mRNA_H-canaliculatus_F_contig1466.3573.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1466.3573.1
Unique NamemRNA_H-canaliculatus_F_contig1466.3573.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1466.3573.1 vs. uniprot
Match: A0A6H5KVC1_9PHAE (EngB-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVC1_9PHAE)

HSP 1 Score: 456 bits (1173), Expect = 1.540e-159
Identity = 227/260 (87.31%), Postives = 243/260 (93.46%), Query Frame = 1 
Query:    1 FSTDSPEADISKRRQFKQIPVDPKVMRHLDTLCMGMERKKIERGRKLRLYRRGALSSAVPGATATKAKPQTFDHPTWAVKQVSSVTTLEEIPPAAAHLPEVALVGRSNVGKSTLLNALVGLQKHPDRRASVSETPGETRTLDFFQLGKGKRAKMVLADMPGYGFAYAHETQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKTDIEFLELLYDPKGPSPLGKYRPPKIQILLTKCDLVKRIDLARRVVFVRHQLEEV 780
            FST+    +ISKR+QFKQI VD KVMRHLD L +GME+KKIERGRKLRLYRRGA+SSAVPGAT T AKP+TFDHPTWAVKQ+S V+ LEEIPPAAA LPEVALVGRSNVGKSTLLNALVGL+KHP++RASVSETPGETRTLDFFQ+GKGKRAKM++ADMPGYGFAYA+E QRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKK DIEFL LLYDPKGPSPLGKYRPPKIQILLTKCDLVKRIDLARRVVFVR QLEEV
Sbjct:   43 FSTEPAGPEISKRQQFKQIAVDAKVMRHLDALGLGMEKKKIERGRKLRLYRRGAVSSAVPGATVTAAKPRTFDHPTWAVKQLSPVSKLEEIPPAAASLPEVALVGRSNVGKSTLLNALVGLKKHPNQRASVSETPGETRTLDFFQIGKGKRAKMIIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLGLLYDPKGPSPLGKYRPPKIQILLTKCDLVKRIDLARRVVFVRQQLEEV 302
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BLAST of mRNA_H-canaliculatus_F_contig1466.3573.1 vs. uniprot
Match: A0A835ZG72_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG72_9STRA)

HSP 1 Score: 259 bits (662), Expect = 8.760e-80
Identity = 145/279 (51.97%), Postives = 192/279 (68.82%), Query Frame = 1 
Query:    4 STDSPE---ADISKRRQFKQIPVDPKVMRHLDTLCMGMERKKIERGRKLRLYRRGA--LSSAVPGATATKAKPQTFDHPTWAVKQVSSVTTLEEIPPAAAHLPEVALVGRSNVGKSTLLNALVGLQKHPDRRASVSETPGETRTLDFFQLGKGKRAKMVLADMPGYGFAYAHETQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKTDIEFLELLYDPKGP-----SPLGKYRPPKIQILLTKCDLVKRIDLARRVVFVRHQLEEV--KDIALPTM 804
            S+D P    A IS R  F+ +P+D KV+ +LD+  +G E  K    RK  L  +G   L S  P + A K    TFD PTWAVK+V+S  ++EEIPP +  LPEVA VGRSNVGKSTLLNAL+GL+ HP  RA+ S  PGETR++DFF+LGKG +A+++L D PG+GFA+A E + + +   ++ YLRGRGA LKRV +LLDARHGFK  D+ FL+ LY  KG      +PLG Y+PPK+Q++LTKCDLV+R +LARRV  VR +L +V  ++  LP +
Sbjct:   66 SSDDPSGEPATISNRAAFRALPIDNKVLAYLDSRDLGRELPKRASKRKRVLIEKGLHDLHSVTPESAALK----TFDVPTWAVKKVASAQSVEEIPPPS-ELPEVAFVGRSNVGKSTLLNALLGLKGHPLVRAATSMRPGETRSIDFFRLGKGSKAQLLLVDTPGFGFAFAKEEESERFIATLLQYLRGRGALLKRVCMLLDARHGFKANDVAFLQRLYARKGQDGLGRNPLGPYKPPKLQVILTKCDLVQRRELARRVSQVRARLSDVTPRETYLPVL 339
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BLAST of mRNA_H-canaliculatus_F_contig1466.3573.1 vs. uniprot
Match: A0A1Z5JKA0_FISSO (GTP-binding protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKA0_FISSO)

HSP 1 Score: 160 bits (405), Expect = 6.050e-44
Identity = 101/289 (34.95%), Postives = 155/289 (53.63%), Query Frame = 1 
Query:    1 FSTDSPEADISKRRQFKQIPVDPKVMRHLDTLCMGMERKKIERGRKLRLYRRGALSSAVPGATATKAKPQTFD---------HPTWAVKQVSSVTTLEE---IPPAAAHLPEVALVGRSNVGKSTLLNALVGLQKHPDR----------------------RASVSETPGETRTLDFFQLGKGKRA--KMVLADMPGYGFAYAHETQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKTDIEFLELLYDP---KGPSPLGKYRPPKIQILLTKCDLVKRIDLARRV 750
