mRNA_H-canaliculatus_F_contig1505.3796.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1505.3796.1 vs. uniprot
Match: A0A6H5KGP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGP4_9PHAE) HSP 1 Score: 235 bits (599), Expect = 6.860e-77 Identity = 120/151 (79.47%), Postives = 133/151 (88.08%), Query Frame = 1
Query: 1 PTGDEVAVKPGRDGFLYGGPDQPITKLVLIAAGVGVVPMIQVVNELLTSSSSKSSIASASVLWLNEKNEDFALYPELEKAFFRNHRKLDVSCIVERDLFGSHLEANANVREAAPEFTLGTLTAVAGPDFFTRKVTDFLLRKGYPEETIIKL 453
P GDE+AVKPGR +YGG +QPIT LVL+A GVGVVPMIQ+VNELL SSS SS+ASASV+WLNEK EDFALY ELEKAFFRNHRKLDVSCIVERDLFGSHLEANANV A+PEF +GTL AVAGPDFFTRKVTD+L+R+GYPE+ II L
Sbjct: 30 PLGDEIAVKPGRARLVYGGANQPITDLVLVANGVGVVPMIQMVNELLPSSS--SSVASASVVWLNEKAEDFALYSELEKAFFRNHRKLDVSCIVERDLFGSHLEANANVNAASPEFKIGTLAAVAGPDFFTRKVTDYLVRRGYPEDAIISL 178
BLAST of mRNA_H-canaliculatus_F_contig1505.3796.1 vs. uniprot
Match: D7FMW3_ECTSI (Cytochrome b5 reductase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW3_ECTSI) HSP 1 Score: 237 bits (605), Expect = 2.080e-74 Identity = 121/151 (80.13%), Postives = 134/151 (88.74%), Query Frame = 1
Query: 1 PTGDEVAVKPGRDGFLYGGPDQPITKLVLIAAGVGVVPMIQVVNELLTSSSSKSSIASASVLWLNEKNEDFALYPELEKAFFRNHRKLDVSCIVERDLFGSHLEANANVREAAPEFTLGTLTAVAGPDFFTRKVTDFLLRKGYPEETIIKL 453
P GDE+AVKPGR G +YGG +QPIT LVL+A GVGVVPMIQ+VNELL SSS SS+ASASV+WLNEK EDFALY ELEKAFFRNHRKLDVSCIVERDLFGSHLEANANV A+PEF +GTL AVAGPDFFTRKVTD+L+R+GYPE+ II L
Sbjct: 286 PLGDEIAVKPGRAGLVYGGANQPITDLVLVANGVGVVPMIQMVNELLPSSS--SSVASASVVWLNEKAEDFALYSELEKAFFRNHRKLDVSCIVERDLFGSHLEANANVNAASPEFKIGTLAAVAGPDFFTRKVTDYLVRRGYPEDAIIGL 434
BLAST of mRNA_H-canaliculatus_F_contig1505.3796.1 vs. uniprot
Match: A0A836CM13_9STRA (Cytochrome b5 reductase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM13_9STRA) HSP 1 Score: 179 bits (455), Expect = 7.370e-53 Identity = 91/147 (61.90%), Postives = 112/147 (76.19%), Query Frame = 1
Query: 7 GDEVAVKPGRDGFLYGGPDQPITKLVLIAAGVGVVPMIQVVNELLTSSSSKSSIASASVLWLNEKNEDFALYPELEKAFFRNHRKLDVSCIVERDLFGSHLEANANVREAAPEFTLGTLTAVAGPDFFTRKVTDFLLRKGYPEETII 447
GDEVA +PGR Y GP PIT +VLIA G+GVVPM+Q+V ELL + +SS+ +ASV+WLNE EDFALY ELE+AF++ HRKLDV+CI+ERDLFG L N VREA P F +GTL V+GPDFF KV D+L+R+GYP+E II
Sbjct: 202 GDEVAARPGRAMLQYRGPYAPITDVVLIACGLGVVPMLQLVRELLPAR--ESSVRAASVVWLNEAAEDFALYGELERAFYKYHRKLDVACIIERDLFGHALAGNRRVREAVPAFRIGTLAVVSGPDFFVAKVRDYLVRQGYPDEVII 346
BLAST of mRNA_H-canaliculatus_F_contig1505.3796.1 vs. uniprot
Match: K0RP22_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RP22_THAOC) HSP 1 Score: 114 bits (285), Expect = 3.370e-27 Identity = 59/150 (39.33%), Postives = 88/150 (58.67%), Query Frame = 1
Query: 7 GDEVAVKPGRDGFLYGGPDQPITKLVLIAAGVGVVPMIQVVNELLTSSSSKSSIASASVLWLNEKNEDFAL-YPELEKAFFRNHRKLDVSCIVERDLFGSHLEANANVREAAPEFTLGTLTAVAGPDFFTRKVTDFLLRKGYPEETIIKL 453
GDEVA+KPG+ YGG P+T +V + +G+G+VP++ + TS SS+ +SV+W+N+K +DF L +LE + + KL VSCI++ LE N V EA P F GT+ V+GP F K +L+++GYP+ I L
