mRNA_H-canaliculatus_F_contig15147.3851.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig15147.3851.1
Unique NamemRNA_H-canaliculatus_F_contig15147.3851.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig15147.3851.1 vs. uniprot
Match: A0A6H5L7R8_9PHAE (ERCC4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L7R8_9PHAE)

HSP 1 Score: 456 bits (1172), Expect = 1.120e-154
Identity = 255/350 (72.86%), Postives = 274/350 (78.29%), Query Frame = 1
Query:    1 QSSLLQKGVRCETRQLPLGDMLWIARRTDDPTSEVLLGYIVERKTASDLASSIIDGRYDEQKRRLKLSGLRRRIYLVEGNLSHQSQLAPSALRSALASSQACGGLAVVQCDSLRDSVDFLARTHRHIASLLENTCKSHAATGVEGGGGGEVRGAGLWPETGSGARDGDTGGGAMLLPAMTYGEYAQGCAKRAGSTTARRVLGAMVRQAPGCSATRAEAIVRAFESPLGLMLALEHAAGKGGGGGEDGVDSDDVARMKKADDLLAGLVCRGGAGTNKLPQPLRRLLCRLFLAESVD---GGVSGGGAG--GRPKQATDDHSNSIMSCDLLGRDPYCADGWDAEPMSQDDPY 1035
            QSSLLQKG+RCETRQLPLGDMLWIAR+ DDPTSEVLLGYIVERKTASDLASSIIDGRY+EQKRRLKLSGLRRRIYLVEGNL+HQ QLAP+ALR+AL SSQACGGLAVVQCD LRD+V+FLARTHRHIASLLE +C+               R AGL P  GS  R+  +GG AML PAMTYGEYAQGCAKRAGSTT R+VLGAMVRQAPGCSA RAEAIVRAF+SPLGLMLALE AA        DG+  DD ARMK+AD LL GLVC GGAGTNKLPQPLRRLLCRLFL +SVD    G S GG G  G P  A         + DL    PYC DGWD EPM+QDDPY
Sbjct:  265 QSSLLQKGIRCETRQLPLGDMLWIARKRDDPTSEVLLGYIVERKTASDLASSIIDGRYEEQKRRLKLSGLRRRIYLVEGNLNHQEQLAPAALRTALVSSQACGGLAVVQCDGLRDTVNFLARTHRHIASLLELSCR---------------REAGLSPVRGS--RE-CSGGRAMLRPAMTYGEYAQGCAKRAGSTTVRQVLGAMVRQAPGCSAARAEAIVRAFDSPLGLMLALERAASG------DGIAGDDAARMKRADALLGGLVCSGGAGTNKLPQPLRRLLCRLFLGDSVDDEGAGASAGGVGAAGPPTAAGGYGRRGHSNADLSVGGPYCVDGWDVEPMNQDDPY 590          
BLAST of mRNA_H-canaliculatus_F_contig15147.3851.1 vs. uniprot
Match: A0A836CKB8_9STRA (Restriction endonuclease type II-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKB8_9STRA)

HSP 1 Score: 162 bits (410), Expect = 4.170e-44
Identity = 102/240 (42.50%), Postives = 136/240 (56.67%), Query Frame = 1
Query:    1 QSSLLQKGVRCETRQLPLGDMLWIARRTDDPT----SEVLLGYIVERKTASDLASSIIDGRYDEQKRRLKLSGLRRRIYLVEGNLSHQSQLAPSALRSALASSQACGGLAVVQCDSLRDSVDFLARTHRHIASLLENTCKSHAATGVEGGGGGEVRGAGLWPETGSGARDGDTGGGAMLLPAMTYGEYAQGCAKRAGSTTARRVLGAMVRQAPGCSATRAEAIVRAFESPLGLMLALEHA 708
            Q+++L   + CE R LPLGDMLW+AR  D  +     EVLLGYIVERKTASDL SS++DGR+ EQK R+   GL R IYLVEG ++H ++L P+ LR+A+A +QA  G+ V+   ++ +SV  L R HRHIA+ LE  C+   A+                P TG             + P M+  +Y   C K       R V G  +RQ  GCSA RA AI+  + +PL  MLA+E A
Sbjct:   30 QAAVLNANMLCEVRSLPLGDMLWVARNMDRQSPSYLQEVLLGYIVERKTASDLGSSMVDGRFHEQKHRMARHGLGRVIYLVEGPITHTTRLTPAHLRTAMAHTQAQDGMTVLWTANVTESVAHLQRVHRHIAASLEAACRGITASA---------------PGTG-------------VRPIMSMDQYRAQCGKGKDGDV-RYVFGCQLRQVYGCSAARAAAILNEYPTPLDFMLAMEAA 240          