            F+TD+     S+++QF+  PVDP +++++ ++ +G+  ++          R+   +   P   +    P ++           P   +  VS+V TL+E    PP     PE+AL+GRSNVGKSTLLN L+   ++ +R                      +A  S  PGET+ + F+ L  G+ +  ++ L D+PGYGFAYA E  ++    L+ ++L+ R   LKR++LL+DARHG KK DI+FL LL D    K  +   K   P IQ++LTKCDLV + DLARRV
Sbjct:   30 FTTDT-AVGKSQKQQFRDTPVDPSILKYITSVGVGIPPRR----------RKNRRNDNTPDEVSNANNPTSWKVPLPFGPNASPVRVIASVSAVNTLDENMGFPPVHKERPEIALIGRSNVGKSTLLNTLLYANRNENRQQEGGRAGRRSRIQTIELPRGIKAVTSNKPGETKHVTFYHLSSGEDSTCRLCLVDLPGYGFAYASEETKKTVDELIFSFLKQRQGHLKRILLLIDARHGMKKADIDFLTLLEDELVYKDSANNKKKTLPPIQVVLTKCDLVHQADLARRV 307
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BLAST of mRNA_H-canaliculatus_F_contig1466.3573.1 vs. uniprot
Match: B7FQ16_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQ16_PHATC)

HSP 1 Score: 160 bits (406), Expect = 2.360e-43
Identity = 119/314 (37.90%), Postives = 161/314 (51.27%), Query Frame = 1 
Query:    1 FSTDSPEADISKRRQFKQIPVDPKVMRHLDTLCMGM---------ERKKIERGRKLRLYRRGALSSAVPGATATKAK------PQTFDHPTWAVKQVSSVTTLEEIPPAA-AHLPEVALVGRSNVGKSTLLNALVGLQKHPDR--------------------RASVSETPGETRTLDFFQLGKGKRAK--------MVLADMPGYGFAYAHETQRQDWKGLMMAYLRGRGAP-LKRVMLLLDARHGFKKTDIEFLELLYDPK----------GPSPLGKYRPPKIQILLTKCDLVKRIDLARRVVFVRHQLEE 777
            FS+   +A +S RR FK++ V P +  ++  + +G+         +R  IE GR  R  R G   +  P AT  + +      P  F    + VK V +V TL++  PA   ++PE+ L GRSNVGKSTLLNAL+   KH D                     +A+ S+ PGETR + F+QL      +        + L D+PGYGFAYA E   + ++ LM  YL  RG   LKRV+LL+DARHG KK D++FL  L +            G        PP IQ++LTKCDLV R DLARRV  VR QL +
Sbjct:   11 FSSSVIDAKVSNRRSFKELAVHPSIHNYIQLIGVGIPPRRSKKKSQRIAIEPGR-FRDRRGGRAMN--PEATEDQKRERHWKPPPPFGPKAFPVKVVGNVATLDDHYPANHKNIPEIVLAGRSNVGKSTLLNALLYGNKHADAVVRQRVRGKTPESVKQPKGMKATTSDKPGETRAITFYQLAARLERENGVFYDHALRLVDLPGYGFAYAKEEAARRYRALMADYLLKRGNKYLKRVLLLIDARHGMKKADVDFLMDLQEHSRHLQENSRLDGKRKKNAQLPP-IQLVLTKCDLVTRADLARRVAQVRSQLSD 320
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BLAST of mRNA_H-canaliculatus_F_contig1466.3573.1 vs. uniprot
Match: A0A1Z5J7J0_FISSO (GTP-binding protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J7J0_FISSO)

HSP 1 Score: 157 bits (398), Expect = 7.860e-43
Identity = 101/283 (35.69%), Postives = 155/283 (54.77%), Query Frame = 1 
Query:    1 FSTDSPEA-DISKRRQFKQIPVDPKVMRHLDTLCMGMERKKIERGRKLRLYRRGALSSAVPGATATKAKPQTFDH---PTWAVKQVSSVTTLEE---IPPAAAHLPEVALVGRSNVGKSTLLNALVGLQKHPDR----------------------RASVSETPGETRTLDFFQLGKGKRA--KMVLADMPGYGFAYAHETQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKTDIEFLELLYDP---KGPSPLGKYRPPKIQILLTKCDLVKRIDLARR 747
            F+TD+  +   S+R+QF+  PVDP +++++ ++ +G+  ++ +  R       G         T+ K  P  F     P   +  VS+V TL+E    PP     PE+A +GRSNVGKSTLLN L+   ++ +R                      +A  S  PGET+ + F+ L  G+ +  ++ L D+PGYGFAYA E  ++    L+ ++L+ R   LKR++LL+DARHG KK DI+FL +L D    K  + + K   P IQ++LTKCDLV + +LARR
Sbjct:   30 FATDTAASVGKSQRQQFRDTPVDPSILKYITSIGVGIPPRRRKNRRN-----DGTTDENANNPTSWKV-PLPFGPNALPVRVIASVSAVNTLDENMGFPPVHKERPEIAFIGRSNVGKSTLLNTLLYANRNENRAADGGRAGRRSRIQTIELPKGIKAVTSNKPGETKQVTFYHLSSGEDSTCRLCLVDLPGYGFAYASEETKKTVDDLIFSFLKQRQGHLKRILLLIDARHGMKKADIDFLTMLEDELVYKDSANIKKKTLPPIQVVLTKCDLVHQGELARR 306
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BLAST of mRNA_H-canaliculatus_F_contig1466.3573.1 vs. uniprot
Match: A0A7S2GV24_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GV24_9STRA)

