mRNA_H-canaliculatus_F_contig149.3697.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig149.3697.1
Unique NamemRNA_H-canaliculatus_F_contig149.3697.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig149.3697.1 vs. uniprot
Match: D8LJ09_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ09_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 2.020e-16
Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = 1 
Query:    1 MVDKKPEKKQECVQVVVRCRPFSTKEKKENRGHIIGIETALFQ 129
            MVDKKPEKKQECVQVVVRCRPFSTKEK ENRG IIG+ETALFQ
Sbjct:    1 MVDKKPEKKQECVQVVVRCRPFSTKEKNENRGGIIGMETALFQ 43
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig149.3697.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJ09_ECTSI2.020e-1693.02Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig149contigH-canaliculatus_F_contig149:22896..23027 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score82.0
Seed ortholog evalue7.5e-14
Seed eggNOG ortholog2880.D8LJ09
Preferred nameKIF17
KEGG koko:K10394,ko:K20198
KEGG Pathwayko04340,map04340
GOsGO:0002119,GO:0002164,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005815,GO:0005856,GO:0005871,GO:0005875,GO:0005929,GO:0006810,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0007275,GO:0008150,GO:0008569,GO:0008574,GO:0009791,GO:0009966,GO:0009987,GO:0010638,GO:0010639,GO:0010646,GO:0010970,GO:0015630,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0022611,GO:0023051,GO:0030030,GO:0030031,GO:0030705,GO:0031344,GO:0031345,GO:0031346,GO:0031503,GO:0032501,GO:0032502,GO:0032991,GO:0033043,GO:0035720,GO:0036064,GO:0036477,GO:0040024,GO:0042073,GO:0042623,GO:0042995,GO:0043005,GO:0043025,GO:0043053,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044087,GO:0044089,GO:0044297,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0045724,GO:0046626,GO:0046907,GO:0048471,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048580,GO:0048582,GO:0048583,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051641,GO:0051649,GO:0055115,GO:0060271,GO:0060491,GO:0061062,GO:0061063,GO:0061065,GO:0061066,GO:0065007,GO:0070925,GO:0071840,GO:0097458,GO:0097730,GO:0099111,GO:0120025,GO:0120031,GO:0120032,GO:0120033,GO:0120034,GO:0120035,GO:0120036,GO:0120038,GO:1900076,GO:1902017,GO:1902018,GO:1902115,GO:1902116,GO:1902117,GO:1902855,GO:1902856,GO:1902857,GO:1905515,GO:1990939,GO:2000026
EggNOG free text desc.microtubule motor activity
EggNOG OGsCOG5059@1,KOG4280@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04812
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Model size133
Cds size132
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929231.6748393-CDS-H-canaliculatus_F_contig149:22895..230271622929231.6748393-CDS-H-canaliculatus_F_contig149:22895..23027Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig149 22896..23027 +
1696845727.5512333-CDS-H-canaliculatus_F_contig149:22895..230271696845727.5512333-CDS-H-canaliculatus_F_contig149:22895..23027Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig149 22896..23027 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig149.3697.1prot_H-canaliculatus_F_contig149.3697.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig149 22896..23027 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig149.3697.1

>prot_H-canaliculatus_F_contig149.3697.1 ID=prot_H-canaliculatus_F_contig149.3697.1|Name=mRNA_H-canaliculatus_F_contig149.3697.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=44bp
MVDKKPEKKQECVQVVVRCRPFSTKEKKENRGHIIGIETALFQA
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mRNA from alignment at H-canaliculatus_F_contig149:22896..23027+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig149.3697.1 ID=mRNA_H-canaliculatus_F_contig149.3697.1|Name=mRNA_H-canaliculatus_F_contig149.3697.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=132bp|location=Sequence derived from alignment at H-canaliculatus_F_contig149:22896..23027+ (Hapterophycus canaliculatus Oshoro5f female)
ATGGTAGACAAGAAACCCGAGAAAAAACAGGAATGCGTTCAGGTTGTTGT
ACGATGTCGGCCGTTCAGCACGAAGGAGAAAAAGGAGAATCGCGGACATA
TCATCGGAATAGAGACTGCACTATTCCAGGCA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig149:22896..23027+

>mRNA_H-canaliculatus_F_contig149.3697.1 ID=mRNA_H-canaliculatus_F_contig149.3697.1|Name=mRNA_H-canaliculatus_F_contig149.3697.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=264bp|location=Sequence derived from alignment at H-canaliculatus_F_contig149:22896..23027+ (Hapterophycus canaliculatus Oshoro5f female)
ATGGTAGACAAGAAACCCGAGAAAAAACAGGAATGCGTTCAGGTTGTTGT
ACGATGTCGGCCGTTCAGCACGAAGGAGAAAAAGGAGAATCGCGGACATA
TCATCGGAATAGAGACTGCACTATTCCAGGCAATGGTAGACAAGAAACCC
GAGAAAAAACAGGAATGCGTTCAGGTTGTTGTACGATGTCGGCCGTTCAG
CACGAAGGAGAAAAAGGAGAATCGCGGACATATCATCGGAATAGAGACTG
CACTATTCCAGGCA
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