BLAST of mRNA_H-canaliculatus_F_contig15147.3851.1 vs. uniprot
Match: A0A7S3XK47_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK47_HETAK)

HSP 1 Score: 120 bits (302), Expect = 2.830e-28
Identity = 94/263 (35.74%), Postives = 124/263 (47.15%), Query Frame = 1
Query:    1 QSSLLQKGVRCETRQLPLGDMLWIAR------RTDDPTSEVL--------------------------LGYIVERKTASDLASSIIDGRYDEQKRRLKLSGLRRRIYLVEGNLSHQSQLAPSALRSALASSQACGGLAVVQCDSLRDSVDFLARTHRHIASLLENTCKSHAATGVEGGGGGEVRGAGLWPETGSGARDGDT-GGGAMLLPAMTYGEYAQGCAKRAGSTTARRVLGAMVRQAPGCSATRAEAIVRAFESPLGLM 690
            Q+ LL  GV CE  QL +GDM+W AR        D P ++ L                          LG++VERKTA DLA SIIDGRY EQK RLK SGL +  YLVEG+LS Q  L   +LR+A+AS+    G +V +C +L +SV +LARTH  +A  L     +                          A+ GD       +LP MTY  Y   C K       + + G  ++Q PG S  + +AI+  F +P  LM
Sbjct:    3 QAKLLAVGVACEVGQLAVGDMVWAARWRRPGWHADIPLTQTLNQPQKKKSKSTATILENLHKNEELFVLGFVVERKTAEDLAKSIIDGRYAEQKVRLKKSGLSKVTYLVEGSLSGQDVLPTKSLRTAMASTLIQHGFSVQRCANLDESVRWLARTHHQVARQLGYAVAA--------------------------AQSGDPLDSFKAVLPVMTYRHYHDQCGKLKAQKV-QDIFGMQLKQFPGMSVGKIQAILERFPTPQRLM 238          
BLAST of mRNA_H-canaliculatus_F_contig15147.3851.1 vs. uniprot
Match: A0A7R9UCP7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCP7_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.590e-24
Identity = 67/133 (50.38%), Postives = 88/133 (66.17%), Query Frame = 1
Query:    1 QSSLLQKGVRCETRQLPLGDMLWIA--RRTDDPTSEVLLGYIVERKTASDLASSIIDGRYDEQKRRLKLSGLRRRIYLVEGNLSHQSQLAPSALRSALASSQACGGLAVVQCDSLRDSVDFLARTHRHIASLL 393
            QS LLQ+GV CE R L LGDM+WIA  RR+D    E +L +I+ERK+A+DLA SIIDGRY EQK RL+ SG+    YLVEG  S Q +L   ALR+A+A ++   G  V+  +++  S + L R H  I SL+
Sbjct:  451 QSHLLQRGVSCENRALHLGDMIWIAQDRRSD---VEYVLDFIIERKSAADLAESIIDGRYAEQKSRLRASGIGHVTYLVEGAASSQERLPKQALRTAMAETRVLPGFRVLHTNNIAQSAEELRRMHEQIKSLM 580          
BLAST of mRNA_H-canaliculatus_F_contig15147.3851.1 vs. uniprot
Match: A0A665VS24_ECHNA (MUS81 structure-specific endonuclease subunit n=3 Tax=Echeneis naucrates TaxID=173247 RepID=A0A665VS24_ECHNA)

HSP 1 Score: 107 bits (268), Expect = 4.000e-22
Identity = 84/253 (33.20%), Postives = 121/253 (47.83%), Query Frame = 1
Query:   10 LLQKGVRCETRQLPLGDMLWIARRTDDPTS---------EVLLGYIVERKTASDLASSIIDGRYDEQKRRLKLSGLRRRIYLVE--GNLSHQSQLAPSALRSALASSQACGGLAVVQCDSLRDSVDFLARTHRHIASLLEN---TCKSHAATGVEGGGGGEVRGAGLWPETGSGARDGDTGGGAMLLPA---MTYGEYAQGCAKRAGSTTARRVLGAMVRQAPGCSATRAEAIVRAFESPLGLMLALEHAAGK 717