HSP 1 Score: 153 bits (386), Expect = 5.180e-42
Identity = 79/165 (47.88%), Postives = 105/165 (63.64%), Query Frame = 1 
Query:  298 EVALVGRSNVGKSTLLNALVGLQKHPDRRASVSETPGETRTLDFFQLGKGKRAKMVLADMPGYGFAYAHETQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKTDIEFLELLYDPKG--PSPLGKY---RPPKIQILLTKCDLVKRIDLARRVVFVRHQLEE 777
            E+ALVGRSNVGKS+LLN ++ +   P  +A     PG T+ L F+      R  + L D+PGY FAY  + + + W  LM+ YLR RG  LKRV LLLDARHG K  D +FL LLY+P+     P G++    PPK+Q++LTKCDLV R DL RR+  VR ++ +
Sbjct:   40 EIALVGRSNVGKSSLLNTVLNISASPKNKAPTGTRPGVTQKLHFYAAAT--RKPLTLVDVPGYSFAYEDQERIEAWNDLMLKYLRHRGPSLKRVCLLLDARHGLKVIDRQFLRLLYEPRPIVDPPPGEHVLWDPPKLQVILTKCDLVDRFDLVRRIQRVREEMSD 202
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BLAST of mRNA_H-canaliculatus_F_contig1466.3573.1 vs. uniprot
Match: A0A7S1VXG1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VXG1_9STRA)

HSP 1 Score: 154 bits (390), Expect = 5.550e-40
Identity = 100/217 (46.08%), Postives = 126/217 (58.06%), Query Frame = 1 
Query:  247 SSVTTLEEIPPAAAHLPEVALVGRSNVGKSTLLNALV-GLQ------------KHPDR-------RASVSETPGETRTLDFFQL------------GKGKRAKM--VLADMPGYGFAYAHETQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKTDIEFLELLYDP------KGPSPLGKYRPPKIQILLTKCDLVKRIDLARRVVFVRHQLEE 777
            SS +  EE+P ++  L EVAL GRSNVGKSTLLNAL+ G Q            K P+        +A +S+ PGETR +  +QL            GK  + KM  +LAD+PGYGFA+A E + ++W  LM  YL  RG  LKRV+LL+DARHG K  D EFL  L +       +G +P      P IQI+LTKCDLV + DLARRVV VR QL +
Sbjct:  257 SSGSLEEELPKSSKGLSEVALAGRSNVGKSTLLNALLYGNQLGKPQERQYRRGKTPENAKLPKGVKAVMSDKPGETRRITLYQLSSEIIKPPKDEQGKKHKEKMSLLLADLPGYGFAFASEEKYKEWHDLMRHYLLDRGKSLKRVLLLIDARHGMKNADFEFLSSLQESLKSTSKEGATPKNVRELPPIQIVLTKCDLVTQDDLARRVVQVRQQLSD 473
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BLAST of mRNA_H-canaliculatus_F_contig1466.3573.1 vs. uniprot
Match: A0A7S1ZZ98_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZZ98_TRICV)

HSP 1 Score: 150 bits (378), Expect = 2.040e-38
Identity = 98/219 (44.75%), Postives = 125/219 (57.08%), Query Frame = 1 
Query:  265 EEIPPAAAHLPEVALVGRSNVGKSTLLNALV-GLQ---------------KHPDR-------RASVSETPGETRTLDFFQLG--------KGKRAK-----MVLADMPGYGFAYAHETQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKTDIEFLELLYDP------KGPSPLGK------YRPPKIQILLTKCDLVKRIDLARRVVFVRHQLEE 777
            +++P +++ LPEVAL GRSNVGKSTLLNAL+ G Q               K P+R       +A VS+ PGET+ +  +QL         +G+R       +VLAD+PGYGFAYA E +   W  LM  YL  RG  LKR++LL+DARHGFK  D  FLE L +       KG     K      +  P IQI+LTKCDL K+ DLARRVV V+ QL +
Sbjct:  229 DDMPRSSSGLPEVALAGRSNVGKSTLLNALLYGNQPSRDGHSVERMYQRGKTPERMKLPRGEKAKVSDKPGETQDITLYQLSSDMVFLNKEGQRENKSKMSLVLADLPGYGFAYASENKATTWSELMKHYLLRRGESLKRILLLIDARHGFKNADYAFLETLQNALKEGQKKGAHVSSKQQCGLEFDLPPIQIVLTKCDLCKQDDLARRVVQVKEQLSK 447
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BLAST of mRNA_H-canaliculatus_F_contig1466.3573.1 vs. uniprot
Match: A0A7R9YFZ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFZ8_9STRA)

HSP 1 Score: 149 bits (377), Expect = 3.740e-38
Identity = 92/235 (39.15%), Postives = 126/235 (53.62%), Query Frame = 1 
Query:    1 FSTDSPEADISKRRQFKQIPVDPKVMRHLDTLCMGMERKKIERGRKLRLYRRGALSS-----------AVPGATATKAKPQ---------TFDHPTWAVKQVSSVTTLEEIPPAAAHLPEVALVGRSNVGKSTLLNALVGLQKHPDRRASVSETPGETRTLDFFQLG-KGKRAKMVLADMPGYGFAYAHETQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKTDIEFLELL 642
