXXXXXXXRAPAAPLTGGGLGEPAGGRGRERMIGRTPMDCTSSTFGAV 659
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1519.3873.1 vs. uniprot
Match: A0A835YNG1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNG1_9STRA)

HSP 1 Score: 200 bits (509), Expect = 7.780e-51
Identity = 139/299 (46.49%), Postives = 183/299 (61.20%), Query Frame = 1 
Query:  454 RRADVDKSLGSQNDKLKSNYDAIRTELIHLREKHNNTRKQLLEAVENRVEADQRTETLVAKWKVQLEGRTRELESLQAKLVPQDLDMLRAKVQEELEVPQQRRVALLEAEVERHR------QMYCKARREHERCKAEYEQYTIDQGREMEAVHQQHKSESHVLKMRVQDLEASFADADRDQEGRLLRRQLEEAEAAKSQLHAEVAAVRSQREAAELERHKLVLAHQSEAAATHVRVSTLEAEKKAVQRRCGEAEETAARRHRQAEEVRDRLQDALEEVSRFREACTGKDRVALEVRDEA 1332
            R   V +SL  +N+ LK NYD I+ EL+  R+K++  RKQLLEAVE ++E D+ TE +V KW+VQLE RT+ELESL+++LVPQDLDMLR ++QEE+E P +RR+A +EAE E+HR      QM+   RR+ ERC+AEYEQ TID  RE E V  QHKSE   L+MR+ +LEA+ AD                   A + L  E++AVR+ +E  E+ERH+LVLAHQ E AA     + L+AEK A+ RRC E  ETA                     +R R A   K+R A E R +A
Sbjct:   25 RALGVCQSLREENETLKVNYDTIKGELLRTRDKYSAQRKQLLEAVEAKIEGDRTTEAVVHKWRVQLEARTKELESLRSQLVPQDLDMLRMQMQEEIEGPHKRRLAAVEAEAEKHRRVQRQLQMFFNVRRDLERCRAEYEQSTIDHTREAETVAAQHKSEVAALRMRLAELEATAADXXXXXXXXXXXXXXXXXXXADAHLRQELSAVRADKEKLEVERHRLVLAHQGEVAAARAAAAALDAEKAALARRCEELVETAQXXXXXXXXXXXXXXXXXXXXARLRGAVAAKERAANEARADA 323
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1519.3873.1 vs. uniprot
Match: A0A8J2SAS7_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SAS7_9STRA)

HSP 1 Score: 124 bits (312), Expect = 6.330e-26
Identity = 80/163 (49.08%), Postives = 107/163 (65.64%), Query Frame = 1 
Query:  475 SLGSQNDKLKSNYDAIRTELIHLREKHNNTRKQLLEAVENRVEADQRTETLVAKWKVQLEGRTRELESLQAKLVPQDLDMLRAKVQEELEVPQQRRVALLEAEVERHRQMYCKARREHERCKAEYEQYTIDQGREMEAVHQQHKSESHVLKMRVQDLEASFAD 963
            SL  QN  L+ ++D  R E++  REK    R +L+E  + ++EAD+ TE LVAKWKVQL+ RTRELE +Q KLVPQDLDMLR ++QEELEVP Q++++ LEAE    +QM+   RRE ER K E+  YT  Q     +    H +E   L+ RV +LEA+ AD
Sbjct:   44 SLREQNAILQRDHDKAREEVLRQREKVAANRTELVEQAKAKIEADRATEALVAKWKVQLDSRTRELEEVQKKLVPQDLDMLRIQIQEELEVPHQQKISDLEAEARSFQQMFFNVRRELERSKTEFAAYTEHQEAARASDRATHDAEHRGLRRRVVELEAAAAD 206
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1519.3873.1 vs. uniprot
Match: H3HCN6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCN6_PHYRM)

HSP 1 Score: 111 bits (278), Expect = 5.900e-22
Identity = 81/184 (44.02%), Postives = 118/184 (64.13%), Query Frame = 1 
Query:  574 LLEAVENRVEADQRTETLVAKWKVQLEGRTRELESLQAKLVP-QDLDMLRAKVQEELEVPQQRRVALLEAEVERHRQMYCKARREHERCKAEYEQYTIDQGREMEAVHQQHKSESHVLKMRVQDLEASFADADRDQEGRLLRRQLEEAEAAKSQLHAEVAAVRSQREAAELERHKLV-LAHQSE 1119
            L++  E ++E+D++ E L+AKWK QLE + R  ESLQ K  P +DL+ LR K+QEELE P Q+R+  L+ EVERHRQM  + RRE E  K EYEQ++IDQG EME +H+ ++   + L+ ++Q  E   A+A   +E R L +Q E A+     L  EV  VR + +  +  ++KL+ LA +SE
Sbjct:    5 LMQETEQKIESDRKHEELIAKWKKQLEVKARAFESLQKKFAPPRDLEQLRIKIQEELEGPYQQRIDHLQDEVERHRQMSFEMRREFEALKTEYEQFSIDQGNEMECIHETYEITMNDLRRKLQLAEQMAANAQHAEEIRRLEQQREVAQIEIKSLRDEVKDVREELQRWDHTQNKLLELASESE 188
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1519.3873.1 vs. uniprot
Match: A0A7S4DKB8_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DKB8_HETAK)

HSP 1 Score: 104 bits (260), Expect = 2.210e-21
Identity = 65/160 (40.62%), Postives = 101/160 (63.12%), Query Frame = 1 
Query:  466 VDKSLGSQNDKLKSNYDAIRTELIHLREKHNNTRKQLLEAVENRVEADQRTETLVAKWKVQLEGRTRELESLQAKLVPQDLDMLRAKVQEELEVPQQRRVALLEAEVERHRQMYCKARREHERCKAEYEQYTIDQGREMEAVHQQHKSESHVLKMRVQDL 945
            V ++L S N+ LK NY+A+R E+I +REK+   RKQ  +A E ++ A++     +A W+ +L  +  E E LQ KL PQD++ LR  ++EELE   + +  + E EVE+ RQM+   RRE+E+ K EY Q+T D  +EME +H Q K+E+  L+  ++ L
Sbjct:   37 VCQNLKSDNEILKKNYEAVRGEIIGVREKYQKARKQAAQATEAKLLAERDVFEQIANWENKLHRKVLEYEELQKKLAPQDINALRVDIKEELEKEFETKQRITEDEVEKWRQMFYNVRREYEKIKTEYGQFTADSSKEMELLHDQAKAEAAALRGEIEAL 196
