mRNA_H-canaliculatus_F_contig14830.3661.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig14830.3661.1
Unique NamemRNA_H-canaliculatus_F_contig14830.3661.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig14830.3661.1 vs. uniprot
Match: D8LRH4_ECTSI (Glutathione synthetase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRH4_ECTSI)

HSP 1 Score: 305 bits (780), Expect = 1.250e-99
Identity = 151/162 (93.21%), Postives = 156/162 (96.30%), Query Frame = 1
Query:    1 QVERFLGPTESNAVRRCFAGLYSVGPDGDAEATADAVAHPDRYVLKPQREGGGNNLYGPELKAKLSPGGATDDELRSFVLMQRIFPKTQPAVMVNRGQCVSGDSVSELGVYGTYLGGGEGKELLNEYAGYLVRTKMEGTDEGGVATGYAVLSSPIVGGGRGE 486
            QVERFLG +ES AVRRCFAGLYSVGPDGDA ATADAVAHPDRYVLKPQREGGGNNLYGPELK+KL  GGATDDELRSFVLMQRIFPKTQPAVMVNRG+CVSGDS+SELGVYGTYLGGGEGKELLNEYAGYLVRTKMEGTDEGGVATGYAVLSSPIVG GRG+
Sbjct:  348 QVERFLGASESAAVRRCFAGLYSVGPDGDAAATADAVAHPDRYVLKPQREGGGNNLYGPELKSKLDAGGATDDELRSFVLMQRIFPKTQPAVMVNRGKCVSGDSISELGVYGTYLGGGEGKELLNEYAGYLVRTKMEGTDEGGVATGYAVLSSPIVG-GRGK 508          
BLAST of mRNA_H-canaliculatus_F_contig14830.3661.1 vs. uniprot
Match: A0A7S2V226_9STRA (Glutathione synthetase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V226_9STRA)

HSP 1 Score: 160 bits (406), Expect = 3.070e-45
Identity = 87/161 (54.04%), Postives = 110/161 (68.32%), Query Frame = 1
Query:    1 QVERFLGPTESNA-VRRCFAGLYSVGPDGDAEATADAVAH----PDRYVLKPQREGGGNNLYGPELKAKLSPGGATDDELRSFVLMQRIFPKTQPAVMVNRGQCVSGDSVSELGVYGTYLGGGEGKELLNEYAGYLVRTKMEGTDEGGVATGYAVLSSPIV 468
            Q+ RFL   E    V   FA LY     G  ++T DAVA     P++YVLKPQREGGGNNLY  E+  +L+        L SF+LM+R FP+  PA+++ +GQ  +G +VSELG+YG +LG  EG+ LLNEYAGYL+RTK+EG  EGGVATGYAVLSSPI+
Sbjct:  197 QLYRFLPENEGGREVMETFARLYGFDAAGARQSTLDAVADAEKDPEKYVLKPQREGGGNNLYAEEMIGQLTSPELVKT-LPSFILMERFFPRPSPALLLRQGQVNAGLAVSELGIYGIFLGDAEGQVLLNEYAGYLLRTKLEGVKEGGVATGYAVLSSPIL 356          
BLAST of mRNA_H-canaliculatus_F_contig14830.3661.1 vs. uniprot
Match: A0A835Z3P5_9STRA (Glutathione synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3P5_9STRA)

HSP 1 Score: 158 bits (400), Expect = 3.560e-43
Identity = 89/160 (55.62%), Postives = 110/160 (68.75%), Query Frame = 1
Query:    1 QVERFLG---PTESNAVRRCFAGLYSVGPDGDAEATADAVAHPDRYVLKPQREGGGNNLYGPELKAKLSPGGATDDELRSFVLMQRIFPKTQPAVMVNRGQCVSGDSVSELGVYGTYLG-GGEGKELLNEYAGYLVRTKMEGTDEGGVATGYAVLSSPIV 468
            +VERFLG   P+ +  +R  FAGL++ G D DA   A   A P  +VLKPQREGGGNN+YG  L  KL    A   EL S+VLMQR+FP  Q A +V RG+  SG+++SE G Y  YLG GG    L+NEYAG+LVRTKM+G DEGGVATGY+ LSSP++
Sbjct:  337 EVERFLGSSDPSRTALLRESFAGLWA-GDDDDAARAA--AADPRGFVLKPQREGGGNNIYGAALAEKLR--AAPRAELASYVLMQRLFPPRQRATLVGRGRRTSGETLSEWGAYSVYLGTGGGAAPLVNEYAGHLVRTKMDGVDEGGVATGYSFLSSPVL 491          
BLAST of mRNA_H-canaliculatus_F_contig14830.3661.1 vs. uniprot
Match: A0A7S2FM90_9STRA (Glutathione synthetase n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FM90_9STRA)