            F   S  A +  R Q +          +L+T  +G  +    R   LR+ +RG + S           AV  A   KA+ +         + D   W  ++++ VT+ EEIP     LPEV ++GRSNVGKSTLLNA++  + HP RRA  S+ PG TRTLDF+ +G K +R +M L D PGYGFAY    +   W  L + +L+G    L+R++LLLDARHGFK  D  FLE L
Sbjct:   36 FRRSSSRAQVRSRAQIEA---------YLETRGLGRIKGDRSRSGALRIAKRGRVKSGKIKGARNQVTAVEAALLRKAELKVPKEVSEYFSRDGARWNTRRIAHVTSEEEIPAPKDRLPEVMIIGRSNVGKSTLLNAILDTKGHPLRRAETSDKPGLTRTLDFYSVGGKRQRPRMALIDAPGYGFAYGKTVELLKWHHLTLRFLQGNRPSLRRLLLLLDARHGFKAADKNFLEAL 261
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BLAST of mRNA_H-canaliculatus_F_contig1466.3573.1 vs. uniprot
Match: A0A7S1BKW0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BKW0_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.050e-36
Identity = 92/234 (39.32%), Postives = 128/234 (54.70%), Query Frame = 1 
Query:  178 PGATATKAKPQ-TFDHPTWAVK-QVSSVTTLEEIPPAAAHLPEVALVGRSNVGKSTLLNAL------------VGLQKHPDR-----------RASVSETPGETRTLDFFQLG---------KGKRAKMVLADMPGYGFAYAHETQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKTDIEFLELLYDPKGPSPLGKYRPPKIQILLTKCDLVKRIDLARRVVFVRHQLEE 777
            P  +ATK   + T D   W     V ++     +PP +A  PEVALVGRSNVGKSTLLNAL            V + K   R           +A VS  PGETR +  ++L             R+ + LAD+PGYGFA+A + ++  W+   + YL  RG  L+R++LLLD RHG K+ D++F+ +L D  G    G+  PP +Q++LTKCDLV++ DLAR V   + +L E
Sbjct:   18 PPFSATKTYVRSTADGEAWVRSLPVRALGRDRSLPPPSAATPEVALVGRSNVGKSTLLNALLYGNVYDPDVAPVSVPKRKGRTPDAVKLPRGAKAIVSARPGETRRIVLYKLAAELLRPGDASPVRSGLALADLPGYGFAFADDAEKAAWRDRTLDYLCRRGPALRRILLLLDGRHGIKRADLDFVAMLQDEMGA---GETLPP-LQLVLTKCDLVRQEDLARNVRKSQRELGE 247
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1466.3573.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVC1_9PHAE1.540e-15987.31EngB-type G domain-containing protein n=2 Tax=Ecto... [more]
A0A835ZG72_9STRA8.760e-8051.97P-loop containing nucleoside triphosphate hydrolas... [more]
A0A1Z5JKA0_FISSO6.050e-4434.95GTP-binding protein n=1 Tax=Fistulifera solaris Ta... [more]
B7FQ16_PHATC2.360e-4337.90Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A1Z5J7J0_FISSO7.860e-4335.69GTP-binding protein n=1 Tax=Fistulifera solaris Ta... [more]
A0A7S2GV24_9STRA5.180e-4247.88Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1VXG1_9STRA5.550e-4046.08Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1ZZ98_TRICV2.040e-3844.75Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]
A0A7R9YFZ8_9STRA3.740e-3839.15Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S1BKW0_9STRA1.050e-3639.32Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1466contigH-canaliculatus_F_contig1466:112..6625 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score459.1
Seed ortholog evalue1.4e-126
Seed eggNOG ortholog2880.D7FRN1
KEGG koko:K03978
EggNOG free text desc.GTP binding
EggNOG OGsCOG0218@1,KOG2486@2759
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionYihA1, YihA/EngB-like GTPase
Ec32 orthologEc-12_002430.1
Exons9
Model size810
Cds size810
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929213.1862957-CDS-H-canaliculatus_F_contig1466:111..2511622929213.1862957-CDS-H-canaliculatus_F_contig1466:111..251Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 112..251 -
