mRNA_H-canaliculatus_F_contig14628.3559.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig14628.3559.1
Unique NamemRNA_H-canaliculatus_F_contig14628.3559.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14628.3559.1 vs. uniprot
Match: A0A6H5L470_9PHAE (Importin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L470_9PHAE)

HSP 1 Score: 327 bits (839), Expect = 7.080e-106
Identity = 158/177 (89.27%), Postives = 166/177 (93.79%), Query Frame = 1 
Query:    1 QERLASTDVWHRESAMLALGAASEGCLDGLGPHLPLLFDFLIQQQKAETPQLRSIACWVLGRFMRWIVSQESEERYLVPVLRGLVERVLDGNKKVQEAACSAMSVMEEEVGYGLQAYLDPILRCFAAALAKYQTRSLIVLYDTIGTLADNAGTCLAQPALLAVLMPPLMQRWNQVTD 531
            +ERLAS DVW RESAML+LGAASEGCL+GLGPHLP LF FLIQQQKAETPQLRSIACWVLGRFMRWIV QESEE YLVPVLRGL+ER+LDGNKKVQEAACSA+SVMEEEVGY LQ YLDPI+RCFAAALAKYQTRSLIVLYDTIGTLADNAG CLAQPAL+ VLMPPLMQRWNQV D
Sbjct:  405 EERLASADVWQRESAMLSLGAASEGCLEGLGPHLPALFSFLIQQQKAETPQLRSIACWVLGRFMRWIVGQESEEHYLVPVLRGLIERLLDGNKKVQEAACSALSVMEEEVGYRLQVYLDPIVRCFAAALAKYQTRSLIVLYDTIGTLADNAGNCLAQPALMTVLMPPLMQRWNQVAD 581
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14628.3559.1 vs. uniprot
Match: A0A485KZ57_9STRA (Aste57867_13736 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZ57_9STRA)

HSP 1 Score: 194 bits (494), Expect = 1.570e-54
Identity = 93/178 (52.25%), Postives = 118/178 (66.29%), Query Frame = 1 
Query:    1 QERLASTDVWH-RESAMLALGAASEGCLDGLGPHLPLLFDFLIQQQKAETPQLRSIACWVLGRFMRWIVSQESEERYLVPVLRGLVERVLDGNKKVQEAACSAMSVMEEEVGYGLQAYLDPILRCFAAALAKYQTRSLIVLYDTIGTLADNAGTCLAQPALLAVLMPPLMQRWNQVTD 531
            QERL+STD W  RES +LALGA +EGC++G+ PHLP LF +L+   +   P +RSI CW LGR+  W VS    E  L P++ G++ RVLD NKKVQ AACSA   +EEE    L  YL PIL     A  +YQ R+L++LYD IGTLAD+ G  L  P L+AV MPPL+ +WN + D
Sbjct:  414 QERLSSTDHWRVRESGILALGAIAEGCMEGIVPHLPQLFPYLLTLMEDPAPYIRSITCWTLGRYANWAVSLNDHEHVLKPLMEGMLRRVLDPNKKVQTAACSAFCTLEEEAADDLIPYLGPILHNLMYAFGRYQARNLLILYDAIGTLADSVGDALNHPELIAVFMPPLIAKWNAIPD 591
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14628.3559.1 vs. uniprot
Match: A0A6G0WW44_9STRA (Importin N-terminal domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WW44_9STRA)

HSP 1 Score: 194 bits (493), Expect = 2.280e-54
Identity = 92/178 (51.69%), Postives = 119/178 (66.85%), Query Frame = 1 
Query:    1 QERLASTDVWH-RESAMLALGAASEGCLDGLGPHLPLLFDFLIQQQKAETPQLRSIACWVLGRFMRWIVSQESEERYLVPVLRGLVERVLDGNKKVQEAACSAMSVMEEEVGYGLQAYLDPILRCFAAALAKYQTRSLIVLYDTIGTLADNAGTCLAQPALLAVLMPPLMQRWNQVTD 531
            QERL++T  W  RES +LALGA +EGC++G+ PHLP LF +L+   +   P +RSI CW LGR+  W+VS    E YL P++ G++ RVLD NKKVQ AACSA   +EEE    L  YL PIL     A  +YQ R+L++LYD IGTLAD+ G  L  P L+AV MPPL+ +WN + D