HSP 1 Score: 158 bits (400), Expect = 5.460e-43
Identity = 83/162 (51.23%), Postives = 110/162 (67.90%), Query Frame = 1
Query:    1 QVERFLGPTESNAVRRCFAGLYSVGPDGDAE------ATADAVAHPDRYVLKPQREGGGNNLYGPELKAKLSPGGATDDELRSFVLMQRIFPKTQPAVMVNRGQCVSGDSVSELGVYGTYLGGGEGKELLNEYAGYLVRTKMEGTDEGGVATGYAVLSSPIV 468
            Q+ERFL PTE+  VR  F GL+ V  +          A  +A+ HP+RYVLKPQREGGGNNLYG EL  ++  G     +L   VLMQRI P  +PA  V +GQ   G S+SELGV+GT+L   + + ++N+YAG+++RTK +G DEGGVATGY+VLSSP++
Sbjct:  367 QLERFLDPTEAAEVRTSFVGLHLVSTESMESSSEAGLAVQEALMHPERYVLKPQREGGGNNLYGAELADRIRSGL----DLEDLVLMQRIMPPIEPAWFVRQGQVQRGMSLSELGVFGTFLAADD-RVVINQYAGHILRTKQDGVDEGGVATGYSVLSSPLL 523          
BLAST of mRNA_H-canaliculatus_F_contig14830.3661.1 vs. uniprot
Match: A0A7S1RY77_ALECA (Glutathione synthetase n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RY77_ALECA)

HSP 1 Score: 153 bits (387), Expect = 1.200e-41
Identity = 78/156 (50.00%), Postives = 104/156 (66.67%), Query Frame = 1
Query:    4 VERFLGPTESNAVRRCFAGLYSVGP-DGDAEATADAVAHPDRYVLKPQREGGGNNLYGPELKAKLSPGGATDDELRSFVLMQRIFPKTQPAVMVNRGQCVSGDSVSELGVYGTYLGGGEGKELLNEYAGYLVRTKMEGTDEGGVATGYAVLSSPIV 468
            +ERF+   ES  +R CFAGL+ +GP + DA    +A   P  YVLKPQREGGGNN YG +L AKL     + +E  +++LMQRI P+ Q +VM   GQ +    +SE G Y  +LG G  + L++++AG+LVRTK EG DEGGVA GYAV+SSP +
Sbjct:  291 LERFMNARESAKLRTCFAGLWGLGPGEDDASIIEEARGDPHAYVLKPQREGGGNNFYGQDLAAKLKE--LSSEERAAYILMQRILPRRQTSVMTRGGQAIVEPGLSEFGFYSVFLGDGR-RVLMSQHAGHLVRTKAEGVDEGGVAAGYAVISSPFL 443          
BLAST of mRNA_H-canaliculatus_F_contig14830.3661.1 vs. uniprot
Match: H3H115_PHYRM (Glutathione synthetase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H115_PHYRM)

