mRNA_H-canaliculatus_F_contig150.3769.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig150.3769.1
Unique NamemRNA_H-canaliculatus_F_contig150.3769.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig150.3769.1 vs. uniprot
Match: A0A6H5KCF8_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCF8_9PHAE)

HSP 1 Score: 530 bits (1365), Expect = 3.870e-170
Identity = 333/632 (52.69%), Postives = 390/632 (61.71%), Query Frame = 2 
Query:   41 MGAHRRRFVRQRNTANRRRGTKTSDVASLESGDGSC----SLGS-WDSAHACDARTASPSPRSDLAPGTLIRRPAVSCDGDIQRVDREKGGNVKALNSGTNENLALPSYHPDAACAELTGYAGKLSSSHEAALGGLRQWLARDSVDLTPLLGDGRVY-----PPEEEDLALLRFLRQNAWDVELTRAQLEATLSWRVESGVAAAARTEPWELSKCASPETFEQLCRAHYPHYTLGTDRVGRPILVQKYGNFDISKLQEYTTLHGLLLYHAWEQERNAELLRRATARTGYLVETYAMIMDLGGMSMGHVSRDFLWLLREISEIDRKNYPGRGGDIYVINTPPLFGLVWQGIRGLLATQASVHVFGKERDWKRALAELMDPAVLPLEYGGAAPSLASTPLLPAVHCALQRVAPAALPLPAVGGAGCG---------------KETDAAAHAMCEEDATASSMSSILRCFSAGSGDGPCGSLEGKSHYGXXXXXXXXS-----PVMSGRRLGXXXXXXVGRSLSFTGAEKAGEGAG--------GGSGIVAPCKAFPKEINGCGLTNGDNPSTSKTPARA-LPPRRPFSSGTPVFDNGGRDYTQPRGITPRAPPAEAAASVVALPVSDDPRVVVS 1819
            MGAHRRR +RQR    R+R  K+ D  SLE GD  C    SLGS W+           P+ R  L+ GTLIR   V C                +  +       +P YH  AACAE+ GYA +LS SHEAALGGLRQWL R+SV+++PLLGD  +      PPEEEDL LLRFLR NAWDVELTRAQLEA+LSWR+E+GVA+ AR EPWE+S CAS E FE+LCR HYPHYT+GTDR GRPILVQKYGNFD SKLQE+TTL GLL YHAWEQE NA+LLRRA+ARTGYLVETYA+IMD  GMSMG V+RDFLWLLR++SE+DR +YPGRGG I+VINTPPLFGL WQGIRG L TQA+VH+FG E++WK ALAE +DPAVLPL+YGG AP LA TPLLPA H AL R  PA      VG A                  +E +AA    CE D TA SMS++LR FS G GDG   +LE +S                 PV+  R +        G S    G ++A  G G        G  G V P K  P+E+ G G+TN D+  T+K   R   P  RP S G     +   D     G       A AAAS++ LP SDDPR   S
Sbjct:    1 MGAHRRRILRQRGA--RKRHVKSPDTTSLE-GDTDCGEDGSLGSCWEE----------PASRR-LSRGTLIRHHPVPCS--------------SSHGTDNGNRRMVPPYHSGAACAEMIGYARRLSPSHEAALGGLRQWLTRESVNISPLLGDVGLALAVSCPPEEEDLVLLRFLRHNAWDVELTRAQLEASLSWRIETGVASNARREPWEVSGCASKEAFEELCRTHYPHYTIGTDRAGRPILVQKYGNFDTSKLQEFTTLPGLLRYHAWEQENNADLLRRASARTGYLVETYAVIMDFKGMSMGQVNRDFLWLLRKLSEMDRTHYPGRGGVIFVINTPPLFGLAWQGIRGFLTTQATVHIFGVEKEWKAALAEAVDPAVLPLDYGGTAPHLADTPLLPAFHRALGRDTPAR-----VGAAXXXXXXXXXXXCHSGMQEREGEAAVPVECEGDVTARSMSALLRRFSLG-GDGDSCTLERQSSSSDGSSLGGDQAGGVGPVVFERDVDGGG----GGSSESGGVDRADGGDGTNRSAKTWGKRGKVVP-KDVPQEVGGSGVTNEDDDGTNKNSTRGGAPSHRPVSGGG--APSNSYDSAVHLG-------ARAAASMLELPASDDPRATAS 584
[Close]
BLAST of mRNA_H-canaliculatus_F_contig150.3769.1 vs. uniprot
Match: D8LT58_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT58_ECTSI)

HSP 1 Score: 410 bits (1054), Expect = 9.590e-131
Identity = 199/259 (76.83%), Postives = 222/259 (85.71%), Query Frame = 2 
Query:  341 LPSYHPDAACAELTGYAGKLSSSHEAALGGLRQWLARDSVDLTPLLGD-----GRVYPPEEEDLALLRFLRQNAWDVELTRAQLEATLSWRVESGVAAAARTEPWELSKCASPETFEQLCRAHYPHYTLGTDRVGRPILVQKYGNFDISKLQEYTTLHGLLLYHAWEQERNAELLRRATARTGYLVETYAMIMDLGGMSMGHVSRDFLWLLREISEIDRKNYPGRGGDIYVINTPPLFGLVWQGIRGLLATQASVHVFG 1102
            +P YHP AACAE+  YA +LSSSHEAALGGLRQWL R+SV+L+PLLGD         PPEEEDL LLRFLR NAWDVELTRAQLEA+LSWRVE+GVA+ AR EPWE+S CAS E FE+LCR HYPHYT+GTDRVGRPILVQKYGNFD SKLQE+TTL GLL YHAWEQE NA+LLRR +ARTGYLVETYA++MD  GMSMG V+RDFLWLLRE+SE+DRK+YPGRGG I+VINTPPLFGLVWQGIRG LATQ   H +G
Sbjct:    2 VPPYHPGAACAEMIDYARRLSSSHEAALGGLRQWLTRESVNLSPLLGDVGLTLAASCPPEEEDLVLLRFLRHNAWDVELTRAQLEASLSWRVETGVASNARREPWEVSGCASAEAFEELCRTHYPHYTIGTDRVGRPILVQKYGNFDTSKLQEFTTLPGLLRYHAWEQENNADLLRRTSARTGYLVETYAVVMDFKGMSMGQVNRDFLWLLRELSEMDRKHYPGRGGVIFVINTPPLFGLVWQGIRGFLATQLFGHFWG 260
[Close]
BLAST of mRNA_H-canaliculatus_F_contig150.3769.1 vs. uniprot
Match: A0A7S1UE19_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UE19_9STRA)

HSP 1 Score: 192 bits (487), Expect = 3.850e-48
Identity = 107/287 (37.28%), Postives = 164/287 (57.14%), Query Frame = 2 
Query:  335 LALPSYHPDAACAELTGYAGKLSSSHEAALGGLRQWLARDSVDLTPLLGDGRVYPPEEEDLALLRFLRQNAWDVELTRAQLEATLSWRVESGVAAAARTEPWELSKCASPETFEQLCRAHYPHYTLGTDRVGRPILVQKYGNFDISKLQEYTTLHGLLLYHAWEQERNAELLRRATARTGYLVETYAMIMDLGGMSMGHVSRDFLWLLREISEIDRKNYPGRGGDIYVINTPPLFGLVWQGIRGLLA--TQASVHVFGKERDWKRALAELMDPAVLPLEYGGAAPSL 1189
