mRNA_H-canaliculatus_F_contig1508.3821.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1508.3821.1 vs. uniprot
Match: A0A6H5KJT8_9PHAE (Protein xylosyltransferase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT8_9PHAE) HSP 1 Score: 681 bits (1756), Expect = 3.990e-244 Identity = 323/396 (81.57%), Postives = 359/396 (90.66%), Query Frame = 1
Query: 1 KYTGWKLADQEFEAYVDPKKARVVFYIMVAGLQELPGLDALLRNVYHVDHFFLVHLDVKAAAHVREGVKRRILQVLDERGNGQVNIRLVDPATPITWGGFTMTLNAVHGITQALHWTTKWDYFINLSASDLPLLGTDEVAGILGEHKASNTSFIKGFKYEPSWEGYQFIDRREMFAEDQAVMRDTDTEKRWPWAILDAQKEKLTRPMPNLFTVHKGEFWVMLHRSMAEYVHKSPDNQARTLLAYFSGMIVSDEEFFQTVACNPHFPHATLRTHDDNLRFVNWWGDQASPAIVPPFRAVAAANSGAMFGRKFSSSTDEGRDGIRWIESYLADSSRSQARVDRVKRRLAARMTPEGKAVGFCGKAQEKKPPEAYYAVEGDEEKLPEEFQDLPPRRGGG 1188
KY+GWKLAD +F+ +VDP+KARVVFYIMVA LQELPGLDALLR +YHVDHFFLVHLDVKA+A R+GV+ I ++LDERGNG+ N+R VDPA P+TWGGFTMTLNAV+G+TQALHW TKWDYFINLSASDLPLL DE+AGILGEHKA NTSFI GFKYEPSWEGY+F+DRREMFAED+AVMRDT EKRWPWAILDAQKE L RPMPN+FTVHKGEFWVMLHRSMAEYVHKS DNQAR LL YFSGMIVSDEEFFQTVACNP FPH TLR H+DNLRFVNWWGDQASPAIVPPFRAVAAANSGA+FGRKFSSST+EGRDG+RW+ESYLA SSRS+ARVDRVKRRL +RM+P G+ VGFCGKA+E KPPEAY+AV+G+EE +P F+ PPRRGGG
Sbjct: 67 KYSGWKLADDDFKHHVDPQKARVVFYIMVANLQELPGLDALLRTLYHVDHFFLVHLDVKASALARQGVESGIERMLDERGNGERNVRFVDPAMPVTWGGFTMTLNAVYGLTQALHWNTKWDYFINLSASDLPLLRADEIAGILGEHKAGNTSFITGFKYEPSWEGYKFVDRREMFAEDEAVMRDTGREKRWPWAILDAQKEMLRRPMPNVFTVHKGEFWVMLHRSMAEYVHKSRDNQARMLLTYFSGMIVSDEEFFQTVACNPFFPHDTLRVHNDNLRFVNWWGDQASPAIVPPFRAVAAANSGALFGRKFSSSTEEGRDGVRWVESYLAASSRSKARVDRVKRRLESRMSPAGEPVGFCGKARENKPPEAYFAVQGEEEVVPPGFEPQPPRRGGG 462
BLAST of mRNA_H-canaliculatus_F_contig1508.3821.1 vs. uniprot
Match: D8LCA7_ECTSI (Protein xylosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCA7_ECTSI) HSP 1 Score: 546 bits (1407), Expect = 2.040e-193 Identity = 258/309 (83.50%), Postives = 281/309 (90.94%), Query Frame = 1
Query: 82 MVAGLQELPGLDALLRNVYHVDHFFLVHLDVKAAAHVREGVKRRILQVLDERGNGQVNIRLVDPATPITWGGFTMTLNAVHGITQALHWTTKWDYFINLSASDLPLLGTDEVAGILGEHKASNTSFIKGFKYEPSWEGYQFIDRREMFAEDQAVMRDTDTEKRWPWAILDAQKEKLTRPMPNLFTVHKGEFWVMLHRSMAEYVHKSPDNQARTLLAYFSGMIVSDEEFFQTVACNPHFPHATLRTHDDNLRFVNWWGDQASPAIVPPFRAVAAANSGAMFGRKFSSSTDEGRDGIRWIESYLADSSRSQ 1008