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1519.3873.1 vs. uniprot
Match: A0A813AST6_9DINO (CEP83 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AST6_9DINO)

HSP 1 Score: 107 bits (267), Expect = 7.850e-21
Identity = 81/216 (37.50%), Postives = 127/216 (58.80%), Query Frame = 1 
Query:  454 RRADVDKSLGSQNDKLKSNYDAIRTELIHLREKHNNTRKQLLEAVENRVEADQRTETLVAKWKVQLEGRTRELESLQAKLVP-QDLDMLRAKVQEELEVPQQRRVALLEAEVERHRQMYCKARREHERCKAEYEQYTIDQGREMEAVHQQHKSESHVLKMRVQDLEASFADADRDQEGRLLRRQLEEAEAA-------KSQLHAEVAAVRSQREAA 1077
            R   V +SL ++ND L++ Y+ ++ EL  ++ KH+  R+Q ++  E  +E +Q+ E LV++WK Q         ++Q ++ P +DLD+LR ++QEELEVP Q+RVA LEA +E+HR +Y  ++RE E  KAE+EQ + D   + EA    H ++   LK R+ DLE        D +GR     L  A+AA       +++L AE   +R QR+AA
Sbjct:   41 RTLSVAQSLRTENDSLRAGYEKVKQELTRMKGKHDAVRQQYMDEAE--LELEQKHEELVSEWKQQXXXXXXXFLAMQEQMAPPRDLDVLRVRIQEELEVPHQKRVAELEAAIEKHRALYFTSKREAELLKAEFEQSSADHAADAEATAAAHTAQVKTLKRRIADLEERL-----DGDGRTAADALRAAQAAADDAAVARARLAAEATEMREQRDAA 249
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1519.3873.1 vs. uniprot
Match: G4YQA8_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YQA8_PHYSP)

HSP 1 Score: 108 bits (269), Expect = 1.300e-20
Identity = 100/304 (32.89%), Postives = 159/304 (52.30%), Query Frame = 1 
Query:  580 EAVENRVEADQRTETLVAKWKVQLEGRTRELESLQAKLVP-QDLDMLRAKVQEELEVPQQRRVALLEAEVERHRQMYCKARREHERCKAEYEQYTIDQGREMEAVHQQHKSESHVLKMRVQDLEASFADADRDQEGRLLRRQLEEAEAAKSQLHAEVAAVRSQREAAELERHKLVLAHQSEAAATHVRVSTLEAEKKAVQRRCGEAEETAARRHRQAEEVRDRLQDALEEVSRFREACTGKDRV--------ALEVRDEARHAAERLALEWGREKAELKAANEGLIKRIALVERRSREASDQAA 1464
            E  + ++E+D++ E L+AKWK QLE + R  ESLQ K  P +DL+ LR K+QEELE P Q+R+  L+ EVERHRQM    RRE E  K EYEQ++IDQG EME +H+ ++   + L+ +++  E S A++++ +E R L +Q E A+     L  EV            +      AH+   A    R +TLE + KA  R+   A++       + +  +++L +   E    RE    K+ +        ++++RDE           W RE++ LK     L+ ++   E  +++ S  AA
Sbjct:    8 ETEQKKIESDKKHEELIAKWKKQLEVKARAFESLQKKFAPPRDLEQLRIKIQEELEGPYQQRIDNLQDEVERHRQMSFDMRREFEALKTEYEQFSIDQGNEMECIHETYEVTLNDLRRKLRLAEESAANSNQTEEIRRLEQQREAAQIELKALREEVRDXXXXXXRVSEQSEDDKSAHELRLADDATRNATLELDLKACNRQLTRAKDECESIRSKWDHAQNKLLELASESEGIREQLKQKEALIFSSHNSLSMKLRDER--------ATWEREQSNLKERVSELVLKLQAAEAAAQKNSTAAA 303
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1519.3873.1 vs. uniprot
Match: A0A421GUZ4_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GUZ4_9STRA)

HSP 1 Score: 105 bits (261), Expect = 3.350e-20
Identity = 67/173 (38.73%), Postives = 108/173 (62.43%), Query Frame = 1 
Query:  439 NLPRNRRADVDKSLGSQNDKLKSNYDAIRTELIHLREKHNNTRKQLLEAVENRVEADQRTETLVAKWKVQLEGRTRELESLQAKLVP-QDLDMLRAKVQEELEVPQQRRVALLEAEVERHRQMYCKARREHERCKAEYEQYTIDQGREMEAVHQQHKSESHVLKMRVQDLEAS 954
            N    + A + ++L  + D  + +   +++E+  L E+ +  +  L++  E +++AD++ E L+ KWK QLE + R  E+LQ K  P +DL+ LR K+QEELE P Q+R+  L+ EVE+HRQM    RRE E  KAEYEQ++IDQG EME + + +    + L +++Q  EA+
Sbjct:   34 NTDLQKTAALSQTLQRERDDTQQHNVKLKSEVKRLNERCDKLQLVLMQETEQKIDADRKHEELIGKWKKQLEVKARAFETLQKKFAPPRDLEQLRIKIQEELEGPYQQRIESLQDEVEQHRQMSFDIRREFEALKAEYEQFSIDQGNEMECIQETYDDRINELALKLQAAEAA 206
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1519.3873.1 vs. uniprot
Match: A0A6A3ZHS8_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ZHS8_9STRA)

HSP 1 Score: 107 bits (266), Expect = 3.730e-20
Identity = 69/149 (46.31%), Postives = 98/149 (65.77%), Query Frame = 1 
Query:  574 LLEAVENRVEADQRTETLVAKWKVQLEGRTRELESLQAKLVP-QDLDMLRAKVQEELEVPQQRRVALLEAEVERHRQMYCKARREHERCKAEYEQYTIDQGREMEAVHQQHKSESHVLKMRVQDLEASFADADRDQEGRLLRRQLEEAE 1017
            L++  E ++E+D++ E L+AKWK QLE + R  ESLQ K  P +DL+ LR K+QEELE P Q+R+  L+ EVE+HRQM    RRE E  K EYEQ++IDQG EME +H+ ++   + L+  +Q  E S A +   +E R L +Q E A+