            L  P  HP A  A   GY G L    E  L   R+ +A  +  L   L     +  E  D A LRFLR   WDVE+  A++E+ L WR + G       EP ++  C  PE   +    ++PH+ LG DR  RPIL+++YG F+I  L E TT+  LL YH W Q++  E+++    R G  +ETY +++D+ GM++  V+RDFL L+++I+ ID+  +P R G ++++N P +F +VW+G+R  L   T++ + +F ++ DW   L EL++P +LP +YGG  P L
Sbjct:   10 LPYPEGHPAAGGAP--GYLGTLDEEQEELLSQFREMVA--AKGLAAALAQLAEFD-ESPDYAALRFLRACKWDVEVAVARMESHLDWRRDFGFEEIMMLEPAQILGC-DPEAVNR----YFPHWQLGFDRQHRPILLKQYGPFEIWNLLEQTTMEQLLRYHVWWQQKGVEIMKYKGQREGCPIETYTIVLDVQGMALTQVTRDFLRLVQQIAAIDQNEFPERLGTLFIVNVPRVFPMVWRGVRPFLDPDTESKIKIFSRKEDWAPELIELVEPEMLPEQYGGTGPPL 286
[Close]
BLAST of mRNA_H-canaliculatus_F_contig150.3769.1 vs. uniprot
Match: A0A6U4K456_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4K456_9STRA)

HSP 1 Score: 192 bits (487), Expect = 3.090e-46
Identity = 107/287 (37.28%), Postives = 164/287 (57.14%), Query Frame = 2 
Query:  335 LALPSYHPDAACAELTGYAGKLSSSHEAALGGLRQWLARDSVDLTPLLGDGRVYPPEEEDLALLRFLRQNAWDVELTRAQLEATLSWRVESGVAAAARTEPWELSKCASPETFEQLCRAHYPHYTLGTDRVGRPILVQKYGNFDISKLQEYTTLHGLLLYHAWEQERNAELLRRATARTGYLVETYAMIMDLGGMSMGHVSRDFLWLLREISEIDRKNYPGRGGDIYVINTPPLFGLVWQGIRGLLA--TQASVHVFGKERDWKRALAELMDPAVLPLEYGGAAPSL 1189
            L  P  HP A  A   GY G L    E  L   R+ +A  +  L   L     +  E  D A LRFLR   WDVE+  A++E+ L WR + G       EP ++  C  PE   +    ++PH+ LG DR  RPIL+++YG F+I  L E TT+  LL YH W Q++  E+++    R G  +ETY +++D+ GM++  V+RDFL L+++I+ ID+  +P R G ++++N P +F +VW+G+R  L   T++ + +F ++ DW   L EL++P +LP +YGG  P L
Sbjct:   10 LPYPEGHPAAGGAP--GYLGTLDEEQEELLSQFREMVA--AKGLAAALAQLAEFD-ESPDYAALRFLRACKWDVEVAVARMESHLDWRRDFGFEEIMMLEPAQILGC-DPEAVNR----YFPHWQLGFDRQHRPILLKQYGPFEIWNLLEQTTMEQLLRYHVWWQQKGVEIMKYKGQREGCPIETYTIVLDVQGMALTQVTRDFLRLVQQIAAIDQNEFPERLGTLFIVNVPRVFPMVWRGVRPFLDPDTESKIKIFSRKEDWAPELIELVEPEMLPEQYGGTGPPL 286
[Close]
BLAST of mRNA_H-canaliculatus_F_contig150.3769.1 vs. uniprot
Match: A0A6U4K475_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4K475_9STRA)

HSP 1 Score: 192 bits (487), Expect = 6.220e-46
Identity = 107/287 (37.28%), Postives = 164/287 (57.14%), Query Frame = 2 
Query:  335 LALPSYHPDAACAELTGYAGKLSSSHEAALGGLRQWLARDSVDLTPLLGDGRVYPPEEEDLALLRFLRQNAWDVELTRAQLEATLSWRVESGVAAAARTEPWELSKCASPETFEQLCRAHYPHYTLGTDRVGRPILVQKYGNFDISKLQEYTTLHGLLLYHAWEQERNAELLRRATARTGYLVETYAMIMDLGGMSMGHVSRDFLWLLREISEIDRKNYPGRGGDIYVINTPPLFGLVWQGIRGLLA--TQASVHVFGKERDWKRALAELMDPAVLPLEYGGAAPSL 1189
            L  P  HP A  A   GY G L    E  L   R+ +A  +  L   L     +  E  D A LRFLR   WDVE+  A++E+ L WR + G       EP ++  C  PE   +    ++PH+ LG DR  RPIL+++YG F+I  L E TT+  LL YH W Q++  E+++    R G  +ETY +++D+ GM++  V+RDFL L+++I+ ID+  +P R G ++++N P +F +VW+G+R  L   T++ + +F ++ DW   L EL++P +LP +YGG  P L
Sbjct:   10 LPYPEGHPAAGGAP--GYLGTLDEEQEELLSQFREMVA--AKGLAAALAQLAEFD-ESPDYAALRFLRACKWDVEVAVARMESHLDWRRDFGFEEIMMLEPAQILGC-DPEAVNR----YFPHWQLGFDRQHRPILLKQYGPFEIWNLLEQTTMEQLLRYHVWWQQKGVEIMKYKGQREGCPIETYTIVLDVQGMALTQVTRDFLRLVQQIAAIDQNEFPERLGTLFIVNVPRVFPMVWRGVRPFLDPDTESKIKIFSRKEDWAPELIELVEPEMLPEQYGGTGPPL 286
[Close]
BLAST of mRNA_H-canaliculatus_F_contig150.3769.1 vs. uniprot
Match: A0A835ZHE9_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHE9_9STRA)

HSP 1 Score: 161 bits (408), Expect = 2.390e-40
Identity = 99/289 (34.26%), Postives = 148/289 (51.21%), Query Frame = 2 
Query:  353 HPDAACAELTGYAGKLSSSHEAALGGLRQWLA----RDSVDLTPLLGDGRVYPPEEE-DLALLRFLRQNAWDVELTRAQLEATLSWRVESGVAAAARTEPWELSKCASPETFEQLCRAHYPHYTLGTDRVGRPILVQKYGNFDISKLQEYTTLHGLLLYHAWEQERNAELLRRATAR--------------------TGYLVETYAMIMDLGGMSMGHVSRDFLWLLREISEIDRKNYPGRGGDIYVINTPPLFGLVWQGIRGLL-ATQASVHVFGKERDWKRALAELM 1141
            HP ++     GY G L+ +  AAL  LR  ++    +  +D++ +      Y   E+ D  LLR+LR + +DVE T   L   ++WR + G AA     P E+    + E    L  A YPH+ LG DR GRP+L+ +YG FD   L   TT   L  YH WEQE+NA LL R                        +G  ++ Y++I+DL G+ +G ++ + + LLR I+E D ++YP R    YV+NTPPLFG++W  IRG L  + A + V    + W++    L+
Sbjct:    3 HPHSSNDGAKGYLGNLAEAQTAALAALRARVSDGQQQGLLDISSITLSCDGYGESEDLDRCLLRYLRAHGFDVERTLVILGENVAWRAQEGTAALRAQTPAEVLGVPAAE-LRALIAARYPHWLLGDDRRGRPVLLYRYGAFDARALLRRTTARRLQRYHVWEQEQNARLLARRARXXXXXXXXXXXXXXXXXXXXXSGCDMDAYSLILDLQGLGVGQITSELVALLRYIAETDARHYPRRCATTYVVNTPPLFGVIWGAIRGCLEGSSADLRVLSDRKRWQQVRCALV 290