            L + GV  + R+L +GD LW+AR    P           E+ L YI+ERK   DL  SIIDGR+ EQK RLK  GLRR IYLVE  G  +    L  + L+ A+ ++Q   G  V +   +R+S  +L    R++  L +N   +C+S    G E                   A D + GG   +LP+   +++ E+  G  K   S T R V    + Q  G S  +A AI+  + +P  L+ A E  AG+
Sbjct:  322 LQRNGVNFDVRKLNVGDFLWVAREKVAPIPGQLRAPTGRELALDYIIERKRIDDLCGSIIDGRFREQKFRLKRCGLRRPIYLVEECGTAASHLSLPEATLKQAIINTQVVDGFFVKRVQDVRESAAYLTVMTRYLTKLYQNRTLSCRSRELEGDE-------------------AADEEEGG---ILPSCSLLSFAEFNYGAVKNK-SQTVREVFARQLMQISGLSGDKAAAILEQYNTPHSLLSAYERCAGE 551          
BLAST of mRNA_H-canaliculatus_F_contig15147.3851.1 vs. uniprot
Match: A0A3B3HWT0_ORYLA (MUS81 structure-specific endonuclease subunit n=7 Tax=Oryzias latipes TaxID=8090 RepID=A0A3B3HWT0_ORYLA)

HSP 1 Score: 104 bits (260), Expect = 5.060e-21
Identity = 81/245 (33.06%), Postives = 117/245 (47.76%), Query Frame = 1
Query:   10 LLQKGVRCETRQLPLGDMLWIARRTDDPTS---------EVLLGYIVERKTASDLASSIIDGRYDEQKRRLKLSGLRRRIYLVEGNLSHQSQLA-PSA-LRSALASSQACGGLAVVQCDSLRDSVDFLARTHRHIASLLENTCKSHAATGVEGGGGGEVRGAGLWPETGSGARDGDTGGGAMLLPAMTYGEYAQGCAKRAGSTTARRVLGAMVRQAPGCSATRAEAIVRAFESPLGLMLALEHAA 711
            L + GVR + R+L +GD LW+AR    P           E++L YI+ERK   DL  SIIDGR+ EQK RLK  GLR+ IYLVEG  +  S L+ P A L+ A+ ++Q   G  V +   +R+S  +L    RH+  L +N   S  +   EG                  A D +      L   M++ E+  G  K     T R V    + Q  G S  +A AI++ + +P  L+ A +  +
Sbjct:  388 LQRNGVRFDVRKLNVGDFLWVARENMAPVPGQLRAPAGRELVLDYIIERKRMDDLCGSIIDGRFREQKFRLKRCGLRKPIYLVEGGSTAASHLSLPEATLQQAIVNTQVVDGFFVKRVQDVRESAAYLTVMTRHLTKLYQNCTLSRRSREQEG----------------DAASDEEATASCSL---MSFAEFNHGAVKNK-CQTVREVFARQLMQISGLSGDKAAAILQHYSTPYSLLSAYDRCS 612          
BLAST of mRNA_H-canaliculatus_F_contig15147.3851.1 vs. uniprot
Match: A0A067BND5_SAPPC (ERCC4 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BND5_SAPPC)

HSP 1 Score: 102 bits (254), Expect = 6.110e-21
Identity = 89/243 (36.63%), Postives = 117/243 (48.15%), Query Frame = 1
Query:   10 LLQKGVRCETRQLPLGDMLWIARRTDDPT-------SEVLLGYIVERKTASDLASSIIDGRYDEQKRRLKLSGLRRRIYLVEGNLSHQSQLAPSALRSALASSQACGGLAVVQCDSLRDSVDFLARTHRHIASLLENTCKSHAATGVEGGGGGEVRGAGLWPETGSGARDGDTGGGAMLLPA--MTYGEYAQGCAKRAGSTTARRVLGAMVRQAPGCSATRAEAIVRAFESPLGLMLALEHAA 711
            LL+ GV CE R L LGDM+WIARR   PT        E +L  IVERK  SDLA SIID RY EQK+RL  +GLR  +YL+EG+L+ ++ L  +AL +AL  +Q      V    S  ++V FL+  H H         K              VR A        G           L+P    ++GE+ +   K+A  TT   +   M+ Q PG SATRA  +  A  + L L    + AA
