mRNA_H-canaliculatus_F_contig1487.3679.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1487.3679.1 vs. uniprot
Match: D7FWR6_ECTSI (Putative 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR6_ECTSI) HSP 1 Score: 563 bits (1451), Expect = 1.100e-161 Identity = 669/1421 (47.08%), Postives = 749/1421 (52.71%), Query Frame = 1
Query: 1 FVQSLEKAEMDMDRDLAARAEESRLAVELKEQWQRKIKGIAHDILRKWWAVGGHSGSAVGAVDGAERSSWKDLLTDDVVAMAPVEDGGAFSFAGGGGLEP------------VSVRAPXXXXXRAVERRLEGPLAVQGEAERLRVMTEILGQQTAAGNVKLELELHVDYWALGERELMCQWRVATRNADMCGGRRDLEARGMMALRLWTSEDGEAPSVEPKTKSSTWSILCSPPLPLGATGALPPXXXXXXXXXXXXXXXXXXXXXXXQSKLVGTTEPFQGRKERTEGATLQDGGTDHGDEKRGPVATVGAALAPAPAVPGAEVASLPPSPLRSAAPAQASAPLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAGGAAKSVDMAAARGGEGAGGAAEGGGALGCIARSHGGPDSTPSTAGISDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEDSSSWSSYXXXXXXXXXXXXXXXXXXXXXXXXKVVGVPRQAKARLVHISYDHCTFIRDLEESFGREILPVPRTLEQANLPRIRGVSRSPAALAAXXXXXXXXXXXXXXXXXXXXXXXPAP-----RIEELIKGAGGAGGDIDGVRWSGGGALSKEPGGGVSVSGXXXXXXXXXXXXXXXXXXXGGIATNGD---MTPCSFDTVQALAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEELMCAVTSFGKDGQFWIRHQDEGEENPEDADCLRGRQLCLAICFWRRSGRRRGRPRAVRFAGAEPGGGGREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGILLGSPSSHRDEDEMQRERFREIAQATERGIPSWVPVSILAADGTETPAYAAVYPLRCCTPS------AGGGGGDYVVGCGDGGGVRSCAVGTGXXXXXXXXDGLCGSGGRPGRSVQTEKEGGAPQRCGG-SGGSEARGEGGQPPGIHHALWEFHCVDRSTCLSMARLVEKLMAFMLLRVKEAMVEPAHTNSFVLKDLALLLGQSSXXXXXXXXXXXXXXXXXRGDEDEDHK-------PSGTGGDAFKGKRK---------------ARRKSSKDDGIGPAVGGGGIAINSSSSGVEDACDRRRAASSMEQLWRVYASVSHRELQFQSTSGMFKTEKGISGTDSVRSPRHAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKIIRRFFCETRRGVATQLLFHILEGCEDHPALGKVVEEFLWSSWSLHDDEQVIRLMSEATKLQQAGSFDRSNAAIEKVLEIDGGHFEALNCRAXXXXXXXXXXXXXXXXXXXXXXXXXXXGAMRGLGLLRMKLKDYSGALGAFELTAKINPMLLPGLRDNMAVCQAAGNAMMS 4116
FV+SLEKA+ M+RDLAARA+E RLA E+KE+WQ+K++GIA DILRKWWAVGG G +VG D SWK+LLT+DV V RAP RAVERRL GPLAV+GEAERLRV+TE LGQQTAAGN+KL+ ELHVD+WA GERELMCQWRV TRN +CGGRR+LE RGMMALRLWTSEDGEAP VEPKTK+ST S+L GA XXXXXXXXXXXXXXXXXXXXXXX K+ GG HG XXXXXXXXXXX +GG +GG AG+ XXXXXXXXXX ED SSW++ KVVGVPRQA+AR+VHI YDH + +R++EESFG EI+PVPRTLEQA LPRIR R AA A PA R+EEL G G GG+ G SGGG ++ + GV +G A +G+ XXXXXXXXXXXXXXXXXXXXXXXXX EEL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++++E+QRE FR++AQATE+GIPSWVPV ++AADGTET AYAAVYPL + S A GG G GGG G XXXXXXX GSG R GR E G Q GG +GG ++ + I HALWEFHC+DRSTCLS+ARLVEKLMAFMLLR+KEA+++P +SFVL D ALLL QSSXXXXXXXXXXXXXXXXX PS A R S+ GGGI S + +A DR RA SSME+ WRVYASVSHRELQFQS GM E G G DS R G XXXXXXXXXXXXXX M IIRRFFCE RRG+ TQLLFHILEGCED LGKVV++FLWS W+LHD+EQV++LMSEATKLQ+AGSFDRSNAA++KVLEID GHFEALNCRAXXXXXXXXXXXXXXXXXXXXXXXXXXX +RGLGLLRM LKDYSGALGAFELTAKINPMLLPGLRDNMAVCQAA NAM+S