MVA LQELPGLDALLR +YHVDHFFLVHLDVKA+A R+GV+ RI +VLDERGNG+ N+R V PA PITWGGFTMTLNAV+G+TQALHW TKWDYFINLSASDLPLL DE+AGILGEHKA NTSFI GFKYEPSWEGY+F+DRREMFAED+AVMR+T EKRWPWAILDA KE L RPMPN+FTVHKGEFWVMLHRSMAEYVHKSPDNQAR LL Y SGM+VSDEEFFQTVACNP FPH TLR H+DNLRFVNWWGDQASPAIVP FRAVAAANSGA+FGRKFSSST+EGRDG+RW+ESYLA+SSR +
Sbjct: 1 MVANLQELPGLDALLRTLYHVDHFFLVHLDVKASAQARQGVESRIERVLDERGNGERNVRFVSPAMPITWGGFTMTLNAVYGLTQALHWNTKWDYFINLSASDLPLL-KDEIAGILGEHKAGNTSFITGFKYEPSWEGYKFVDRREMFAEDEAVMRNTGREKRWPWAILDAHKEMLRRPMPNIFTVHKGEFWVMLHRSMAEYVHKSPDNQARMLLTYSSGMMVSDEEFFQTVACNPFFPHDTLRVHNDNLRFVNWWGDQASPAIVPTFRAVAAANSGALFGRKFSSSTEEGRDGVRWVESYLAESSRGR 308
BLAST of mRNA_H-canaliculatus_F_contig1508.3821.1 vs. uniprot
Match: A0A835YZY2_9STRA (Core-2/I-branching enzyme-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZY2_9STRA) HSP 1 Score: 211 bits (536), Expect = 6.040e-61 Identity = 116/294 (39.46%), Postives = 172/294 (58.50%), Query Frame = 1
Query: 61 ARVVFYIMVAGLQELPGLDALLRNVYHVDHFFLVHLDVKAAAHVREGVKRRILQVLDERGNGQVNIRLVDPATPITWGGFTMTLNAVHGITQALHWTTKWDYFINLSASDLPLLGTDEVAGILGEHKASNTSFIKGFKYEPSWEGYQFIDRREMFAEDQAVMRDTDTEKRWPWAILDAQKEK--LTRPMPNLFTVHKGEFWVMLHRSMAEYVHKSPDNQARTLLAYFSGMIVSDEEFFQTVACNPHFPHATLRTHDDNLRFVNWWG-DQASPAIVPPFRAVAAANSGAMFGRKF 933
A+++F I ++G ++ L LLR ++H D+ +L+H+D KA A ++ I QV G NI+LVD ++WG F+M L A+HG++ A+ W+++WD++INLS +D+PLL DE+ +LG G P WE + DRR + +D+ + R + I A K + RP P+LF V+KGEFWV+LHRS+AEY+H SPDN AR++ Y + +SDE FFQTVAC+P P A+ +D+LRF+ W + PA + A SGA+F RKF
Sbjct: 42 AKILFSITISGSRDALALSTLLRALWHQDNLYLLHVDAKALASDMAAIRNVIKQVA---GADPKNIKLVDNPVQVSWGRFSMLLTALHGLSSAIGWSSQWDFWINLSPADMPLLTADEMRLVLGALSRDRPVSFMGCT-RPDWEQVR-PDRRHTYMDDEGLYRSLPRPRGRLSVIQHAPKPMRGVARPPPDLFDVYKGEFWVVLHRSLAEYIHHSPDNVARSVYLYLAATYISDELFFQTVACHPKLP-ASFHIINDSLRFIRWPPKSRGHPATIDDVLLEEALASGALFARKF 329
BLAST of mRNA_H-canaliculatus_F_contig1508.3821.1 vs. uniprot
Match: A0A6H5KBR7_9PHAE (GT14 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBR7_9PHAE) HSP 1 Score: 206 bits (525), Expect = 2.300e-58 Identity = 130/372 (34.95%), Postives = 185/372 (49.73%), Query Frame = 1
Query: 55 KKARVVFYIMVAGLQELPGLDALLRNVYHVDHFFLVHLDVKAAAHVREGVKRRILQVLDERGNGQVNIRLVDPATPITWGGFTMTLNAVHGITQALHWTTKWDYFINLSASDLPLLGTDEVAGILGEHKASNTSFIKGFK---YEPSWEGYQFIDRREMFAEDQAVMRDTDTEKRWPWAILDAQKEKLTRPMPNLFTVHKGEFWVMLHRSMAEYVHKSPDNQARTLLAYFSGMIVSDEEFFQTVACNPH---FPHATLRTHDDNLRFVNW-------WGDQAS----------PAIVPPFRAVAAANSGAMFGRKFSSSTDEGRDGIRWIESY------LADSSRSQARVDRVKRRLAARMTPEGKAVGFCG 1083
