mRNA_H-canaliculatus_F_contig1518.3866.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1518.3866.1 vs. uniprot
Match: D8LNF7_ECTSI (Transmembrane protein 107 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF7_ECTSI) HSP 1 Score: 133 bits (334), Expect = 3.790e-37 Identity = 70/81 (86.42%), Postives = 77/81 (95.06%), Query Frame = 1
Query: 1 MRIEDKVIPARFLVTLGHLIGVIMIFKTKSDNVYAGLSSDPTVAEVATANTDVNAALAVAMVCFGLDFVSIFFGLSIFMMK 243
M+IED+VIPARFLVTLGHL+GVI+I KTKSDNVYAGLSSDPT AEVATAN VNAALA+AMVCFGLDF+S+FFGLSIFMMK
Sbjct: 1 MKIEDRVIPARFLVTLGHLVGVILISKTKSDNVYAGLSSDPTAAEVATANGHVNAALALAMVCFGLDFMSLFFGLSIFMMK 81
BLAST of mRNA_H-canaliculatus_F_contig1518.3866.1 vs. uniprot
Match: A0A835ZGM2_9STRA (Transmembrane protein 107 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGM2_9STRA) HSP 1 Score: 126 bits (316), Expect = 1.850e-34 Identity = 68/145 (46.90%), Postives = 95/145 (65.52%), Query Frame = 1
Query: 4 RIEDKVIPARFLVTLGHLIGVIMIFKTKSDNVYAGLSS-DPTVAEVATANTDVNAALAVAMVCFGLDFVSIFFGLSIFMMKVNALQTVAHFSGAVLIANFITEEWDYRSLWRVYNVHIVGLCNLPTALVEVAVLIAVFYLKSSLY 435
RIE+ +IPARFL TLGH + V+++ +K+ V AGL+ P+ ++A AN++VN AL A+ CF LDF + FG S FM KVNALQ + HF+G VL + + EEWDYR W +IV +CN+P A+ E+ V+ +F LK Y
Sbjct: 4 RIEEALIPARFLTTLGHFLAVLILAGSKATVVNAGLAGGQPSADDIAAANSEVNGALIFALFCFLLDFAGLGFGFSAFMPKVNALQILVHFAGGVLTSRLVVEEWDYRVFW-----YIVAMCNVPAAIAELLVMALIFGLKVYSY 143
BLAST of mRNA_H-canaliculatus_F_contig1518.3866.1 vs. uniprot
Match: A0A7S2UVK1_9STRA (Transmembrane protein 107 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVK1_9STRA) HSP 1 Score: 125 bits (315), Expect = 2.400e-34 Identity = 63/145 (43.45%), Postives = 96/145 (66.21%), Query Frame = 1
Query: 1 MRIEDKVIPARFLVTLGHLIGVIMIFKTKSDNVYAGLSSDPTVAEVATANTDVNAALAVAMVCFGLDFVSIFFGLSIFMMKVNALQTVAHFSGAVLIANFITEEWDYRSLWRVYNVHIVGLCNLPTALVEVAVLIAVFYLKSSLY 435
M +E ++IPARFL+TLGHLI +M+ + VYAGLS+D T E+A A ++ A+ +A++CF +D + + G +IF +VN Q +AHF G + ++ FI E WDYR LW +IV CN+ TALVE+ V++ +F +++ LY
Sbjct: 1 MGLERRLIPARFLITLGHLIPTVMVMYVMEEQVYAGLSADATDKEIAAATAELEGAVLLAIICFLVDLLGLVAGFTIFSTRVNVFQIIAHFVGGIQVSTFIHEVWDYRVLW-----YIVVFCNVTTALVEIFVILRIFVVRALLY 140
BLAST of mRNA_H-canaliculatus_F_contig1518.3866.1 vs. uniprot
Match: F0YLV6_AURAN (Transmembrane protein 107 (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLV6_AURAN) HSP 1 Score: 119 bits (298), Expect = 7.580e-32 Identity = 60/138 (43.48%), Postives = 86/138 (62.32%), Query Frame = 1
Query: 22 IPARFLVTLGHLIGVIMIFKTKSDNVYAGLSSDPTVAEVATANTDVNAALAVAMVCFGLDFVSIFFGLSIFMMKVNALQTVAHFSGAVLIANFITEEWDYRSLWRVYNVHIVGLCNLPTALVEVAVLIAVFYLKSSLY 435
IPARF++T+GHL+ ++MI TK +N+ AGL DP A A + AA V + CF D V I G S+F K N LQ + HF+G VL+++ I + W Y+ +W V V CN+PTAL E+A+L+A+F LK ++
