mRNA_H-canaliculatus_F_contig150.3764.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig150.3764.1 vs. uniprot
Match: D8LT63_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LT63_ECTSI) HSP 1 Score: 288 bits (736), Expect = 1.070e-90 Identity = 137/161 (85.09%), Postives = 153/161 (95.03%), Query Frame = 1
Query: 1 CTTSTNPSYSLVSCERTGLDRDGRLLGCSASENCLSTSAVKVPGKLGSPWEYSRQTEDADRAFATLVRAVEGTSEATMKTIDIKRHYLLAQFPSKVPPGSVDSVEFLVKPDDQIVLYRAVSRDTLFLYPLQQPVSDQGKLKERLEGIRKELGWSMYTYRGE 483
CTTSTNPSYSLVSC+RTGLDR+GRLLGCS+SENCLSTSAVKVPGKLGSPWEY+ +T+DAD AFA+LV AVE TSEATMK +D + HY+LA+FPSKVPPGSVDSVEFLVKP+DQIVLYR+VSRDTLFLYPLQQPVSDQGK+KERLEGIR +LGW+MYTYRGE
Sbjct: 107 CTTSTNPSYSLVSCDRTGLDRNGRLLGCSSSENCLSTSAVKVPGKLGSPWEYAMRTDDADTAFASLVHAVERTSEATMKIVDREGHYILAEFPSKVPPGSVDSVEFLVKPEDQIVLYRSVSRDTLFLYPLQQPVSDQGKIKERLEGIRNDLGWNMYTYRGE 267
BLAST of mRNA_H-canaliculatus_F_contig150.3764.1 vs. uniprot
Match: A0A835YK12_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK12_9STRA) HSP 1 Score: 164 bits (414), Expect = 1.720e-44 Identity = 76/155 (49.03%), Postives = 110/155 (70.97%), Query Frame = 1
Query: 1 CTTSTNPSYSLVSCERTGLDRDGRLLGCSASENCLSTSAVKVPGKLGSPWEYSRQTEDADRAFATLVRAVE-GTSEATMKTIDIKRHYLLAQFPSKVPPGSVDSVEFLVKPDDQIVLYRAVSRDTLFLYPLQQPVSDQGKLKERLEGIRKELGWS 462
C T +NPS + V+C R GL RDGRL C +SENC+S+S+V+ P K +PW Y+ +T DA AF L+ + +A + ++ Y+LA+FP+KVPPGSVD VEFL++P D + +R+ +RD++F+YPLQQPVSD+G ++RLE IR +LGW+
Sbjct: 5 CATISNPSATTVTCTRVGLARDGRLPPCRSSENCVSSSSVRSPAKFSAPWNYATETSDAKVAFNKLLDVIPLQIKDANLVDVNDDNLYILAEFPAKVPPGSVDVVEFLLRPADNVCSFRSATRDSVFVYPLQQPVSDRGSNRDRLEAIRNQLGWA 159
BLAST of mRNA_H-canaliculatus_F_contig150.3764.1 vs. uniprot
Match: W7TWW3_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWW3_9STRA) HSP 1 Score: 150 bits (378), Expect = 5.030e-38 Identity = 75/159 (47.17%), Postives = 110/159 (69.18%), Query Frame = 1
Query: 1 CTTSTNPSYSLVSCERTGLDR-DGRLLGCSASENCLSTSAVKVPGKLGSPWEYSRQTEDADRAFATLVRAVEGTSEATMKTIDI----KRHYLLAQFPSKVPPGSVDSVEFLVKPDDQIVLYRAVSRDTLFLYPLQQPVSDQGKLKERLEGIRKELGWS 462
CT+ +NPS+++V+C+R G+D GR C ++ENC+S+++V P K SPW ++ ED A+ +LVRAVE ++ +K ++I K++YL A+ PSKVPPG VD +EFL+ P D +V +R+ SR FLYPL QPV D G +K+RLE I+K +GWS
Sbjct: 97 CTSESNPSFTIVTCDRFGIDPVAGRPKRCLSAENCISSTSVNNPSKYMSPWVFNGAGEDVPTAWLSLVRAVE--AQEGLKVVEIDNGSKQYYLRAEAPSKVPPGGVDDLEFLLSPKDGLVFFRSASRQMAFLYPLTQPVGDGGSIKKRLETIQKAVGWS 253
BLAST of mRNA_H-canaliculatus_F_contig150.3764.1 vs. uniprot
Match: A0A6V1S530_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S530_HETAK) HSP 1 Score: 150 bits (378), Expect = 7.660e-38 Identity = 77/157 (49.04%), Postives = 99/157 (63.06%), Query Frame = 1
Query: 34 VSCERTGLDRDGRLLGCSASENCLSTSAVKVPGKLGSPWEYSRQTEDADRAFATLVRAVEGTS-EATMKTI--DIKRHYLLAQFPSKVPPGSVDSVEFLVKPDDQIVLYRAVSRDTLFLYPLQQPVSDQGKLKERLEGIRKELGWSMYTYRGE*EVT 495
+SC R G DRDGRLLGC +ENCLSTSAVK P K +PW Y QT D A+ LV E S +K + D R+YL P+KVPPGS D +EFL++P D+IVLYR+ +RDT+ +YP QQ + + G+ RLE IR LGW + R + +T