Sbjct: 272 GDEVAIKPGKSHLAYGGQHVPVTDMVYLTSGLGIVPILDQIRA--TSPKGSSSVKVSSVIWMNDKRDDFDLAMDDLEAEYMKYSTKLAVSCIMDDSASSGTLEGNREVEEAVPYFNPGTMAVVSGPKRFADKAEGYLMKRGYPKNCICVL 419
BLAST of mRNA_H-canaliculatus_F_contig1505.3796.1 vs. uniprot
Match: B7FWJ3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FWJ3_PHATC) HSP 1 Score: 114 bits (284), Expect = 5.070e-27 Identity = 62/151 (41.06%), Postives = 90/151 (59.60%), Query Frame = 1
Query: 4 TGDEVAVKPGRDGFLYGGPDQPITKLVLIAAGVGVVPMIQVVNELLTSSSSKSSIASASVLWLNEKNEDFALYPEL-EKAFFRNHRKLDVSCIVERDLFGSHLEANANVREAAPEFTLGTLTAVAGPDFFTRKVTDFLLRKGYPEETIIKL 453
GDE+A+KPG Y G P+T +V IA G G+VP++ V +L + S SS+ S SV+W+NE+ +DF + EL EK +++ +KL VSC+V+ + L N V A P+FT GT+ +AGP +K FL +GYP +TI L
Sbjct: 279 VGDEIALKPGPIKLSYRGQYLPVTGMVYIACGTGIVPVLDQVRAVLPADS--SSVTSVSVVWINEEAKDFDVTAELLEKEYYKYSKKLAVSCVVDNTMQRQSLGDNTEVHAAVPDFTQGTMAVIAGPSDMAKKAIAFLENRGYPRDTICVL 427
BLAST of mRNA_H-canaliculatus_F_contig1505.3796.1 vs. uniprot
Match: B8CAB2_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAB2_THAPS) HSP 1 Score: 112 bits (280), Expect = 2.270e-26 Identity = 62/150 (41.33%), Postives = 91/150 (60.67%), Query Frame = 1
Query: 7 GDEVAVKPGRDGFLYGGPDQPITKLVLIAAGVGVVPMIQVVNELLTSSSSKSSIASASVLWLNEKNEDFAL-YPELEKAFFRNHRKLDVSCIVERDLFGSHLEANANVREAAPEFTLGTLTAVAGPDFFTRKVTDFLLRKGYPEETIIKL 453
GDEVA+KPG+ Y G P+T +V IA+G+G+VP++ V + + SS+ SV+W+N++ DF L ELE + + KL VSCI++ D+ + +E NA V EA P F GT+ ++GP F+ K +L+RKGYPE I L
Sbjct: 298 GDEVALKPGKTTLEYRGERVPVTDMVYIASGLGIVPIVDQVKAITPKGT--SSVKVTSVVWINDQRSDFDLAMDELESEYTKYSTKLAVSCIMD-DVMKNPMEGNAEVEEAVPYFNAGTMAVISGPKRFSEKAKAYLMRKGYPENCICVL 444
BLAST of mRNA_H-canaliculatus_F_contig1505.3796.1 vs. uniprot
Match: A0A7S2A766_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A766_9STRA) HSP 1 Score: 105 bits (262), Expect = 9.410e-24 Identity = 59/150 (39.33%), Postives = 91/150 (60.67%), Query Frame = 1
Query: 7 GDEVAVKPGRDGFLYGGPDQPITKLVLIAAGVGVVPMIQVVNELLTSSSSKSSIASASVLWLNEKNEDFAL-YPELEKAFFRNHRKLDVSCIVERDLFGSHLEANANVREAAPEFTLGTLTAVAGPDFFTRKVTDFLLRKGYPEETIIKL 453
GDE+A+KPG Y G P+T +V +A+GVG+VP++ V +L S S SS+ S++W+N +DF + ELE+ +F+ + KL VSCI E ++ LE N + EA P+F GT+ ++GP F+ K +L +GYPE+ + L
Sbjct: 321 GDEIALKPGVSTLNYRGQYLPVTDIVYVASGVGIVPILDQVKAVLPSGS--SSVKGVSLVWINGDGKDFDVAINELEEEYFKYNTKLAVSCIGE-NVRKKALEENEEIEEAVPDFNPGTMAVISGPRAFSEKAKAYLKNRGYPEDCLCVL 467
BLAST of mRNA_H-canaliculatus_F_contig1505.3796.1 vs. uniprot
Match: A0A7S2XRE5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XRE5_9STRA) HSP 1 Score: 103 bits (257), Expect = 6.020e-23 Identity = 60/155 (38.71%), Postives = 90/155 (58.06%), Query Frame = 1
Query: 7 GDEVAVKPGRDGFLYGGPDQPITKLVLIAAGVGVVPMIQVVNELLTSSSSKSSIASASVLWLNEKNEDFALYPE-LEKAFFRNHRKLDVSCIVERDLFGSHLEA-----NANVREAAPEFTLGTLTAVAGPDFFTRKVTDFLLRKGYPEETIIKL 453
