mRNA_H-canaliculatus_F_contig14593.3535.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig14593.3535.1
Unique NamemRNA_H-canaliculatus_F_contig14593.3535.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14593.3535.1 vs. uniprot
Match: D8LBW0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBW0_ECTSI)

HSP 1 Score: 459 bits (1181), Expect = 6.160e-155
Identity = 227/229 (99.13%), Postives = 228/229 (99.56%), Query Frame = 1 
Query:    1 GRLEIFRIHTRNMKLDDDVDPEAIARETHGFVGADIAALCTEAAMQCIREKMDLIDIEEETIDAEVLDAMAVSMDHFRFSLGVSNPSSLRETVVEVPTVTWNDIGGLAGVKRELQELVQYPVEHPEKFEKFGMSPSRGVLFYGPPGCGKTLMAKAVANECQANFISVKGPELLTMWFGESEANVRDVFEKARAAAPCVLFFDELDSIAQQRGGSSGDGGGAADRVMNQV 687
            GRLEIFRIHTRNMKLDDDVDPEAIARETHGFVGADIAALCTEAAMQCIREKMDLIDIEEETIDAEVLDAMAVSMDHFRFSLGVSNPSSLRETVVEVPTVTWNDIGGLAGVKRELQELVQYPVEHPEKFEKFGMSPSRGVLFYGPPGCGKTLMAKAVANECQANFISVKGPELLTMWFGESEANVRDVFEKARAAAPCVLFFDELDSIA QRGGSSGDGGGAADRVMNQ+
Sbjct:  396 GRLEIFRIHTRNMKLDDDVDPEAIARETHGFVGADIAALCTEAAMQCIREKMDLIDIEEETIDAEVLDAMAVSMDHFRFSLGVSNPSSLRETVVEVPTVTWNDIGGLAGVKRELQELVQYPVEHPEKFEKFGMSPSRGVLFYGPPGCGKTLMAKAVANECQANFISVKGPELLTMWFGESEANVRDVFEKARAAAPCVLFFDELDSIAGQRGGSSGDGGGAADRVMNQL 624
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14593.3535.1 vs. uniprot
Match: A0A836CHQ0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHQ0_9STRA)

HSP 1 Score: 442 bits (1136), Expect = 2.060e-148
Identity = 215/229 (93.89%), Postives = 223/229 (97.38%), Query Frame = 1 
Query:    1 GRLEIFRIHTRNMKLDDDVDPEAIARETHGFVGADIAALCTEAAMQCIREKMDLIDIEEETIDAEVLDAMAVSMDHFRFSLGVSNPSSLRETVVEVPTVTWNDIGGLAGVKRELQELVQYPVEHPEKFEKFGMSPSRGVLFYGPPGCGKTLMAKAVANECQANFISVKGPELLTMWFGESEANVRDVFEKARAAAPCVLFFDELDSIAQQRGGSSGDGGGAADRVMNQV 687
            GRLEIFRIHTRNMKLD+DVDPEAIARETHGFVGAD+AALCTEAAMQCIREKMDLIDIEEE+IDAEVLDAMAVS DHFRF+LGVSNPSSLRETVVEVP V+W DIGGL GVKRELQELVQYPVEHPEKFEKFGMSPSRGVLFYGPPGCGKTLMAKAVANECQANFIS+KGPELLTMWFGESEANVRDVFEKARA+APCVLFFDELDSIAQQRGG SGDGGGA DRVMNQ+
Sbjct:  370 GRLEIFRIHTRNMKLDEDVDPEAIARETHGFVGADMAALCTEAAMQCIREKMDLIDIEEESIDAEVLDAMAVSQDHFRFALGVSNPSSLRETVVEVPNVSWEDIGGLEGVKRELQELVQYPVEHPEKFEKFGMSPSRGVLFYGPPGCGKTLMAKAVANECQANFISIKGPELLTMWFGESEANVRDVFEKARASAPCVLFFDELDSIAQQRGGRSGDGGGAGDRVMNQL 598
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14593.3535.1 vs. uniprot
Match: A0A7S3ZZC9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZC9_9STRA)

HSP 1 Score: 432 bits (1111), Expect = 3.780e-148
Identity = 207/229 (90.39%), Postives = 223/229 (97.38%), Query Frame = 1 
Query:    1 GRLEIFRIHTRNMKLDDDVDPEAIARETHGFVGADIAALCTEAAMQCIREKMDLIDIEEETIDAEVLDAMAVSMDHFRFSLGVSNPSSLRETVVEVPTVTWNDIGGLAGVKRELQELVQYPVEHPEKFEKFGMSPSRGVLFYGPPGCGKTLMAKAVANECQANFISVKGPELLTMWFGESEANVRDVFEKARAAAPCVLFFDELDSIAQQRGGSSGDGGGAADRVMNQV 687