1696845720.279541-CDS-H-canaliculatus_F_contig1466:111..2511696845720.279541-CDS-H-canaliculatus_F_contig1466:111..251Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 112..251 -
1622929213.2030187-CDS-H-canaliculatus_F_contig1466:1522..16191622929213.2030187-CDS-H-canaliculatus_F_contig1466:1522..1619Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 1523..1619 -
1696845720.2920954-CDS-H-canaliculatus_F_contig1466:1522..16191696845720.2920954-CDS-H-canaliculatus_F_contig1466:1522..1619Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 1523..1619 -
1622929213.217142-CDS-H-canaliculatus_F_contig1466:2035..20741622929213.217142-CDS-H-canaliculatus_F_contig1466:2035..2074Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 2036..2074 -
1696845720.3010116-CDS-H-canaliculatus_F_contig1466:2035..20741696845720.3010116-CDS-H-canaliculatus_F_contig1466:2035..2074Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 2036..2074 -
1622929213.2471087-CDS-H-canaliculatus_F_contig1466:2415..24971622929213.2471087-CDS-H-canaliculatus_F_contig1466:2415..2497Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 2416..2497 -
1696845720.311038-CDS-H-canaliculatus_F_contig1466:2415..24971696845720.311038-CDS-H-canaliculatus_F_contig1466:2415..2497Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 2416..2497 -
1622929213.264204-CDS-H-canaliculatus_F_contig1466:3324..33751622929213.264204-CDS-H-canaliculatus_F_contig1466:3324..3375Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 3325..3375 -
1696845720.3233383-CDS-H-canaliculatus_F_contig1466:3324..33751696845720.3233383-CDS-H-canaliculatus_F_contig1466:3324..3375Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 3325..3375 -
1622929213.282207-CDS-H-canaliculatus_F_contig1466:4491..46221622929213.282207-CDS-H-canaliculatus_F_contig1466:4491..4622Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 4492..4622 -
1696845720.3328083-CDS-H-canaliculatus_F_contig1466:4491..46221696845720.3328083-CDS-H-canaliculatus_F_contig1466:4491..4622Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 4492..4622 -
1622929213.2951818-CDS-H-canaliculatus_F_contig1466:4915..50301622929213.2951818-CDS-H-canaliculatus_F_contig1466:4915..5030Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 4916..5030 -
1696845720.3419144-CDS-H-canaliculatus_F_contig1466:4915..50301696845720.3419144-CDS-H-canaliculatus_F_contig1466:4915..5030Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 4916..5030 -
1622929213.3181124-CDS-H-canaliculatus_F_contig1466:5532..56331622929213.3181124-CDS-H-canaliculatus_F_contig1466:5532..5633Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 5533..5633 -
1696845720.3543131-CDS-H-canaliculatus_F_contig1466:5532..56331696845720.3543131-CDS-H-canaliculatus_F_contig1466:5532..5633Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 5533..5633 -
1622929213.3485672-CDS-H-canaliculatus_F_contig1466:6571..66251622929213.3485672-CDS-H-canaliculatus_F_contig1466:6571..6625Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 6572..6625 -
1696845720.3636436-CDS-H-canaliculatus_F_contig1466:6571..66251696845720.3636436-CDS-H-canaliculatus_F_contig1466:6571..6625Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1466 6572..6625 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1466.3573.1prot_H-canaliculatus_F_contig1466.3573.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1466 112..6625 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1466.3573.1