Sbjct:  426 QERLSNTGHWCVRESGILALGAIAEGCMEGVVPHLPQLFPYLLTLMEDPAPYIRSITCWTLGRYANWVVSLNDHEHYLKPLMEGMLRRVLDHNKKVQTAACSAFCTLEEEAAEDLIPYLAPILHNLMFAFGRYQARNLLILYDAIGTLADSVGDALNHPELIAVFMPPLIAKWNAIAD 603
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BLAST of mRNA_H-canaliculatus_F_contig14628.3559.1 vs. uniprot
Match: A0A3R6YH87_9STRA (Importin N-terminal domain-containing protein n=13 Tax=Aphanomyces TaxID=100860 RepID=A0A3R6YH87_9STRA)

HSP 1 Score: 193 bits (491), Expect = 4.440e-54
Identity = 94/178 (52.81%), Postives = 118/178 (66.29%), Query Frame = 1 
Query:    1 QERLASTDVWH-RESAMLALGAASEGCLDGLGPHLPLLFDFLIQQQKAETPQLRSIACWVLGRFMRWIVSQESEERYLVPVLRGLVERVLDGNKKVQEAACSAMSVMEEEVGYGLQAYLDPILRCFAAALAKYQTRSLIVLYDTIGTLADNAGTCLAQPALLAVLMPPLMQRWNQVTD 531
            QERLA+T  W  RES +LALGA +EGC+DG+ PHLP LF +L+   +   P +RSI CW LGR+  W VS    E  L P++  ++ERVLDGNKKVQ AACSA   +EEE    L  YL PIL     A  +YQ R+L++LYD IGTLAD+ G  L  P L+AV MPPL+ +W+ V D
Sbjct:  432 QERLANTGHWSVRESGILALGAIAEGCMDGVVPHLPTLFPYLLTLMRDPAPYIRSITCWTLGRYANWAVSLNDHEHVLKPLMTAMLERVLDGNKKVQTAACSAFCTLEEEAADDLIPYLAPILHNLMFAFGRYQARNLLILYDAIGTLADSVGEALNYPDLIAVFMPPLIAKWHAVAD 609
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14628.3559.1 vs. uniprot
Match: M5BX71_THACB (Rhizoctonia solani AG1-IB WGS project CAOJ00000000 data, isolate 7/3/14, contig 12774 n=1 Tax=Thanatephorus cucumeris (strain AG1-IB / isolate 7/3/14) TaxID=1108050 RepID=M5BX71_THACB)

HSP 1 Score: 181 bits (458), Expect = 5.380e-54
Identity = 88/180 (48.89%), Postives = 119/180 (66.11%), Query Frame = 1 
Query:    1 QERLASTDVWHRESAMLALGAASEGCLDGLGPHLPLLFDFLIQQQKAETPQLRSIACWVLGRFMRWIVSQESEE---RYLVPVLRGLVERVLDGNKKVQEAACSAMSVMEEEVGYGLQAYLDPILRCFAAALAKYQTRSLIVLYDTIGTLADNAGTCLAQPALLAVLMPPLMQRWNQVTD 531
            ++RL S D   RES +LALGA +EGC++ + P+L  L  FLI       P +RSI CW LGR+  W  S  SEE   +Y VP + GL+  VLD NK+VQEA CSA + +EE+ G  L+ YLDPILR    A  KYQ ++L++LYD IGTLAD  G+ L +  +L VLMPPL++RW ++++
Sbjct:    5 RDRLWSQDWIQRESGILALGAMAEGCIEAIEPYLAELIPFLINTLNDSKPLVRSITCWTLGRYASWCTSNPSEEHRNKYFVPAMEGLLRMVLDNNKRVQEAGCSAFATLEEDAGPALEPYLDPILRNLVFAFQKYQAKNLLILYDAIGTLADAVGSSLNRKEVLDVLMPPLVERWGRLSN 184
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BLAST of mRNA_H-canaliculatus_F_contig14628.3559.1 vs. uniprot
Match: A0A316UUN2_9BASI (ARM repeat-containing protein n=1 Tax=Jaminaea rosea TaxID=1569628 RepID=A0A316UUN2_9BASI)

HSP 1 Score: 191 bits (485), Expect = 3.740e-53
Identity = 88/181 (48.62%), Postives = 125/181 (69.06%), Query Frame = 1 
Query:    1 QERLASTDVWHRESAMLALGAASEGCLDGLGPHLPLLFDFLIQQQKAETPQLRSIACWVLGRFMRWIVSQESEER---YLVPVLRGLVERVLDGNKKVQEAACSAMSVMEEEVGYGLQAYLDPILRCFAAALAKYQTRSLIVLYDTIGTLADNAGTCL-AQPALLAVLMPPLMQRWNQVTD 531
            +ERL S D   RES +LALGA +EGC+ G+ PHLP L  FL+       P +RSIACW LGR+  W ++ +S+E    + +P + GL+  V+D NK+VQEA CSA + +EEE G GL+ +L+P+LR  AAA AKYQ ++L++LYD IGTLAD+ G  L ++P  + +LMPPL+ +W ++ D