Sbjct:  109 LLEAGVTCEVRGLHLGDMMWIARR-HRPTFGGRAIEEEFVLDVIVERKAVSDLALSIIDKRYTEQKQRLADAGLRYVVYLLEGSLAVETILGATALATALTRTQVLNNYLVHHAASPDETVAFLSALHWHTVRAFSAVYK--------------VRNAAPPTAASIGRLPACLRDFTQLIPTTWQSFGEFNETFRKKAAPTTGE-LYQMMLMQVPGISATRARDLGAAHPTFLSLWQETQKAA 335          
BLAST of mRNA_H-canaliculatus_F_contig15147.3851.1 vs. uniprot
Match: A0A3P9L8A6_ORYLA (MUS81 structure-specific endonuclease subunit n=5 Tax=Oryzias latipes TaxID=8090 RepID=A0A3P9L8A6_ORYLA)

HSP 1 Score: 104 bits (260), Expect = 6.220e-21
Identity = 81/245 (33.06%), Postives = 117/245 (47.76%), Query Frame = 1
Query:   10 LLQKGVRCETRQLPLGDMLWIARRTDDPTS---------EVLLGYIVERKTASDLASSIIDGRYDEQKRRLKLSGLRRRIYLVEGNLSHQSQLA-PSA-LRSALASSQACGGLAVVQCDSLRDSVDFLARTHRHIASLLENTCKSHAATGVEGGGGGEVRGAGLWPETGSGARDGDTGGGAMLLPAMTYGEYAQGCAKRAGSTTARRVLGAMVRQAPGCSATRAEAIVRAFESPLGLMLALEHAA 711
            L + GVR + R+L +GD LW+AR    P           E++L YI+ERK   DL  SIIDGR+ EQK RLK  GLR+ IYLVEG  +  S L+ P A L+ A+ ++Q   G  V +   +R+S  +L    RH+  L +N   S  +   EG                  A D +      L   M++ E+  G  K     T R V    + Q  G S  +A AI++ + +P  L+ A +  +
Sbjct:  365 LQRNGVRFDVRKLNVGDFLWVARENMAPVPGQLRAPAGRELVLDYIIERKRMDDLCGSIIDGRFREQKFRLKRCGLRKPIYLVEGGSAAASHLSLPEATLQQAIVNTQVVDGFFVKRVQDVRESAAYLTVMTRHLTKLYQNCTLSRRSREQEG----------------DAASDEEATASCSL---MSFAEFNHGAVKNK-CQTVREVFARQLMQISGLSGDKAAAILQHYSTPYSLLSAYDRCS 589          
BLAST of mRNA_H-canaliculatus_F_contig15147.3851.1 vs. uniprot
Match: UPI001ED82114 (crossover junction endonuclease MUS81 n=1 Tax=Scatophagus argus TaxID=75038 RepID=UPI001ED82114)

HSP 1 Score: 104 bits (259), Expect = 6.300e-21
Identity = 92/302 (30.46%), Postives = 133/302 (44.04%), Query Frame = 1
Query:   10 LLQKGVRCETRQLPLGDMLWIARRTDDPTS---------EVLLGYIVERKTASDLASSIIDGRYDEQKRRLKLSGLRRRIYLVE--GNLSHQSQLAPSALRSALASSQACGGLAVVQCDSLRDSVDFLARTHRHIASLLENTCKSHAATGVEGGGGGEVRGAGLWPETGSGARDGDTGGGAMLLPAMTYGEYAQGCAKRAGSTTARRVLGAMVRQAPGCSATRAEAIVRAFESPLGLMLALEHAAGKGGGGGEDGVDSDDVARMKKADDLLAGLVCRGGAGTNKLPQPLRRLLCRLFLAESV 882
            L + GV  + R+L +GD LW+AR   +P           E++L YIVERK   DL  SIIDGR+ EQK RLK  GLRR IYLVE  G  +    L  S L+ A+ ++Q   G  V +   +R+S  +L    RH+  L +N      +  +EG GG +                    G +  L  +++ E+  G  K     T R V    + Q  G S  +A AI+  + SP  L+ A E                  V+   K + LL+ +  R G     L   L R +C+L+  +  
Sbjct:  340 LQRNGVNFDVRKLNVGDFLWVAREKVEPVPGQLRAPAGRELVLDYIVERKRMDDLCGSIIDGRFREQKFRLKRCGLRRPIYLVEECGTAASHLSLPESTLQQAIVNTQVVDGFFVKRVQDVRESAAYLTVMTRHLTKLYQNCTLICRSRELEGDGGSDXX---------------XXXGPSCSL--ISFAEFNHGAVKNK-CQTVREVFARQLMQISGLSGDKAAAILEHYNSPHSLLTAYEQC----------------VSEADK-EKLLSSI--RYGKLKRNLGPALSRTVCQLYCTQGA 604          