            GRLEIFRIHTRNMKLDDDVDPEA+AR+THGFVGAD+AALCTEAAMQCIREKMDLIDI+E+TIDAEVLD+MAV+ DHF+++LGVSNPSSLRETVVEVP VTW+DIGGL  VKREL+ELVQYPVEHPEKFEKFGMSPSRGVLFYGPPGCGKTLMAKAVANECQANFISVKGPELLTMWFGESEANVRD+FEKAR +APCVLFFDELDSIA QRGGSSGDGGGAADRV+NQ+
Sbjct:   81 GRLEIFRIHTRNMKLDDDVDPEAVARDTHGFVGADMAALCTEAAMQCIREKMDLIDIDEDTIDAEVLDSMAVTHDHFKYALGVSNPSSLRETVVEVPNVTWDDIGGLTDVKRELKELVQYPVEHPEKFEKFGMSPSRGVLFYGPPGCGKTLMAKAVANECQANFISVKGPELLTMWFGESEANVRDIFEKARGSAPCVLFFDELDSIAGQRGGSSGDGGGAADRVINQI 309
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14593.3535.1 vs. uniprot
Match: A0A7S1BKQ1_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BKQ1_9STRA)

HSP 1 Score: 437 bits (1123), Expect = 1.950e-146
Identity = 210/229 (91.70%), Postives = 222/229 (96.94%), Query Frame = 1 
Query:    1 GRLEIFRIHTRNMKLDDDVDPEAIARETHGFVGADIAALCTEAAMQCIREKMDLIDIEEETIDAEVLDAMAVSMDHFRFSLGVSNPSSLRETVVEVPTVTWNDIGGLAGVKRELQELVQYPVEHPEKFEKFGMSPSRGVLFYGPPGCGKTLMAKAVANECQANFISVKGPELLTMWFGESEANVRDVFEKARAAAPCVLFFDELDSIAQQRGGSSGDGGGAADRVMNQV 687
            GRLE+FRIHTRNMKLDDDVDPEA+ARETHGFVGADIAALCTEAAMQCIREKMDLIDIE+ETIDAE+LD+MAV+ DHF+ SLGVSNPSSLRETVVEVP +TWNDIGGLA VKR+L+ELVQYPVEHPEKFEKFGMSPS+GVLFYGPPGCGKTLMAKAVANECQANFISVKGPELLTMWFGESEANVRDVFEKAR AAPCVLFFDELDSIAQQRGG  GDGGGAADRVMNQ+
Sbjct:  370 GRLEVFRIHTRNMKLDDDVDPEAVARETHGFVGADIAALCTEAAMQCIREKMDLIDIEDETIDAELLDSMAVNQDHFKHSLGVSNPSSLRETVVEVPNITWNDIGGLADVKRDLKELVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLMAKAVANECQANFISVKGPELLTMWFGESEANVRDVFEKARQAAPCVLFFDELDSIAQQRGGKGGDGGGAADRVMNQL 598
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14593.3535.1 vs. uniprot
Match: A0A482RU90_9ARCH (AAA family ATPase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RU90_9ARCH)

HSP 1 Score: 429 bits (1104), Expect = 5.140e-146
Identity = 206/229 (89.96%), Postives = 220/229 (96.07%), Query Frame = 1 
Query:    1 GRLEIFRIHTRNMKLDDDVDPEAIARETHGFVGADIAALCTEAAMQCIREKMDLIDIEEETIDAEVLDAMAVSMDHFRFSLGVSNPSSLRETVVEVPTVTWNDIGGLAGVKRELQELVQYPVEHPEKFEKFGMSPSRGVLFYGPPGCGKTLMAKAVANECQANFISVKGPELLTMWFGESEANVRDVFEKARAAAPCVLFFDELDSIAQQRGGSSGDGGGAADRVMNQV 687
            GRLEIFRIHTRNMKLDDDVDPE+IA++THGFVGAD+AALCTEAAMQCIREKMDLIDIEEETIDAE+L +MAV  +HF+F+LGVSNPSSLRETVVEVP +TWNDIGGL  VK EL+ELVQYP+EHPEKFEKFGMSPSRGVLFYGPPGCGKTL+AKAVANECQANFISVKGPELLTMWFGESEANVRDVF KARAAAPCVLFFDELDSIAQQRGGS GDGGGAADRVMNQ+
Sbjct:  178 GRLEIFRIHTRNMKLDDDVDPESIAKDTHGFVGADMAALCTEAAMQCIREKMDLIDIEEETIDAEILASMAVRQEHFKFALGVSNPSSLRETVVEVPNITWNDIGGLVDVKNELRELVQYPIEHPEKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVANECQANFISVKGPELLTMWFGESEANVRDVFAKARAAAPCVLFFDELDSIAQQRGGSQGDGGGAADRVMNQL 406
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14593.3535.1 vs. uniprot
Match: A0A7S2V5G4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5G4_9STRA)

HSP 1 Score: 430 bits (1105), Expect = 1.500e-145
Identity = 206/229 (89.96%), Postives = 221/229 (96.51%), Query Frame = 1 
