mRNA_H-canaliculatus_F_contig1517.3862.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1517.3862.1
Unique NamemRNA_H-canaliculatus_F_contig1517.3862.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1517.3862.1 vs. uniprot
Match: A0A165GQK3_9BASI (WSC domain-containing protein n=1 Tax=Calocera cornea HHB12733 TaxID=1353952 RepID=A0A165GQK3_9BASI)

HSP 1 Score: 62.4 bits (150), Expect = 2.780e-9
Identity = 31/66 (46.97%), Postives = 38/66 (57.58%), Query Frame = 1
Query:   49 LTLSLCQSTCAGEGALYFGVYDGKFCSCGDSQTFLSSGDKSAGTCDVVCAGDADEVCGGTESYSLY 246
            +T+ LC STC+  G    GV  G  C C D  T+       AG CDV CAGDA EVCGG + ++LY
Sbjct:  744 MTVELCLSTCSARGLPLAGVEGGDTCYCADG-TYYGGHPDPAGPCDVPCAGDASEVCGGPQVFNLY 808          
BLAST of mRNA_H-canaliculatus_F_contig1517.3862.1 vs. uniprot
Match: A0A1G4KNB2_9SACH (LANO_0H19020g1_1 n=1 Tax=Lachancea nothofagi CBS 11611 TaxID=1266666 RepID=A0A1G4KNB2_9SACH)

HSP 1 Score: 60.8 bits (146), Expect = 8.170e-9
Identity = 27/81 (33.33%), Postives = 48/81 (59.26%), Query Frame = 1
Query:   22 FFYENEFEHLTLSLCQSTCAGEGALYFGVYDGKFCSCGDSQTFLSSGDKSAGTCDVVCAGDADEVCGGTESYSLYAVTMDM 264
            F + N  +  T SLC +TC    + YF + +G  C CG+S    S  + ++ +C  VC G  D++CGG++++S+YA+  ++
Sbjct:   31 FSFNNTAQWQTSSLCYATCKATSSKYFALKNGGDCYCGNSNP--SDSESTSSSCTTVCNGYGDQMCGGSDAFSVYAIEENL 109          
BLAST of mRNA_H-canaliculatus_F_contig1517.3862.1 vs. uniprot
Match: M5BTD2_THACB (Putative glycosidase C21B10.07 n=4 Tax=Rhizoctonia solani TaxID=456999 RepID=M5BTD2_THACB)

HSP 1 Score: 57.8 bits (138), Expect = 1.120e-7
Identity = 28/69 (40.58%), Postives = 41/69 (59.42%), Query Frame = 1
Query:   49 LTLSLCQSTCAGEGALYFGVYDGKFCSCGDSQTFLSSGDKSAGTCDVVCAGDADEVCGGTESYSLYAVT 255
            LT + C  +CA  G    G   GK C CG++ +  ++  +S+G CD+ CAGDA +VCGG    +L+A T
Sbjct:   76 LTTASCIKSCAANGYKLAGTQFGKECWCGNALSTGANAGQSSGGCDMPCAGDAGQVCGGNYHLNLFAAT 144          
BLAST of mRNA_H-canaliculatus_F_contig1517.3862.1 vs. uniprot
Match: W9Y2J7_9EURO (Uncharacterized protein n=1 Tax=Capronia epimyces CBS 606.96 TaxID=1182542 RepID=W9Y2J7_9EURO)

HSP 1 Score: 55.8 bits (133), Expect = 1.820e-7
Identity = 28/80 (35.00%), Postives = 41/80 (51.25%), Query Frame = 1
Query:   28 YENEFEHLTLSLCQSTCAGEGALYFGVYDGKFCSCGDSQTFLSSGDKSA----GTCDVVCAGDADEVCGGTESYSLYAVT 255
            Y      +T  LC  TC+ +G    GV  G+ C C +S   +  G K+     G C ++CAGD DE+CGG+    ++ VT
Sbjct:  100 YSTSSSSMTQDLCVQTCSAKGYTLAGVEYGRECYCANSLATVQVGGKAVQAAEGDCGMLCAGDRDELCGGSSRIGVWMVT 179          
BLAST of mRNA_H-canaliculatus_F_contig1517.3862.1 vs. uniprot
Match: UPI0018D93BE5 (uncharacterized protein LOC119728725 n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D93BE5)