BLAST of mRNA_H-canaliculatus_F_contig15147.3851.1 vs. uniprot
Match: A0A1C7NCE9_9FUNG (Crossover junction endonuclease MUS81 n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7NCE9_9FUNG)

HSP 1 Score: 103 bits (258), Expect = 1.130e-20
Identity = 83/243 (34.16%), Postives = 121/243 (49.79%), Query Frame = 1
Query:    1 QSSLLQKGVRCETRQLPLGDMLWIARRTDDPTSEVLLGYIVERKTASDLASSIIDGRYDEQKRRLKLSGLRRRIYLVEG-NLSHQSQLAPSALRSALASSQACGGLAVVQCDSLRDSVDFLARTHRHIASLLENT----CKSHAAT-----GVEGGGGGEVRGAGLWPETGSGARDGDTGGGAMLLPAMTYGEYAQGCAKRAGSTTARRVLGAMVRQAPGCSATRAEAIVRAFESPLGLMLAL 699
            + +L  KGV C TR L LGD +WIAR   +P  E+ L YIVERK   DL SSI DGR+ EQK RLK SG  + IY+VE  N     +    A+++A++S+Q   G+ + +  S+ D++D+L    R I  +  NT      SH  T     G++G            P      R G+      +   +TY  Y Q  AK  GS +   V   M+    G +A RA ++++ + +P  L+ A 
Sbjct:  719 EQTLTAKGVSCITRSLDLGDAIWIARSKSNPPQELFLDYIVERKRLDDLVSSIKDGRFTEQKLRLKRSGAEKLIYVVEEYNREEAERFGAQAIQTAMSSTQIIDGIFLKRTSSIDDTIDYLVSITRLIERIYRNTRLYIIPSHLITRQNYLGLKG----------ACPR-----RQGE------IAYVITYTLYNQLNAKN-GSASLHEVYLRMLMTIRGVNAERALSLMKIYPTPRSLLEAF 939          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig15147.3851.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7R8_9PHAE1.120e-15472.86ERCC4 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A836CKB8_9STRA4.170e-4442.50Restriction endonuclease type II-like protein n=1 ... [more]
A0A7S3XK47_HETAK2.830e-2835.74Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7R9UCP7_9STRA1.590e-2450.38Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A665VS24_ECHNA4.000e-2233.20MUS81 structure-specific endonuclease subunit n=3 ... [more]
A0A3B3HWT0_ORYLA5.060e-2133.06MUS81 structure-specific endonuclease subunit n=7 ... [more]
A0A067BND5_SAPPC6.110e-2136.63ERCC4 domain-containing protein n=1 Tax=Saprolegni... [more]
A0A3P9L8A6_ORYLA6.220e-2133.06MUS81 structure-specific endonuclease subunit n=5 ... [more]
UPI001ED821146.300e-2130.46crossover junction endonuclease MUS81 n=1 Tax=Scat... [more]
A0A1C7NCE9_9FUNG1.130e-2034.16Crossover junction endonuclease MUS81 n=1 Tax=Choa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig15147contigH-canaliculatus_F_contig15147:347..1891 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score478.8
Seed ortholog evalue2.2e-132
Seed eggNOG ortholog2880.D8LQM7
Preferred nameMus81
KEGG koko:K08991
KEGG Pathwayko03440,ko03460,map03440,map03460