++AR+ F IM +G ++ L LL +YH D+ +LVH+D KA E ++ + N +L++PA ++WGGF++TL ++GI AL W WDYFINLS SD P++ DE+ LGEH + SF+ G +E W+GY EDQ + R D L ++ R P F ++KGEFW HRS EY SPDN ARTL AYF+G +SDE +FQT+AC+P FP H DN RF +W G + P + + A++SGA+F RKF D ++ + Y L + RS AR++R + R R + +G FCG
Sbjct: 87 RRARLAFLIMSSG-DDIAKLSVLLPEIYHPDNIYLVHVDAKAPREQTEKIREVVRANFPAADGRPSNGKLLEPAGIVSWGGFSITLACLYGIAAALLWDEGWDYFINLSTSDFPVVTQDEMTLFLGEHADAGVSFMDGEPMTGFEKRWQGY---------TEDQGLHRRADHHTSVAMQTLG----RIQRAYPQRFRLYKGEFWGAFHRSFCEYASWSPDNVARTLSAYFTGYRISDESYFQTLACHPEGKVFP-----IHGDNFRFTSWNEHHRDSHGRKVDANGHILIHPEPLAIASIDKIKASSSGALFARKF--------DYVKSYQVYQAMQDDLRNRDRSAARLERARARFGLRASDKGGRDDFCG 431
BLAST of mRNA_H-canaliculatus_F_contig1508.3821.1 vs. uniprot
Match: D8LDZ1_ECTSI (Xylosyltransferase, family GT14 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ1_ECTSI) HSP 1 Score: 204 bits (519), Expect = 6.310e-57 Identity = 130/363 (35.81%), Postives = 183/363 (50.41%), Query Frame = 1
Query: 55 KKARVVFYIMVAGLQELPGLDALLRNVYHVDHFFLVHLDVKAAAHVREGVKRRILQVLDERGNGQVNIRLVDPATPITWGGFTMTLNAVHGITQALHWTTKWDYFINLSASDLPLLGTDEVAGILGEHKASNTSFIKG---FKYEPSWEGYQFIDRREMFAEDQAVMRDTDTEKRWPWAILDAQKEKLTRPMPNLFTVHKGEFWVMLHRSMAEYVHKSPDNQARTLLAYFSGMIVSDEEFFQTVACNPH---FPHATLRTHDDNLRFVNWWGDQASP-----------AIVPPFRAVAAAN----SGAMFGRKFSSSTDEGRDGIRWIESYLADSSRSQARVDRVKRRLAARMTPEGKAVGFC 1080
++AR+ F IM +G ++ L LL +YH D+ +LVH+D KA E ++ + N RL++PA ++WGGF++TL ++GI AL W WDYFINLS SD P++ DE+ LGEH + SF+ G +E W+GY EDQ + R D L ++ R P F ++KGEFW HRS EY SPDN ARTL AYF+G +SDE +FQT+AC+P FP H DN RF +W I P A+A+ + SGA+F RKF + + + ++ L + RS AR+DR + R R + +G FC
Sbjct: 147 RRARLAFLIMSSG-DDIAKLSVLLPEIYHPDNIYLVHVDAKAPREQTEKIREVVRANFPAADGRPPNGRLLEPAGIVSWGGFSITLACLYGIAAALLWDEGWDYFINLSTSDFPVVTQDEMTLFLGEHADAGVSFMDGELMTGFEKRWQGY---------TEDQGLQRRADHHTSVAMQTLG----RIQRAYPQRFRLYKGEFWGAFHRSFCEYASWSPDNVARTLSAYFTGYRISDESYFQTLACHPEGKVFP-----IHGDNFRFTSWNEHHRDSHGRKIDANGHILIHPEPLAIASVDKIMSSGALFARKFDYA--KSYRVYQAMQDDLRNRDRSAARLDRARARFGLRASDKGGRDDFC 488
BLAST of mRNA_H-canaliculatus_F_contig1508.3821.1 vs. uniprot
Match: A0A6H5L1U8_9PHAE (GT14 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1U8_9PHAE) HSP 1 Score: 199 bits (506), Expect = 2.560e-55 Identity = 124/337 (36.80%), Postives = 183/337 (54.30%), Query Frame = 1