Sbjct: 861 FVESLEKAKTAMERDLAARAQEDRLASEIKEKWQQKMQGIARDILRKWWAVGGPGGGSVG--DDKNTVSWKELLTEDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVVARAP-----RAVERRLVGPLAVEGEAERLRVLTETLGQQTAAGNIKLKFELHVDHWAFGERELMCQWRVFTRNVGVCGGRRELETRGMMALRLWTSEDGEAPVVEPKTKAST-SLLAM------EAGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXKVEAR------------------GGVRHGHXXX---------------------------------------------------------------------XXXXXXXXXXXKRSGG--------------------DGG-------------------AGVPPXXXXXXXXXXXDAPWLNTPRHERDGSGGGS----------------GEDVSSWTA-----RWRELYGTGKATDEPPSSLDKVVGVPRQARARIVHILYDHGSLVREVEESFGMEIIPVPRTLEQAKLPRIR---RRLAATATAGSSPSACSTREIAKNGEATAAAPAAKAETDRVEELDSGDGSGGGEKLGGG-SGGGPVAVDAKDGVEANGVDVE------------------AASGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAAGQGEGGCDGLADEESRGEELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEDEEVQRELFRKVAQATEQGIPSWVPVCVVAADGTETRAYAAVYPLTSTSSSFSPLAPARDVGGKAASG--SGGGHTGGDGAAGDXXXXXXXXXKIGSGAR-GRDPDALTEEG--QAGGGHNGGRDSISSDREGVRIRHALWEFHCIDRSTCLSVARLVEKLMAFMLLRIKEALLDPTCADSFVLNDFALLLKQSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXADRSSNN-------ANGGGIR-----SSLGNARDRMRAVSSMEKFWRVYASVSHRELQFQS-GGMRTKENGFLGVDSASRSRSGGSRTRXXXXXXXXXXXXXXTPASRPKRTLGNIEEETTHLL----MHIIRRFFCEARRGIVTQLLFHILEGCEDDLELGKVVQDFLWSCWNLHDNEQVVKLMSEATKLQEAGSFDRSNAAVDKVLEIDSGHFEALNCRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGLGLLRMNLKDYSGALGAFELTAKINPMLLPGLRDNMAVCQAAANAMLS 2067
BLAST of mRNA_H-canaliculatus_F_contig1487.3679.1 vs. uniprot
Match: A0A6H5JDT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDT9_9PHAE) HSP 1 Score: 372 bits (954), Expect = 6.900e-103 Identity = 511/1273 (40.14%), Postives = 584/1273 (45.88%), Query Frame = 1
Query: 85 LKEQWQRKIKGIAHDILRKWWAVGGHSGSAVGAVDGAERS--SWKDLLTDDVVAMAPVEDGGA-FSFAGGGGLEPVSVRAPXXXXX------RAVERRLEGPLAVQGEAERLRVMTEILGQQTAAGNVKLELELHVDYWALGERELMCQWRVATRNADMCGGRRDLEARGMMALRLWTSEDGEAPSVEPKTKSSTWSILCSPPLPLGATGALPPXXXXXXXXXXXXXXXXXXXXXXXQSKLVGTTEPF-QGRKERTEGATLQDGGTDHGDEKRGPVATVGAALAPAPAVPG-AEVASLPPSPL-----------RSAAPAQASAPLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAGGAAKSVDMAAARGGEGAGGAAEGGGALGCIARSHGGPDSTPS----TAGISDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEDSSSWSSYXXXXXXXXXXXXXXXXXXXXXXXXKVVGVPRQAKARLVHISYDHCTFIRDLEESFGREILPVPRTLEQANLPRIRG-------VSRSPAALAAXXXXXXXXXXXXXXXXXXXXXXXPAPRIEELIKGAGGAGGDIDGVRWSGGG-ALSKEPGGGVSVSGXXXXXXXXXXXXXXXXXXXGGIATNGDMTPCSFDTVQALAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEELMCAVTSFGKDGQFWIRHQDE----------------------------------------------GEENPEDADCLRGRQLCLAICFWRRSGRRRGRPRAVRFAGAEPGGGGR----------EGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGI----------------------------LLGSPSSHRDEDEMQRERFREIAQATERGIPSWVPVSILAADGTETPAYAAVYPLRCCTPS---------------AGGGGGDYVVGCGDGGGVRSCAVGTGXXXXXXXXDGLCGSGGRPGRSVQTEKEGGAPQRCGGSGGSEARGEGGQPPGIHHALWEFHCVDRSTCLSMARLVEKLMAFMLLRVKEAMVEPAHTNSFVLKDLALLLGQSSXXXXXXXXXXXXXXXXXRGDEDED------HKPSGTGGDAFKGKRKARRKSSKDDGIGPAV-------------------------------GGGGIAINSSSSGVEDACDRRRAASSMEQLWRVYASVSHRELQFQS 3393
+K Q + + +GIA DILRKWWAVGG ++S SWK+LLT+DVV MAPVE+GG+ S GGG E V RAVERRL GPLAV+GEAERLRV+TE LGQQTAAGN+KL+ +LHVD+WA GERELMCQWRV TRNA +CGGRR+LE RGMMALRLWTSEDGEAP VEPKTK+STW+IL SP XXXXXXXXXXXXXXXXXXXXXXX Q R R+ A APA V G A+ L + L+ XXXXXXXXXXXXXXXXXXX XXXXXXXXX ARGG + HGGP+S P A SDS S D SSW++ KVVGVPRQA+AR+VHI YDH + +R++EESFG EI+PVPRTLEQA LPRIR V SPAA + R+EEL G GG A+ E G + + XXXXXXXXXXXX +A+AAA EELMCAVTSFG+DGQF I GEE EDAD LRGR+L LA+ FW RSG R E XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TG+ LLGSPSS ++++EMQRE FR++AQATE+GIPSWVPV ++A DGTET AYAAVYPL + S +G GGG + VG DG S A G XXXX G TE+ G S R EG + IHHALWEFHC+DRSTCLS+A LVEKLMAFMLLR+KEA+++P +SFVL DLALLL QSSXXXXXXXXXXX GD+D H+P A KG GGGI + + +A DR RA SSME+ WRVYASVSHRELQFQS
Sbjct: 5 MKAQMRARAQGIARDILRKWWAVGGPGXXXXXXXXXXDKSTLSWKELLTEDVVMMAPVEEGGSPDSTCSGGGKEGVVQDTAAVGGLVVATAPRAVERRLVGPLAVEGEAERLRVLTETLGQQTAAGNLKLKFQLHVDHWAFGERELMCQWRVFTRNAGVCGGRRELETRGMMALRLWTSEDGEAPVVEPKTKTSTWAILGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVHASAQDRVSRSXXXXXXXXXXXXXXXXXXXXXXXXXA-APADEVAGSADTXXXXXXXLGXXXXXXXXXXXXXXXXXXXSSLAAXXXXXXXXXXXXXXXXXXXGVKRSRLEMEXXXXXXXXXXXXXXXXXXXKVEARGG---------------VRHGHGGPNSAPGGGSGRAKRSDSDVGADIPRLQQDDVEEDAPWLNIPRHERDGSGGG-----------SGDISSWTA-----RWREMYGIGKATDEPSSSLDKVVGVPRQARARIVHILYDHDSLVREVEESFGIEIIPVPRTLEQAKLPRIRRRLAATATVGSSPAACSTREVAKNGQAAPATAATAPAAKAG-TDRVEELGSGDGGXXXXXXXXXXXXXPVAVDAEDGVEANNADVEASGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXAPEAIAAAPGESDASDQAEGGCDGLADEESRG---------------------EELMCAVTSFGQDGQFRIVRASRALCDRTRASARRXXXXXXTQPEQAKDLERALPLQXXXXXXXXXXXXGEETSEDADYLRGRELGLAVRFWGRSGGRXXXXXXXXXXXXXXXXXXXXXXXXDTATLEERVAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCARRSTGVGRDEPAERGRGDVVAMAGSERSVVGGGVLLGSPSSAQEDEEMQRELFRKVAQATEQGIPSWVPVGVVAVDGTETRAYAAVYPLTSTSSSFSPLAPARAVGGNASSGRGGGGHAVG--DGAAGDSAAAGDDGGKIXXXXX-------XRGPDALTEEGQXXXXXXXGDDSSSDR-EGMR---IHHALWEFHCIDRSTCLSVALLVEKLMAFMLLRIKEALLDPTCADSFVLNDLALLLNQSSXXXXXXXXXXXEG-----GDKDXXXXXXXXHEPGAVPSGATKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDSGGGIRGS-----LGNARDRMRAVSSMEKFWRVYASVSHRELQFQS 1200
BLAST of mRNA_H-canaliculatus_F_contig1487.3679.1 vs. uniprot
Match: A0A355Q467_9DELT (Uncharacterized protein n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A355Q467_9DELT) HSP 1 Score: 61.6 bits (148), Expect = 1.130e-6 Identity = 41/150 (27.33%), Postives = 66/150 (44.00%), Query Frame = 1
Query: 3652 LFHILEGCEDHPALGKVVEEFLWSSWSLHDDEQVIRLMSEATKLQQAGSFDRSNAAIEKVLEIDGGHFEALNCRAXXXXXXXXXXXXXXXXXXXXXXXXXXXGAMRGLGLLRMKLKDYSGALGAFELTAKINP------MLLPGLRDNMA 4083
LF L E +V+ +W+ W H D Q+ + M A+++ Q G ++ +++E G EA N RA GA+ GLG+++M+L+DYS AL +E KI+P +LP LR ++
Sbjct: 30 LFSQLAQAETSYTASPIVQN-IWTIWLKHPDSQLTQAMKAASEIMQNGDLKQAELLFTQLIEKAPGWAEAWNKRATVRYYRDNLIGSIADIKETLVLEPRHFGALSGLGMIQMRLQDYSEALSTYESLQKIHPNSQDVGRILPALRQQIS 178 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1487.3679.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1487.3679.1 >prot_H-canaliculatus_F_contig1487.3679.1 ID=prot_H-canaliculatus_F_contig1487.3679.1|Name=mRNA_H-canaliculatus_F_contig1487.3679.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=1364bp MDMDRDLAARAEESRLAVELKEQWQRKIKGIAHDILRKWWAVGGHSGSAVback to top mRNA from alignment at H-canaliculatus_F_contig1487:99..15641+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1487.3679.1 ID=mRNA_H-canaliculatus_F_contig1487.3679.1|Name=mRNA_H-canaliculatus_F_contig1487.3679.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=15543bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1487:99..15641+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1487:99..15641+ >mRNA_H-canaliculatus_F_contig1487.3679.1 ID=mRNA_H-canaliculatus_F_contig1487.3679.1|Name=mRNA_H-canaliculatus_F_contig1487.3679.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=8184bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1487:99..15641+ (Hapterophycus canaliculatus Oshoro5f female)back to top |