Sbjct:   84 LMQETEQKIESDRKHEELIAKWKKQLEVKARAFESLQKKFAPPRDLEQLRIKIQEELEGPYQQRIENLQDEVEQHRQMSFDMRREFEALKTEYEQFSIDQGNEMECIHETYEVTLNDLRRNLQLAEESAAHSQHTEELRRLEQQREAAQ 232
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1519.3873.1 vs. uniprot
Match: A0A2D4BVY0_PYTIN (GBBH-like_N domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BVY0_PYTIN)

HSP 1 Score: 107 bits (266), Expect = 5.120e-20
Identity = 72/199 (36.18%), Postives = 118/199 (59.30%), Query Frame = 1 
Query:  454 RRADVDKSLGSQNDKLKSNYDAIRTELIHLREKHNNTRKQLLEAVENRVEADQRTETLVAKWKVQLEGRTRELESLQAKLVP-QDLDMLRAKVQEELEVPQQRRVALLEAEVERHRQMYCKARREHERCKAEYEQYTIDQGREMEAVHQQHKSESHVLKMRVQDLEASFADADRDQEGRLLRRQLEEAEAAKSQLHAEV 1047
            + A + + L  + D    N   ++ E+  L ++    +  L++  E ++E+D++ E L+AKWK QLE +TR  E LQ KL P +DL+ LR ++QE+LE P Q+R+A ++ E+++ R +  + RRE+E  KAEYEQY IDQG EME +H  ++S    L+ ++Q  E +  D+   +  R L  Q + A+     LH E+
Sbjct:  440 KTAALSQLLQRERDGFAHNNQKLKDEVKRLHDRCERLQNVLVQETEQKIESDRKHEELIAKWKKQLELKTRAFEVLQKKLAPPRDLEQLRIQIQEQLEEPHQQRLAAMQGEIDKQRAISFELRREYETIKAEYEQYAIDQGNEMECLHTTYESRITDLRKKLQSAEDAVRDSQHAETIRRLEHQRDAAQVEVKLLHQEI 638
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1519.3873.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPE6_ECTSI5.720e-24474.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YNG1_9STRA7.780e-5146.49Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J2SAS7_9STRA6.330e-2649.08Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
H3HCN6_PHYRM5.900e-2244.02Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A7S4DKB8_HETAK2.210e-2140.63Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A813AST6_9DINO7.850e-2137.50CEP83 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
G4YQA8_PHYSP1.300e-2032.89Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A421GUZ4_9STRA3.350e-2038.73Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A6A3ZHS8_9STRA3.730e-2046.31Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A2D4BVY0_PYTIN5.120e-2036.18GBBH-like_N domain-containing protein n=1 Tax=Pyth... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1519contigH-canaliculatus_F_contig1519:1523..10602 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score712.2
Seed ortholog evalue2.6e-202
Seed eggNOG ortholog2880.D7FPE6
EggNOG OGs28NMX@1,2QV7M@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons9
Model size2559
Cds size2313
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1519.3873.1prot_H-canaliculatus_F_contig1519.3873.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1519 1769..10602 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929259.389539-UTR-H-canaliculatus_F_contig1519:1522..17681622929259.389539-UTR-H-canaliculatus_F_contig1519:1522..1768Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1519 1523..1768 +
1696845739.842344-UTR-H-canaliculatus_F_contig1519:1522..17681696845739.842344-UTR-H-canaliculatus_F_contig1519:1522..1768Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1519 1523..1768 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929259.398782-CDS-H-canaliculatus_F_contig1519:1768..22411622929259.398782-CDS-H-canaliculatus_F_contig1519:1768..2241Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1519 1769..2241 +
1696845739.85461-CDS-H-canaliculatus_F_contig1519:1768..22411696845739.85461-CDS-H-canaliculatus_F_contig1519:1768..2241Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1519 1769..2241 +
1622929259.4099295-CDS-H-canaliculatus_F_contig1519:2826..29471622929259.4099295-CDS-H-canaliculatus_F_contig1519:2826..2947Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1519 2827..2947 +
1696845739.8676164-CDS-H-canaliculatus_F_contig1519:2826..29471696845739.8676164-CDS-H-canaliculatus_F_contig1519:2826..2947Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1519 2827..2947 +