Query: 13 WKLADQEFEAYVDP-----------KKARVVFYIMVAGLQELPGLDALLRNV---YHVDHFFLVHLDVKAAAHVREGVKRRILQVLDERGNGQVNIRLVDPATPITWGGFTMTLNAVHGITQALHWTTKWDYFINLSASDLPLLGTDEVAGILGEHKASNTSFIKGFKYEPSWEGYQFIDRREMFAEDQAVMRDTDTEKRWPWAILDAQKE----KLTRPMPNLFTVHKGEFWVMLHRSMAEYVHKSPDNQARTLLAYFSGMIVSDEEFFQTVACNPHFPHATLRTHDDNLRFVNW-WGDQASPAIVPPF-----RAVAAANSGAMFGRKFSSSTDE 951
W+ ++F+A D + AR F IM G ++ + L RNV Y +FFL+H+D K++ R V R +L LD N R+++PA ++WGG+++TL A+ G++ + W+ WDYFINLSA+D PLL + E++ +G S +F+ G +R E++ +DQ + R +T +R L ++ ++ RP+PNLFT+ KGEFWV LHR EYVH+SPDN AR+L AYF+ +SDE FFQT C+P P A H+DNLR VNW + D + ++ P SGA+F RKF T +
Sbjct: 101 WRDPRRDFQAEYDEVIAAVPGLSGTRPARFAFLIMAHGPADV---ELLRRNVPWLYSPLNFFLIHMDRKSSDKDRADV-RELLHGLD-------NARILEPAQSVSWGGYSITLTALFGLSTLVEWSRDWDYFINLSATDFPLLSSAEMSVAMGSFVESRMNFVTGSAMMEQ-------NRAELYVDDQGLYRVNET-RRAAQPFLQRRQSGPPVRVERPLPNLFTLFKGEFWVALHRDFCEYVHESPDNVARSLQAYFAKFRISDESFFQTTLCHPAAPSA-FPIHNDNLRLVNWPYFDPETEWVLHPDPVQSKHVTKLMKSGALFARKFELGTSD 417
BLAST of mRNA_H-canaliculatus_F_contig1508.3821.1 vs. uniprot
Match: A0A6H5L6Q9_9PHAE (Protein xylosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6Q9_9PHAE) HSP 1 Score: 194 bits (493), Expect = 1.360e-52 Identity = 131/371 (35.31%), Postives = 195/371 (52.56%), Query Frame = 1
Query: 55 KKARVVFYIMVAGLQELPGLDALLRNVYHVDHFFLVHLDVKAAAHVREGVKRRILQVLDERGNGQVNIRLVDPATPITWGGFTMTLNAVHGITQALHWTTKWDYFINLSASDLPLLGTDEVAGILGEHKASNTSFIKGFKYEPSWEGYQFIDRREMFAEDQAVMRDTDTEKRWPWAILDAQKEKLTRPMPNLFTVHKGEFWVMLHRSMAEYVHKSPDNQARTLLAYFSGMIVSDEEFFQTVACNPHFPH--------------ATLR---THDDNLRFVNWWGDQASPAIVPPFRAVAAAN--------SGAMFGRKFSSSTDEGRDGIRWIESY-LADSSRSQARVDRVKRRLAARMTPEGKAVG---FC 1080
K+AR+ + IM +G +EL LL+ +Y ++F+LVHLD K + ++R ++E N +R+++PA ++WGG+T+TL A+ GI + W +WD+FINLSASD PLL E+ +LG++ +F+ G EP E +R E+ +DQ + R+ + K L K +L P ++FTV+KGEFWV+LHRS +Y+ SPDN AR+L AYFS +SDE +FQTV C+P P AT R + DNLRFV+W ++ P A+ SGA+F RKF + + E+Y + + S S+ R+ R A R+ P G FC
Sbjct: 172 KRARIGYLIMSSGTEELHKTKRLLKAIYDPNNFYLVHLDRKD----KHSIRRDFENFIEEWDN----VRMLEPALDVSWGGYTITLTAIFGICTMVQWNDEWDFFINLSASDFPLLPQSELTTVLGKYADVGMNFVSG---EPLNER----NRAEVLIDDQGLYREKQSSK--AGRPLKVGKARLP-PSKSMFTVYKGEFWVILHRSFCKYLEASPDNVARSLQAYFSKFRISDESYFQTVLCHPLAPSFLVQPAEKVPIVCLATKRLSCSFTDNLRFVSWPDVIEGHYVLHPDPITGGASGNVNVAMDSGALFARKFDTKVSQ--------EAYTVLEKSLSEPNPGRLAR-AANRLNPAAAVTGRKKFC 515