Sbjct:  442 KERLFSPDWMQRESGILALGAIAEGCIGGIQPHLPTLIPFLVSSLSDSKPLVRSIACWTLGRYSSWCIADKSDEHLRSFFLPAMEGLLNMVMDNNKRVQEAGCSAFATLEEEAGSGLEPFLEPVLRTLAAAFAKYQQKNLLILYDAIGTLADSVGQALGSRPEYVDILMPPLIAKWGELPD 622
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14628.3559.1 vs. uniprot
Match: A0A427YRE4_9TREE (Importin N-terminal domain-containing protein n=1 Tax=Saitozyma podzolica TaxID=1890683 RepID=A0A427YRE4_9TREE)

HSP 1 Score: 190 bits (482), Expect = 7.520e-53
Identity = 90/179 (50.28%), Postives = 122/179 (68.16%), Query Frame = 1 
Query:    1 QERLASTDVWHRESAMLALGAASEGCLDGLGPHLPLLFDFLIQQQKAETPQLRSIACWVLGRFMRWIVSQESEER--YLVPVLRGLVERVLDGNKKVQEAACSAMSVMEEEVGYGLQAYLDPILRCFAAALAKYQTRSLIVLYDTIGTLADNAGTCLAQPALLAVLMPPLMQRWNQVTD 531
            ++RL S +   RES +LALGA +EGC+ GL PHLP L  +LIQ  K +   +RSI CW LGR+  W V    E++  + +P + GL++ VLDGNK+VQEA CSA + +EEE G  LQ YL+PIL     A  KYQ ++L++LYD +GTLAD+ G+ L QPA L +LMPPL+ RW ++ D
Sbjct:  424 KDRLFSEEWEQRESGVLALGAIAEGCIQGLEPHLPQLVPWLIQSLKDKKALVRSITCWTLGRYSSWAVQSHPEDKSLFFIPTMEGLLQMVLDGNKRVQEAGCSAFATLEEEAGIELQPYLEPILHNLTFAFNKYQQKNLLILYDALGTLADSVGSALGQPAYLDILMPPLIDRWMKLGD 602
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14628.3559.1 vs. uniprot
Match: A0A316Z9H6_9BASI (ARM repeat-containing protein n=1 Tax=Tilletiopsis washingtonensis TaxID=58919 RepID=A0A316Z9H6_9BASI)

HSP 1 Score: 190 bits (482), Expect = 8.230e-53
Identity = 89/180 (49.44%), Postives = 121/180 (67.22%), Query Frame = 1 
Query:    1 QERLASTDVWHRESAMLALGAASEGCLDGLGPHLPLLFDFLIQQQKAETPQLRSIACWVLGRFMRWIVSQ---ESEERYLVPVLRGLVERVLDGNKKVQEAACSAMSVMEEEVGYGLQAYLDPILRCFAAALAKYQTRSLIVLYDTIGTLADNAGTCLAQPALLAVLMPPLMQRWNQVTD 531
            +ERL S +   RES +LALGA +EGC++G+ PHLP L  FLI   K   P +RSIACW LGR+  W V+    E +++Y +P + GL+  VLDGNK+VQEA CSA + +EEE G  LQ YL P+L+    A  KYQ ++L++LYD IGTLAD+ G  L QP  + ++MPPL+ +W  + D
Sbjct:  427 KERLFSPEWLQRESGILALGAIAEGCIEGVQPHLPTLVPFLINCLKDPKPLVRSIACWTLGRYSAWCVATKTPEHQQQYFLPAMEGLLSMVLDGNKRVQEAGCSAFATLEEEAGADLQPYLQPVLKTLVFAFDKYQQKNLLILYDAIGTLADSVGAALNQPEFVEIIMPPLIAKWQTLED 606
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14628.3559.1 vs. uniprot
Match: A0A8K0JM43_9TREE (Uncharacterized protein n=1 Tax=Filobasidium floriforme TaxID=5210 RepID=A0A8K0JM43_9TREE)

HSP 1 Score: 189 bits (480), Expect = 1.410e-52
Identity = 91/181 (50.28%), Postives = 122/181 (67.40%), Query Frame = 1 
Query:    1 QERLASTDVWHRESAMLALGAASEGCLDGLGPHLPLLFDFLIQQQKAETPQLRSIACWVLGRFMRWIVSQ----ESEERYLVPVLRGLVERVLDGNKKVQEAACSAMSVMEEEVGYGLQAYLDPILRCFAAALAKYQTRSLIVLYDTIGTLADNAGTCLAQPALLAVLMPPLMQRWNQVTD 531