Query:    1 GRLEIFRIHTRNMKLDDDVDPEAIARETHGFVGADIAALCTEAAMQCIREKMDLIDIEEETIDAEVLDAMAVSMDHFRFSLGVSNPSSLRETVVEVPTVTWNDIGGLAGVKRELQELVQYPVEHPEKFEKFGMSPSRGVLFYGPPGCGKTLMAKAVANECQANFISVKGPELLTMWFGESEANVRDVFEKARAAAPCVLFFDELDSIAQQRGGSSGDGGGAADRVMNQV 687
            GRLEIFRIHTRNMKLD+DVDPE IA ETHGFVGAD+AALCTEAAMQCIREKMD+IDIEE+ IDAE+LD+MAVSMDHFRF+LG SNPSSLRETVVEVP ++W+DIGGL  VKRELQELVQYPVEHP+KFEKFGMSPS+GVLFYGPPGCGKTLMAKAVA ECQANF+S+KGPELLTMWFGESEANVRDVFEKARAAAPCVLFFDELDSIAQQRGGSSGDGGGAADRVMNQ+
Sbjct:  236 GRLEIFRIHTRNMKLDEDVDPEQIANETHGFVGADMAALCTEAAMQCIREKMDVIDIEEDNIDAEILDSMAVSMDHFRFALGTSNPSSLRETVVEVPNISWDDIGGLEDVKRELQELVQYPVEHPDKFEKFGMSPSKGVLFYGPPGCGKTLMAKAVACECQANFVSIKGPELLTMWFGESEANVRDVFEKARAAAPCVLFFDELDSIAQQRGGSSGDGGGAADRVMNQL 464
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14593.3535.1 vs. uniprot
Match: F0XYY5_AURAN (Uncharacterized protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0XYY5_AURAN)

HSP 1 Score: 433 bits (1113), Expect = 4.460e-145
Identity = 209/229 (91.27%), Postives = 224/229 (97.82%), Query Frame = 1 
Query:    1 GRLEIFRIHTRNMKLDDDVDPEAIARETHGFVGADIAALCTEAAMQCIREKMDLIDIEEETIDAEVLDAMAVSMDHFRFSLGVSNPSSLRETVVEVPTVTWNDIGGLAGVKRELQELVQYPVEHPEKFEKFGMSPSRGVLFYGPPGCGKTLMAKAVANECQANFISVKGPELLTMWFGESEANVRDVFEKARAAAPCVLFFDELDSIAQQRGGSSGDGGGAADRVMNQV 687
            GRLEIFRIHTRNMKLDDDVDPE+IAR+THGFVGAD+AALCTEAAMQCIREKMDLIDI+EETIDAEVLD+MAV+ DHF+++LGVSNPSSLRETVVEVP VTW+DIGGL  VKREL+ELVQYPVEHPEKFEKFGM+PSRGVLFYGPPGCGKTLMAKAVANECQANFISVKGPELLTMWFGESEANVRD+FEKARAAAPCVLFFDELDSIA QRGGSSGDGGGAADRV+NQ+
Sbjct:  371 GRLEIFRIHTRNMKLDDDVDPESIARDTHGFVGADMAALCTEAAMQCIREKMDLIDIDEETIDAEVLDSMAVTQDHFKYALGVSNPSSLRETVVEVPNVTWDDIGGLQDVKRELKELVQYPVEHPEKFEKFGMNPSRGVLFYGPPGCGKTLMAKAVANECQANFISVKGPELLTMWFGESEANVRDLFEKARAAAPCVLFFDELDSIAGQRGGSSGDGGGAADRVINQL 599
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14593.3535.1 vs. uniprot
Match: A0A7S4I1S3_9STRA (Hypothetical protein n=3 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S4I1S3_9STRA)

HSP 1 Score: 430 bits (1105), Expect = 7.650e-145
Identity = 207/229 (90.39%), Postives = 221/229 (96.51%), Query Frame = 1 
Query:    1 GRLEIFRIHTRNMKLDDDVDPEAIARETHGFVGADIAALCTEAAMQCIREKMDLIDIEEETIDAEVLDAMAVSMDHFRFSLGVSNPSSLRETVVEVPTVTWNDIGGLAGVKRELQELVQYPVEHPEKFEKFGMSPSRGVLFYGPPGCGKTLMAKAVANECQANFISVKGPELLTMWFGESEANVRDVFEKARAAAPCVLFFDELDSIAQQRGGSSGDGGGAADRVMNQV 687
            GRLE+FRIHTRNMKLD+DVDPE+IARETHGFVGADIAALCTEAAMQCIREKMDLIDIE+E IDAE+LD+MAV+ DHFR +LGVSNPSSLRETVVEVP VTW+DIGGL  VKR+L+ELVQYPVEHP+KFEKFGMSPS+GVLFYGPPGCGKTLMAKAVANECQANFISVKGPELLTMWFGESEANVRDVFEKAR AAPCVLFFDELDSIAQQRGGS GDGGGAADRVMNQ+
Sbjct:  280 GRLEVFRIHTRNMKLDEDVDPESIARETHGFVGADIAALCTEAAMQCIREKMDLIDIEDEQIDAEILDSMAVNQDHFRHALGVSNPSSLRETVVEVPNVTWDDIGGLEDVKRDLKELVQYPVEHPDKFEKFGMSPSKGVLFYGPPGCGKTLMAKAVANECQANFISVKGPELLTMWFGESEANVRDVFEKARQAAPCVLFFDELDSIAQQRGGSQGDGGGAADRVMNQL 508