Sbjct: 112 ISCRRYGTDRDGRLLGCLPNENCLSTSAVKNPSKYAAPWTYYTQTASGDSAWRALVELAETDSLNLGLKVVEKDPSRYYLHLTAPAKVPPGSTDDLEFLLRPADKIVLYRSATRDTVLVYPFQQYLPEHGQTAGRLETIRDSLGWDILKQRDKTSLT 268
BLAST of mRNA_H-canaliculatus_F_contig150.3764.1 vs. uniprot
Match: A0A1E7FHJ7_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FHJ7_9STRA) HSP 1 Score: 135 bits (340), Expect = 5.170e-32 Identity = 71/163 (43.56%), Postives = 105/163 (64.42%), Query Frame = 1
Query: 1 CTTSTNPSYSLVSC--ERTGLDRDGRLLGCSASENCLSTSAVKVPGKLGSPWEYSRQTEDADRAFATLVRAVEGTSEATMKTIDIKRHYLLAQFPSKVPPG--SVDSVEFLVKPDDQIVLYRAVSRDTLFLYPLQQPVSDQGKLKERLEGIRKELGWSMYTYR 477
C T+TNPS ++V+C + + DGRL SA+EN +STS+VK P + PW Y +T+DA RA+ +L AV ++ + I++ +YL A P+ PPG VD +EFL++PDD ++LYR+ SR ++F+YPL QPVSD +RL+ IR+ LGW Y+
Sbjct: 156 CITNTNPSRTIVTCRGDMQSNNPDGRLSKVSATENGVSTSSVKNPSRFSPPWSYLTETQDAKRAWKSLQSAVLNVDQSC-QIIELTDNYLHAIVPTTSPPGIEGVDDLEFLIRPDDNVILYRSASRTSVFVYPLTQPVSDNNSNLKRLQKIRQSLGWEELGYQ 317
BLAST of mRNA_H-canaliculatus_F_contig150.3764.1 vs. uniprot
Match: A0A7S0AZ98_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AZ98_9STRA) HSP 1 Score: 131 bits (330), Expect = 1.140e-31 Identity = 69/162 (42.59%), Postives = 102/162 (62.96%), Query Frame = 1
Query: 1 CTTSTNPSYSLVSC--ERTGLDRDGRLLGCSASENCLSTSAVKVPGKLGSPWEYSRQTEDADRAFATLVRAVEGTSEATMKTIDIKRHYLLAQFPSKVPPG-----SVDSVEFLVKPDDQIVLYRAVSRDTLFLYPLQQPVSDQGKLKERLEGIRKELGWSM 465
C T TNPS ++V+C E + DGRL SA+ N +STS+V+ P + PW Y +T DA A+ +L+ V T+E ++ +++ YL A P++ PPG VD +EF++KP+D +VLYR+ SR ++F+YPL QPVSDQ +RL IR +LGW +
Sbjct: 49 CKTDTNPSRTVVTCYGELKKYNEDGRLSKISATANGVSTSSVRNPSRFSPPWNYVTETSDASAAWKSLINVVN-TAEPGIEIVELTDTYLHATAPTQSPPGLTGPAGVDDLEFILKPEDNLVLYRSASRTSVFVYPLTQPVSDQNTNLKRLNKIRNKLGWGL 209
BLAST of mRNA_H-canaliculatus_F_contig150.3764.1 vs. uniprot
Match: A0A7S2KB44_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KB44_9STRA) HSP 1 Score: 127 bits (320), Expect = 8.170e-31 Identity = 69/161 (42.86%), Postives = 99/161 (61.49%), Query Frame = 1
Query: 1 CTTSTNPSYSLVSC--ERTGLDRDGRLLGCSASENCLSTSAVKVPGKLGSPWEYSRQTEDADRAFATLVRAVEGTSEATMKTIDIKRHYLLAQFPSKVPPG----SVDSVEFLVKPDDQIVLYRAVSRDTLFLYPLQQPVSDQGKLKERLEGIRKELGWSM 465
C T T PS +LV+C E + DGRL SA+ N +STS+VK P + PW Y QT+ A A+ +L+R V +K +++ YL A P+ P G ++D +EF+++ DD +VLYR+VSR ++F+YPL QPVSD+ ERL IR ELGW++
Sbjct: 17 CRTDTTPSQTLVTCTGELLSNNADGRLSKVSATANGVSTSSVKNPSRYSPPWSYLTQTDSAGEAWRSLIRVVNNIDPG-IKVLEVTDVYLHATVPTAFPKGLGDGALDDLEFVLRADDNLVLYRSVSRSSVFVYPLTQPVSDRNTNLERLNRIRSELGWAL 176
BLAST of mRNA_H-canaliculatus_F_contig150.3764.1 vs. uniprot
Match: A0A7S2RG67_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RG67_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.710e-30 Identity = 64/156 (41.03%), Postives = 98/156 (62.82%), Query Frame = 1
Query: 1 CTTSTNPSYSLVSCERTGLDRDGRLLGCSASENCLSTSAVKVPGKLGSPWEYSRQTEDADRAFATLVRAVEGTSEATM---KTIDIKRHYLLAQFPSKVPPGSVDSVEFLVKPDDQIVLYRAVSRDTLFLYPLQQPVSDQGKLKERLEGIRKELGW 459