            +++L STD   +ES++LALGA +EGC+DGL PHLP L  FLI       P +RSI CW +GR+  WIV Q       + Y VPVL GL+  +LD NK+VQEA CSA + +EEE G  L+ Y+ PIL+   AA  KYQ R+L++LYD IGTLAD+ G  L++   L VL+PPLMQ+W  +++
Sbjct:  419 RDKLFSTDWLQKESSILALGAIAEGCMDGLVPHLPTLLPFLIGALSDPKPLVRSITCWTIGRYSSWIVEQVDSGNGRDAYFVPVLEGLLRMILDPNKRVQEAGCSAFATLEEEAGTALEPYMQPILQSLVAAFHKYQQRNLLILYDAIGTLADSVGPALSKEEHLQVLIPPLMQKWLSLSN 599
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14628.3559.1 vs. uniprot
Match: A0A7S3BYR7_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BYR7_9EUKA)

HSP 1 Score: 184 bits (467), Expect = 1.820e-52
Identity = 90/178 (50.56%), Postives = 124/178 (69.66%), Query Frame = 1 
Query:    1 QERLASTDVWHRESAMLALGAASEGCLDGLGPHLPLLFDFLIQQQKAETPQLRSIACWVLGRFMRWIVSQESEER-YLVPVLRGLVERVLDGNKKVQEAACSAMSVMEEEVGYGLQAYLDPILRCFAAALAKYQTRSLIVLYDTIGTLADNAGTCLAQPALLAVLMPPLMQRWNQVTD 531
            QERLAS     RES +LALGA +EGC+D + P+LP L  +LIQ      P +RSI CW L R+ +W+V+Q+ E+  YL P+++ L++RVLD NKKVQEAACSA + +EE+    L  YL+PILR    A  KYQ ++L++LYD +GTLAD+ G+ L +   + +LMPPL+ RWN +TD
Sbjct:   44 QERLASPQWEVRESGILALGAIAEGCIDHMTPYLPQLTPWLIQTLNDPKPLIRSITCWTLSRYSKWVVAQQQEQDVYLRPLMQELLKRVLDHNKKVQEAACSAFATLEEDASLSLVPYLEPILRNLMFACEKYQAKNLLILYDAVGTLADSVGSELNREPYVQILMPPLIARWNMLTD 221
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14628.3559.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L470_9PHAE7.080e-10689.27Importin N-terminal domain-containing protein n=2 ... [more]
A0A485KZ57_9STRA1.570e-5452.25Aste57867_13736 protein n=1 Tax=Aphanomyces stella... [more]
A0A6G0WW44_9STRA2.280e-5451.69Importin N-terminal domain-containing protein n=1 ... [more]
A0A3R6YH87_9STRA4.440e-5452.81Importin N-terminal domain-containing protein n=13... [more]
M5BX71_THACB5.380e-5448.89Rhizoctonia solani AG1-IB WGS project CAOJ00000000... [more]
A0A316UUN2_9BASI3.740e-5348.62ARM repeat-containing protein n=1 Tax=Jaminaea ros... [more]
A0A427YRE4_9TREE7.520e-5350.28Importin N-terminal domain-containing protein n=1 ... [more]
A0A316Z9H6_9BASI8.230e-5349.44ARM repeat-containing protein n=1 Tax=Tilletiopsis... [more]
A0A8K0JM43_9TREE1.410e-5250.28Uncharacterized protein n=1 Tax=Filobasidium flori... [more]
A0A7S3BYR7_9EUKA1.820e-5250.56Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14628contigH-canaliculatus_F_contig14628:193..2016 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score329.7
Seed ortholog evalue8.3e-88
Seed eggNOG ortholog2880.D8LLU7
Preferred nameTNPO1
KEGG koko:K10265,ko:K18727,ko:K18752
KEGG TC1.I.1