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14593.3535.1 vs. uniprot
Match: B8BPW0_THAPS (Uncharacterized protein n=16 Tax=Ochrophyta TaxID=2696291 RepID=B8BPW0_THAPS)

HSP 1 Score: 432 bits (1110), Expect = 1.650e-144
Identity = 208/229 (90.83%), Postives = 222/229 (96.94%), Query Frame = 1 
Query:    1 GRLEIFRIHTRNMKLDDDVDPEAIARETHGFVGADIAALCTEAAMQCIREKMDLIDIEEETIDAEVLDAMAVSMDHFRFSLGVSNPSSLRETVVEVPTVTWNDIGGLAGVKRELQELVQYPVEHPEKFEKFGMSPSRGVLFYGPPGCGKTLMAKAVANECQANFISVKGPELLTMWFGESEANVRDVFEKARAAAPCVLFFDELDSIAQQRGGSSGDGGGAADRVMNQV 687
            GRLE+FRIHTRNMKLD+DVDPEAIARETHGFVGADIAALCTEAAMQCIREKMDLIDIE+E IDAE+LD+MAV+ DHFR +LGVSNPSSLRETVVEVP ++W+DIGGL  VKR+L+ELVQYPVEHPEKFEKFGMSPS+GVLFYGPPGCGKTLMAKAVANECQANFISVKGPELLTMWFGESEANVRDVFEKAR AAPCVLFFDELDSIAQQRGGSSGDGGGAADRVMNQ+
Sbjct:  374 GRLEVFRIHTRNMKLDEDVDPEAIARETHGFVGADIAALCTEAAMQCIREKMDLIDIEDEEIDAEILDSMAVNQDHFRHALGVSNPSSLRETVVEVPNISWDDIGGLEDVKRDLKELVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLMAKAVANECQANFISVKGPELLTMWFGESEANVRDVFEKARQAAPCVLFFDELDSIAQQRGGSSGDGGGAADRVMNQL 602
[Close]
BLAST of mRNA_H-canaliculatus_F_contig14593.3535.1 vs. uniprot
Match: A0A7S2SQ85_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQ85_9STRA)

HSP 1 Score: 429 bits (1102), Expect = 2.840e-143
Identity = 209/229 (91.27%), Postives = 218/229 (95.20%), Query Frame = 1 
Query:    1 GRLEIFRIHTRNMKLDDDVDPEAIARETHGFVGADIAALCTEAAMQCIREKMDLIDIEEETIDAEVLDAMAVSMDHFRFSLGVSNPSSLRETVVEVPTVTWNDIGGLAGVKRELQELVQYPVEHPEKFEKFGMSPSRGVLFYGPPGCGKTLMAKAVANECQANFISVKGPELLTMWFGESEANVRDVFEKARAAAPCVLFFDELDSIAQQRGGSSGDGGGAADRVMNQV 687
            GRLEIFRIHTRNMKLDDDVDPEAIARETHGFVGAD+AALCTEAAMQCIREKMDLIDIEE+TIDAEVLDAMAV  DHF ++LG SNPSSLRETVVEVP  TW+DIGGLA VK EL+ELVQYPVEHPEKFEKFGM PSRGVLFYGPPGCGKTLMAKAVANECQANFISVKGPELLTMWFGESEANVRD+FEKARAAAPCVLFFDELDSIA  RGGSSGDGGGAADRV+NQ+
Sbjct:  389 GRLEIFRIHTRNMKLDDDVDPEAIARETHGFVGADMAALCTEAAMQCIREKMDLIDIEEDTIDAEVLDAMAVCQDHFTYALGQSNPSSLRETVVEVPNTTWDDIGGLADVKSELRELVQYPVEHPEKFEKFGMPPSRGVLFYGPPGCGKTLMAKAVANECQANFISVKGPELLTMWFGESEANVRDIFEKARAAAPCVLFFDELDSIASARGGSSGDGGGAADRVINQL 617
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14593.3535.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBW0_ECTSI6.160e-15599.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CHQ0_9STRA2.060e-14893.89P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S3ZZC9_9STRA3.780e-14890.39Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S1BKQ1_9STRA1.950e-14691.70Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A482RU90_9ARCH5.140e-14689.96AAA family ATPase (Fragment) n=1 Tax=archaeon TaxI... [more]
A0A7S2V5G4_9STRA1.500e-14589.96Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0XYY5_AURAN4.460e-14591.27Uncharacterized protein n=2 Tax=Pelagomonadales Ta... [more]
A0A7S4I1S3_9STRA7.650e-14590.39Hypothetical protein n=3 Tax=Bacillariophyta TaxID... [more]