HSP 1 Score: 154 bits (389), Expect = 1.960e-41
Identity = 78/157 (49.68%), Postives = 109/157 (69.43%), Query Frame = 1
Query:    4 VERFLGPTESNAVRRCFAGLYSVGPDGDA--EATADAVAHPDRYVLKPQREGGGNNLYGPELKAKLSPGGATDDELRSFVLMQRIFPKTQPAVMVNRGQCVSGDSVSELGVYGTYLGGGEGKELLNEYAGYLVRTKMEGTDEGGVATGYAVLSSPIV 468
            + RF+   E+  +   FAGLY +  +     +    A+A+P  YVLKPQREGGGNNLYG E+ + +     T  EL S++LM+RIFPK  PAV+V      SG ++SELG++ T L  GEGKEL+N++AG+L+RTK+ GTDEGGVATG++V+SSP++
Sbjct:  363 LRRFVSEEEAQQLETSFAGLYGLEKNSSTINDVKNMAIANPRSYVLKPQREGGGNNLYGDEVASTIQTMSPT--ELESYILMERIFPKENPAVLVRNSLTSSGPTISELGMFITSLFDGEGKELVNKHAGHLLRTKLSGTDEGGVATGFSVVSSPLL 517          
BLAST of mRNA_H-canaliculatus_F_contig14830.3661.1 vs. uniprot
Match: A0A6V2SZX3_EMIHU (Glutathione synthetase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A6V2SZX3_EMIHU)

HSP 1 Score: 155 bits (391), Expect = 2.150e-41
Identity = 83/168 (49.40%), Postives = 109/168 (64.88%), Query Frame = 1
Query:    1 QVERFLGPTESNAVRRCFAGLYSVGPDGD------------AEATADAVAHPDRYVLKPQREGGGNNLYGPELKAKLSPGGATDDELRSFVLMQRIFPKTQPAVMVNRGQCVSGDSVSELGVYGTYLGGGEGKELLNEYAGYLVRTKMEGTDEGGVATGYAVLSSPIV 468
            ++ERF+ P E+ A+RR FAGL+S+  D              AEA   A A P  YV+KPQREGGG+NL+G  L A L     +  +  +++LM+RI PK  PAV+V  G+   GD+VSELGVY TYL    G+ L++  AG+LVRTKM G DEGGVA+G+AVLSSP+ 
Sbjct:  406 ELERFVSPAEAEAMRRVFAGLWSLSGDKTPPDDAPPAEREAAEAMRAAAADPSEYVMKPQREGGGHNLFGATLAAALRE--LSRAQRSAYILMRRIEPKAAPAVLVRAGEVYRGDAVSELGVYSTYLRSATGRVLISRPAGHLVRTKMRGVDEGGVASGFAVLSSPLA 571          
BLAST of mRNA_H-canaliculatus_F_contig14830.3661.1 vs. uniprot
Match: A0A7J7QGK0_9CHLO (Glutathione synthetase n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QGK0_9CHLO)

HSP 1 Score: 155 bits (391), Expect = 2.370e-41
Identity = 81/159 (50.94%), Postives = 109/159 (68.55%), Query Frame = 1
Query:    4 VERFLGPTESNAVRRCFAGLYSVGPDGDAEATA---DAVAHPDRYVLKPQREGGGNNLYGPELKAKLSPGGAT-DDELRSFVLMQRIFPKTQPAVMVNRGQCVSGDSVSELGVYGTYLGGGEGKELLNEYAGYLVRTKMEGTDEGGVATGYAVLSSPIV 468
            VERF+G  +   +R+ FAGL+S+    +    A   DA+ +PDRYVLKPQREGGGNNLYGPEL A L  G  T  D L +++LMQRI P  Q ++ V  G+    +S+SELG+YGT+L  G+ K ++NE  G+LVRTK   ++EGGVA G+AVL SP++
Sbjct:  385 VERFMGQQQGAQLRQLFAGLWSLDSPSEPSTAAVIQDAIQNPDRYVLKPQREGGGNNLYGPELSAALQQGLQTAGDGLAAYILMQRIVPPPQRSMFVRAGEWAEDESLSELGIYGTFLRLGD-KVVVNEEVGHLVRTKTSSSNEGGVAAGFAVLDSPLL 542          
BLAST of mRNA_H-canaliculatus_F_contig14830.3661.1 vs. uniprot
Match: G4ZGH2_PHYSP (Glutathione synthetase n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZGH2_PHYSP)