GOsGO:0000060,GO:0000166,GO:0000278,GO:0000280,GO:0001882,GO:0001883,GO:0002164,GO:0002376,GO:0002520,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005737,GO:0005819,GO:0005829,GO:0005856,GO:0005929,GO:0005933,GO:0005934,GO:0005935,GO:0006606,GO:0006607,GO:0006610,GO:0006810,GO:0006886,GO:0006913,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0007049,GO:0007275,GO:0008104,GO:0008139,GO:0008150,GO:0008565,GO:0009791,GO:0009892,GO:0009894,GO:0009987,GO:0010458,GO:0010468,GO:0010605,GO:0010608,GO:0010629,GO:0010970,GO:0012505,GO:0015031,GO:0015630,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016441,GO:0016458,GO:0017038,GO:0017076,GO:0019001,GO:0019219,GO:0019222,GO:0022402,GO:0022607,GO:0022613,GO:0022618,GO:0030030,GO:0030031,GO:0030097,GO:0030427,GO:0030705,GO:0031047,GO:0031090,GO:0031224,GO:0031323,GO:0031329,GO:0031503,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032386,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033157,GO:0033218,GO:0033365,GO:0034399,GO:0034504,GO:0034613,GO:0034622,GO:0035166,GO:0035167,GO:0035194,GO:0035195,GO:0035280,GO:0035639,GO:0035735,GO:0036094,GO:0040029,GO:0042073,GO:0042277,GO:0042306,GO:0042886,GO:0042995,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043487,GO:0043488,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044770,GO:0044772,GO:0044782,GO:0045184,GO:0045595,GO:0045596,GO:0046822,GO:0046907,GO:0048285,GO:0048513,GO:0048519,GO:0048523,GO:0048534,GO:0048542,GO:0048569,GO:0048731,GO:0048732,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0051049,GO:0051093,GO:0051147,GO:0051148,GO:0051169,GO:0051170,GO:0051171,GO:0051179,GO:0051223,GO:0051233,GO:0051234,GO:0051252,GO:0051641,GO:0051649,GO:0060255,GO:0060271,GO:0060341,GO:0061013,GO:0061608,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070201,GO:0070727,GO:0070922,GO:0070925,GO:0071702,GO:0071705,GO:0071826,GO:0071840,GO:0072594,GO:0072686,GO:0080090,GO:0090087,GO:0097159,GO:0097367,GO:0099111,GO:0120025,GO:0120031,GO:0120036,GO:0140014,GO:0140104,GO:0140142,GO:1900180,GO:1901265,GO:1901363,GO:1903047,GO:1903311,GO:1903827,GO:1904589,GO:1990023
EggNOG free text desc.ribosomal protein import into nucleus
EggNOG OGsKOG2023@1,KOG2023@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009,ko03019,ko04121
Hectar predicted targeting categoryother localisation
Exons4
Model size531
Cds size531
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14628.3559.1prot_H-canaliculatus_F_contig14628.3559.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig14628 193..2016 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929211.8319001-CDS-H-canaliculatus_F_contig14628:192..3551622929211.8319001-CDS-H-canaliculatus_F_contig14628:192..355Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14628 193..355 -
1696845719.7007413-CDS-H-canaliculatus_F_contig14628:192..3551696845719.7007413-CDS-H-canaliculatus_F_contig14628:192..355Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14628 193..355 -