Sbjct: 2 IPARFMLTMGHLVSLLMIVYTKKENILAGLPRDPGKARYDEAKAEFEAAYVVCLACFVFDMVGILTGTSLFFPKANLLQIICHFAGGVLVSSMIAQSWQYQYIWLV-----VAFCNVPTALCEIAILVAIFVLKIVVF 134
BLAST of mRNA_H-canaliculatus_F_contig1518.3866.1 vs. uniprot
Match: A0A7S3NE17_9STRA (Transmembrane protein 107 n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NE17_9STRA) HSP 1 Score: 114 bits (284), Expect = 1.290e-29 Identity = 56/144 (38.89%), Postives = 92/144 (63.89%), Query Frame = 1
Query: 4 RIEDKVIPARFLVTLGHLIGVIMIFKTKSDNVYAGLSSDPTVAEVATANTDVNAALAVAMVCFGLDFVSIFFGLSIFMMKVNALQTVAHFSGAVLIANFITEEWDYRSLWRVYNVHIVGLCNLPTALVEVAVLIAVFYLKSSLY 435
R+ + +IPARF++T+GHL+ ++MI TK +N++AGL DP+ + A + A ++++CF D IFFG SIF +K+N LQ + HF+G V+++ I + W Y+ +W I+ + N PTA E+A+LIA+F L ++
Sbjct: 5 RVLEVLIPARFVLTVGHLVAMLMIAYTKRENLFAGLPVDPSNTRLDKAKKEFEIAYILSLICFAFDLFGIFFGTSIFFVKMNLLQIICHFTGGVMVSLMIEQAWQYQYIWL-----ILAITNFPTAFFEIAILIAIFGLNIIVF 143
BLAST of mRNA_H-canaliculatus_F_contig1518.3866.1 vs. uniprot
Match: A0A8J2S4M7_9STRA (Transmembrane protein 107 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S4M7_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 5.970e-24 Identity = 52/141 (36.88%), Postives = 83/141 (58.87%), Query Frame = 1
Query: 13 DKVIPARFLVTLGHLIGVIMIFKTKSDNVYAGLSSDPTVAEVATANTDVNAALAVAMVCFGLDFVSIFFGLSIFMMKVNALQTVAHFSGAVLIANFITEEWDYRSLWRVYNVHIVGLCNLPTALVEVAVLIAVFYLKSSLY 435
+ +IPARFL+T+GHL+ V+ + T+ +N+ + +S+DP A + A A+ +VCF +D + I G S+F K N LQ + HF G+ I + IT+ W Y+ +W + CN+P AL EV++LI F LK ++
Sbjct: 7 NLLIPARFLLTVGHLVSVLTMVHTRKENLSSAVSADPK-----DAQKEFMMAYAICLVCFAVDVLGILMGTSLFFPKANLLQIICHFVGSCFITSMITQSWQYQYIW-----FSIATCNIPCALCEVSILIGTFALKVVVF 137
BLAST of mRNA_H-canaliculatus_F_contig1518.3866.1 vs. uniprot
Match: A0A6H5JQF3_9PHAE (Transmembrane protein 107 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQF3_9PHAE) HSP 1 Score: 93.2 bits (230), Expect = 2.640e-22 Identity = 46/65 (70.77%), Postives = 56/65 (86.15%), Query Frame = 1
Query: 241 KVNALQTVAHFSGAVLIANFITEEWDYRSLWRVYNVHIVGLCNLPTALVEVAVLIAVFYLKSSLY 435
+VNALQTVAHFSGAVLIA+FI+E WDYR LW+ IVG C++PTA+VEVAVL +VF+LKSS+Y
Sbjct: 14 RVNALQTVAHFSGAVLIAHFISEAWDYRCLWQ-----IVGCCSVPTAIVEVAVLFSVFHLKSSVY 73
BLAST of mRNA_H-canaliculatus_F_contig1518.3866.1 vs. uniprot
Match: A0A7S3HJZ1_9STRA (Transmembrane protein 107 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJZ1_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 1.360e-20 Identity = 48/143 (33.57%), Postives = 79/143 (55.24%), Query Frame = 1
Query: 7 IEDKVIPARFLVTLGHLIGVIMIFKTKSDNVYAGLSSDPTVAEVATANTDVNAALAVAMVCFGLDFVSIFFGLSIFMMKVNALQTVAHFSGAVLIANFITEEWDYRSLWRVYNVHIVGLCNLPTALVEVAVLIAVFYLKSSLY 435
++ +I ARF+ T+GH I ++++F T +N+ L + E A AAL + +CF DF +FFG S+F N + HF G +L++ +T W+Y++LW IV CN+PTAL E+++L+ + K +Y