HSP 1 Score: 152 bits (384), Expect = 9.520e-41
Identity = 79/160 (49.38%), Postives = 109/160 (68.12%), Query Frame = 1
Query:    4 VERFLGPTESNAVRRCFAGLYSVGPDGDA--EATADAVAHPDRYVLKPQREGGGNNLYGPELKA---KLSPGGATDDELRSFVLMQRIFPKTQPAVMVNRGQCVSGDSVSELGVYGTYLGGGEGKELLNEYAGYLVRTKMEGTDEGGVATGYAVLSSPIV 468
            + RF+   E+  +   FAGLY +  D     +    A A+P  YVLKPQREGGGNNLYG E+ +   K+SP      EL S++LM+RIFPK  PAV+V      SG ++SELG++ T L   EGKE++N++AG+L+RTK+ GTDEGGVATG++V+SSP++
Sbjct:  357 LRRFMSEDEAKLLETSFAGLYGLEKDSATIEDVKKMATANPRSYVLKPQREGGGNNLYGDEVASAIQKMSPA-----ELESYILMERIFPKENPAVLVRNSLTSSGSTISELGMFITSLFDAEGKEIVNKHAGHLLRTKLSGTDEGGVATGFSVVSSPLL 511          
BLAST of mRNA_H-canaliculatus_F_contig14830.3661.1 vs. uniprot
Match: A0A7S2RJR4_9STRA (Glutathione synthetase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJR4_9STRA)