HSP 1 Score: 57.0 bits (136), Expect = 2.170e-7
Identity = 27/74 (36.49%), Postives = 44/74 (59.46%), Query Frame = 1
Query:   28 YENEFEHLTLSLCQSTCAGEGALYFGVYDGKFCSCGDSQTFLSSGDKSAGT-CDVVCAGDADEVCGGTESYSLY 246
            +  E + + ++LC   C   G  + G+  G+ CSCG+S   LS G +   + C++ CAGD DE+CGG+ + S+Y
Sbjct:  152 FSTESDAIDIALCLDICRNGGHTFAGMAKGRRCSCGNS---LSGGGRQGNSGCNMACAGDMDEICGGSATASIY 222          
BLAST of mRNA_H-canaliculatus_F_contig1517.3862.1 vs. uniprot
Match: A0A5N5QQT7_9AGAM (Glycosidase C21B10,07 n=1 Tax=Ceratobasidium theobromae TaxID=1582974 RepID=A0A5N5QQT7_9AGAM)

HSP 1 Score: 55.5 bits (132), Expect = 7.260e-7
Identity = 25/69 (36.23%), Postives = 40/69 (57.97%), Query Frame = 1
Query:   49 LTLSLCQSTCAGEGALYFGVYDGKFCSCGDSQTFLSSGDKSAGTCDVVCAGDADEVCGGTESYSLYAVT 255
            LT + C  +CA  G  + G   G+ C CG S     +G+ ++G C++ CAGDA + CGG    +LY+++
Sbjct:   73 LTTASCIKSCAASGYKFAGTQFGQECWCGSSLNTAVAGNSASGGCNMPCAGDATQTCGGNYRMNLYSLS 141          
BLAST of mRNA_H-canaliculatus_F_contig1517.3862.1 vs. uniprot
Match: UPI001425577F (WSC domain-containing protein ARB_07867-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425577F)

HSP 1 Score: 55.1 bits (131), Expect = 9.540e-7
Identity = 27/70 (38.57%), Postives = 39/70 (55.71%), Query Frame = 1
Query:   49 LTLSLCQSTCAGEGALYFGVYDGKFCSCGDSQTFLSSGDKSAGTCDVVCAGDADEVCGGTESYSLYAVTM 258
            +T+  C + C G G +Y G+  GK C CG   T+   G      C+V CAG++ E+CGGT   S+YA  +
Sbjct:   54 MTIDQCITHCHGRGHMYAGLQYGKECFCG-GNTYSKYGRVPDTNCNVKCAGNSQEICGGTWKISVYATEV 122          
BLAST of mRNA_H-canaliculatus_F_contig1517.3862.1 vs. uniprot
Match: A0A167GQ01_CALVF (Glycoside hydrolase family 71 protein n=1 Tax=Calocera viscosa (strain TUFC12733) TaxID=1330018 RepID=A0A167GQ01_CALVF)

HSP 1 Score: 54.7 bits (130), Expect = 1.420e-6
Identity = 24/66 (36.36%), Postives = 40/66 (60.61%), Query Frame = 1
Query:   52 TLSLCQSTCAGEGALYFGVYDGKFCSCGDSQTFLSSGDKSAGTCDVVCAGDADEVCGGTESYSLYA 249
            T+  C+  C+ +G +Y GV  G  C CG++ +  + G  S+  C+V CAG++ E CGG+   +LY+
Sbjct:  317 TIESCEQFCSSQGYVYAGVEYGTQCFCGNTLSNGAGGTTSSSDCNVACAGNSAETCGGSYRLNLYS 382          
BLAST of mRNA_H-canaliculatus_F_contig1517.3862.1 vs. uniprot
Match: A0A7V5V4X8_9DELT (WSC domain-containing protein (Fragment) n=1 Tax=Desulfobulbaceae bacterium TaxID=2053307 RepID=A0A7V5V4X8_9DELT)