[Close]
BLAST of mRNA_H-canaliculatus_F_contig150.3769.1 vs. uniprot
Match: A0A7S1UDP5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UDP5_9STRA)

HSP 1 Score: 127 bits (319), Expect = 1.830e-29
Identity = 79/212 (37.26%), Postives = 115/212 (54.25%), Query Frame = 2 
Query:  335 LALPSYHPDAACAELTGYAGKLSSSHEAALGGLRQWLARDSVDLTPLLGDGRVYPPEEEDLALLRFLRQNAWDVELTRAQLEATLSWRVESGVAAAARTEPWELSKCASPETFEQLCRAHYPHYTLGTDRVGRPILVQKYGNFDISKLQEYTTLHGLLLYHAWEQERNAELLRRATARTGYLVETYAMIMDLGGMSMGHVSRDFLWLLREIS 970
            L  P  HP A  A   GY G L    E  L   R+ +A  +  L   L     +  E  D A LRFLR   WDVE+  A++E+ L WR + G       EP ++  C  PE   +    ++PH+ LG DR  RPIL+++YG F+I  L E TT+  LL YH W Q++  E+++    R G  +ETY +++D+ GM++  V+RDFL L ++I+
Sbjct:   10 LPYPEGHPAAGGAP--GYLGTLDEEQEELLSQFREMVA--AKGLAAALAQLAEFD-ESPDYAALRFLRACKWDVEVAVARMESHLDWRRDFGFEEIMMLEPAQILGC-DPEAVNR----YFPHWQLGFDRQHRPILLKQYGPFEIWNLLEQTTMEQLLRYHVWWQQKGVEIMKYKGQREGCPIETYTIVLDVQGMALTQVTRDFLRLPQQIA 211
[Close]
BLAST of mRNA_H-canaliculatus_F_contig150.3769.1 vs. uniprot
Match: A0A835XSP7_9CHLO (CRAL-TRIO domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XSP7_9CHLO)

HSP 1 Score: 120 bits (300), Expect = 1.520e-25
Identity = 77/233 (33.05%), Postives = 111/233 (47.64%), Query Frame = 2 
Query:  485 GRVYPPEEEDLALLRFLRQNAWDVELTRAQLEATLSWRVESGVAAAARTEPWELSKCASPETFEQLCRA--HYPHYTLGTDRVGRPILVQKYGNFDISKLQEYTTLHGLLLYHAWEQER-NAELLRRATARTGYLVETYAMIMDLGGMSMGHVSRDFLWLLREISEIDRKNYPGRGGDIYVINTPPLFGLVWQGIRGLLATQASVHVFGKERDWKRALAELMDPAVLPLEYGG 1174
            G + P  ++   LLRFL+   WDV           +WR E GV            K A    F +L R   HYPH+   TDR GRP+ ++  G  D +K+ E TTL  LL YH WE E+   ++L   T   G  + T  +I+DL G+SM +       LLR ++ ID+  Y    G +++INTP +F LVW  +  LL  +    +     D+   + +L+    LP   GG
Sbjct:   47 GALLPGHDDRFTLLRFLKARQWDVHRATIMYTKMTAWRKEHGV-----------DKLAESFEFTELDRVAPHYPHFYHKTDRFGRPVYIELSGRTDAAKILEGTTLERLLDYHVWEWEKLTRQILPACTLIAGRPIITRNVILDLNGLSMKNFGTAAQKLLRTVAAIDQDYYCELLGQMFIINTPAIFRLVWAIVNPLLEERTRRKIVILGHDFLPTVTQLIPEENLPKCLGG 268
[Close]
BLAST of mRNA_H-canaliculatus_F_contig150.3769.1 vs. uniprot
Match: A0A4S8MDF2_DENBC (CRAL-TRIO domain-containing protein n=1 Tax=Dendrothele bispora (strain CBS 962.96) TaxID=1314807 RepID=A0A4S8MDF2_DENBC)

HSP 1 Score: 113 bits (282), Expect = 9.180e-24
Identity = 87/285 (30.53%), Postives = 134/285 (47.02%), Query Frame = 2 
Query:  344 PSYHPDAACAELTGYAGKLSSSHEAALGGLRQWLARDSVDLTPLLGDGRVYPPEEEDLALLRFLRQNAWDVELTRAQLEATLSWRVESGVAAAARTEPWELSKCASPETFEQLCRAHYPHYTLGTDRVGRPILVQKYGNFDISKLQEYTTLHGLLLYHAWEQERNAEL-LRRATARTGYLVETYAMIMDLGGMSMGHVSRDFLWLLREI----SEIDRKNYPGRGGDIYVINTPPLFGLVWQGIRGLL--ATQASVHVF-GKERDWKRALAELMDPAVLPLEYGG 1174
            P+Y P        G+ G LS+  + AL   +  L +           G       +D  LLRFLR   +DV L +  L +   WR + GV    ++  ++  + A  + +       YP +   TD+ GRPI ++++G  DI+KL + TT    L    WE E++    L   +A  G+ VET+  I+DL G+++    R F W +++     S+I +  YP   G  Y++  P LFG VW  ++  L   T A + V  G  +DWK AL E + P  LP   GG
Sbjct:    9 PNYKPK------PGHLGNLSAEQQKALDTFKNELKQQ----------GAFVEERMDDALLLRFLRARKFDVALAKTMLLSAEQWRKDFGVEEIVKS--FDYKEKAEVDKY-------YPQFYHKTDKDGRPIYIERFGQLDINKLYQCTTQERQLQRLVWEYEKSISTRLPACSASAGHPVETFCTILDLRGVTL----RSF-WNVKDFVMNASKIGQDRYPETMGKFYIVGAPYLFGTVWAVVKRWLDEVTVAKIAVLSGDVKDWKGALLEQIPPENLPHYLGG 263
[Close]
BLAST of mRNA_H-canaliculatus_F_contig150.3769.1 vs. uniprot
Match: D8QPC3_SELML (CRAL-TRIO domain-containing protein (Fragment) n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QPC3_SELML)

HSP 1 Score: 109 bits (272), Expect = 9.520e-23
Identity = 73/237 (30.80%), Postives = 118/237 (49.79%), Query Frame = 2 
Query:  473 LLGDGRVYPPEEEDLALLRFLRQNAWDVELTRAQLEATLSWRVESGVAAAARTEPWELSKCASPETFEQLCRAHYPHYTLGTDRVGRPILVQKYGNFDISKLQEYTTLHGLLLYHAWEQERNAELLRRATAR-TGYLVETYAMIMDLGGMSMGHVSRDFLWLLREISEIDRKNYPGRGGDIYVINTPPLFGLVWQGIRGLL--ATQASVHVFGKERDWKRALAELMDPAVLPLEYGG 1174
            LL +  +    + D  LLRFLR  ++DV   +A  EA L WR++ G      T  +       PE    L +  YPH+   TD++GRP+ ++K G   + +L + TT+  +++ H  E E   E    A +R  G  +     I+DL G++M H+S+     ++ IS++D+  YP   G ++++N P  F  +W  I+  L   TQ  + V G   ++   L EL+D   LP   GG