GDE+A++PG Y G P+T +V +A+G G+VP+++ V +L S KSS+ + SV+W+N DF + + LEK +F+ +KL VSC+VE G EA N + EA P F GT+ ++GP F K +L+ +GYPE+ I L
Sbjct: 364 GDEIAIQPGPQTLHYRGQYLPVTDMVYMASGPGIVPIVEQVRAVLPSG--KSSVKAVSVVWINHNAHDFDVALDALEKEYFKYSKKLLVSCLVEPKWNGKKSEAPRMDQNDEINEAVPNFNPGTMAVLSGPRRFADKAKIYLISRGYPEDCICVL 516
BLAST of mRNA_H-canaliculatus_F_contig1505.3796.1 vs. uniprot
Match: A0A4D9DFZ6_9STRA (FAD_binding_6 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DFZ6_9STRA) HSP 1 Score: 100 bits (248), Expect = 6.370e-22 Identity = 53/129 (41.09%), Postives = 81/129 (62.79%), Query Frame = 1
Query: 67 PITKLVLIAAGVGVVPMIQVVNELLTSSSSKSSIASASVLWLNEKNEDFALYPELEKAFFRNHRKLDVSCIVERDLFGSHLEANANVREAAPEFTLGTLTAVAGPDFFTRKVTDFLLRKGYPEETIIKL 453
PI KL++I + +G+VP +Q +N LL S+ S + A+V+W+NE+ + + L +L+ F+R + KLDV + ERDLF L N R + P + TL VAGP++FT KV D+L + GY E+ I+ L
Sbjct: 299 PIHKLLIIVSKLGIVPALQFLNALLPSAGGYS-VDFANVVWVNERQDQYILQNDLQDLFYRYNSKLDVYTVAERDLFMGDLGHNPQFRASIPPPSKETLVLVAGPEYFTAKVVDYLTKSGYTEDVIVTL 426
BLAST of mRNA_H-canaliculatus_F_contig1505.3796.1 vs. uniprot
Match: A0A7S2FHA9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FHA9_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 2.090e-21 Identity = 56/150 (37.33%), Postives = 90/150 (60.00%), Query Frame = 1
Query: 7 GDEVAVKPGRDGFLYGGPDQPITKLVLIAAGVGVVPMIQVVNELLTSSSSKSSIASASVLWLNEKNEDFALYPELEKAFFRNHRKLDVSCIVERDLFGSHLEANANVREAAPE-FTLGTLTAVAGPDFFTRKVTDFLLRKGYPEETIIKL 453
G+++A KPG + Y G PI + IA+G+G+VP + ++NELL S + SS+ +A+++W+NE DF Y ++E +++ +KLDVSC+++ D FGS L N + P+ + G + VAGP+ F V L K +PE I+ L
Sbjct: 313 GEQIAAKPGDERLTYDG-YLPIDDVHCIASGLGIVPALGLLNELLPSRA--SSVETANLVWVNEDEGDFVNYVDMENVWYKFSKKLDVSCVLDNDTFGSELWENEAFIASVPDSYVEGMMIVVAGPENFQLNVAKELAAKDFPEGAIVCL 459 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1505.3796.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1505.3796.1 >prot_H-canaliculatus_F_contig1505.3796.1 ID=prot_H-canaliculatus_F_contig1505.3796.1|Name=mRNA_H-canaliculatus_F_contig1505.3796.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=152bp PTGDEVAVKPGRDGFLYGGPDQPITKLVLIAAGVGVVPMIQVVNELLTSSback to top mRNA from alignment at H-canaliculatus_F_contig1505:122..1533+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1505.3796.1 ID=mRNA_H-canaliculatus_F_contig1505.3796.1|Name=mRNA_H-canaliculatus_F_contig1505.3796.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1412bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1505:122..1533+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1505:122..1533+ >mRNA_H-canaliculatus_F_contig1505.3796.1 ID=mRNA_H-canaliculatus_F_contig1505.3796.1|Name=mRNA_H-canaliculatus_F_contig1505.3796.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=912bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1505:122..1533+ (Hapterophycus canaliculatus Oshoro5f female)back to top |