1622929259.4222028-CDS-H-canaliculatus_F_contig1519:4544..46851622929259.4222028-CDS-H-canaliculatus_F_contig1519:4544..4685Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1519 4545..4685 +
1696845739.8850331-CDS-H-canaliculatus_F_contig1519:4544..46851696845739.8850331-CDS-H-canaliculatus_F_contig1519:4544..4685Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1519 4545..4685 +
1622929259.432876-CDS-H-canaliculatus_F_contig1519:5429..55881622929259.432876-CDS-H-canaliculatus_F_contig1519:5429..5588Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1519 5430..5588 +
1696845739.9005532-CDS-H-canaliculatus_F_contig1519:5429..55881696845739.9005532-CDS-H-canaliculatus_F_contig1519:5429..5588Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1519 5430..5588 +
1622929259.4440043-CDS-H-canaliculatus_F_contig1519:5897..61761622929259.4440043-CDS-H-canaliculatus_F_contig1519:5897..6176Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1519 5898..6176 +
1696845739.9096773-CDS-H-canaliculatus_F_contig1519:5897..61761696845739.9096773-CDS-H-canaliculatus_F_contig1519:5897..6176Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1519 5898..6176 +
1622929259.4561274-CDS-H-canaliculatus_F_contig1519:7043..72581622929259.4561274-CDS-H-canaliculatus_F_contig1519:7043..7258Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1519 7044..7258 +
1696845739.9194422-CDS-H-canaliculatus_F_contig1519:7043..72581696845739.9194422-CDS-H-canaliculatus_F_contig1519:7043..7258Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1519 7044..7258 +
1622929259.4916341-CDS-H-canaliculatus_F_contig1519:8040..83291622929259.4916341-CDS-H-canaliculatus_F_contig1519:8040..8329Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1519 8041..8329 +
1696845739.9287949-CDS-H-canaliculatus_F_contig1519:8040..83291696845739.9287949-CDS-H-canaliculatus_F_contig1519:8040..8329Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1519 8041..8329 +
1622929259.506414-CDS-H-canaliculatus_F_contig1519:8910..92881622929259.506414-CDS-H-canaliculatus_F_contig1519:8910..9288Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1519 8911..9288 +
1696845739.940149-CDS-H-canaliculatus_F_contig1519:8910..92881696845739.940149-CDS-H-canaliculatus_F_contig1519:8910..9288Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1519 8911..9288 +
1622929259.5245194-CDS-H-canaliculatus_F_contig1519:10344..106021622929259.5245194-CDS-H-canaliculatus_F_contig1519:10344..10602Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1519 10345..10602 +
1696845739.9503436-CDS-H-canaliculatus_F_contig1519:10344..106021696845739.9503436-CDS-H-canaliculatus_F_contig1519:10344..10602Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1519 10345..10602 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1519.3873.1

>prot_H-canaliculatus_F_contig1519.3873.1 ID=prot_H-canaliculatus_F_contig1519.3873.1|Name=mRNA_H-canaliculatus_F_contig1519.3873.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=771bp
MSQRKGAEKSNNHPSGCHRDRIAPVCTSYLPSAHALQRPDVDSLVSIPFP
LEPGRSPHPPLSSSNLPRNRRADVDKSLGSQNDKLKSNYDAIRTELIHLR
EKHNNTRKQLLEAVENRVEADQRTETLVAKWKVQLEGRTRELESLQAKLV
PQDLDMLRAKVQEELEVPQQRRVALLEAEVERHRQMYCKARREHERCKAE
YEQYTIDQGREMEAVHQQHKSESHVLKMRVQDLEASFADADRDQEGRLLR
RQLEEAEAAKSQLHAEVAAVRSQREAAELERHKLVLAHQSEAAATHVRVS
TLEAEKKAVQRRCGEAEETAARRHRQAEEVRDRLQDALEEVSRFREACTG
KDRVALEVRDEARHAAERLALEWGREKAELKAANEGLIKRIALVERRSRE
ASDQAASRFRVAQQLEERVRHDAQKEAAALRGGLSRLEAEVERLRLEGER
TGSACHQDTQRLRGEADRARSEASRVLREKEALRERVAALQSAADRAVEA
AEAASRDRDETRVAAATMAQRAQQEREGLAEMEGENEGLRVRLQMAEEEL
RSLVAEADQAREAHVRALKDIRRTAGAERDSHVARVRYELETLRRRARRS
VRKERKRSRAYKAQAIEAHQRGQRTRHLLQSRATALAAAAATAGGSGGAA
MGARWRGLGQPGVGHGGGAGGGRIGMDSTSSTFGAVFDGLPSDAAKTMEP
LELTQALRRVRSSRRRRAQGEKRDGGPCRTRANNNGGVADEGLSRPSSVG
DGEGEEGGLEPRGRGGCEESG
back to top

mRNA from alignment at H-canaliculatus_F_contig1519:1523..10602+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1519.3873.1 ID=mRNA_H-canaliculatus_F_contig1519.3873.1|Name=mRNA_H-canaliculatus_F_contig1519.3873.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=9080bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1519:1523..10602+ (Hapterophycus canaliculatus Oshoro5f female)
GAGAAACACCCGCTATTGCGAGGCTATGCGGTTGTTCAGATTTACACCGG
TGTTGGGGTGTCGGACCATTTTTTTGGTGATGTTCGCTCGGTGTAAGACC
ACAAGATGGACGATCGGATGGAAATGCAAGCTTTTTCGCGCTTCCCCGTT
CACGCCACGCTCGTCTTCCGTGCAGACGAAAACGCCATCCAGACTCACAA
GTGACAACTTGCTCACGTTGTTGTCTATGCGCGCAAGAGGGCGCACATGT
CACAGAGGAAAGGTGCTGAAAAGTCCAACAACCATCCAAGCGGCTGTCAC
AGAGACCGCATCGCACCTGTGTGCACCTCATACCTTCCAAGCGCGCACGC
CTTGCAGCGTCCAGACGTTGATTCTCTCGTCTCCATCCCATTCCCCCTGG
AGCCCGGCCGCTCACCCCACCCTCCCCTGTCTTCCTCCAACCTACCCCGA
AACCGTCGCGCCGACGTCGACAAGTCCTTGGGCAGCCAAAACGACAAGCT
CAAGTCCAACTACGACGCCATCCGGACGGAGCTCATTCACCTGCGCGAGA
AGCACAACAACACACGGAAGCAGCTCCTGGAGGCCGTCGAGAACCGGGTG
GAAGCCGACCAGCGAACCGAGACTCTCGTGGCGAAGTGGAAGGTCCAGCT
CGAGGGCAGGACGAGAGAGCTGGAGTCTCTACAGGCCAAGCTCGTACCTC
AAGACTTGGACATGCTCAGGTTTTCAGATTTTTTGTCTGGGCAGAGTTTG
AGGTGTTGCTCGCTTGGTTTGGTCTCTTCGTGCCGGATTGCCGAGGGGGC
ATACGGAACGCGAGGTGGTGCCGCGTGGTGTTTGGACTACCTCGTCTCTT
TGTGCTATGAGAAGGGGCGGGTGAGTGCTTTTTATCTTATACCTCGCGTC
GACCGTGAGATAACGTGGGCCTTGATCTAAACAGGGCCGGGACGGAGTAG
GTCGGAAATTGTTTTTGTCCACGAGGCGGGCATGAGTTATTATCGTCTAC
CTCACAAATTATCGGCGCTTGAAAAACGTGCTTTACAGCAATGAAACAAT
GGAAACGATACTACAGCAGTGCGATTGAAAGCGATCAATCCCCGGGGCGG
AAGCGCGGGTTTGAACGTCTTTCAGGCAGGGTCGCCATTGTCATTCAGTA
AGAACGGGGTGCTTGACGTCCTGAGCCGTGAAAGAAAGGAAATCCTCACC
ATCACTTTCTGTGCACAGGCGAACGAACCATCGACCCCAGTCGACTGTCC
GATCCTCGATATTTCTCGACCGTATCGTCTCGCAAAATGAAAAATAAAAC
CAAGGGCTAAGGTGCAGGAGGAGCTCGAGGTTCCGCAGCAGCGCCGTGTG
GCGTTACTCGAGGCGGAGGTGGAAAGGCACCGCCAGATGTACTGCAAGGC
TCGGCGCGAGCACGAGCGCTGCAAGGTGGGAAGACCGCCCCGTGCTGTGT
GTGTCGGCAAGCTCGTGCATTTTGAGCTTTCTTTTCCCTCCGACGCTTTT
GTCTCTGCGTTACAATAGCATTCCTCCGGGATGAGTGAGCGCACTCTATC
AGTCGATTCCCGAGTTGCTCATTGTTTTCGATACGGTGCCGAGGAGGTGG
TTCTGTCGCTTGTTTGCTTTTTTCGTTCGGTAAGAGAGCGACGATTCGCT
GTCCTCGTTTTCGAAAACAATCATCATCAAAGTTACGTTCAAGTGCGCGT
AGTACCCCAGGAGTGCAGTCGAACGTAGCTTCCTAGAAGCTGATTCCATC
AGGGGAAACAGGTCATGCCCTTGGCGATGGGGAAACGTATCTTGTGAGAG
CTACCAACCACCTTTTCCGCCAGGCGCGAGGGTGTAAGGTCGGAAGTCAA
TCGCGACAGCCGCTGCTTTTTCCAACCACTACATCTGTCTTGGTGGAACC
ATGTTGTCGAGTCTATGAGGGGGAGAACGTGCAAACGTGCAAAGAAAAGG
AAAGGTGTACCCCTGTGAGCACGGGTGGCGCATCAAGCGCCACTGCTACT
GGCCGCTGTTGGGCTATCCGAATAAAGCGGCACCACAAGGACTCGAGGCA
TGCCGGGCCAAAGCGAACTTATAAGCCCGCAGAAGGGACGGATAGTCATA
GATCAAGGCACGCCCCAGGCTCGCTAGTGGATGAAAGAGAGGAGTGCTCC
TCTGTCATCTGTTGGATTGAAGAGCTTGATTCTCGTGGCTATTCGAGGGG
CTGGACAGTGGAGAGACTAATGGTGTACTGAAATCTAGCGGCTAAGCGTA
TGGAGTGTTTGGGTGAAGGAGACAGAGGAGCTCTGCAAAGCTGCAGTGGC
AGCGACCACTACGCCAACCGATCGCTCCCCCCATCAGACGTGGACACGAT
GTTATGCCCGAAACGGCCCGCTGAGGTTGACCTCTCTCAAAGCACAAAAG
CTTGCCGCACAAGCCTCAGCGAGCGCCGATTTTGACGACAAGTCAAGCCC
TACACCCTCGTGTCACCCGGGGTTTCTAGTGCTCAAATTAAGGGACTGGT
CCAGTGGCGATGCCCTGCCCCGTGCGCAATTCTCCTCTGCCGCCAAGCAC
AAAAACAGAATCGTTTCTGGTTTGCGTGAGACCCGAGTGTCGAGGGGCGT
GTGGTGAAGAACGGTTTTGTTCGAGGCCACGCTCATCGCCTTCTCGTAAG
AGGTTCAGCCAGGGCGGCGCACCGTTCATGTTGCGAGGCGCCATGAGTGT
TAGAAATGAGTCAGGTGCTGATTCGTCGAGGGTGTTCTACGGTTTTGTCC
CGAAGGGCAGGGAAGCGGCTTCGTCCAGACTGTTCCAAGGTGCCTTGCCC
CACTGTCTGGATGGTCATGGTTCCGCCCTGTCCATGCTCTCGTCAATTTT
TTCCACGATTGCTACGTCGTTTGTGTGCCATGCCCGTGCCCGTGGCCGCG
TCCCACTCTCGCCGTTCGTGTGAGGAACTCGTTGTTCGCGCCGGATGCAA
ACACTGCTGTAAGTTCTGATTTATTTTTGGAGACGCTCGCTCAATGAAGA
AGACGTTCCGTCGCTGCAACAGGCGGAGTATGAGCAGTACACAATCGACC
AGGGTCGGGAGATGGAGGCCGTGCACCAGCAGCACAAGTCTGAGTCGCAC