Sbjct:    9 LLVEHNLVRKRDTDCDLLRFLRARSFDVAKAKAMYEAMLDWRMQVGADTIRETFDF-------PE--RNLVKDLYPHFHHKTDKLGRPLYIEKLGQLQVDELMKITTMDRMMMEHIQEWEILIEWKFPACSRKAGKTISQSLAILDLKGVTMKHMSKQVRHFIQNISKVDQDYYPEFLGKMFIVNAPMAFKAIWTVIKPWLDKRTQKKIEVHGS--NFAPKLLELVDKQNLPEFLGG 234
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig150.3769.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCF8_9PHAE3.870e-17052.69CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
D8LT58_ECTSI9.590e-13176.83CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S1UE19_9STRA3.850e-4837.28Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A6U4K456_9STRA3.090e-4637.28Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6U4K475_9STRA6.220e-4637.28Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A835ZHE9_9STRA2.390e-4034.26CRAL-TRIO domain-containing protein n=1 Tax=Tribon... [more]
A0A7S1UDP5_9STRA1.830e-2937.26Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A835XSP7_9CHLO1.520e-2533.05CRAL-TRIO domain-containing protein n=1 Tax=Edapho... [more]
A0A4S8MDF2_DENBC9.180e-2430.53CRAL-TRIO domain-containing protein n=1 Tax=Dendro... [more]
D8QPC3_SELML9.520e-2330.80CRAL-TRIO domain-containing protein (Fragment) n=4... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig150contigH-canaliculatus_F_contig150:52284..60307 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score413.7
Seed ortholog evalue2e-112
Seed eggNOG ortholog2880.D8LT58
EggNOG free text desc.macromolecule localization
EggNOG OGsKOG1471@1,KOG1471@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCRAL-TRIO domain
Ec32 orthologEc-12_005330.1
Exons7
Model size3715
Cds size2394
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929243.5188653-UTR-H-canaliculatus_F_contig150:52283..523231622929243.5188653-UTR-H-canaliculatus_F_contig150:52283..52323Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig150 52284..52323 +
1696845732.9949589-UTR-H-canaliculatus_F_contig150:52283..523231696845732.9949589-UTR-H-canaliculatus_F_contig150:52283..52323Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig150 52284..52323 +
1622929243.6549501-UTR-H-canaliculatus_F_contig150:59026..603071622929243.6549501-UTR-H-canaliculatus_F_contig150:59026..60307Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig150 59027..60307 +
1696845733.0728242-UTR-H-canaliculatus_F_contig150:59026..603071696845733.0728242-UTR-H-canaliculatus_F_contig150:59026..60307Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig150 59027..60307 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929243.5336685-CDS-H-canaliculatus_F_contig150:52323..526981622929243.5336685-CDS-H-canaliculatus_F_contig150:52323..52698Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig150 52324..52698 +
1696845733.0054593-CDS-H-canaliculatus_F_contig150:52323..526981696845733.0054593-CDS-H-canaliculatus_F_contig150:52323..52698Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig150 52324..52698 +
1622929243.5532222-CDS-H-canaliculatus_F_contig150:54422..545811622929243.5532222-CDS-H-canaliculatus_F_contig150:54422..54581Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig150 54423..54581 +
1696845733.0142868-CDS-H-canaliculatus_F_contig150:54422..545811696845733.0142868-CDS-H-canaliculatus_F_contig150:54422..54581Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig150 54423..54581 +
1622929243.5725632-CDS-H-canaliculatus_F_contig150:55020..551971622929243.5725632-CDS-H-canaliculatus_F_contig150:55020..55197Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig150 55021..55197 +
1696845733.0228775-CDS-H-canaliculatus_F_contig150:55020..551971696845733.0228775-CDS-H-canaliculatus_F_contig150:55020..55197Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig150 55021..55197 +
1622929243.590402-CDS-H-canaliculatus_F_contig150:55655..557941622929243.590402-CDS-H-canaliculatus_F_contig150:55655..55794Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig150 55656..55794 +
1696845733.0316484-CDS-H-canaliculatus_F_contig150:55655..557941696845733.0316484-CDS-H-canaliculatus_F_contig150:55655..55794Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig150 55656..55794 +