HSP 1 Score: 152 bits (384), Expect = 1.080e-40
Identity = 87/174 (50.00%), Postives = 111/174 (63.79%), Query Frame = 1
Query:    1 QVERFLGPTESNAVRRCFAGLYSVGP-DGDAEATA---DAVAHPDRYVLKPQREGGGNNLYGPELKAKLSPGGATDDE---------LRSFVLMQRIFPKTQPAVMVNRGQCVSGDSVSELGVYGTYL-----GGGEGKELLNEYAGYLVRTKMEGTDEGGVATGYAVLSSPIV 468
            +VERFL   E++AVR  FA L+ +   +  AEA A   DA  HP+R+VLKPQREGGGNN YG  L+ KL        E         L   +LMQRI P  QPAV+V RG+   G ++SE GV+GT+L     G  E +  +NEY G+++RTK++G DEGGVATGYAVLSSP+V
Sbjct:  347 EVERFLTADEASAVRESFAALHPMSTAEMGAEAWAALEDAKEHPERFVLKPQREGGGNNFYGDALRDKLIEAFPAAGEANVTAGHKGLPELILMQRIMPDLQPAVLVVRGKSTQGQTLSEFGVFGTFLAVEDEGASEPRIEVNEYGGHILRTKLDGVDEGGVATGYAVLSSPMV 520          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14830.3661.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRH4_ECTSI1.250e-9993.21Glutathione synthetase n=2 Tax=Ectocarpus TaxID=28... [more]
A0A7S2V226_9STRA3.070e-4554.04Glutathione synthetase n=1 Tax=Fibrocapsa japonica... [more]
A0A835Z3P5_9STRA3.560e-4355.63Glutathione synthetase n=1 Tax=Tribonema minus Tax... [more]
A0A7S2FM90_9STRA5.460e-4351.23Glutathione synthetase n=2 Tax=Dictyocha speculum ... [more]
A0A7S1RY77_ALECA1.200e-4150.00Glutathione synthetase n=1 Tax=Alexandrium catenel... [more]
H3H115_PHYRM1.960e-4149.68Glutathione synthetase n=1 Tax=Phytophthora ramoru... [more]
A0A6V2SZX3_EMIHU2.150e-4149.40Glutathione synthetase n=2 Tax=Emiliania huxleyi T... [more]
A0A7J7QGK0_9CHLO2.370e-4150.94Glutathione synthetase n=1 Tax=Scenedesmus sp. NRE... [more]
G4ZGH2_PHYSP9.520e-4149.38Glutathione synthetase n=4 Tax=Phytophthora TaxID=... [more]
A0A7S2RJR4_9STRA1.080e-4050.00Glutathione synthetase n=1 Tax=Rhizochromulina mar... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14830contigH-canaliculatus_F_contig14830:90..581 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score300.8
Seed ortholog evalue3.8e-79
Seed eggNOG ortholog2880.D8LRH4
Preferred nameGSS
KEGG rclassRC00064,RC00090,RC00096,RC00141,RC00162
KEGG koko:K01930,ko:K03539,ko:K18195,ko:K21456
KEGG ReactionR00497,R00942,R02237,R04241,R10994
KEGG Pathwayko00270,ko00480,ko00790,ko01100,ko01523,ko03008,ko03013,ko04216,map00270,map00480,map00790,map01100,map01523,map03008,map03013,map04216
KEGG ModuleM00118
GOsGO:0000166,GO:0000287,GO:0001101,GO:0003674,GO:0003824,GO:0004363,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006518,GO:0006520,GO:0006575,GO:0006749,GO:0006750,GO:0006790,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006857,GO:0006950,GO:0006974,GO:0006979,GO:0007275,GO:0007399,GO:0007568,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009410,GO:0009605,GO:0009636,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010243,GO:0015711,GO:0015833,GO:0016594,GO:0016597,GO:0016874,GO:0016879,GO:0016881,GO:0017076,GO:0019184,GO:0019748,GO:0019752,GO:0030554,GO:0031406,GO:0031667,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033218,GO:0033554,GO:0034097,GO:0034612,GO:0034635,GO:0034641,GO:0035639,GO:0036087,GO:0036094,GO:0042165,GO:0042221,GO:0042277,GO:0042398,GO:0042493,GO:0042802,GO:0042803,GO:0042886,GO:0042939,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043200,GO:0043295,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0045471,GO:0046677,GO:0046685,GO:0046686,GO:0046872,GO:0046937,GO:0046938,GO:0046983,GO:0048037,GO:0048731,GO:0048856,GO:0050896,GO:0051179,GO:0051181,GO:0051186,GO:0051188,GO:0051234,GO:0051716,GO:0061687,GO:0070887,GO:0071241,GO:0071248,GO:0071276,GO:0071585,GO:0071702,GO:0071704,GO:0071705,GO:0071722,GO:0072337,GO:0072341,GO:0072348,GO:0090423,GO:0097159,GO:0097237,GO:0097305,GO:0097367,GO:0097501,GO:0098754,GO:0098849,GO:1900750,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681,GO:1901698,GO:1901700,GO:1902494,GO:1990170,GO:1990748
EggNOG free text desc.glutathione synthase activity
EggNOG OGsKOG0021@1,KOG0021@2759
EC3.1.26.5,4.2.2.23,6.3.2.17,6.3.2.3
COG Functional cat.H
CAZyPL4
BiGG ReactioniMM904.YOL049W,iND750.YOL049W
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03009,ko03016,ko03029,ko04147
Hectar predicted targeting categoryother localisation
Exons1
Model size492
Cds size492
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929227.1726975-CDS-H-canaliculatus_F_contig14830:89..5811622929227.1726975-CDS-H-canaliculatus_F_contig14830:89..581Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14830 90..581 +
1696845725.7024138-CDS-H-canaliculatus_F_contig14830:89..5811696845725.7024138-CDS-H-canaliculatus_F_contig14830:89..581Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14830 90..581 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14830.3661.1prot_H-canaliculatus_F_contig14830.3661.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig14830 90..581 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig14830.3661.1

>prot_H-canaliculatus_F_contig14830.3661.1 ID=prot_H-canaliculatus_F_contig14830.3661.1|Name=mRNA_H-canaliculatus_F_contig14830.3661.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=164bp
QVERFLGPTESNAVRRCFAGLYSVGPDGDAEATADAVAHPDRYVLKPQRE
GGGNNLYGPELKAKLSPGGATDDELRSFVLMQRIFPKTQPAVMVNRGQCV
SGDSVSELGVYGTYLGGGEGKELLNEYAGYLVRTKMEGTDEGGVATGYAV
LSSPIVGGGRGED*
back to top