GTCCTGAAGATGAGGGTGCAAGACCTCGAAGCCTCCTTCGCTGACGCTGA
CCGCGATCAGGAGGTGGGTTCGTTGACCGTGTTCCACATCTCTCACCTCC
TACAAGTACTGGGTTTCGATTTGCCTGCGTGCACAGTTTGCAGCTTGAGG
AGTGAAGTTAACGTGTACGGCGTATGATGCGCAGACATGAATCGATCTCG
TTTTGACGACCAATCGTGACCGAGACAGGAGTGGAAGGTGCGAGTACGTA
CGGCGCTGGCCGCAGCCATGTCTGAACATCCCTGGTGGACGCCGACTGAG
GCCAAGGGATAAAGCACACACAAGCGCGCACGCACACACACACGCTCAAA
CACACACGCACACAGCAGTGAATCGCCACCTCGTTGTCAACACGATCGAA
AACCGGCTTGAGAAATCGGGAGTGTGTCCCGAACAACGGCGGAAAGTATC
TCGACCCGTGAGCTCGACGGAATGGAAGCACGTCTCACCTGGTAAGGCTA
GTATTCCCACCTACATCGTCTATTCCCTCGTGCACGACAGCCGTGGATGA
ATCATGGATGCCGGTCGTTGTTCCCTTCCCGGGCCTTGTTCCGATTGGTA
CAGCACGAGGGCATGTTTTGGTCGGTGGCAGTTTCAGAAACAACGCTTGT
TGCTGCCGTGATGTCCCCCCCTTCCGACGTGACAAGATGGACAGGGCGTT
GTGCGTGACACGACAGGCCGTTCCGACACCAGCTTTGTCCAACCAACCAA
AGCCCTGTTTCCTGGTTCCTGCCCTGCTTCTGCTCCGTACCCTCCTGCTG
GCGGTAGGGGCGTCTCCTGCGGCGGCAGCTGGAGGAAGCCGAAGCCGCGA
AGTCGCAGCTACACGCCGAGGTGGCTGCCGTCCGGAGCCAGCGGGAAGCA
GCCGAGCTGGAGCGGCACAAGCTGGTCCTGGCTCACCAGAGCGAGGCGGC
GGCGACTCACGTGCGGGTAAGGCACGGGAGAGGGCGAGGGGGCACGACCA
GGAGGGAAAGCAGCGGGGGAGGGAGGGAGGGGGGCGACATAGAGACTGGG
GGACAGACAAAGAACAACGACGCGTGAAAATCACGTGGATATCGCCACCT
GCATCGAGCAGCGGGGACGATATCGATTCCGTTTTGTCGCATTTTCAACT
CTCCACCTCTTTCTTTTCGCGCTGCACGAAGCACCACATCACGACGCGAT
CTCAGACCGCTCGCAACCAATTCGGAGACGGCACCGATCAGGAGCAACCA
CTCCCGTCGACCCCCCGAACCATAGGTTTCCACTCTCGAGGCCGAGAAAA
AGGCCGTGCAGCGCCGGTGCGGGGAGGCGGAAGAGACGGCCGCCCGCCGC
CACCGCCAGGCGGAAGAGGTGCGCGACAGGCTGCAGGACGCCCTGGAAGA
GGTCTCCAGGTTCAGGGAGGCGTGCACGGGGAAAGACAGGGTGGCCCTCG
AGGTGCGAGACGAGGCGCGGCACGCGGCGGAGAGGCTGGCGCTGGAGTGG
GGCCGGGAGAAGGCGGAGCTGAAGGCGGCCAACGAGGGGCTGATTAAGCG
GATCGTGAGTTTGATGTTTTGAACGAGGGAGGGACGGAGGGACGGAGGGA
GGGGGGGTAAGAGAGGAGGAGACGTAGCGAACATGTCTCTGCTTGATGTG
CTGCTTTCGGTTTATGTTGTGTAAATATGTCGGTGGGGGGCGGGGGGAGG
CGTGCCATGCTCGTGGGACCGTGATCGTCAGACCATGGGCGTTGCATCCC
TCAAGACGTGAAAGAGAGAGAGAGACAGAGAGAGACAGAGAGAGAGACAG
AGAGACAGAGAGACAGAGAGACAGAGACAGAGAGACAGAGAGACAGAGAG
ACAGAGACAGAGAGACAGAGAGACAGAGAGACAGAGACAGAGACAGAGAC
AGAGACAGAGACAGAGACAGAGACAGAGACAGACCGCGTGGGGGGCTTTT
TGTTTTTTATTCTGTTCGCTTGCGTTCCCCTCAATCAAACGTCTTCAGAA
ATCCAATAGCGTGTGTCGCGCGCTTCCGACCGTCCTCGCGTTTGTTTATT
TACCACCCCGCGAATGCGAACGTGCGTCTCCGCTTGCCGCCAGATGTCTC
TCGTCCTCCTCTCTCTCCCTCCTTCTCTCATATCTTTCCCTCCTTCTCTC
CGCTCCCTCCCCCCCGACCTGCATATGACGTAAACATATGGTGTCTCGGT
TTGTCTCGCTCTATCTCACTCTGCTTGTGTCTCCATCTTTCTTTTCCCCT
TTCTCTCTCCCTCTCCGACTCTCCCTCTCTGGCTCTCCGTCTCTACCTTG
TCACGTACCTGCCTGCCACACGCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCACACACACACACACACACACACACACACACACGAACACACACACG
CGCGCACACACATACACCCAGGCGCTGGTGGAACGGCGTTCTCGCGAGGC
GTCCGACCAAGCCGCCAGCCGTTTCCGGGTCGCGCAGCAGCTGGAGGAGA
GGGTGAGGCACGACGCGCAGAAGGAGGCGGCCGCTCTGCGGGGAGGGTTG
TCGCGTCTCGAGGCGGAGGTGGAGAGGTTACGCCTGGAGGGAGAGAGGAC
CGGGTCGGCCTGCCACCAGGACACCCAGAGGCTACGGTAAGGCCTGCAGC
TGGTGATTCGCGCGTGCTGTGCGGTTTCGCGGCTGTTGCGCTTGCTGCGT
GTACCGTGCGTGTCTGTTTTATGTGCGTGTGTGTGTGTGTGTGTGTGTGT
ATGTGTATGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGCTCACCTACTCAGTG
ATCTTTCGAAAGGGAGAGCAGGGCGGGGGGTGGAGGGTAAGGTGGGTCGA
GCTAGGCTTGCGCGGTTGACAGCTGGTGGTGTTGTCGCTGAAGCTACGGT
TGTTGCTGCTTTGGCCGTCGTTGCTGGATGGACGTGTCATTTTGCGTGGT
TCTGGCGATGTTTGCTGCATGACTTATTTTTCTCATTGTCTCGCTGACTC
TACTTGTCGCAAGCTTGCCCCTGTAATTGCTCTTGATCTCTAAGCTAGAA
GTGGCTTTGTGCGGGAGAGGGGGATGGAACGGATCCGGCACTCTGTCTCA
CGCGGCATACTTTCCACCAGCACGATTTGCGACTCAGGGGAGTTGTTCAG
AACAACAGAGCAGGACGATTTCACCGTTTTTCCTTCTTCACCCACACCCC
CTGCCCCGCCATCTTCCTCCACCCCTTCACGCACACACCCCACCGCTCTC
GCATCCGGGCAACCTATCTGAAGGCGTCGCCAAGCTCCACCAATCCCCCC
CCACCCACCACCGCCGCTGCTCTTGCCGCCGCTTCTGTTTGATCGAACGA
AAAACCAATCCACCACAGTGGAGAGGCGGACCGCGCGAGGTCCGAGGCGT
CTCGGGTTCTCCGCGAGAAGGAGGCATTGCGGGAGCGGGTGGCGGCACTC
CAATCCGCCGCGGATCGGGCGGTGGAAGCGGCGGAAGCGGCGAGCCGCGA
TCGTGACGAGACGAGGGTGGCGGCGGCGACGATGGCGCAGCGGGCGCAGC
AGGAACGGGAAGGGTTGGCAGAGATGGAGGGGGAGAACGAGGGCCTCCGA
GTGAGGCTGCAGATGGCGGAGGAGGAGCTACGGAGCCTCGTCGCTGAAGC