>prot_H-canaliculatus_F_contig1466.3573.1 ID=prot_H-canaliculatus_F_contig1466.3573.1|Name=mRNA_H-canaliculatus_F_contig1466.3573.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=270bp
FSTDSPEADISKRRQFKQIPVDPKVMRHLDTLCMGMERKKIERGRKLRLY
RRGALSSAVPGATATKAKPQTFDHPTWAVKQVSSVTTLEEIPPAAAHLPE
VALVGRSNVGKSTLLNALVGLQKHPDRRASVSETPGETRTLDFFQLGKGK
RAKMVLADMPGYGFAYAHETQRQDWKGLMMAYLRGRGAPLKRVMLLLDAR
HGFKKTDIEFLELLYDPKGPSPLGKYRPPKIQILLTKCDLVKRIDLARRV
VFVRHQLEEVKDIALPTME*
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mRNA from alignment at H-canaliculatus_F_contig1466:112..6625-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1466.3573.1 ID=mRNA_H-canaliculatus_F_contig1466.3573.1|Name=mRNA_H-canaliculatus_F_contig1466.3573.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=6514bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1466:112..6625- (Hapterophycus canaliculatus Oshoro5f female)
TTCTCCACGGATTCGCCAGAGGCGGATATCAGCAAGCGAAGGCAGTTCAA
ACAGGTCTGGTGTCTACCATGTGCCTGTGTGTTTGTCGAGGCCGCTGCGT
TTGTTTGAAAGTTGACAGTCTCGTCTCAGGGATACGTTGCTGTTGCTCCA
CGGAATCTGTAGGCTGCGACAAGCTGCTGCATTGTGCAAGTATTATCTAC
TGCTGCACCGCTCGAGATGCGAATACTACTGTAGCATTGGTGCCACGAGC
AATGCTTTCAGAACAACCAGGATAATCCGTCCCGTCAACAGTTCCAGATG
AAGAAAGTGGAGAGAGGAAAGTCAAAGCAGAGGCGGCTGCTCTGATGAGA
AGACGCGGGAAGACTCGTGAAAAGTTCAAGTTCAGGTTCAGGTTGCCTTC
GATGAAAACGGTTCCCTCTCCCGCATCGTGCGCCTCGGGGCTACGAGCCT
TCCCCTCGAAACTTCTCACCCACGTACAAGTAGTTGTAGAATATCCAAAG
GAAATCAGCCCATCCAGGAAAATTGCAATGTTGTTCAACGACCAAGTTGC
CTTCCACAACAAAGTCGCCTCCCCCTCGGCAAAAAAACCTCGAGGTGCGT
CTCACATGACATTCCGCAGGAGGTGTTCCTACGAGGTTGTTACGTCTTTC
TCTAAAACTGCTGGGACACCTCCCAGATGGTAATCCAAGCCATGAAGGCT
GACCAAACTGCCTTGCTAAAGGCAATGGTCTACTTCTAGCTTACCTTGAA
TAACCTTCGACGCCGTTTTGTTCTGTGTGCATCTAGCGACTGCCGCTCGG
AACCGCAGAGGTCACCTCAGATATGTCGTCCGGGCTACTGCGACGTTTTC
CTCGGTGAAAGGGACCGCTGCTGGCGTATCGCCCTGTCGTTATATTTGTG
CCCACCCACAACTCCATGACCCCCGGCTCTACCGGGAAAGCATCCGTAAC
AATCTCGTGTAAACCCTCGACGTCCGTCCCTTTCCGTTCCAGATCCCCGT
CGACCCGAAGGTGATGCGGCATTTGGACACGCTGTGCATGGGCATGGAGA
GGAAGAAAATTGAGAGGGGCAGGAAGCTGCGACTTTATCGCAGGTGAGAC
AAGAGGCGGCGGCGCAGAGCAGCGGTGTCAGGGGCTTTCACCGTACTAGC
TGGTTCCAACTCCCCTGTCTGTACTTCCCAGGGCGCGCGTTGCTGTGCCC
CTGGCACGTTGCCGCCGCGTGCAACATCCACGACGAGCCGCGTGATGACA
GGGTGTCCCTCTGCTCTCCTCCTTGCGAAGTACAAGCATGATGGGCAGCA
GCGGCAGCGCCGCACGCAGGGGTGCCTCGGTCGGACCAAGACGTAAAAAC
TGCGTCACCTCACCCGGCAGGAGAATCGCACGCCGGGGCGTTCTCTGTCG
GCGACCCCGTTCAATACCAGTGTTTCGTTCTTCTCCACGACGGACAACGA
CAGAGAAGCGCCCCGCGATTCTGCCACCCCAACCACGGAACCCCCTCTAA
CGCGCGCTTAAACATGGACACATTTTTTTCGCTTGCTCTCTCGGCGCTTG
GTGCTGTCTGTTTTCGATGACCTCGGTGGACACCGACGACACCAGAGGGG
CCCTGTCGTCTGCGGTGCCGGGAGCCACCGCTACTAAGGCCAAGCCCCAG
ACATTCGACCACCCCACGTGGGCCGTCAAGCAGGTTTCTTCCGTCACCAC
CCTTGAGGAGGTGAGATGCTGCTGCTGGCGCTGCCGCCTGCTGCACCCTC
CCCCCCCCCCCCCCTCCCCCCCCCTGTGGCGTTTGTGGCAATCGCGGGAG
GCGCGCTCAGCCCCTGAAAATCGGCTACAGGTTCAAAAAGCAGGTGCGCG
GTTCGACGCGAAATTCAGTGCCGCCGTTGCCGACACGCCTGAGCTGATGT
CGTTCCCGGATGGCACGCCGCCCTTCACCGCCCGCTTCAAGCTTGTGGCT
CGTGATGGTGACGACTGGCTGTCTCGGTCCGCCCGCTCCCTACGCTCCGG
CAGATCCCTCCCGCGGCAGCCCACTTGCCCGAGGTGGCCCTCGTGGGCAG
GTCGAACGTGGGGAAGTCGACCCTACTCAACGCTCTCGTGGGGCTGCAGA