GOsGO:0000003,GO:0000075,GO:0000077,GO:0000228,GO:0000278,GO:0000280,GO:0000712,GO:0000724,GO:0000725,GO:0000727,GO:0000793,GO:0000794,GO:0002164,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006302,GO:0006310,GO:0006312,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007093,GO:0007095,GO:0007127,GO:0007129,GO:0007131,GO:0007275,GO:0007346,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009791,GO:0009987,GO:0010389,GO:0010564,GO:0010948,GO:0010972,GO:0016043,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0019899,GO:0022402,GO:0022414,GO:0022607,GO:0031297,GO:0031570,GO:0031572,GO:0031573,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0035825,GO:0040019,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044773,GO:0044774,GO:0044818,GO:0045005,GO:0045132,GO:0045143,GO:0045786,GO:0045930,GO:0045995,GO:0046483,GO:0048256,GO:0048257,GO:0048285,GO:0048476,GO:0048518,GO:0048519,GO:0048523,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051026,GO:0051094,GO:0051239,GO:0051240,GO:0051276,GO:0051304,GO:0051307,GO:0051321,GO:0051716,GO:0051726,GO:0061982,GO:0065007,GO:0070013,GO:0070192,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0098813,GO:0140013,GO:0140097,GO:1901360,GO:1901576,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902749,GO:1902750,GO:1903046,GO:1903047,GO:2000026
EggNOG free text desc.resolution of meiotic recombination intermediates
EggNOG OGsCOG1948@1,KOG2379@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03400
Hectar predicted targeting categoryother localisation
Exons2
Model size1038
Cds size1038
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929256.3483286-CDS-H-canaliculatus_F_contig15147:346..12141622929256.3483286-CDS-H-canaliculatus_F_contig15147:346..1214Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig15147 347..1214 -
1696845738.8559918-CDS-H-canaliculatus_F_contig15147:346..12141696845738.8559918-CDS-H-canaliculatus_F_contig15147:346..1214Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig15147 347..1214 -
1622929256.3637142-CDS-H-canaliculatus_F_contig15147:1721..18911622929256.3637142-CDS-H-canaliculatus_F_contig15147:1721..1891Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig15147 1722..1891 -
1696845738.8676472-CDS-H-canaliculatus_F_contig15147:1721..18911696845738.8676472-CDS-H-canaliculatus_F_contig15147:1721..1891Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig15147 1722..1891 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig15147.3851.1prot_H-canaliculatus_F_contig15147.3851.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig15147 347..1891 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig15147.3851.1