TGATCAGGTACAGGAGTGGCGAGGTGGTGTGATCTTCAAGGTCGGGTTTG
ATGGGGTACGGGTACGTTGGGTAAGGGTACAGGTGCTGTAGAAAACCTAC
CCAGACTTTCGCTAAGGGTATGAGGGTAGTATCAAATCTACCCAGTTTGC
CCGGGTAGATGGACGTGTGGGTAAAGTAGTCTGGGTAGGGATACGAGAGT
CGTATCAAGCCTACCCAAGACTCTGGGTAGGGGTACGAGAGTAGTATATG
ACCTAACCAGACTTTGGCTTTGCGACATGAGAAGCTGTCCATTGGCTGCG
GATGCGCCCCCACCTAACTCGCTAGTCTTTCCGGGTCACCCGCGACTCTT
TGACCCAAATGTATACAGCAGCATAGGTAACGAGATTGCTTGATATTCAA
CTTCAAGTAAAAACATACGCAGAGAAAGAAAGATGAGCAGAAGGGAACCC
TGATCGCGTACAACATCTTGAGACGTCTGTCTGCGACCGGTAGGAAGACC
GCCCCCAACGGCAATGGCGCCACCGCGACCACCAACGATGCAACAACCAC
CACCAACTCCATCCCCATCCCCACCTGACGAAAAACAGGCCCGGGAGGCT
CACGTCCGCGCCCTTAAGGACATACGGCGCACCGCCGGCGCCGAGCGGGA
CTCGCACGTGGCCCGCGTCCGGTACGAGCTGGAGACCCTCCGACGGCGAG
CCCGGCGGTCCGTCCGCAAGGAGAGAAAACGGAGCCGCGCGTACAAGGCT
CAGGCAATCGAGGCGCACCAACGGGGGCAGAGGACGAGGCACCTGCTCCA
GTCTCGCGCGACGGCGTTGGCGGCGGCTGCGGCTACGGCGGGGGGAAGCG
GGGGAGCGGCGATGGGGGCGCGGTGGAGGGGGCTTGGCCAGCCGGGGGTG
GGGCATGGAGGAGGAGCGGGAGGAGGGAGGATAGGGATGGACTCTACATC
ATCCACGTTTGGCGCGGTAGGGTTTACCGTCCGCACCTTGCTCAGGGATA
GAGTTGGGGGCGGCGGAGAAGGGCTTGGCTATTGGCGTGTGCACATAACG
TCATTCCTACGTAAAAGATATGCTGGATTGCATTTGGTCAGTCTCTAAGC
ACCTGACAATCAGAAGCGAAGGTTCATGGTACACGCCCAGTACCAAGAGA
GCGGATCGAGGTTATTATCGGTAAGAAGGTCGTGCAGTCGCACTAAAGGT
TGGATTGTGTGTCCTCTATCTTGATCGGTATCGGCACGAACCCCTTCCTT
CCTTCCTTCCTTCCGAAATGCCGGGTGGACGGCTCACCATCTTCGGTGGT
TGCCCCCACTTGGTTACTTTCCCGCGGCTTCCTGTCCTTGTCACACCTAG
CGCCGCTTCAAAATGATCTCGGGTTCGGCTATATCATTTCATGCAAGCGT
ACGAGGTAGCTCTTTTGAGCTCCTCTGCACATTGTCGAGGCGCAGCCGCC
ACTTCAGCACACGTGTAGGTGTCAAGCCAACAGAGGGGCACAGCGACGTA
GTATTCGCGGTCATCGGGTAGGGCCCCGGGTCGGAAAGAGCATCCTGAAC
CGCGCACTCCCTGTGTAGGTACTTTTCGCACTTTTCTGGTCGTCAATTCT
GGCGAATGCGAGGCTGTAGTTGCCGATGTCGCATCTGTCACTGGTGAGGC
TTGGTCAGGCGCGCTCTCGGAAACGAGACCGCCCCATCGGCTTTTCAGCA
AGGAGCAACGATCGTGGCGGAGATGCCTACATGACTGCTTGCTTTTTCAG
CGGCATGTCAGAGCGAGCTTACATCACGGGACTGCAAGGGTTGTCGTTGC
CTGCAGCATGTCGTTGCTTGCACACGTGGCGTCATTGATGCTGGTGGTGC
AGCTGTCGTTGCAGTTGCGATTGCTTTATCGCTGCCCCCCAGCGAACGCC
GTCGTGACCTGCCTCACAGAGAACACCCTGTGAAGTCTTGCTGCCCCGCC
CTAACCAGAATCGTTCTGCAGCACGTTCCTGATTCTGCTTGCTATCCACG
CTCTGTTCGGTTTGCTGTCCAGGTTTTCGACGGTTTGCCAAGCGATGCGG
CCAAGACAATGGAACCGCTGGAGCTCACCCAAGCCCTACGGAGGGTGCGC
TCCTCGCGCCGGAGACGAGCCCAAGGCGAGAAACGCGACGGTGGCCCCTG
CAGGACTCGCGCCAATAACAACGGTGGCGTCGCGGACGAAGGGCTGTCCC
GGCCTTCGTCCGTGGGGGACGGAGAGGGGGAGGAAGGAGGGCTGGAACCG
CGTGGGCGAGGTGGGTGCGAGGAGTCGGGG
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1519:1523..10602+

>mRNA_H-canaliculatus_F_contig1519.3873.1 ID=mRNA_H-canaliculatus_F_contig1519.3873.1|Name=mRNA_H-canaliculatus_F_contig1519.3873.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=4626bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1519:1523..10602+ (Hapterophycus canaliculatus Oshoro5f female)
ATGTCACAGAGGAAAGGTGCTGAAAAGTCCAACAACCATCCAAGCGGCTG
TCACAGAGACCGCATCGCACCTGTGTGCACCTCATACCTTCCAAGCGCGC
ACGCCTTGCAGCGTCCAGACGTTGATTCTCTCGTCTCCATCCCATTCCCC
CTGGAGCCCGGCCGCTCACCCCACCCTCCCCTGTCTTCCTCCAACCTACC
CCGAAACCGTCGCGCCGACGTCGACAAGTCCTTGGGCAGCCAAAACGACA
AGCTCAAGTCCAACTACGACGCCATCCGGACGGAGCTCATTCACCTGCGC
GAGAAGCACAACAACACACGGAAGCAGCTCCTGGAGGCCGTCGAGAACCG
GGTGGAAGCCGACCAGCGAACCGAGACTCTCGTGGCGAAGTGGAAGGTCC
AGCTCGAGGGCAGGACGAGAGAGCTGGAGTCTCTACAGGCCAAGCTCGTA
CCTCAAGACTTGGACATGCTCAGATGTCACAGAGGAAAGGTGCTGAAAAG
TCCAACAACCATCCAAGCGGCTGTCACAGAGACCGCATCGCACCTGTGTG
CACCTCATACCTTCCAAGCGCGCACGCCTTGCAGCGTCCAGACGTTGATT
CTCTCGTCTCCATCCCATTCCCCCTGGAGCCCGGCCGCTCACCCCACCCT
CCCCTGTCTTCCTCCAACCTACCCCGAAACCGTCGCGCCGACGTCGACAA
GTCCTTGGGCAGCCAAAACGACAAGCTCAAGTCCAACTACGACGCCATCC
GGACGGAGCTCATTCACCTGCGCGAGAAGCACAACAACACACGGAAGCAG
CTCCTGGAGGCCGTCGAGAACCGGGTGGAAGCCGACCAGCGAACCGAGAC
TCTCGTGGCGAAGTGGAAGGTCCAGCTCGAGGGCAGGACGAGAGAGCTGG
AGTCTCTACAGGCCAAGCTCGTACCTCAAGACTTGGACATGCTCAGGGCT
AAGGTGCAGGAGGAGCTCGAGGTTCCGCAGCAGCGCCGTGTGGCGTTACT
