mRNA_H-canaliculatus_F_contig14780.3632.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14780.3632.1 vs. uniprot
Match: D8LGF1_ECTSI (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGF1_ECTSI) HSP 1 Score: 216 bits (551), Expect = 4.890e-70 Identity = 115/130 (88.46%), Postives = 121/130 (93.08%), Query Frame = 1
Query: 1 QEDFKTHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRANSLTAENKRRTLQRNDIASAVSKTDTYDFLIDIVPRDELKKDDAGHAAAAAVEMDAHQQMSILAMQHALGQQM 390
+EDFK HELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRANSLTAENKRRTLQRNDIA AVSKTDTYDFLIDIVPR+ELKKDD GHAAA V+ +A QQM ++AMQHALGQ M
Sbjct: 45 KEDFKNHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRANSLTAENKRRTLQRNDIAMAVSKTDTYDFLIDIVPREELKKDDVGHAAA--VDQEAQQQMHLMAMQHALGQHM 172
BLAST of mRNA_H-canaliculatus_F_contig14780.3632.1 vs. uniprot
Match: A0A6H5KYW5_9PHAE (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYW5_9PHAE) HSP 1 Score: 212 bits (539), Expect = 1.780e-66 Identity = 111/130 (85.38%), Postives = 119/130 (91.54%), Query Frame = 1
Query: 1 QEDFKTHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRANSLTAENKRRTLQRNDIASAVSKTDTYDFLIDIVPRDELKKDDAGHAAAAAVEMDAHQQMSILAMQHALGQQM 390
+EDFK HELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIF+LEMAMRANSLTAENKRRTLQRNDIA AVSKTDTYDFLIDIVPR+ELKKDD GHA A ++ DA QM ++AMQH+LGQ M
Sbjct: 45 KEDFKNHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFILEMAMRANSLTAENKRRTLQRNDIAMAVSKTDTYDFLIDIVPREELKKDDVGHATA--IDQDAQLQMHLMAMQHSLGQHM 172
BLAST of mRNA_H-canaliculatus_F_contig14780.3632.1 vs. uniprot
Match: A0A7S2CAV2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CAV2_9STRA) HSP 1 Score: 131 bits (330), Expect = 2.850e-35 Identity = 72/108 (66.67%), Postives = 83/108 (76.85%), Query Frame = 1
Query: 1 QEDFKTHELPLARIKKIMRLEDDIA-EAGAPRFMIAAEAPIIIAKACEIFVLEMAMRANSLTAENKRRTLQRNDIASAVSKTDTYDFLIDIVPRDELK---KDDAGHA 312
Q+D+ ELPLARIKKIM+ ED++ E G RFMI+AEAP++ AKACEIF LE+ M A + T ENKRRTLQRNDI AVSK DTYDFLIDIVPRD +K KDD G A
Sbjct: 52 QKDWSQPELPLARIKKIMKSEDEVKLELGGQRFMISAEAPVMFAKACEIFALELTMLAWNHTEENKRRTLQRNDIVMAVSKNDTYDFLIDIVPRDNVKPSKKDDVGSA 159
BLAST of mRNA_H-canaliculatus_F_contig14780.3632.1 vs. uniprot
Match: UPI00064DF350 (nuclear transcription factor Y subunit C-2 n=1 Tax=Erythranthe guttata TaxID=4155 RepID=UPI00064DF350) HSP 1 Score: 126 bits (317), Expect = 1.500e-34 Identity = 63/107 (58.88%), Postives = 84/107 (78.50%), Query Frame = 1
Query: 7 DFKTHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRANSLTAENKRRTLQRNDIASAVSKTDTYDFLIDIVPRDELKKDDAGHAAAAAV 327
DFK H LPLARIKKIM+ ++D+ MI+AEAP+I AKACE+F+LE+ +R+ T ENKRRTLQ+NDIA+A+S+TD +DFL+DI+PRDELK++ G +AAV
Sbjct: 57 DFKNHSLPLARIKKIMKADEDVR-------MISAEAPVIFAKACEMFILELTLRSWINTDENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGVTESAAV 156
BLAST of mRNA_H-canaliculatus_F_contig14780.3632.1 vs. uniprot
Match: A0A7S1TX78_9STRA (Hypothetical protein (Fragment) n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TX78_9STRA) HSP 1 Score: 129 bits (323), Expect = 3.030e-34 Identity = 69/101 (68.32%), Postives = 82/101 (81.19%), Query Frame = 1
Query: 1 QEDFKTHELPLARIKKIMRLEDDIAE--AGAP--RFMIAAEAPIIIAKACEIFVLEMAMRANSLTAENKRRTLQRNDIASAVSKTDTYDFLIDIVPRDELK 291
QEDFK+H LPLARIKKIM+ E++I AP RFMI+AEAPI+ AKACEIF+ E+ R+ T ENKRRTLQRNDI+ AVSKTDT+DFLIDIVPR+E+K
Sbjct: 14 QEDFKSHALPLARIKKIMKSEEEILNDAPNAPNSRFMISAEAPIMFAKACEIFIAELTTRSWGHTEENKRRTLQRNDISVAVSKTDTFDFLIDIVPREEIK 114
BLAST of mRNA_H-canaliculatus_F_contig14780.3632.1 vs. uniprot
Match: A0A022QJY5_ERYGU (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022QJY5_ERYGU) HSP 1 Score: 126 bits (317), Expect = 3.120e-34 Identity = 63/107 (58.88%), Postives = 84/107 (78.50%), Query Frame = 1
Query: 7 DFKTHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRANSLTAENKRRTLQRNDIASAVSKTDTYDFLIDIVPRDELKKDDAGHAAAAAV 327