1622929243.6042023-CDS-H-canaliculatus_F_contig150:56711..567721622929243.6042023-CDS-H-canaliculatus_F_contig150:56711..56772Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig150 56712..56772 +
1696845733.0432947-CDS-H-canaliculatus_F_contig150:56711..567721696845733.0432947-CDS-H-canaliculatus_F_contig150:56711..56772Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig150 56712..56772 +
1622929243.6259606-CDS-H-canaliculatus_F_contig150:57161..572911622929243.6259606-CDS-H-canaliculatus_F_contig150:57161..57291Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig150 57162..57291 +
1696845733.0550392-CDS-H-canaliculatus_F_contig150:57161..572911696845733.0550392-CDS-H-canaliculatus_F_contig150:57161..57291Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig150 57162..57291 +
1622929243.640134-CDS-H-canaliculatus_F_contig150:57673..590261622929243.640134-CDS-H-canaliculatus_F_contig150:57673..59026Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig150 57674..59026 +
1696845733.0641065-CDS-H-canaliculatus_F_contig150:57673..590261696845733.0641065-CDS-H-canaliculatus_F_contig150:57673..59026Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig150 57674..59026 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig150.3769.1prot_H-canaliculatus_F_contig150.3769.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig150 52324..59026 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig150.3769.1

>prot_H-canaliculatus_F_contig150.3769.1 ID=prot_H-canaliculatus_F_contig150.3769.1|Name=mRNA_H-canaliculatus_F_contig150.3769.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=798bp
MGAHRRRFVRQRNTANRRRGTKTSDVASLESGDGSCSLGSWDSAHACDAR
TASPSPRSDLAPGTLIRRPAVSCDGDIQRVDREKGGNVKALNSGTNENLA
LPSYHPDAACAELTGYAGKLSSSHEAALGGLRQWLARDSVDLTPLLGDGR
VYPPEEEDLALLRFLRQNAWDVELTRAQLEATLSWRVESGVAAAARTEPW
ELSKCASPETFEQLCRAHYPHYTLGTDRVGRPILVQKYGNFDISKLQEYT
TLHGLLLYHAWEQERNAELLRRATARTGYLVETYAMIMDLGGMSMGHVSR
DFLWLLREISEIDRKNYPGRGGDIYVINTPPLFGLVWQGIRGLLATQASV
HVFGKERDWKRALAELMDPAVLPLEYGGAAPSLASTPLLPAVHCALQRVA
PAALPLPAVGGAGCGKETDAAAHAMCEEDATASSMSSILRCFSAGSGDGP
CGSLEGKSHYGGGGGGGGGSPVMSGRRLGGGGDGGVGRSLSFTGAEKAGE
GAGGGSGIVAPCKAFPKEINGCGLTNGDNPSTSKTPARALPPRRPFSSGT
PVFDNGGRDYTQPRGITPRAPPAEAAASVVALPVSDDPRVVVSSLPPPLP
PPPLPSPPLTSSPCAVKATDTTAAPRAKKAGAKNVITVKTNWRRGFWKPS
PARGWPRRSRGPWQLRPSGLPWAPPGLPPASRKPCFRTWSGPRGCRPSRR
RSFWGAGSSGTNRWCSQSPHYAAYGGAVYSQFGERPGYWAACVRKARRLG
DWLTDLSGEGMKGHACKGRASQGIFSSGYVVTSCQRREYLHVIGLYK*
back to top

mRNA from alignment at H-canaliculatus_F_contig150:52284..60307+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig150.3769.1 ID=mRNA_H-canaliculatus_F_contig150.3769.1|Name=mRNA_H-canaliculatus_F_contig150.3769.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=8024bp|location=Sequence derived from alignment at H-canaliculatus_F_contig150:52284..60307+ (Hapterophycus canaliculatus Oshoro5f female)
GGTCCCTATTGCCCAGTCCTCGCTCTCTCTATCTCTGCCCATGGGTGCTC
ATCGACGTCGTTTTGTTCGCCAGCGGAATACCGCGAACAGGAGGCGCGGA
ACAAAGACCTCGGATGTTGCTTCTCTGGAGAGCGGCGATGGGTCTTGTTC
GTTGGGATCTTGGGACAGCGCTCATGCCTGTGATGCGCGAACGGCATCTC
CATCTCCGCGAAGTGATCTCGCCCCCGGAACGCTGATTCGTCGTCCTGCG
GTGTCTTGTGACGGCGATATCCAAAGGGTAGATAGGGAGAAGGGCGGCAA
TGTGAAAGCGTTGAACAGCGGGACGAACGAGAATCTGGCGCTGCCATCGT
ACCATCCGGACGCTGCCTGCGCGGAGTTGACCGGCTACGCGGGGAAATTG
TCTTCGTCCCATGAGGTGCTTGTATGTGTCTGAGCTCTATCCACTTGTAT
CTCTGATAGCTACCATGATACTGGTACTGTAGTCGGTGGATGGTTCAGTT
GGGGAGCGGTGCGGTCCCGTTGCGGGTGCCCATAACCCCGTATGTGTCTA
GTCTGCGAGCCAGGTTATACCGTTGTACCTTGTGCCGTATCGCAACGTCT
ATGTACGCTTTTATGTAAACGATTGTTCCTTCCGACCTGATGACTGCCGG
TTCGGACCACAGAAGGCTGTCTTGGGAGCCACTCGTGTCTTATCATAGGA
AAGAGGAGAGTCGCTGCTCACCTTGACATGCAGATGGTCTTGTGTACAGG
ACCTGAGATCCGCCAGTTTTTATCTTCCACCAAAAAAATCAACCGATATC
TACAGTAGACTACACGAGCCTCTTGTATAGAGTCAGCAGCGGACACAGCA
GTCTACCTGCCGTTTCAAGCGGCGTGTTGTCCTTTTGGAAGTGACCTGTA
ACCCGCGAAGATCAGCGCTGTGTTCGGCAAATCTGGGCTGGTGCGGCATG
CGCACAGCAGTAAGAGCGAACACGAAGGTGGCACGATGTCGAACGGCATG
GTGCAGAGATCTGAAGCGTCCATCTCGTTGCCTCGCGTCGCAGAGAGGGT
CCCAAACTGCCCCCTAACCGCGACCGTTCTTGTTTGGAGCGTCTCTCCAA
CCGAAGTCTTGATTCTCTCGTAACGACAACGACGTTTCGCTGGGGCACGG