BLAST of mRNA_H-canaliculatus_F_contig1508.3821.1 vs. uniprot
Match: A0A843XIM2_COLES (Uncharacterized protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843XIM2_COLES) HSP 1 Score: 119 bits (298), Expect = 2.900e-26 Identity = 93/298 (31.21%), Postives = 143/298 (47.99%), Query Frame = 1
Query: 52 PKKARVVFYIMVAGLQELPGLDALLRNVYHVDHFFLVHLDVKAAAHVREGVKRRILQ--VLDERGNGQVNIRLVDPATPITWGGFTMTLNAVHGITQALHWTTKWDYFINLSASDLPLLGTDEVAGILGEHKASNTSFIKGFKYEPSWEGYQFIDRREMFAEDQAVMRDTDTEKRWPWAILDAQKEKLTRPMPNLFTVHKGEFWVMLHRSMAEYVHKSPDNQARTLLAYFSGMIVSDEEFFQTVACNPH-FPHATLRTHDDNLRFVNWWGD-QASPAIVPPFRAVAAANSGAMFGRKF 933
P++ + Y++ + L LL+ VYH +++ VHLD+ A A R G+ R + V GN +R+V A +++ G TM +HG L +WD+FINLSA+D PL+ D+V I + + +FI+ + W+ YQ R D A+ T+ W KEK R +P+ F + G W++L RS E+ DN RTLL Y++ + S E +F TV CN F + T+ +++LRF+ W + P + SGA F RKF
Sbjct: 55 PREPPRLAYLISGTRGDGTSLRRLLQAVYHPWNYYAVHLDISAPAEERGGLSRYVASEPVFSAYGN----VRVVGEADVVSYKGPTMVSCTLHGAAVLLREAERWDWFINLSAADYPLMPQDDVIHIFS-YLPRDLNFIEHTS-KIGWKEYQ---RARPIIVDPALYNLKKTDVFWV-------KEK--RSLPSSFKLFVGSSWMVLTRSFLEFCIWGWDNLPRTLLMYYTNFLSSSEGYFHTVLCNSQDFQNTTI---NNDLRFMTWDNPPRQHPITLGSNHFDLMVESGAPFARKF 331
BLAST of mRNA_H-canaliculatus_F_contig1508.3821.1 vs. uniprot
Match: M1CCE2_SOLTU (Glycosyltransferase family 14 protein n=5 Tax=Solanum TaxID=4107 RepID=M1CCE2_SOLTU) HSP 1 Score: 118 bits (295), Expect = 5.160e-26 Identity = 90/289 (31.14%), Postives = 139/289 (48.10%), Query Frame = 1
Query: 76 YIMVAGLQELPGLDALLRNVYHVDHFFLVHLDVKAAAHVREGVKRRILQ--VLDERGNGQVNIRLVDPATPITWGGFTMTLNAVHGITQALHWTTKWDYFINLSASDLPLLGTDEVAGILGEHKASNTSFIKGFKYEPSWEGYQFIDRREMFAEDQAVMRDTDTEKRWPWAILDAQKEKLTRPMPNLFTVHKGEFWVMLHRSMAEYVHKSPDNQARTLLAYFSGMIVSDEEFFQTVACNPHFPHATLRTHDDNLRFVNW-WGDQASPAIVPPFRAVAAANSGAMFGRKF 933
Y++ EL L L+++YH ++++VHLD+K+AA R + RI V + GN + ++ A +T+ G TM N +H + L T WD+FINLSASD PLL D++ + K + +FI+ S ++ +R D + ++T ++ W R +P F + G W +L R+ EY DN RTLL Y+S + S E +FQTV CN +T+ HD L +++W + P I+ SGA F RKF
Sbjct: 44 YLISGSKGELDQLWRTLKSIYHPWNYYIVHLDLKSAAEERLELASRIANEPVFAKIGN----VHMITKANMVTYRGPTMVSNTLHAASILLKKYTDWDWFINLSASDYPLLTQDDLLYAFSQLKR-DLNFIE----HTSRLRWKESERAMPLIIDPGLYQNTKSDIFWVAP---------RRTLPTAFKLFTGSAWTVLSRAFIEYCIWGWDNLPRTLLMYYSNFVSSPEGYFQTVICNAPEFSSTVINHD--LHYISWDVPPKQHPHILSLNDIGQMIASGAAFARKF 312