DFK H LPLARIKKIM+ ++D+ MI+AEAP+I AKACE+F+LE+ +R+ T ENKRRTLQ+NDIA+A+S+TD +DFL+DI+PRDELK++ G +AAV
Sbjct: 56 DFKNHSLPLARIKKIMKADEDVR-------MISAEAPVIFAKACEMFILELTLRSWINTDENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGVTESAAV 155
BLAST of mRNA_H-canaliculatus_F_contig14780.3632.1 vs. uniprot
Match: A0A3F2RPL4_9STRA (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RPL4_9STRA) HSP 1 Score: 124 bits (311), Expect = 8.610e-34 Identity = 61/95 (64.21%), Postives = 79/95 (83.16%), Query Frame = 1
Query: 7 DFKTHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRANSLTAENKRRTLQRNDIASAVSKTDTYDFLIDIVPRDELK 291
DFKTH+LPLARIKKIM+ ++D+ MI+AEAP++ AKACE+F+LE+++RA T ENKRRTLQRNDIA A++KTD +DFLIDIVPRD++K
Sbjct: 54 DFKTHQLPLARIKKIMKTDEDVR-------MISAEAPVLFAKACEMFILELSLRAWIHTEENKRRTLQRNDIAMAITKTDVFDFLIDIVPRDDIK 141
BLAST of mRNA_H-canaliculatus_F_contig14780.3632.1 vs. uniprot
Match: A0A059A623_EUCGR (Histone domain-containing protein n=3 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059A623_EUCGR) HSP 1 Score: 126 bits (317), Expect = 9.010e-34 Identity = 63/107 (58.88%), Postives = 85/107 (79.44%), Query Frame = 1
Query: 7 DFKTHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRANSLTAENKRRTLQRNDIASAVSKTDTYDFLIDIVPRDELKKDDAGHAAAAAV 327
DFK H+LPLARIKKIM+ ++D+ MI+AEAP++ AKACE+F+LE+ +R+ ENKRRTLQ+NDIA+A+++TD +DFL+DIVPRDELK + AG AAAA+
Sbjct: 62 DFKNHQLPLARIKKIMKADEDVR-------MISAEAPVLFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDELKDEAAGLGAAAAM 161
BLAST of mRNA_H-canaliculatus_F_contig14780.3632.1 vs. uniprot
Match: D8SEV8_SELML (CBFD_NFYB_HMF domain-containing protein (Fragment) n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SEV8_SELML) HSP 1 Score: 124 bits (310), Expect = 9.390e-34 Identity = 61/105 (58.10%), Postives = 83/105 (79.05%), Query Frame = 1
Query: 7 DFKTHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRANSLTAENKRRTLQRNDIASAVSKTDTYDFLIDIVPRDELKKDDAGHAAAA 321
DFK H+LPLARIKKIM+ ++D+ MI+AEAP++ AKACE+F+LE+ +R+ T ENKRRTLQ+NDIA+A+++TD +DFL+DIVPRDELK++ G AA
Sbjct: 28 DFKNHQLPLARIKKIMKADEDVR-------MISAEAPVLFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDELKEETLGVTRAA 125
BLAST of mRNA_H-canaliculatus_F_contig14780.3632.1 vs. uniprot
Match: A0A662XQJ6_9STRA (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XQJ6_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.050e-33 Identity = 61/95 (64.21%), Postives = 79/95 (83.16%), Query Frame = 1
Query: 7 DFKTHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRANSLTAENKRRTLQRNDIASAVSKTDTYDFLIDIVPRDELK 291
DFKTH+LPLARIKKIM+ ++D+ MI+AEAP++ AKACE+F+LE+++RA T ENKRRTLQRNDIA A++KTD +DFLIDIVPRD++K
Sbjct: 52 DFKTHQLPLARIKKIMKTDEDVR-------MISAEAPVLFAKACEMFILELSLRAWIHTEENKRRTLQRNDIAMAITKTDVFDFLIDIVPRDDIK 139 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14780.3632.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14780.3632.1 >prot_H-canaliculatus_F_contig14780.3632.1 ID=prot_H-canaliculatus_F_contig14780.3632.1|Name=mRNA_H-canaliculatus_F_contig14780.3632.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=130bp QEDFKTHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVback to top mRNA from alignment at H-canaliculatus_F_contig14780:166..2018+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14780.3632.1 ID=mRNA_H-canaliculatus_F_contig14780.3632.1|Name=mRNA_H-canaliculatus_F_contig14780.3632.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1853bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14780:166..2018+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14780:166..2018+ >mRNA_H-canaliculatus_F_contig14780.3632.1 ID=mRNA_H-canaliculatus_F_contig14780.3632.1|Name=mRNA_H-canaliculatus_F_contig14780.3632.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=780bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14780:166..2018+ (Hapterophycus canaliculatus Oshoro5f female)back to top |