AGCACCCGGACAGACGAGCCAGCGTGTCAGAAACGTGAGCCACTCATGCC
TACACCGCGCTGCCTAGAATCTGGGTTTGGGCCTGAGCCCAGCACCCTGG
CGGAGAGTTGAGATGAAAGGGCCGCTGTTCGTTCCCGATCTTGCACGCGA
TCGAAGTGCCTCATTTTATCCCTTCTTTTACGTACCGGTGGTCTTGGCAG
GTTGTGTCTCTCTGTTTGGGCTATACCATTGCTGCGGGGCATGTTTTCTG
GTCGTCGTTTATTTTTCGCAAGAAAATCGCCTCCTCGTGGAGCTCCCATG
TATATTGGCAGATGCAGATTTTGGGATGGTTTGTTCTGACCGCGGATTCC
GGGGTCCCAATTTGTGGGTGACGGGGTATCACGTAGTGATCGGGGCAATT
TCAAGAGGCAGGTGACAACTGACAACAGTGGCAAGCTCACGTACGTCTCG
AACAGACTGATCTTGCTGGAGGTCGTTGGGCTATGAAAGAAGCCGTTCAC
GTGGCAAATATCGGAGTCCGTCGGACGATCATGCTCACCACTGCTTCCGA
CGATAAAAAAAAGCCGAGTTTCTGCGAAATGCTTTTGTCCCAACCTGACA
CATCAATGAACCCTCACACATCAATGAACCCTCCTTGTTTGGAGCTTAAT
AGAAGCCTCGAGCTACGCCTCTCACGACGTGCCTCTTGAGGTCTTCATAC
GATGTTGCTGTGTTTTTTCTTGTAAATATGTTCCTTGGGATCTGTTACTT
CCTCCAAGGGGTTCAACGAGCTTTTTTTGAGGTAACGGTTCTGCATGGGG
CGCTCCAGAACACGAAAATGTTGTCTGGCAGGACCAAGAAAGTGTTTGCG
GCGAATCAAGCAACAAGACGGAGGTATCGATCGGTCGAGCTACTTTCCTG
CATGAAGCGCGTGTTTGGCAGGCCACGCCATACCGAGCGCTTGGTTGTGG
CCAACGGCCTGGAGTGCTTTCGACAAGTCACCGTGAATAAGAGAGGCCAC
AAAGCCTAACGCAGGCAACGAAACAGCGGAGAAATCATCGAAGCCTGCGT
GCTGACCGTGTGCCTGGTGGTGTTAAATCTTCCGGTTCCTCCCTTGTCGC
CTATCTTGACCTGTGTCTCAATGGGGTGTGCCCTGCGACACATAATACAG
GCCTGGAGAGACGCGGACGCTCGACTTTTTCCAGCTGGGAAAGGGCAAAA
GGTGGGCAGTGGCCGCACCATGGGCTTTTTTTCACTATCTGCGCCATAAG
CGGCAACTGCACGAGTCGACGAGGAACCCCCCCCGTCCGGTTCGGGTGCA
TCACCCAGCAGATGCCTTTCGATGGGCCCCCTTCTCCCTACCCTTGTACT
TTGTGCCATGCCTCGTCGCTTATTCTTGAGCGCATGAGGAGCGTGAAGCT
TGGGGGGGAAGCGTCAGCGAAGGTTCAAAGCCGTTCGGCCCGTTTTGTTC
ATGTTTGCCGCTTGGCTGTCCCGTTTTTAAGAGAAAAACATGGCAACACC
GTGGGAGCACTTCCTGAAGCACGTCGTCGTGCTTGGGGGTCCCATTTTCA
GGTTCTTCGTGCCTCGGTTGTCGCTGGGCCGTGTATGCACTTGTAGGTCT
CCCGATGTTTGCCGCAAATCTCTTGCCGAATGTCTCGCTGATTACCGTGG
TGTAGTTAGGGCCGTCCGATACCGACACGGCGGAGGCGTCAGAGGTGGAT
GAGCGAGCGGCGGAGCCGAGACGCTGTTGACAAAAAAAAACGGTGGAACG
TACTCTCAGACGAAGCGCATGAAGCATCTTGAGGGGATACGCTCAGGCGG
ATTTGGAGCATGCTCTGCTTGCAGACACGCACCGACGCATGAAAGAGTTT
CTTCCTCAGGCCGGTCGTTGACGAATCAAAGACCAATCTAGCGGTTGGGC
TGGCAATCGAGTTAGTGTCCAAGCAATCAATGAATCAATCAATCGAAATT
TGCAAGACTCTTTCCGATTTGTGAGTTGAACGACGCAAAATCAACGAAGC
GTCGCCTCCTGGCCCTTGAATTCTGCAGGGCCAAGATGGTTCTTGCCGAC
ATGCCTGGCTACGGCTTCGCCTACGCTCATGAGACGCAGCGACAAGACTG
GAAGGGCTTGGTAAGCTACTGCAGTACCCAGCAACCCCCCCCCCCCACCT
TTAAAGACGGACACACCACGGGCGAGGCCAAACTCCGGCTGGAAGGAAAG
AGTCGAGCTTGCGTACGAAGAGTGACAACCCTCCCTCTCTCCCGTTTCGT
ACGTTCAGAGAACCTCCCGCGTGTCACGCTCACGTGCTGCTTGACGCTGC
TCGCTTCCTTAATCGACTCGTCTGCGCCTCCCCCCTCCCCCCGCACGTTT
TCCTGCCGCTGGCCACCACCGCCGCCATGCCAAATCACACCGGATGTCAA
ACGGACTACGCCATCTCCTTCCGGCACGCCTTACGCTCTCTGGGCCTTCA
GATGATGGCCTACCTCCGAGGGCGGGGAGCGCCTCTCAAGGTCAGACAGG
AAGCTGCAGCGCCGCTTCGAGCGCCCGTTGTGGCACAACCATGCGCGGGA
ACGTTTATGAGGACGGTGCACCGGCTGGAGGACAGGGGATCCCTTCTGTG
CTTGAAGTGGATTCGATCTTGTCAAGAAACATGTTGCACTCTTGAATAGT
CACCGAGATACAATCGCGGCAGAAACAGGCTGCCCGTGGCGGGGCCTCTA
CCCGGAAGGGGCCAACGCCACTAGACCGGAAACGCCGACTTACTCGTGGT
GGTGTCGCTGTCCCGTGTCGTGCAAAAACGGTGCACCCGAAGATTTTCGT
GATGCGTGAGTCCCAGCTCGCCCTCTTACTCACACGTGTATTTCTCTCCT
CTTCTGGGTCGCACGATTTCTGTCTTCTGTCTTGCTGTCCGCTTCTTTCC
GCGAAGCGAGTCATGCTGCTCCTGGACGCGAGGCATGGATTCAAGAAGAC
GGACATCGAGTTCTTGGAGCTTCTGTACGACCCCAAGGGTCCGTCCCCGC
TCGGTGAGGATGAACCGCCGTCATGATCGCTTGAAACTGAAACAACATAC
CTGTTACTTGTGTTCTTGATTAATTCTAAGCCCTCCGGGCACAGAGATCA
TGACGTCCGTGTCGATCAGAGGACCACCATCACGCATTATCTGCGCCATG
GCTCTCATCGTTCTTTTGTCTGAACCCACGTTGGTCCACATTCGCTTCGA
TCGGCGAGGCGGCCTCGGCGTCAGCTCCCGTACTCGGCACAGAGAAAGGC