BLAST of mRNA_H-canaliculatus_F_contig1508.3821.1 vs. uniprot
Match: A0A1J3DST7_NOCCA (Xylosyltransferase 2 n=3 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3DST7_NOCCA) HSP 1 Score: 118 bits (296), Expect = 6.420e-26 Identity = 87/287 (30.31%), Postives = 135/287 (47.04%), Query Frame = 1
Query: 76 YIMVAGLQELPGLDALLRNVYHVDHFFLVHLDVKAAAHVREGVKRRILQVLDERGNGQVNIRLVDPATPITWGGFTMTLNAVHGITQALHWTTKWDYFINLSASDLPLLGTDEVAGILGEHKASNTSFIKGFKYEPSWEGYQFIDRREMFAEDQAVMRDTDTEKRWPWAILDAQKEKLTRPMPNLFTVHKGEFWVMLHRSMAEYVHKSPDNQARTLLAYFSGMIVSDEEFFQTVACNPHFPHATLRTHDDNLRFVNWWGD-QASPAIVPPFRAVAAANSGAMFGRKF 933
Y++ +L L LLR +YH + ++VHLD+++ + R + RR+ + D + N+ ++ A +T+ G TM N +HG L + WD+FINLSASD PL+ D++ E N +FI S G++ R + D + ++ W R MP F + G W++L RS EY DN RTLL Y++ I S E +F TV CN P + + + +LR+++W Q P + SGA+F RKF
Sbjct: 82 YLVSGSSGDLESLWRLLRAIYHPRNQYVVHLDLESPSEERLELARRVKE--DPVYSDVGNVFMITKANLVTYRGPTMVANTLHGCAILLKQSKDWDWFINLSASDYPLVTQDDLIHTFSELDR-NLNFID----HTSKLGWKDDKRAKPLIIDPGLYSTKKSDVFWVTP---------RRTMPTAFKLFTGSAWMVLSRSFVEYCIWGWDNLPRTLLMYYTNFISSSEGYFHTVICNA--PEYSTKVVNHDLRYISWDDPPQQHPLTLSINDTEKMIASGAVFARKF 350 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1508.3821.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1508.3821.1 >prot_H-canaliculatus_F_contig1508.3821.1 ID=prot_H-canaliculatus_F_contig1508.3821.1|Name=mRNA_H-canaliculatus_F_contig1508.3821.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=413bp KYTGWKLADQEFEAYVDPKKARVVFYIMVAGLQELPGLDALLRNVYHVDHback to top mRNA from alignment at H-canaliculatus_F_contig1508:10328..16214- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1508.3821.1 ID=mRNA_H-canaliculatus_F_contig1508.3821.1|Name=mRNA_H-canaliculatus_F_contig1508.3821.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5887bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1508:10328..16214- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1508:10328..16214- >mRNA_H-canaliculatus_F_contig1508.3821.1 ID=mRNA_H-canaliculatus_F_contig1508.3821.1|Name=mRNA_H-canaliculatus_F_contig1508.3821.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2478bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1508:10328..16214- (Hapterophycus canaliculatus Oshoro5f female)back to top |