1622929211.8522172-CDS-H-canaliculatus_F_contig14628:721..8071622929211.8522172-CDS-H-canaliculatus_F_contig14628:721..807Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14628 722..807 -
1696845719.7219176-CDS-H-canaliculatus_F_contig14628:721..8071696845719.7219176-CDS-H-canaliculatus_F_contig14628:721..807Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14628 722..807 -
1622929211.868695-CDS-H-canaliculatus_F_contig14628:1274..13621622929211.868695-CDS-H-canaliculatus_F_contig14628:1274..1362Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14628 1275..1362 -
1696845719.735314-CDS-H-canaliculatus_F_contig14628:1274..13621696845719.735314-CDS-H-canaliculatus_F_contig14628:1274..1362Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14628 1275..1362 -
1622929211.931603-CDS-H-canaliculatus_F_contig14628:1822..20161622929211.931603-CDS-H-canaliculatus_F_contig14628:1822..2016Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14628 1823..2016 -
1696845719.7460036-CDS-H-canaliculatus_F_contig14628:1822..20161696845719.7460036-CDS-H-canaliculatus_F_contig14628:1822..2016Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14628 1823..2016 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig14628.3559.1

>prot_H-canaliculatus_F_contig14628.3559.1 ID=prot_H-canaliculatus_F_contig14628.3559.1|Name=mRNA_H-canaliculatus_F_contig14628.3559.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=177bp
QERLASTDVWHRESAMLALGAASEGCLDGLGPHLPLLFDFLIQQQKAETP
QLRSIACWVLGRFMRWIVSQESEERYLVPVLRGLVERVLDGNKKVQEAAC
SAMSVMEEEVGYGLQAYLDPILRCFAAALAKYQTRSLIVLYDTIGTLADN
AGTCLAQPALLAVLMPPLMQRWNQVTD
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mRNA from alignment at H-canaliculatus_F_contig14628:193..2016-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig14628.3559.1 ID=mRNA_H-canaliculatus_F_contig14628.3559.1|Name=mRNA_H-canaliculatus_F_contig14628.3559.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1824bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14628:193..2016- (Hapterophycus canaliculatus Oshoro5f female)
CAGGAGCGGCTAGCGAGCACAGACGTGTGGCACCGAGAGAGCGCGATGTT
AGCCCTGGGAGCGGCCTCGGAGGGCTGCCTAGACGGGCTCGGGCCACACC
TCCCACTGCTGTTTGACTTCCTCATCCAGCAGCAGAAAGCGGAGACACCC
CAGCTCCGGAGTATCGCTTGCTGGGTCCTGGGTCGGTTTATGAGGTGCGT
GCTGTTCTCGGTACACGTACGTGGTGAGCGCGTCTGTCGGTCCCTGGGTA
GATTTGTCAGCAAGGGTGTAGGCGGTTCTTTGCGCATGCGAGTATCGTGT
GCCGTGCGAAGCGTTGGAGATGTAGACTCCGAGAGACAACTCGACGATCC
CGGTATGCCTGTGGATGAATGCCGTGTCGGGATGAAGTCGGGCTTTACAT
CGCAAAGCTTGATGGCGTGCTGGCGTGCCTCTGCCGCTCCCTGGCAGGCA
TGCATGCGTGCGTACGACGGGAGATGTAGCGACGATCCAAAAACGCCCTC
ATCAACGAGGGGAGATCTCTCTCTCTCTTTCGTTGCGCTTGAGGACGCCG
TTGTCGCACGGCAGCCTGCACCAGGCACCCCAAACGTAAATCGTGCGCCT
CGCCTCCCACTGCCCTGCCCCCTCTGTCTACCCCTTTCCGCCCCCGCCCT