B8BPW0_THAPS1.650e-14490.83Uncharacterized protein n=16 Tax=Ochrophyta TaxID=... [more]
A0A7S2SQ85_9STRA2.840e-14391.27Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14593contigH-canaliculatus_F_contig14593:402..2536 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score459.5
Seed ortholog evalue9e-127
Seed eggNOG ortholog2880.D8LBW0
Preferred nameVCP
KEGG koko:K13525
KEGG TC3.A.16.1
KEGG Pathwayko04141,ko05134,map04141,map05134
KEGG ModuleM00400,M00403
GOsGO:0000003,GO:0000070,GO:0000151,GO:0000153,GO:0000166,GO:0000226,GO:0000228,GO:0000278,GO:0000280,GO:0000323,GO:0000502,GO:0000731,GO:0000785,GO:0000790,GO:0000819,GO:0000835,GO:0000836,GO:0000837,GO:0000839,GO:0000902,GO:0000904,GO:0001775,GO:0002020,GO:0002082,GO:0002165,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003006,GO:0003674,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005764,GO:0005766,GO:0005767,GO:0005773,GO:0005775,GO:0005776,GO:0005783,GO:0005789,GO:0005811,GO:0005819,GO:0005829,GO:0005856,GO:0005937,GO:0006139,GO:0006140,GO:0006163,GO:0006259,GO:0006281,GO:0006301,GO:0006302,GO:0006355,GO:0006357,GO:0006401,GO:0006457,GO:0006464,GO:0006486,GO:0006487,GO:0006508,GO:0006511,GO:0006515,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006887,GO:0006888,GO:0006914,GO:0006919,GO:0006950,GO:0006955,GO:0006974,GO:0006984,GO:0006986,GO:0006991,GO:0006996,GO:0007010,GO:0007017,GO:0007029,GO:0007030,GO:0007033,GO:0007034,GO:0007040,GO:0007041,GO:0007049,GO:0007051,GO:0007052,GO:0007059,GO:0007154,GO:0007163,GO:0007165,GO:0007275,GO:0007276,GO:0007277,GO:0007279,GO:0007317,GO:0007349,GO:0007399,GO:0007552,GO:0007610,GO:0007626,GO:0008047,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008219,GO:0008333,GO:0008608,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009109,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009166,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009507,GO:0009536,GO:0009605,GO:0009607,GO:0009615,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009886,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010243,GO:0010256,GO:0010467,GO:0010468,GO:0010498,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010604,GO:0010605,GO:0010623,GO:0010628,GO:0010638,GO:0010646,GO:0010647,GO:0010648,GO:0010918,GO:0010921,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012501,GO:0012505,GO:0015031,GO:0015630,GO:0015833,GO:0016020,GO:0016032,GO:0016043,GO:0016070,GO:0016072,GO:0016075,GO:0016192,GO:0016197,GO:0016236,GO:0016237,GO:0016320,GO:0016358,GO:0016462,GO:0016485,GO:0016504,GO:0016567,GO:0016579,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0017144,GO:0018130,GO:0018193,GO:0018196,GO:0018279,GO:0019058,GO:0019079,GO:0019208,GO:0019219,GO:0019220,GO:0019222,GO:0019362,