HSP 1 Score: 54.3 bits (129), Expect = 1.860e-6
Identity = 28/69 (40.58%), Postives = 41/69 (59.42%), Query Frame = 1
Query:   46 HLTLSLCQSTCAGEGALYFGVYDGKFCSCGDSQTFLSSGDKSAGTCDVVCAGDADEVCGGTESYSLYAV 252
            ++T  LC +TC  +G  Y G+    +C CGDS  +  SG+  A  C++ CAG+  E+CGG  + SLY V
Sbjct:  152 NMTKELCMTTCQQKGFQYAGLQYSSYCFCGDS--YGKSGE--ANNCNMPCAGNKSEICGGDWANSLYRV 216          
BLAST of mRNA_H-canaliculatus_F_contig1517.3862.1 vs. uniprot
Match: M5FVV6_DACPD (WSC-domain-containing protein n=1 Tax=Dacryopinax primogenitus (strain DJM 731) TaxID=1858805 RepID=M5FVV6_DACPD)

HSP 1 Score: 53.9 bits (128), Expect = 2.590e-6
Identity = 30/78 (38.46%), Postives = 41/78 (52.56%), Query Frame = 1
Query:   49 LTLSLCQSTCAGEGALYFGVYDGKFCSCGDSQTFLSSGDKSAGTCDVVCAGDADEVCGGTESYSLYA---VTMDMDSG 273
            LT+ LC + CAG    Y  V  G  C C D   +  +   SA  C   C G+A+E CGGT  +SLYA   +T+ + +G
Sbjct:  497 LTVELCVNVCAGLDYPYAAVEAGDECYCSDGL-YYGAVPASASACTTACIGNAEETCGGTNHFSLYADPDITLALGAG 573          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1517.3862.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A165GQK3_9BASI2.780e-946.97WSC domain-containing protein n=1 Tax=Calocera cor... [more]
A0A1G4KNB2_9SACH8.170e-933.33LANO_0H19020g1_1 n=1 Tax=Lachancea nothofagi CBS 1... [more]
M5BTD2_THACB1.120e-740.58Putative glycosidase C21B10.07 n=4 Tax=Rhizoctonia... [more]
W9Y2J7_9EURO1.820e-735.00Uncharacterized protein n=1 Tax=Capronia epimyces ... [more]
UPI0018D93BE52.170e-736.49uncharacterized protein LOC119728725 n=1 Tax=Patir... [more]
A0A5N5QQT7_9AGAM7.260e-736.23Glycosidase C21B10,07 n=1 Tax=Ceratobasidium theob... [more]
UPI001425577F9.540e-738.57WSC domain-containing protein ARB_07867-like n=1 T... [more]
A0A167GQ01_CALVF1.420e-636.36Glycoside hydrolase family 71 protein n=1 Tax=Calo... [more]
A0A7V5V4X8_9DELT1.860e-640.58WSC domain-containing protein (Fragment) n=1 Tax=D... [more]
M5FVV6_DACPD2.590e-638.46WSC-domain-containing protein n=1 Tax=Dacryopinax ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1517contigH-canaliculatus_F_contig1517:5538..6155 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score61.2
Seed ortholog evalue2.9e-07
Seed eggNOG ortholog2880.D7FJ68
Preferred nameMTPAP
KEGG koko:K08342,ko:K16462,ko:K17478,ko:K18060
KEGG Pathwayko04136,ko04138,ko04140,map04136,map04138,map04140
EggNOG free text desc.importin-alpha family protein binding
EggNOG OGsCOG0086@1,KOG0260@2759,KOG4725@1,KOG4725@2759
EC2.7.7.19
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko01009,ko03029,ko03036,ko03110,ko04131,ko04812
Hectar predicted targeting categoryother localisation
Exons2
Model size282
Cds size282
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929258.218083-CDS-H-canaliculatus_F_contig1517:5537..57591622929258.218083-CDS-H-canaliculatus_F_contig1517:5537..5759Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1517 5538..5759 -
1696845739.3361616-CDS-H-canaliculatus_F_contig1517:5537..57591696845739.3361616-CDS-H-canaliculatus_F_contig1517:5537..5759Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1517 5538..5759 -
1622929258.308888-CDS-H-canaliculatus_F_contig1517:6095..61551622929258.308888-CDS-H-canaliculatus_F_contig1517:6095..6155Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1517 6096..6155 -
1696845739.349719-CDS-H-canaliculatus_F_contig1517:6095..61551696845739.349719-CDS-H-canaliculatus_F_contig1517:6095..6155Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1517 6096..6155 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1517.3862.1prot_H-canaliculatus_F_contig1517.3862.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1517 5538..6155 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1517.3862.1