>prot_H-canaliculatus_F_contig15147.3851.1 ID=prot_H-canaliculatus_F_contig15147.3851.1|Name=mRNA_H-canaliculatus_F_contig15147.3851.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=346bp
QSSLLQKGVRCETRQLPLGDMLWIARRTDDPTSEVLLGYIVERKTASDLA
SSIIDGRYDEQKRRLKLSGLRRRIYLVEGNLSHQSQLAPSALRSALASSQ
ACGGLAVVQCDSLRDSVDFLARTHRHIASLLENTCKSHAATGVEGGGGGE
VRGAGLWPETGSGARDGDTGGGAMLLPAMTYGEYAQGCAKRAGSTTARRV
LGAMVRQAPGCSATRAEAIVRAFESPLGLMLALEHAAGKGGGGGEDGVDS
DDVARMKKADDLLAGLVCRGGAGTNKLPQPLRRLLCRLFLAESVDGGVSG
GGAGGRPKQATDDHSNSIMSCDLLGRDPYCADGWDAEPMSQDDPY*
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mRNA from alignment at H-canaliculatus_F_contig15147:347..1891-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig15147.3851.1 ID=mRNA_H-canaliculatus_F_contig15147.3851.1|Name=mRNA_H-canaliculatus_F_contig15147.3851.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1545bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15147:347..1891- (Hapterophycus canaliculatus Oshoro5f female)
CAGTCCTCCTTGCTGCAGAAAGGGGTACGGTGCGAAACCAGGCAGCTCCC GCTGGGCGATATGCTCTGGATTGCGAGAAGGACTGACGACCCGACTTCGG AGGTCCTGCTGGGCTACATCGTAGAACGCAAGACGGCCTCGGATCTTGCT AGCAGCATCATTGATGGCCGGTAAGCCAAGCGATGGGGTTTTCCCCCTTC GCCCTACTTCCTTGTTCGTACTTTGTTAGGGCTGCCTGCGTGTCGGAATA AACGCACGGTTCATCAATGTTAGTGTTTCAGCGTGCGCTTTTCCAGCCAA ATTTACGTTGTGAGTTGTGCGCTGATTGTTGTTTTGGCTGCTGCTGCTGC TGCTGCTGCTGCTGCTGCTGCTGCTGCCGTCGCGTCAGCATGCATGCAAA TTGAGCACTCTTTCAGGCGATGGTTGCGTTGCCCACCCTTACATGCGCTG TGTTCATGCTGGGATCCATCCAGAGCCCAGAAATGAGGGATGCCCTGCTC GCTGCTGTGAACCCTCATCGACACCAACATCAATAAGTGTCAACTTGCGC CCGGTGCCTGAGCCGACCATCCAAAGTGCACATGCTCCCTTCTTATATGG TAGATCTTCATCCTCTCGAGGGTTCTTCGTGTCAGCTCTGCCCCTCCCTT CCTGCCCGCCTATCTGCGTCGCGTCAGGTATGACGAGCAAAAGAGGCGCC TCAAGCTTAGCGGACTCCGGCGCCGCATCTACCTCGTAGAGGGAAACCTC AGCCACCAGAGCCAGCTCGCCCCATCAGCTCTCCGAAGTGCCCTGGCGTC CTCTCAGGCCTGTGGAGGCCTGGCCGTGGTGCAGTGCGACAGCCTCCGCG ATAGCGTAGACTTTCTCGCGAGGACCCACCGGCACATCGCGTCCCTCCTC GAAAACACGTGCAAGTCTCATGCGGCCACCGGAGTGGAAGGAGGAGGAGG AGGAGAAGTGAGGGGTGCGGGTCTTTGGCCTGAGACTGGGAGCGGAGCCA GAGATGGCGATACAGGTGGTGGGGCGATGCTGCTGCCGGCGATGACTTAC GGGGAGTACGCCCAGGGATGCGCGAAGCGTGCAGGCTCTACGACAGCGCG GCGGGTGTTGGGAGCGATGGTGAGGCAGGCCCCTGGTTGCAGCGCGACAA GAGCCGAGGCGATCGTCCGAGCGTTCGAGTCGCCGCTGGGGTTGATGCTG GCCCTGGAGCACGCAGCGGGCAAGGGAGGTGGTGGTGGCGAGGATGGCGT CGACAGCGACGACGTTGCGAGAATGAAGAAAGCGGACGATTTGCTGGCCG GGTTGGTGTGTCGCGGGGGGGCAGGCACCAATAAGCTTCCGCAGCCTTTG AGACGACTGCTGTGTCGCCTTTTTTTGGCGGAGAGCGTTGACGGAGGCGT CAGCGGCGGTGGCGCGGGGGGGCGGCCAAAGCAGGCGACTGATGACCACA GCAACAGCATAATGAGTTGCGATTTGTTGGGGAGAGATCCGTATTGCGCT GATGGCTGGGATGCGGAGCCCATGAGTCAAGACGATCCTTACTAA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig15147:347..1891-