mRNA from alignment at H-canaliculatus_F_contig14830:90..581+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig14830.3661.1 ID=mRNA_H-canaliculatus_F_contig14830.3661.1|Name=mRNA_H-canaliculatus_F_contig14830.3661.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=492bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14830:90..581+ (Hapterophycus canaliculatus Oshoro5f female)
CAGGTTGAGCGTTTCCTCGGGCCGACCGAGAGCAATGCCGTGCGTCGTTG CTTCGCCGGCCTTTACTCCGTCGGCCCCGACGGCGACGCAGAGGCGACTG CGGACGCCGTCGCCCACCCAGACCGCTACGTCCTCAAGCCGCAGCGTGAG GGCGGGGGCAACAACCTCTATGGGCCGGAGCTCAAGGCCAAGCTGAGCCC CGGCGGCGCCACGGACGACGAGCTCCGCAGCTTCGTCCTTATGCAGAGGA TCTTCCCGAAGACGCAGCCCGCCGTGATGGTGAACCGTGGGCAGTGCGTG TCCGGGGACTCCGTCAGCGAGCTCGGGGTGTACGGGACGTATCTGGGGGG CGGGGAAGGCAAGGAGCTGCTGAACGAATACGCGGGGTATCTCGTCCGGA CGAAGATGGAGGGGACGGACGAGGGCGGAGTGGCCACCGGTTACGCCGTG TTGAGCTCGCCCATCGTCGGCGGTGGGCGAGGGGAGGATTGA
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14830:90..581+

>mRNA_H-canaliculatus_F_contig14830.3661.1 ID=mRNA_H-canaliculatus_F_contig14830.3661.1|Name=mRNA_H-canaliculatus_F_contig14830.3661.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=984bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14830:90..581+ (Hapterophycus canaliculatus Oshoro5f female)
CAGGTTGAGCGTTTCCTCGGGCCGACCGAGAGCAATGCCGTGCGTCGTTG
CTTCGCCGGCCTTTACTCCGTCGGCCCCGACGGCGACGCAGAGGCGACTG
CGGACGCCGTCGCCCACCCAGACCGCTACGTCCTCAAGCCGCAGCGTGAG
GGCGGGGGCAACAACCTCTATGGGCCGGAGCTCAAGGCCAAGCTGAGCCC
CGGCGGCGCCACGGACGACGAGCTCCGCAGCTTCGTCCTTATGCAGAGGA
TCTTCCCGAAGACGCAGCCCGCCGTGATGGTGAACCGTGGGCAGTGCGTG
TCCGGGGACTCCGTCAGCGAGCTCGGGGTGTACGGGACGTATCTGGGGGG
CGGGGAAGGCAAGGAGCTGCTGAACGAATACGCGGGGTATCTCGTCCGGA
CGAAGATGGAGGGGACGGACGAGGGCGGAGTGGCCACCGGTTACGCCGTG
TTGAGCTCGCCCATCGTCGGCGGTGGGCGAGGGGAGGATTGACAGGTTGA
GCGTTTCCTCGGGCCGACCGAGAGCAATGCCGTGCGTCGTTGCTTCGCCG
GCCTTTACTCCGTCGGCCCCGACGGCGACGCAGAGGCGACTGCGGACGCC
GTCGCCCACCCAGACCGCTACGTCCTCAAGCCGCAGCGTGAGGGCGGGGG
CAACAACCTCTATGGGCCGGAGCTCAAGGCCAAGCTGAGCCCCGGCGGCG
CCACGGACGACGAGCTCCGCAGCTTCGTCCTTATGCAGAGGATCTTCCCG
AAGACGCAGCCCGCCGTGATGGTGAACCGTGGGCAGTGCGTGTCCGGGGA
CTCCGTCAGCGAGCTCGGGGTGTACGGGACGTATCTGGGGGGCGGGGAAG
GCAAGGAGCTGCTGAACGAATACGCGGGGTATCTCGTCCGGACGAAGATG
GAGGGGACGGACGAGGGCGGAGTGGCCACCGGTTACGCCGTGTTGAGCTC
GCCCATCGTCGGCGGTGGGCGAGGGGAGGATTGA
back to top