>prot_H-canaliculatus_F_contig1517.3862.1 ID=prot_H-canaliculatus_F_contig1517.3862.1|Name=mRNA_H-canaliculatus_F_contig1517.3862.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=94bp
MGDGEDPFFYENEFEHLTLSLCQSTCAGEGALYFGVYDGKFCSCGDSQTF
LSSGDKSAGTCDVVCAGDADEVCGGTESYSLYAVTMDMDSGDDS
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mRNA from alignment at H-canaliculatus_F_contig1517:5538..6155-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1517.3862.1 ID=mRNA_H-canaliculatus_F_contig1517.3862.1|Name=mRNA_H-canaliculatus_F_contig1517.3862.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=618bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1517:5538..6155- (Hapterophycus canaliculatus Oshoro5f female)
ATGGGCGATGGTGAAGACCCGTTCTTCTACGAAAACGAATTCGAACATCT CACGCTCTCTGTGAGTCAGCCAGTCAGTTGGTCTGCAAGCAACGTCGGCG CACGACGCGAGGGTTGAACGAATTCCAATTTGATTGTTATTTTGTCATCT TGGAGCGTTTTGGCGAGCAGCTAATGTGCGAGGAGTACGGAAACACAGAA GCCGCTAGAGTTTTGTTCGTTCTTCACTTGCAGCGCTAATCCTGGGTGTC GCTCGGGCAGGGTCCCCGATTCGGTCTCCGCTTCCAACGTTCGTAGGGTG TGCGGAGGGTGTCCATCACAACCGGTCTTCTAAGCCTTCCTCGACGCTCT CCTCGCCACCTGTTTCACGTGGAATTAATAAAATGTCTCCCTCCAGCTCT GCCAATCCACTTGTGCTGGAGAAGGTGCCCTGTACTTCGGAGTATACGAT GGCAAGTTTTGCAGCTGCGGCGACAGCCAGACCTTCTTGAGTTCCGGGGA CAAGTCGGCGGGGACGTGCGACGTAGTCTGCGCGGGAGACGCCGATGAGG TTTGCGGGGGAACAGAGAGCTACAGCCTGTACGCAGTCACGATGGACATG GATAGCGGCGATGATAGT
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1517:5538..6155-

>mRNA_H-canaliculatus_F_contig1517.3862.1 ID=mRNA_H-canaliculatus_F_contig1517.3862.1|Name=mRNA_H-canaliculatus_F_contig1517.3862.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=564bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1517:5538..6155- (Hapterophycus canaliculatus Oshoro5f female)
ATGGGCGATGGTGAAGACCCGTTCTTCTACGAAAACGAATTCGAACATCT
CACGCTCTCTATGGGCGATGGTGAAGACCCGTTCTTCTACGAAAACGAAT
TCGAACATCTCACGCTCTCTCTCTGCCAATCCACTTGTGCTGGAGAAGGT
GCCCTGTACTTCGGAGTATACGATGGCAAGTTTTGCAGCTGCGGCGACAG
CCAGACCTTCTTGAGTTCCGGGGACAAGTCGGCGGGGACGTGCGACGTAG
TCTGCGCGGGAGACGCCGATGAGGTTTGCGGGGGAACAGAGAGCTACAGC
CTGTACGCAGTCACGATGGACATGGATAGCGGCGATGATAGTCTCTGCCA
ATCCACTTGTGCTGGAGAAGGTGCCCTGTACTTCGGAGTATACGATGGCA
AGTTTTGCAGCTGCGGCGACAGCCAGACCTTCTTGAGTTCCGGGGACAAG
TCGGCGGGGACGTGCGACGTAGTCTGCGCGGGAGACGCCGATGAGGTTTG
CGGGGGAACAGAGAGCTACAGCCTGTACGCAGTCACGATGGACATGGATA
GCGGCGATGATAGT
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