AAGCATAGACTTGAGCCGGGGACGAAGGGGGGCTCCACCGGTGTATCCAG
CACTCTAAATTTGTCCCCCTTCGTTTCCACTGATCCTGCTGTCATTAGCC
GTAGCACTGCTTGAATTGGCACGGGGCCCTGAGTTGGCGAGTCCTTTCAG
GTGGCACGGAGATACGGAGATACGGACATGCGCAAAGGAAAACAAGGTCG
AAATGTCCACACGCAGGCCTCTGAGATCGCACGGCGGTCCGCTGGTTCTA
GGGAAAAAGCCCTTATGCCCAGACGAGCTTGTTTATGCTCCCGCGAGGGA
CTGCTGTGCGAAACGCGTCGAGCTGTGCGATAGATGAAACACTTCGTTGT
CCCGATTCTGCGATGTGTCCATGGCGGAATACGTGTTTATCCCCGTACAA
AGCCCACCGGCGGATCTTATTTCACAGCGAGTTCCGGCATTTTATTTTTT
GCTGCACTTTTGGCAATTTGCCGCCGTCTGTTGGATGTTGGACGGCAGCG
ATGCGTTCGTGTGTCTTCGTGGTGTGTTCTGAGTGCTTTTCGATCTAGAT
GGTGACGGCATGCAACGCGTAGTCTGCCCAATGGAAATGTACCCTTCAAG
CCGCTGTGTTTTCCATCTGCACATCGCAGCGTCCCGTGATATCGCACCGG
CGTTGACTTGAAAGCGAAGAGGCAAACGATCAGTCGACTCCCGCCGAGGC
GCCTTTGGGGTGATACGAAACTTGGAAAACACGCGGGGGTGCGCGAAAGC
ACCAAGATTTTACACGAAGTACGTGATTTTGGTGACCATCGCACAGGGGT
GCTCGCTCGCTCAGGCACACCGAGGGCATTCACAAATATTTCATGCGCGC
CCGCCTCAACACCCACTCTTTACCCTTCCCTCGCTTCCTCTGTCCCCTAC
TCGCAATCCGTCAACGCACGTCGCACGCCCACCCCCGCACGGCGGCGGCA
TCCCCACACACAAATATAATTTACCAACCAACGCAATAGGCCGCTCTCGG
CGGTCTTCGGCAGTGGCTAGCGCGAGATTCGGTGGACCTGACCCCTCTCC
TCGGCGACGGGAGGGTGTATCCGCCGGAGGAGGAAGATCTGGCGCTCCTG
CGATTTCTTCGGCAGAACGCTTGGGACGTGGAGTTGACACGCGCACAGGT
ACCATTTTGCTGTCCTGTCCAACACGTTTCGTAGCATTGGCCCCAACTTT
TGAGCTCCAACTGTCTTACTGGTAGCTTCGTCGATACTCATTGCGGTCTG
CTGTGAGTAAGCCCGTCTGAGTACGTGCTTGCCTCTGAATCATGTGGACC
ACATCTGGACCACATCTGGACCACATCTGAACCACAACATTCACCTAGCC
GTTGTTTGTGGTGCCGGATATATTATCCCTCTTTCCTCAATTTCACCCGT
CATCTGCCCTTTTCTCCGCCCTCCATTCTCAAGCGCTTCATTCCCGACCT
TATTGGTTGAAGATTGTCAACACACCTCCTAAAACCTGAGTCAGGTATGT
TTTGCGCACTTTTAGCTTACCACAGCCTCGAGACAACCGCTTCACCTCTT
CTACGCACACCATAAATGACCGCTTGACAAACCGCAGCTCGAGGCCACCC
TATCGTGGAGGGTGGAGAGCGGCGTTGCAGCTGCTGCGCGAACAGAGCCG
TGGGAGTTAAGCAAGTGCGCGAGCCCGGAAACGTTCGAGCAGCTCTGCAG
GGCACACTACCCTCACTACACCCTCGGGACCGACCGTGTCGGACGACCAA
TTCTCGTCCAAAAAGTGCGTCCGTGTTTTTTTAATACCATCGTGATCAGG
CGGGCGGTTGTTTTAACTGGTGATGCTATCGCCGTTCATGATTGTTTGCA
GCTCTGGCCACGTTGGCTGGTCCGCCTGGCCGATGAGGGGGCGCCGGTCT
GACCAGGACGAGCACATGCGTGGGTACGCGCGTGCGTGTCCTTGATTTTC
AGAACTGACTTCGCCTGCGGGCTCACCGATGACTCATCCGAGGTGCGCGT
TCGGTGCAGGCACGTGCTTGCTGGTAGCAATATTTCTGTGGTGTGCGCGG
TGACCCAGCGGTGTGTGATGACCTTTTCCCTGCTCTAGGCTCCCTTTTCC
TTTGCTTTTCGCTCCTCGACTCTGCTCCTCCCCTCCTCCTCCTCACCCTC
CTCCTCCTCACCCTCCTCCCCCTCCGACAAACACGCACATACACCGCATA
CCCGTGCACGCGCGCGTCGCAGTACGGCAACTTCGACATCTCCAAGCTGC
AGGAGTACACGACGCTGCACGGGCTGCTGCTCTACCACGCCTGGGAGCAG
GAAAGAAACGCCGAGCTCTTGCGGCGGGCCACAGCACGGACGGGCTACCT
CGTCGAGACTTGTGAGAAGCGCCGCAGATTGTGCTTTTTGTGAAGTGGTC
TCGACTCACGAGCGCACTTTTATTCATCAAGCCCTCTCCTAGCGGCCTCA
AAACTGCGGGGAAACGTGGCACCCAGTGCGTAGAGGACAGTAACAGCAGC
CGCGGCAGCAGTAAGAGCAGCAGAACCAGCGAAAACAGGAGACCCAATAG
CAGCGGCAACATGCACCAAGCAATCTATTGTTGTGTGCAATCGATTGCAA
AGTTGTGTTCGTAGGTTTTCTCCCGAACAGGCTAGGGCGCGTATTGTTTG
TTTGGTGTTTTTGTGTTGCTTTCTGTCTGTATTTTCTTGGCGTTGCGACG
TCACCGACCAGACGTAGAAAGAGCGCGCTCCGTTCGGAAGGCACACAAGG
TGAACGTGTTCTAGACGCACGTGCTGCAAGTGAACGGGTGCCAATGGTGT
TGTCCGCATTGGAGCTCCTGATAGACCTGAAACCATACGTCAGTCTAGAG
AGCGTTGCGTGCCTGCGCTGGTACCTCGCATGAAGGACGACCGCTCAAGC
AGCTGTTGTCCCTGCGCCAATGACAATGCCATTATTTCGAGGTGATTCAA
CGCTGCCAATCGTTCGTCCAAGAGACACTGTCCGACCGCCGTAGATGTTA
ACCGTCTAAGCGTTGCTCTAGAGTTGCTTTTCAGCGCCAGAGAGCGAAGG
CTGACGGGTCCGTCACCTCAAACGGTACCCACATTTGCGTTGTTGCTGCA
GCAGCGCAAGCAGTTAGTTTGTACCTCTTTCGGGTGCTTCGGGTGCACTA
TAACGCTTGGGCACCGTAGTGGAACACCGGTCTATGGCAGCCCTGCACGA
CTCGAACCGCTCAATCCCCTTCCCTCGCGATCACGCTTGTTGCCGGCTCG
CCGTCTTTCGCTTTTGGTGGCACGGCAGACGCGATGATCATGGACTTGGG
TGGAATGTCCATGGGTCACGTCAGCCGGGACTTTCTCTGGTGAGGTTTGG
TTCCGGCGAGGAAATGCCACGGGTTCGACGGGTACCGGTCCGCCCTCCAC
CGGTCTATTTACGGAGAGTTTCGTTGCCGTTGTGAGCCGTTGTCACCATT
GGTTCCATTGTTATCGACATACCGAATCGAGAGCCGATCAGCCTACGCCG
TCCCCCGTTATCGTCTTTCCAGATCGAAGCTGTTGTATCTTGGGACGAAA
GGCTCTTGTGCTTGTCGTGCCCACTGCACACGATGGGGACGTCTACTGCA
ACACCCGAGTCTCTCATCCGTCCTCACATTCCTGGCGTGAGCCTCTCACC
CTACGTGCGACGCAAGCTGCACTTGTCGTCAGTATTCTGAAGCAATGCTG
CCCCCCCCCACCCCCCCGCCCCAAGCAGGCTTTTGCGAGAGATTTCGGAG
ATCGACCGAAAAAATTACCCCGGCCGCGGAGGGGATATTTACGTCATCAA
CACCCCACCGCTATTCGGGCTCGTCTGGCAAGGCATTCGCGGCCTCCTTG
CCACCCAGGTCCGCCGCCCATCGCGACAAAAAGAAGCGCTGTTCCATATC
CTAGTGCGTCGATCTTTTTTTTTTCCGGGGGTGTCTTCGTCCATTGCCGC
TATCCCTTGGCAATGCGCTCCTTCTCGAATCCCCCTTGGGTCATGCTCAT
GGAGAAAAGGGGCCTACGCGCGATAGTGCGAGAGCCAGACAGTTTTCTTT