CGAGGCGGAGGTGGAAAGGCACCGCCAGATGTACTGCAAGGCTCGGCGCG
AGCACGAGCGCTGCAAGGGCTAAGGTGCAGGAGGAGCTCGAGGTTCCGCA
GCAGCGCCGTGTGGCGTTACTCGAGGCGGAGGTGGAAAGGCACCGCCAGA
TGTACTGCAAGGCTCGGCGCGAGCACGAGCGCTGCAAGGCGGAGTATGAG
CAGTACACAATCGACCAGGGTCGGGAGATGGAGGCCGTGCACCAGCAGCA
CAAGTCTGAGTCGCACGTCCTGAAGATGAGGGTGCAAGACCTCGAAGCCT
CCTTCGCTGACGCTGACCGCGATCAGGAGGCGGAGTATGAGCAGTACACA
ATCGACCAGGGTCGGGAGATGGAGGCCGTGCACCAGCAGCACAAGTCTGA
GTCGCACGTCCTGAAGATGAGGGTGCAAGACCTCGAAGCCTCCTTCGCTG
ACGCTGACCGCGATCAGGAGGGGCGTCTCCTGCGGCGGCAGCTGGAGGAA
GCCGAAGCCGCGAAGTCGCAGCTACACGCCGAGGTGGCTGCCGTCCGGAG
CCAGCGGGAAGCAGCCGAGCTGGAGCGGCACAAGCTGGTCCTGGCTCACC
AGAGCGAGGCGGCGGCGACTCACGTGCGGGGGCGTCTCCTGCGGCGGCAG
CTGGAGGAAGCCGAAGCCGCGAAGTCGCAGCTACACGCCGAGGTGGCTGC
CGTCCGGAGCCAGCGGGAAGCAGCCGAGCTGGAGCGGCACAAGCTGGTCC
TGGCTCACCAGAGCGAGGCGGCGGCGACTCACGTGCGGGTTTCCACTCTC
GAGGCCGAGAAAAAGGCCGTGCAGCGCCGGTGCGGGGAGGCGGAAGAGAC
GGCCGCCCGCCGCCACCGCCAGGCGGAAGAGGTGCGCGACAGGCTGCAGG
ACGCCCTGGAAGAGGTCTCCAGGTTCAGGGAGGCGTGCACGGGGAAAGAC
AGGGTGGCCCTCGAGGTGCGAGACGAGGCGCGGCACGCGGCGGAGAGGCT
GGCGCTGGAGTGGGGCCGGGAGAAGGCGGAGCTGAAGGCGGCCAACGAGG
GGCTGATTAAGCGGATCGTTTCCACTCTCGAGGCCGAGAAAAAGGCCGTG
CAGCGCCGGTGCGGGGAGGCGGAAGAGACGGCCGCCCGCCGCCACCGCCA
GGCGGAAGAGGTGCGCGACAGGCTGCAGGACGCCCTGGAAGAGGTCTCCA
GGTTCAGGGAGGCGTGCACGGGGAAAGACAGGGTGGCCCTCGAGGTGCGA
GACGAGGCGCGGCACGCGGCGGAGAGGCTGGCGCTGGAGTGGGGCCGGGA
GAAGGCGGAGCTGAAGGCGGCCAACGAGGGGCTGATTAAGCGGATCGCGC
TGGTGGAACGGCGTTCTCGCGAGGCGTCCGACCAAGCCGCCAGCCGTTTC
CGGGTCGCGCAGCAGCTGGAGGAGAGGGTGAGGCACGACGCGCAGAAGGA
GGCGGCCGCTCTGCGGGGAGGGTTGTCGCGTCTCGAGGCGGAGGTGGAGA
GGTTACGCCTGGAGGGAGAGAGGACCGGGTCGGCCTGCCACCAGGACACC
CAGAGGCTACGGCGCTGGTGGAACGGCGTTCTCGCGAGGCGTCCGACCAA
GCCGCCAGCCGTTTCCGGGTCGCGCAGCAGCTGGAGGAGAGGGTGAGGCA
CGACGCGCAGAAGGAGGCGGCCGCTCTGCGGGGAGGGTTGTCGCGTCTCG
AGGCGGAGGTGGAGAGGTTACGCCTGGAGGGAGAGAGGACCGGGTCGGCC
TGCCACCAGGACACCCAGAGGCTACGTGGAGAGGCGGACCGCGCGAGGTC
CGAGGCGTCTCGGGTTCTCCGCGAGAAGGAGGCATTGCGGGAGCGGGTGG
CGGCACTCCAATCCGCCGCGGATCGGGCGGTGGAAGCGGCGGAAGCGGCG
AGCCGCGATCGTGACGAGACGAGGGTGGCGGCGGCGACGATGGCGCAGCG
GGCGCAGCAGGAACGGGAAGGGTTGGCAGAGATGGAGGGGGAGAACGAGG
GCCTCCGAGTGAGGCTGCAGATGGCGGAGGAGGAGCTACGGAGCCTCGTC
GCTGAAGCTGATCAGTGGAGAGGCGGACCGCGCGAGGTCCGAGGCGTCTC
GGGTTCTCCGCGAGAAGGAGGCATTGCGGGAGCGGGTGGCGGCACTCCAA
TCCGCCGCGGATCGGGCGGTGGAAGCGGCGGAAGCGGCGAGCCGCGATCG
TGACGAGACGAGGGTGGCGGCGGCGACGATGGCGCAGCGGGCGCAGCAGG
AACGGGAAGGGTTGGCAGAGATGGAGGGGGAGAACGAGGGCCTCCGAGTG
AGGCTGCAGATGGCGGAGGAGGAGCTACGGAGCCTCGTCGCTGAAGCTGA
TCAGGCCCGGGAGGCTCACGTCCGCGCCCTTAAGGACATACGGCGCACCG
CCGGCGCCGAGCGGGACTCGCACGTGGCCCGCGTCCGGTACGAGCTGGAG
ACCCTCCGACGGCGAGCCCGGCGGTCCGTCCGCAAGGAGAGAAAACGGAG
CCGCGCGTACAAGGCTCAGGCAATCGAGGCGCACCAACGGGGGCAGAGGA
CGAGGCACCTGCTCCAGTCTCGCGCGACGGCGTTGGCGGCGGCTGCGGCT
ACGGCGGGGGGAAGCGGGGGAGCGGCGATGGGGGCGCGGTGGAGGGGGCT
TGGCCAGCCGGGGGTGGGGCATGGAGGAGGAGCGGGAGGAGGGAGGATAG
GGATGGACTCTACATCATCCACGTTTGGCGCGGCCCGGGAGGCTCACGTC
CGCGCCCTTAAGGACATACGGCGCACCGCCGGCGCCGAGCGGGACTCGCA
CGTGGCCCGCGTCCGGTACGAGCTGGAGACCCTCCGACGGCGAGCCCGGC
GGTCCGTCCGCAAGGAGAGAAAACGGAGCCGCGCGTACAAGGCTCAGGCA
ATCGAGGCGCACCAACGGGGGCAGAGGACGAGGCACCTGCTCCAGTCTCG
CGCGACGGCGTTGGCGGCGGCTGCGGCTACGGCGGGGGGAAGCGGGGGAG
CGGCGATGGGGGCGCGGTGGAGGGGGCTTGGCCAGCCGGGGGTGGGGCAT
GGAGGAGGAGCGGGAGGAGGGAGGATAGGGATGGACTCTACATCATCCAC
GTTTGGCGCGGTTTTCGACGGTTTGCCAAGCGATGCGGCCAAGACAATGG
AACCGCTGGAGCTCACCCAAGCCCTACGGAGGGTGCGCTCCTCGCGCCGG
AGACGAGCCCAAGGCGAGAAACGCGACGGTGGCCCCTGCAGGACTCGCGC
CAATAACAACGGTGGCGTCGCGGACGAAGGGCTGTCCCGGCCTTCGTCCG
TGGGGGACGGAGAGGGGGAGGAAGGAGGGCTGGAACCGCGTGGGCGAGGT
GGGTGCGAGGAGTCGGGGGTTTTCGACGGTTTGCCAAGCGATGCGGCCAA
GACAATGGAACCGCTGGAGCTCACCCAAGCCCTACGGAGGGTGCGCTCCT
CGCGCCGGAGACGAGCCCAAGGCGAGAAACGCGACGGTGGCCCCTGCAGG
ACTCGCGCCAATAACAACGGTGGCGTCGCGGACGAAGGGCTGTCCCGGCC
TTCGTCCGTGGGGGACGGAGAGGGGGAGGAAGGAGGGCTGGAACCGCGTG
GGCGAGGTGGGTGCGAGGAGTCGGGG
back to top