CCAGGTGGATCGTGAGCCAGGAGTCCGAGGAGCGCTACCTGGTACCGGTG
CTGAGGGGGTTGGTGGAGCGAGTTCTTGACGGCAACAAGAAGGTGCGTAC
ACCTGCCGCACGAAAAAGAGGCGGAATCGAGGGGGGGGGGGGGGGGGTGC
GGACCGGAGAAGCAAACAGGAATGGTTTGGTGATTGGTGCCGCGAACCCG
ATGCTTTTGGCGGGGGGGGGGGTGGGTCGGGTGGTTGGGGTGAGGGGGAA
GAAGGGGGGGCGGGGGGGTGGGGGGGAGGGGGGGGGGGGTGGGGTGGGGG
GGGTGTGGGGTGGGCTGCGAGACGAAGAACGAACACGAAGATGTTTTGTG
CATCGGTCCGCAAACGCGATGCTTTGCGCGGGGGGGGGTTGAGGACAGGC
AGGGCCAAGCTTGGTGGGGCGCGGACAGGTTTGTTCGGCGGACAGGAAAG
CGTCGAAGGAAGGAGAGAAAGCTGGAAATCCCCCCCCCCCGTCGTGCCAA
CGTCGCAACCAAGATGACGAGTGTCCTCTAACAAATCGCGGGATGCCGAA
CAACCGCAGGTGCAAGAGGCGGCGTGTTCCGCCATGTCGGTGATGGAGGA
AGAGGTCGGTTACGGCCTGCAGGCCTACCTCGACCCCATCCTGAGGTGCG
TGCATGGCCCGGGGTGCACTTTTGGTCTGGTCGACCCTCTTTGTTTGCCC
CCGGCCGTCGCAAGTTGTGCGGCGTTGTTTTCCTGCTTGGCGCGCACTCC
CTCGCTCCCTCGTGCCAAGACCTTGCCCGACCTATGAGAATGGGCGGACG
GGATCAGCCGCCCCTCGCGCCGGCGAGCCCTCTAGCCGCCGGAGCATGCC
GCCCGAACGACGGCACCCTTACTCCGAGCGAGGAAGCACTTTGAGGTCAC
GCTGACTATCTCAGCGACGATATTGGAGCATCTTGCTCCAGGCAAGAGAG
GATTCTTTGGACGACGCTAACTCTCTCAGCGACGAACCGATCGGGAACGA
AATCGGCGCAGGTGCTTCGCCGCGGCGCTGGCCAAGTACCAGACCCGGAG
CCTGATCGTGCTGTACGACACCATCGGGACCCTCGCCGACAACGCCGGCA
CCTGCCTCGCTCAGCCGGCCCTCCTGGCCGTGCTGATGCCGCCCCTCATG
CAGAGGTGGAACCAGGTGACAGAC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14628:193..2016-

>mRNA_H-canaliculatus_F_contig14628.3559.1 ID=mRNA_H-canaliculatus_F_contig14628.3559.1|Name=mRNA_H-canaliculatus_F_contig14628.3559.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1062bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14628:193..2016- (Hapterophycus canaliculatus Oshoro5f female)
CAGGAGCGGCTAGCGAGCACAGACGTGTGGCACCGAGAGAGCGCGATGTT
AGCCCTGGGAGCGGCCTCGGAGGGCTGCCTAGACGGGCTCGGGCCACACC
TCCCACTGCTGTTTGACTTCCTCATCCAGCAGCAGAAAGCGGAGACACCC
CAGCTCCGGAGTATCGCTTGCTGGGTCCTGGGTCGGTTTATGAGCAGGAG
CGGCTAGCGAGCACAGACGTGTGGCACCGAGAGAGCGCGATGTTAGCCCT
GGGAGCGGCCTCGGAGGGCTGCCTAGACGGGCTCGGGCCACACCTCCCAC
TGCTGTTTGACTTCCTCATCCAGCAGCAGAAAGCGGAGACACCCCAGCTC
CGGAGTATCGCTTGCTGGGTCCTGGGTCGGTTTATGAGGTGGATCGTGAG
CCAGGAGTCCGAGGAGCGCTACCTGGTACCGGTGCTGAGGGGGTTGGTGG
AGCGAGTTCTTGACGGCAACAAGAAGGTGGATCGTGAGCCAGGAGTCCGA
GGAGCGCTACCTGGTACCGGTGCTGAGGGGGTTGGTGGAGCGAGTTCTTG
ACGGCAACAAGAAGGTGCAAGAGGCGGCGTGTTCCGCCATGTCGGTGATG
GAGGAAGAGGTCGGTTACGGCCTGCAGGCCTACCTCGACCCCATCCTGAG
GTGCAAGAGGCGGCGTGTTCCGCCATGTCGGTGATGGAGGAAGAGGTCGG
TTACGGCCTGCAGGCCTACCTCGACCCCATCCTGAGGTGCTTCGCCGCGG
CGCTGGCCAAGTACCAGACCCGGAGCCTGATCGTGCTGTACGACACCATC
GGGACCCTCGCCGACAACGCCGGCACCTGCCTCGCTCAGCCGGCCCTCCT
GGCCGTGCTGATGCCGCCCCTCATGCAGAGGTGGAACCAGGTGACAGACG
TGCTTCGCCGCGGCGCTGGCCAAGTACCAGACCCGGAGCCTGATCGTGCT
GTACGACACCATCGGGACCCTCGCCGACAACGCCGGCACCTGCCTCGCTC
AGCCGGCCCTCCTGGCCGTGCTGATGCCGCCCCTCATGCAGAGGTGGAAC
CAGGTGACAGAC
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