TGGGCCATAGCGCTGGTTTGTCGCTGGTTGTTGCTGATGCTTTTGCTTTT
TGGGTTATTGAAAGTTGCGATCCGGAGAGCGCGAGACGTAGGCAGCAAAA
ATGCGGCGGAATTTGGATGTTCCAAACATTAAGTCGTGTTTCCGGAGAGG
GGAGGGTTATGATCTGTTTGTCTAATTCATGTAACTCGACTCTTTTTACC
CATGCCTGGGGTGTGGGTAGTAGCCGACAAGGTGGTAGGTGCTCCCGTGC
TTTGCCACGCGTTGAGCGTGCGGGTGTCACGAAAGGACGCCTCCTTGACC
TCCTGGGAGTGTCTTCTCGCCCGAATCAATCGTCGTCGAAAGCGCGATCC
TGACAGCTTTGCCGCCGGTAGCTGCTTGGGATGGATGCCGTTCTTGCTTG
GGATGGATGCCGTTCTTTTTTCGCGACAATCCTCGTGCAGTCTTGCGTGT
GATCGAGTAGAGTATGCACGCGTGCGTGGCAGTAAAAAAAACAGACTCCG
TATCAGAACCACGCACGGACTGCCTCGTAGTCCTAAGACCGCCGGCTCGT
GGTCGTCTTGCATTTCCACAATAGACTCAAAGATGGCTACCATCCAGCGC
TGCTGCGTGTGCGGCCGTTTTGCTCGCATCGAAGCTGAAAAATCTTTGAT
GGGTTGCCCTCCTGCCGTATCATCGGAGCCGCCGTGGAAATGTCCTACCC
AGGACCACTTGGCATGGAAATCGCTGTCGAAAAAATCGTGCCGACGATAC
ACGCGCTCACCTTCATGATATGGCAGCAGGAGCACCTCCGCTAATGTTGC
TCGTGAAGCCATTCGCTAGACCATCCCGACAAACCTCCGCCGAGGCCTCC
CGCCGTCGTGCGAACCTTTGACACGCAAGACATTCTGTGGCGATCTGGCC
GGTGGGTCTATCCATGCGTTTGATTTTCAACACAAATACGAACACACACA
CACACACACACACACACAAGCACCAAAACCATGCATGACACATGCATGCG
CGTTCGCGACTCGCACGACCGCAGGCAAGTACCGCCCGCCAAAGATCCAG
ATCTTGTTGACAAAGTGCGACCTCGTGAAGCGGATCGACCTCGCCCGGAG
AGTGGTGTTCGTCCGGCATCAGCTAGAGGAGGTAAAAGACATCGCCCTTC
CGACAATGGAATAA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1466:112..6625-

>mRNA_H-canaliculatus_F_contig1466.3573.1 ID=mRNA_H-canaliculatus_F_contig1466.3573.1|Name=mRNA_H-canaliculatus_F_contig1466.3573.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1620bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1466:112..6625- (Hapterophycus canaliculatus Oshoro5f female)
TTCTCCACGGATTCGCCAGAGGCGGATATCAGCAAGCGAAGGCAGTTCAA
ACAGTTCTCCACGGATTCGCCAGAGGCGGATATCAGCAAGCGAAGGCAGT
TCAAACAGATCCCCGTCGACCCGAAGGTGATGCGGCATTTGGACACGCTG
TGCATGGGCATGGAGAGGAAGAAAATTGAGAGGGGCAGGAAGCTGCGACT
TTATCGCAGATCCCCGTCGACCCGAAGGTGATGCGGCATTTGGACACGCT
GTGCATGGGCATGGAGAGGAAGAAAATTGAGAGGGGCAGGAAGCTGCGAC
TTTATCGCAGAGGGGCCCTGTCGTCTGCGGTGCCGGGAGCCACCGCTACT
AAGGCCAAGCCCCAGACATTCGACCACCCCACGTGGGCCGTCAAGCAGGT
TTCTTCCGTCACCACCCTTGAGGAGAGGGGCCCTGTCGTCTGCGGTGCCG
GGAGCCACCGCTACTAAGGCCAAGCCCCAGACATTCGACCACCCCACGTG
GGCCGTCAAGCAGGTTTCTTCCGTCACCACCCTTGAGGAGATCCCTCCCG
CGGCAGCCCACTTGCCCGAGGTGGCCCTCGTGGGCAGGTCGAACGTGGGG
AAGTCGACCCTACTCAACGCTCTCGTGGGGCTGCAGAAGCACCCGGACAG
ACGAGCCAGCGTGTCAGAAACATCCCTCCCGCGGCAGCCCACTTGCCCGA
GGTGGCCCTCGTGGGCAGGTCGAACGTGGGGAAGTCGACCCTACTCAACG
CTCTCGTGGGGCTGCAGAAGCACCCGGACAGACGAGCCAGCGTGTCAGAA
ACGCCTGGAGAGACGCGGACGCTCGACTTTTTCCAGCTGGGAAAGGGCAA
AAGGCCTGGAGAGACGCGGACGCTCGACTTTTTCCAGCTGGGAAAGGGCA
AAAGGGCCAAGATGGTTCTTGCCGACATGCCTGGCTACGGCTTCGCCTAC
GCTCATGAGACGCAGCGACAAGACTGGAAGGGCTTGGGCCAAGATGGTTC
TTGCCGACATGCCTGGCTACGGCTTCGCCTACGCTCATGAGACGCAGCGA
CAAGACTGGAAGGGCTTGATGATGGCCTACCTCCGAGGGCGGGGAGCGCC
TCTCAAGATGATGGCCTACCTCCGAGGGCGGGGAGCGCCTCTCAAGCGAG
TCATGCTGCTCCTGGACGCGAGGCATGGATTCAAGAAGACGGACATCGAG
TTCTTGGAGCTTCTGTACGACCCCAAGGGTCCGTCCCCGCTCGCGAGTCA
TGCTGCTCCTGGACGCGAGGCATGGATTCAAGAAGACGGACATCGAGTTC
TTGGAGCTTCTGTACGACCCCAAGGGTCCGTCCCCGCTCGGCAAGTACCG
CCCGCCAAAGATCCAGATCTTGTTGACAAAGTGCGACCTCGTGAAGCGGA
TCGACCTCGCCCGGAGAGTGGTGTTCGTCCGGCATCAGCTAGAGGAGGTA
AAAGACATCGCCCTTCCGACAATGGAATAAGCAAGTACCGCCCGCCAAAG
ATCCAGATCTTGTTGACAAAGTGCGACCTCGTGAAGCGGATCGACCTCGC
CCGGAGAGTGGTGTTCGTCCGGCATCAGCTAGAGGAGGTAAAAGACATCG
CCCTTCCGACAATGGAATAA
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