ACGACTTTGCGCCCGATTGACAAGTCCACTTCTCGCTTCCCTGTGGTGTT
GCTCTATTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTCGCTG
ACCAACCACCCATCGGTTCCGCCCGAACCGACCTTGCTGGGCGCCCCGCC
TGATCGGCCGTCCACCTCGCCACCTGATCCAAACGTTTAGGCCTCTGTCC
ACGTCTTTGGTAAGGAGAGGGATTGGAAGAGGGCGTTGGCGGAACTGATG
GATCCAGCTGTGTTGCCTCTCGAGTACGGCGGCGCGGCTCCGTCCCTGGC
GAGCACCCCTCTCCTCCCGGCCGTCCACTGCGCGCTGCAGCGGGTTGCTC
CTGCGGCGCTGCCGCTGCCGGCGGTGGGGGGCGCGGGGTGTGGAAAAGAG
ACGGACGCGGCGGCGCATGCCATGTGCGAGGAGGACGCTACTGCGAGCTC
GATGTCCTCCATACTACGGTGCTTCTCTGCAGGCAGCGGTGATGGGCCGT
GTGGTAGCCTCGAGGGCAAATCTCACTACGGCGGCGGCGGCGGCGGCGGC
GGCGGTAGCCCGGTCATGAGCGGACGGAGGCTTGGCGGCGGTGGGGACGG
TGGTGTTGGTCGATCTCTTTCTTTCACCGGCGCAGAAAAGGCAGGGGAGG
GGGCAGGAGGAGGGAGCGGAATCGTTGCTCCTTGCAAGGCCTTTCCAAAG
GAAATTAATGGATGCGGTTTAACGAACGGGGACAACCCGAGCACGAGCAA
GACCCCCGCAAGGGCGTTACCACCACGCAGACCTTTTTCGAGCGGCACCC
CCGTTTTTGACAACGGCGGCCGTGATTATACGCAGCCCCGCGGGATAACG
CCGCGAGCACCACCCGCGGAAGCGGCGGCGAGCGTTGTAGCGCTACCCGT
GAGCGATGATCCGCGCGTCGTAGTCTCCTCCCTCCCCCCCCCCCTTCCTC
CCCCCCCTCTCCCCTCTCCTCCTCTCACGTCGTCACCATGCGCTGTCAAA
GCGACGGACACGACGGCAGCACCGAGGGCGAAGAAGGCGGGCGCGAAGAA
CGTGATCACGGTGAAGACGAACTGGCGGCGTGGGTTCTGGAAACCGTCCC
CGGCGCGCGGATGGCCGCGGCGGTCGCGGGGACCGTGGCAGTTGCGACCC
TCGGGGCTACCCTGGGCGCCGCCGGGTTTGCCGCCGGCATCGCGGAAGCC
GTGCTTCCGAACGTGGTCTGGGCCGAGGGGGTGCAGGCCTTCCAGACGGC
GCAGTTTCTGGGGGGCTGGGTCCTCGGGCACTAATAGGTGGTGTAGTCAG
TCCCCTCATTACGCTGCGTACGGAGGGGCCGTCTATAGTCAATTTGGCGA
GAGGCCAGGGTACTGGGCTGCCTGTGTCAGGAAGGCACGCCGGTTGGGCG
ACTGGCTGACCGATCTCTCTGGCGAAGGTATGAAGGGCCATGCATGCAAA
GGTCGAGCCTCACAGGGCATTTTTTCGAGCGGCTACGTCGTGACCTCGTG
TCAAAGGCGAGAGTATCTACACGTCATTGGACTCTACAAGTAGAAAGAAG
GCCGCGATGCGTTGATGCGTTCTCTTCTTCATGCTTCTTCTCTTTCTGTA
ATTTAATGTTTGGAACTTAAGCGACGTGCTGCTGCACCTCCGTCACGAAC
TTACTTGTTGCTCAAAACACGTGTTGTGTCACTAACTGATGTGCCGTGCA
TGTATACCATGAGAATCGTGATTCTGTGTCTGTCGCTGTGTCATACCATC
GGTAATACTTGTAGGCATCAGTGCAAAACTCCCGGGTGTACTTCGGGCGT
GCGGGGCTTCAAGTGGTATAGAATTAATTAGGGGTCGCGGTCAGTGGGCT
TCCTGCTCCTGTCCTGTGACTCCTCCTTGGAGCGCACCTGTTCGCCCCCA
CGACTCTGCGTTCTACATAGAGGTCTGCGTTCGTATACGTTATGGCTACC
GCCCTCTCGCCTTCGCCGCCGAGGGCTCGTAGCCTGCAGGATAGTTCCGA
GGCAACGCCTTTCAAGTTCTCGGGCAACTTGCAGCTGCAAACGTGAACAG
AGAAGGCACAACAGGCTCTGTATATTTGTGTTCTAGGGAGGTACACGTGC
CTGCCTCGATGTACGTGTACCTGATGCTTGTTTCTTCGTTCGCGCAAGGG
CTTGTGCGCAACGACTTACTACAGTATCGTGGGGAGTGCGAGGATGTAAA
AAATGCGGTCGAAAAGCTTTGTTGCTCGTTATTTCCCGTAAGGATTTCGT
GTGCGTATTCAAGTCCTACATTTTTTGTGTTTGACAGCGTTTTTCACAAA
TGCGGCGCAAGTATTCGTTCGCGTCGCGGGTGCGCACGCCTGCTTTTTAT
GGGTGCGTTCATGCGTGCGCATGCTCGAACTCTTGCTTTGAGAGGGCCAT
TTCCTCACCGACAGGGAGGATTCAGGAAAGATTGCAGCTAGCTGTTGCTT
CGTTTACACCCTACGTTTGTTTCAGGTGGGCCGAGGATGTTGAGACAGCG
GCGGACGGCTTTTGGAACGACCAGAGACTACCAACGTGCCTCGGAATGAG
TGGTGTTGTGTGAAAGTCCTGTGGAACCGACAAGGGTTTCGTTCCCCGAG
GGGATTGTTTGATGGCGAGGAAACTGCCGTGTCGTATTGTTGGTCGGGCG
TACGTTCTTGGACCGTCAGAAGTATCCTTGCAATCGTTCGACTCATCATG
GAACTCGGCGAGGTGTCTTCGCGCGTGGGGTTGATGAGTAGCGTCCAAAA
ACATGTTGAACGACACCAACGCAATCGCATGCCGGGGGTACGTCGCCTGC
ACCACTACAGCTACTACAGCTACT
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig150:52284..60307+

>mRNA_H-canaliculatus_F_contig150.3769.1 ID=mRNA_H-canaliculatus_F_contig150.3769.1|Name=mRNA_H-canaliculatus_F_contig150.3769.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=4788bp|location=Sequence derived from alignment at H-canaliculatus_F_contig150:52284..60307+ (Hapterophycus canaliculatus Oshoro5f female)
ATGGGTGCTCATCGACGTCGTTTTGTTCGCCAGCGGAATACCGCGAACAG
GAGGCGCGGAACAAAGACCTCGGATGTTGCTTCTCTGGAGAGCGGCGATG
GGTCTTGTTCGTTGGGATCTTGGGACAGCGCTCATGCCTGTGATGCGCGA
ACGGCATCTCCATCTCCGCGAAGTGATCTCGCCCCCGGAACGCTGATTCG
TCGTCCTGCGGTGTCTTGTGACGGCGATATCCAAAGGGTAGATAGGGAGA
AGGGCGGCAATGTGAAAGCGTTGAACAGCGGGACGAACGAGAATCTGGCG
CTGCCATCGTACCATCCGGACGCTGCCTGCGCGGAGTTGACCGGCTACGC
GGGGAAATTGTCTTCGTCCCATGAGATGGGTGCTCATCGACGTCGTTTTG
TTCGCCAGCGGAATACCGCGAACAGGAGGCGCGGAACAAAGACCTCGGAT
GTTGCTTCTCTGGAGAGCGGCGATGGGTCTTGTTCGTTGGGATCTTGGGA
CAGCGCTCATGCCTGTGATGCGCGAACGGCATCTCCATCTCCGCGAAGTG
ATCTCGCCCCCGGAACGCTGATTCGTCGTCCTGCGGTGTCTTGTGACGGC
GATATCCAAAGGGTAGATAGGGAGAAGGGCGGCAATGTGAAAGCGTTGAA
CAGCGGGACGAACGAGAATCTGGCGCTGCCATCGTACCATCCGGACGCTG
CCTGCGCGGAGTTGACCGGCTACGCGGGGAAATTGTCTTCGTCCCATGAG
GCCGCTCTCGGCGGTCTTCGGCAGTGGCTAGCGCGAGATTCGGTGGACCT