Sbjct: 4 VQQYLISARFITTMGHFIALLLLFSTIDNNIDESLGDNYDSEEKQWATETSWAALIIGFLCFVCDFAGLFFGTSLFYNTGNMFHILVHFIGGILLSWVVTYSWNYKALWP-----IVATCNIPTALYEISILLGIKVFKIIVY 141
BLAST of mRNA_H-canaliculatus_F_contig1518.3866.1 vs. uniprot
Match: A0A3P3Y2A6_PLABS (Transmembrane protein 107 n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y2A6_PLABS) HSP 1 Score: 85.1 bits (209), Expect = 2.430e-18 Identity = 50/134 (37.31%), Postives = 82/134 (61.19%), Query Frame = 1
Query: 1 MRIEDKVIPARFLVTLGHLIGVIMIFKTKSDNVYAGLSSDPTVAEVATANTDVNAALAVAMVCFGLDFVSIFFGLSIFMMKVNALQTVAHFSGAVLIANFITEEWDYRSLWRVYNVHIVGLCNLPTALVEVAVL 402
M IE ++P RFL+T HL+ ++ +F +K N+ A L T + ++ N + AAL +A+VCF ++++ +F G+SI N+ VAHF GA+LIA+F E W+ ++W V ++ L +P AL+E +VL
Sbjct: 1 MGIESTLLPTRFLLTTVHLMAILTLFNSKDANIRAALPISYTTVQYSSMNNQMLAALWIAVVCFIVEYLGMFSGVSIMKHAHNSFYVVAHFIGAILIASFALESWNMLAIWYV----VIPLSLVP-ALLEASVL 129
BLAST of mRNA_H-canaliculatus_F_contig1518.3866.1 vs. uniprot
Match: A0A6J2UR21_CHACN (Transmembrane protein 107 n=2 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2UR21_CHACN) HSP 1 Score: 77.8 bits (190), Expect = 1.650e-15 Identity = 47/143 (32.87%), Postives = 81/143 (56.64%), Query Frame = 1
Query: 1 MRIEDKVIPARFLVTLGHLIGVIMIFKTKSDNVYAGLSSDPTVAEVATANTDVNAALAVAMVCFGLDFVSIFFGLSIFMMKVNALQTVAHFSGAVLIANFITEEWDYRSLWRVYNVHIVGLCNLPTALVEVAVLIAVFYLKSS 429
M + + ++PARFL + HL+ VI IF ++S+NV A L D + E T +T + AL+V + FG++ F G+S+F + L AH S ++ ++ F+ ++W+ + W ++ C++ AL E+ + IAVF LK
Sbjct: 1 MTVINSIVPARFLTLIAHLVIVITIFWSRSNNVQACLPLDFSEEEYNTEDTRLVVALSVTLGLFGVELAGFFSGVSMFNHSQSLLSLAAHCSASICLSFFVFQKWECWTYWFIF-----AFCSVIPALCELILFIAVFGLKKK 138 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1518.3866.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1518.3866.1 >prot_H-canaliculatus_F_contig1518.3866.1 ID=prot_H-canaliculatus_F_contig1518.3866.1|Name=mRNA_H-canaliculatus_F_contig1518.3866.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=146bp MRIEDKVIPARFLVTLGHLIGVIMIFKTKSDNVYAGLSSDPTVAEVATANback to top mRNA from alignment at H-canaliculatus_F_contig1518:2705..4456- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1518.3866.1 ID=mRNA_H-canaliculatus_F_contig1518.3866.1|Name=mRNA_H-canaliculatus_F_contig1518.3866.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1752bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1518:2705..4456- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1518:2705..4456- >mRNA_H-canaliculatus_F_contig1518.3866.1 ID=mRNA_H-canaliculatus_F_contig1518.3866.1|Name=mRNA_H-canaliculatus_F_contig1518.3866.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=876bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1518:2705..4456- (Hapterophycus canaliculatus Oshoro5f female)back to top |