C T++NP ++ +C R GL +GRL C A ENC+STS+V+ K PW+Y+ +T + DRA+ +L A+ T + + + +R YL PS VPP D +EF++ P +++V +R+ SR ++FL+PLQQPVSD G+ RL+ +R LGW
Sbjct: 74 CRTTSNPFFTTKTCYRVGLV-EGRLGKCLADENCMSTSSVQSASKYSPPWDYTPETLNPDRAWKSLKLALLQTIQGARVEAEDVSTERLYLHVTAPSAVPPAGTDDLEFVLDPKEKLVFFRSASRSSVFLFPLQQPVSDNGRHLSRLQNVRSTLGW 228
BLAST of mRNA_H-canaliculatus_F_contig150.3764.1 vs. uniprot
Match: A0A8J2WE71_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WE71_9STRA) HSP 1 Score: 129 bits (323), Expect = 3.680e-30 Identity = 68/170 (40.00%), Postives = 97/170 (57.06%), Query Frame = 1
Query: 1 CTTSTNPSYSLVSCERTGLDRDGRLLGCSASENCLSTSAVKVPGKLGSPWEYSRQTEDADRAFATLVRAVEGTSEATMKTIDIKRHYLLAQFPSKVP---PGSVDSVEFLVKPDDQIVLYRAVSRDTLFLYPLQQ----PVSDQGKLKERLEGIRKELGWSMYTYRGE*E 489
C T Y+ +CER G+ +DGRL GC SENC+S+SA+K P + +PW +S T DADRAF LV+A + + + + D R YL A PS++ VD VE L+ + +V +R+ SR+++F +P Q P+ D G + RLE +RK LGW R E E
Sbjct: 89 CRTKPGALYAERTCERYGIQKDGRLAGCLPSENCVSSSAIKSPAQFDAPWLFSPATRDADRAFEELVKAAQASPDLKIAETDPARRYLRATAPSQISNYKATDVDDVEVLISAEKGLVFHRSASRESVFFFPPQNIYSVPLGDNGSNRGRLEALRKALGWESTNPRPEDE 258
BLAST of mRNA_H-canaliculatus_F_contig150.3764.1 vs. uniprot
Match: A0A7S2N0F5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N0F5_9STRA) HSP 1 Score: 129 bits (324), Expect = 5.320e-30 Identity = 70/161 (43.48%), Postives = 101/161 (62.73%), Query Frame = 1
Query: 1 CTTSTNPSYSLVSC--ERTGLDRDGRLLGCSASENCLSTSAVKVPGKLGSPWEYSRQTEDADRAFATLVRAVEGTSEA-TMKTIDIKRHYLLAQFPSKVPPG-----SVDSVEFLVKPDDQIVLYRAVSRDTLFLYPLQQPVSDQGKLKERLEGIRKELGW 459
CTT+TNPS + V+C E + DGRL SA+EN +STS+V+ P + PW Y +T DA A+ +LV AV T++ +++ YL A P+ PPG +D +EFL++P+D +VLYR+ SR ++F+YPL QPVSD+ +RL+ IR LGW
Sbjct: 129 CTTTTNPSTTTVTCTGELRANNADGRLSKISATENGVSTSSVRNPSRFSPPWTYLTETSDARVAWKSLVSAVNRVEPGGTLQIVELTDSYLHATVPTVSPPGLLGEAGLDDIEFLLRPEDNLVLYRSASRTSVFVYPLTQPVSDRNSNLKRLQKIRSILGW 289 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig150.3764.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig150.3764.1 >prot_H-canaliculatus_F_contig150.3764.1 ID=prot_H-canaliculatus_F_contig150.3764.1|Name=mRNA_H-canaliculatus_F_contig150.3764.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=85bp MKTIDIKRHYLLAQFPSKVPPGSVDSVEFLVKPDDQIVLYRAVSRDTLFLback to top mRNA from alignment at H-canaliculatus_F_contig150:10590..16291- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig150.3764.1 ID=mRNA_H-canaliculatus_F_contig150.3764.1|Name=mRNA_H-canaliculatus_F_contig150.3764.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5702bp|location=Sequence derived from alignment at H-canaliculatus_F_contig150:10590..16291- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig150:10590..16291- >mRNA_H-canaliculatus_F_contig150.3764.1 ID=mRNA_H-canaliculatus_F_contig150.3764.1|Name=mRNA_H-canaliculatus_F_contig150.3764.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=510bp|location=Sequence derived from alignment at H-canaliculatus_F_contig150:10590..16291- (Hapterophycus canaliculatus Oshoro5f female)back to top |