GACCCCTCTCCTCGGCGACGGGAGGGTGTATCCGCCGGAGGAGGAAGATC
TGGCGCTCCTGCGATTTCTTCGGCAGAACGCTTGGGACGTGGAGTTGACA
CGCGCACAGGCCGCTCTCGGCGGTCTTCGGCAGTGGCTAGCGCGAGATTC
GGTGGACCTGACCCCTCTCCTCGGCGACGGGAGGGTGTATCCGCCGGAGG
AGGAAGATCTGGCGCTCCTGCGATTTCTTCGGCAGAACGCTTGGGACGTG
GAGTTGACACGCGCACAGCTCGAGGCCACCCTATCGTGGAGGGTGGAGAG
CGGCGTTGCAGCTGCTGCGCGAACAGAGCCGTGGGAGTTAAGCAAGTGCG
CGAGCCCGGAAACGTTCGAGCAGCTCTGCAGGGCACACTACCCTCACTAC
ACCCTCGGGACCGACCGTGTCGGACGACCAATTCTCGTCCAAAAACTCGA
GGCCACCCTATCGTGGAGGGTGGAGAGCGGCGTTGCAGCTGCTGCGCGAA
CAGAGCCGTGGGAGTTAAGCAAGTGCGCGAGCCCGGAAACGTTCGAGCAG
CTCTGCAGGGCACACTACCCTCACTACACCCTCGGGACCGACCGTGTCGG
ACGACCAATTCTCGTCCAAAAATACGGCAACTTCGACATCTCCAAGCTGC
AGGAGTACACGACGCTGCACGGGCTGCTGCTCTACCACGCCTGGGAGCAG
GAAAGAAACGCCGAGCTCTTGCGGCGGGCCACAGCACGGACGGGCTACCT
CGTCGAGACTTTACGGCAACTTCGACATCTCCAAGCTGCAGGAGTACACG
ACGCTGCACGGGCTGCTGCTCTACCACGCCTGGGAGCAGGAAAGAAACGC
CGAGCTCTTGCGGCGGGCCACAGCACGGACGGGCTACCTCGTCGAGACTT
ACGCGATGATCATGGACTTGGGTGGAATGTCCATGGGTCACGTCAGCCGG
GACTTTCTCTGACGCGATGATCATGGACTTGGGTGGAATGTCCATGGGTC
ACGTCAGCCGGGACTTTCTCTGGCTTTTGCGAGAGATTTCGGAGATCGAC
CGAAAAAATTACCCCGGCCGCGGAGGGGATATTTACGTCATCAACACCCC
ACCGCTATTCGGGCTCGTCTGGCAAGGCATTCGCGGCCTCCTTGCCACCC
AGGCTTTTGCGAGAGATTTCGGAGATCGACCGAAAAAATTACCCCGGCCG
CGGAGGGGATATTTACGTCATCAACACCCCACCGCTATTCGGGCTCGTCT
GGCAAGGCATTCGCGGCCTCCTTGCCACCCAGGCCTCTGTCCACGTCTTT
GGTAAGGAGAGGGATTGGAAGAGGGCGTTGGCGGAACTGATGGATCCAGC
TGTGTTGCCTCTCGAGTACGGCGGCGCGGCTCCGTCCCTGGCGAGCACCC
CTCTCCTCCCGGCCGTCCACTGCGCGCTGCAGCGGGTTGCTCCTGCGGCG
CTGCCGCTGCCGGCGGTGGGGGGCGCGGGGTGTGGAAAAGAGACGGACGC
GGCGGCGCATGCCATGTGCGAGGAGGACGCTACTGCGAGCTCGATGTCCT
CCATACTACGGTGCTTCTCTGCAGGCAGCGGTGATGGGCCGTGTGGTAGC
CTCGAGGGCAAATCTCACTACGGCGGCGGCGGCGGCGGCGGCGGCGGTAG
CCCGGTCATGAGCGGACGGAGGCTTGGCGGCGGTGGGGACGGTGGTGTTG
GTCGATCTCTTTCTTTCACCGGCGCAGAAAAGGCAGGGGAGGGGGCAGGA
GGAGGGAGCGGAATCGTTGCTCCTTGCAAGGCCTTTCCAAAGGAAATTAA
TGGATGCGGTTTAACGAACGGGGACAACCCGAGCACGAGCAAGACCCCCG
CAAGGGCGTTACCACCACGCAGACCTTTTTCGAGCGGCACCCCCGTTTTT
GACAACGGCGGCCGTGATTATACGCAGCCCCGCGGGATAACGCCGCGAGC
ACCACCCGCGGAAGCGGCGGCGAGCGTTGTAGCGCTACCCGTGAGCGATG
ATCCGCGCGTCGTAGTCTCCTCCCTCCCCCCCCCCCTTCCTCCCCCCCCT
CTCCCCTCTCCTCCTCTCACGTCGTCACCATGCGCTGTCAAAGCGACGGA
CACGACGGCAGCACCGAGGGCGAAGAAGGCGGGCGCGAAGAACGTGATCA
CGGTGAAGACGAACTGGCGGCGTGGGTTCTGGAAACCGTCCCCGGCGCGC
GGATGGCCGCGGCGGTCGCGGGGACCGTGGCAGTTGCGACCCTCGGGGCT
ACCCTGGGCGCCGCCGGGTTTGCCGCCGGCATCGCGGAAGCCGTGCTTCC
GAACGTGGTCTGGGCCGAGGGGGTGCAGGCCTTCCAGACGGCGCAGTTTC
TGGGGGGCTGGGTCCTCGGGCACTAATAGGTGGTGTAGTCAGTCCCCTCA
TTACGCTGCGTACGGAGGGGCCGTCTATAGTCAATTTGGCGAGAGGCCAG
GGTACTGGGCTGCCTGTGTCAGGAAGGCACGCCGGTTGGGCGACTGGCTG
ACCGATCTCTCTGGCGAAGGTATGAAGGGCCATGCATGCAAAGGTCGAGC
CTCACAGGGCATTTTTTCGAGCGGCTACGTCGTGACCTCGTGTCAAAGGC
GAGAGTATCTACACGTCATTGGACTCTACAAGTAGGCCTCTGTCCACGTC
TTTGGTAAGGAGAGGGATTGGAAGAGGGCGTTGGCGGAACTGATGGATCC
AGCTGTGTTGCCTCTCGAGTACGGCGGCGCGGCTCCGTCCCTGGCGAGCA
CCCCTCTCCTCCCGGCCGTCCACTGCGCGCTGCAGCGGGTTGCTCCTGCG
GCGCTGCCGCTGCCGGCGGTGGGGGGCGCGGGGTGTGGAAAAGAGACGGA
CGCGGCGGCGCATGCCATGTGCGAGGAGGACGCTACTGCGAGCTCGATGT
CCTCCATACTACGGTGCTTCTCTGCAGGCAGCGGTGATGGGCCGTGTGGT
AGCCTCGAGGGCAAATCTCACTACGGCGGCGGCGGCGGCGGCGGCGGCGG
TAGCCCGGTCATGAGCGGACGGAGGCTTGGCGGCGGTGGGGACGGTGGTG
TTGGTCGATCTCTTTCTTTCACCGGCGCAGAAAAGGCAGGGGAGGGGGCA
GGAGGAGGGAGCGGAATCGTTGCTCCTTGCAAGGCCTTTCCAAAGGAAAT
TAATGGATGCGGTTTAACGAACGGGGACAACCCGAGCACGAGCAAGACCC
CCGCAAGGGCGTTACCACCACGCAGACCTTTTTCGAGCGGCACCCCCGTT
TTTGACAACGGCGGCCGTGATTATACGCAGCCCCGCGGGATAACGCCGCG
AGCACCACCCGCGGAAGCGGCGGCGAGCGTTGTAGCGCTACCCGTGAGCG
ATGATCCGCGCGTCGTAGTCTCCTCCCTCCCCCCCCCCCTTCCTCCCCCC
CCTCTCCCCTCTCCTCCTCTCACGTCGTCACCATGCGCTGTCAAAGCGAC
GGACACGACGGCAGCACCGAGGGCGAAGAAGGCGGGCGCGAAGAACGTGA
TCACGGTGAAGACGAACTGGCGGCGTGGGTTCTGGAAACCGTCCCCGGCG
CGCGGATGGCCGCGGCGGTCGCGGGGACCGTGGCAGTTGCGACCCTCGGG
GCTACCCTGGGCGCCGCCGGGTTTGCCGCCGGCATCGCGGAAGCCGTGCT
TCCGAACGTGGTCTGGGCCGAGGGGGTGCAGGCCTTCCAGACGGCGCAGT
TTCTGGGGGGCTGGGTCCTCGGGCACTAATAGGTGGTGTAGTCAGTCCCC
TCATTACGCTGCGTACGGAGGGGCCGTCTATAGTCAATTTGGCGAGAGGC
CAGGGTACTGGGCTGCCTGTGTCAGGAAGGCACGCCGGTTGGGCGACTGG
CTGACCGATCTCTCTGGCGAAGGTATGAAGGGCCATGCATGCAAAGGTCG
AGCCTCACAGGGCATTTTTTCGAGCGGCTACGTCGTGACCTCGTGTCAAA
GGCGAGAGTATCTACACGTCATTGGACTCTACAAGTAG
back to top