>mRNA_H-canaliculatus_F_contig15147.3851.1 ID=mRNA_H-canaliculatus_F_contig15147.3851.1|Name=mRNA_H-canaliculatus_F_contig15147.3851.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2076bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15147:347..1891- (Hapterophycus canaliculatus Oshoro5f female)
CAGTCCTCCTTGCTGCAGAAAGGGGTACGGTGCGAAACCAGGCAGCTCCC
GCTGGGCGATATGCTCTGGATTGCGAGAAGGACTGACGACCCGACTTCGG
AGGTCCTGCTGGGCTACATCGTAGAACGCAAGACGGCCTCGGATCTTGCT
AGCAGCATCATTGATGGCCGCAGTCCTCCTTGCTGCAGAAAGGGGTACGG
TGCGAAACCAGGCAGCTCCCGCTGGGCGATATGCTCTGGATTGCGAGAAG
GACTGACGACCCGACTTCGGAGGTCCTGCTGGGCTACATCGTAGAACGCA
AGACGGCCTCGGATCTTGCTAGCAGCATCATTGATGGCCGGTATGACGAG
CAAAAGAGGCGCCTCAAGCTTAGCGGACTCCGGCGCCGCATCTACCTCGT
AGAGGGAAACCTCAGCCACCAGAGCCAGCTCGCCCCATCAGCTCTCCGAA
GTGCCCTGGCGTCCTCTCAGGCCTGTGGAGGCCTGGCCGTGGTGCAGTGC
GACAGCCTCCGCGATAGCGTAGACTTTCTCGCGAGGACCCACCGGCACAT
CGCGTCCCTCCTCGAAAACACGTGCAAGTCTCATGCGGCCACCGGAGTGG
AAGGAGGAGGAGGAGGAGAAGTGAGGGGTGCGGGTCTTTGGCCTGAGACT
GGGAGCGGAGCCAGAGATGGCGATACAGGTGGTGGGGCGATGCTGCTGCC
GGCGATGACTTACGGGGAGTACGCCCAGGGATGCGCGAAGCGTGCAGGCT
CTACGACAGCGCGGCGGGTGTTGGGAGCGATGGTGAGGCAGGCCCCTGGT
TGCAGCGCGACAAGAGCCGAGGCGATCGTCCGAGCGTTCGAGTCGCCGCT
GGGGTTGATGCTGGCCCTGGAGCACGCAGCGGGCAAGGGAGGTGGTGGTG
GCGAGGATGGCGTCGACAGCGACGACGTTGCGAGAATGAAGAAAGCGGAC
GATTTGCTGGCCGGGTTGGTGTGTCGCGGGGGGGCAGGCACCAATAAGCT
TCCGCAGCCTTTGAGACGACTGCTGTGTCGCCTTTTTTTGGCGGAGAGCG
TTGACGGAGGCGTCAGCGGCGGTGGCGCGGGGGGGCGGCCAAAGCAGGCG
ACTGATGACCACAGCAACAGCATAATGAGTTGCGATTTGTTGGGGAGAGA
TCCGTATTGCGCTGATGGCTGGGATGCGGAGCCCATGAGTCAAGACGATC
CTTACTAAGTATGACGAGCAAAAGAGGCGCCTCAAGCTTAGCGGACTCCG
GCGCCGCATCTACCTCGTAGAGGGAAACCTCAGCCACCAGAGCCAGCTCG
CCCCATCAGCTCTCCGAAGTGCCCTGGCGTCCTCTCAGGCCTGTGGAGGC
CTGGCCGTGGTGCAGTGCGACAGCCTCCGCGATAGCGTAGACTTTCTCGC
GAGGACCCACCGGCACATCGCGTCCCTCCTCGAAAACACGTGCAAGTCTC
ATGCGGCCACCGGAGTGGAAGGAGGAGGAGGAGGAGAAGTGAGGGGTGCG
GGTCTTTGGCCTGAGACTGGGAGCGGAGCCAGAGATGGCGATACAGGTGG
TGGGGCGATGCTGCTGCCGGCGATGACTTACGGGGAGTACGCCCAGGGAT
GCGCGAAGCGTGCAGGCTCTACGACAGCGCGGCGGGTGTTGGGAGCGATG
GTGAGGCAGGCCCCTGGTTGCAGCGCGACAAGAGCCGAGGCGATCGTCCG
AGCGTTCGAGTCGCCGCTGGGGTTGATGCTGGCCCTGGAGCACGCAGCGG
GCAAGGGAGGTGGTGGTGGCGAGGATGGCGTCGACAGCGACGACGTTGCG
AGAATGAAGAAAGCGGACGATTTGCTGGCCGGGTTGGTGTGTCGCGGGGG
GGCAGGCACCAATAAGCTTCCGCAGCCTTTGAGACGACTGCTGTGTCGCC
TTTTTTTGGCGGAGAGCGTTGACGGAGGCGTCAGCGGCGGTGGCGCGGGG
GGGCGGCCAAAGCAGGCGACTGATGACCACAGCAACAGCATAATGAGTTG
CGATTTGTTGGGGAGAGATCCGTATTGCGCTGATGGCTGGGATGCGGAGC
CCATGAGTCAAGACGATCCTTACTAA
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