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019674,GO:0019693,GO:0019725,GO:0019867,GO:0019888,GO:0019899,GO:0019902,GO:0019903,GO:0019904,GO:0019941,GO:0019953,GO:0019985,GO:0022008,GO:0022402,GO:0022411,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030030,GO:0030111,GO:0030141,GO:0030154,GO:0030162,GO:0030163,GO:0030177,GO:0030178,GO:0030182,GO:0030234,GO:0030427,GO:0030433,GO:0030554,GO:0030808,GO:0030810,GO:0030968,GO:0030970,GO:0031056,GO:0031058,GO:0031090,GO:0031134,GO:0031175,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031331,GO:0031334,GO:0031396,GO:0031398,GO:0031399,GO:0031401,GO:0031410,GO:0031593,GO:0031625,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0031983,GO:0031984,GO:0032182,GO:0032268,GO:0032270,GO:0032434,GO:0032436,GO:0032446,GO:0032501,GO:0032502,GO:0032504,GO:0032509,GO:0032510,GO:0032527,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0032880,GO:0032933,GO:0032940,GO:0032984,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033182,GO:0033184,GO:0033365,GO:0033554,GO:0034067,GO:0034098,GO:0034214,GO:0034404,GO:0034517,GO:0034613,GO:0034620,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0034660,GO:0034661,GO:0034727,GO:0034774,GO:0034976,GO:0035069,GO:0035096,GO:0035103,GO:0035303,GO:0035304,GO:0035578,GO:0035639,GO:0035770,GO:0035800,GO:0035861,GO:0035966,GO:0035967,GO:0035973,GO:0036094,GO:0036211,GO:0036230,GO:0036266,GO:0036435,GO:0036464,GO:0036503,GO:0036513,GO:0042119,GO:0042175,GO:0042176,GO:0042221,GO:0042287,GO:0042288,GO:0042325,GO:0042327,GO:0042391,GO:0042582,GO:0042592,GO:0042726,GO:0042728,GO:0042802,GO:0042886,GO:0042981,GO:0042995,GO:0043009,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043086,GO:0043130,GO:0043161,GO:0043167,GO:0043168,GO:0043170,GO:0043186,GO:0043207,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043280,GO:0043281,GO:0043299,GO:0043312,GO:0043332,GO:0043412,GO:0043413,GO:0043457,GO:0043467,GO:0043523,GO:0043525,GO:0043531,GO:0043624,GO:0043632,GO:0043666,GO:0043900,GO:0043902,GO:0043903,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044389,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044429,GO:0044430,GO:0044432,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044454,GO:0044455,GO:0044463,GO:0044464,GO:0044703,GO:0044754,GO:0044804,GO:0044877,GO:0045055,GO:0045169,GO:0045184,GO:0045321,GO:0045495,GO:0045595,GO:0045732,GO:0045838,GO:0045862,GO:0045893,GO:0045934,GO:0045935,GO:0045937,GO:0045944,GO:0045981,GO:0045995,GO:0046034,GO:0046434,GO:0046483,GO:0046496,GO:0046596,GO:0046598,GO:0046686,GO:0046700,GO:0046716,GO:0046903,GO:0046907,GO:0048193,GO:0048284,GO:0048285,GO:0048468,GO:0048471,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048524,GO:0048583,GO:0048584,GO:0048585,GO:0048609,GO:0048646,GO:0048666,GO:0048667,GO:0048699,GO:0048707,GO:0048731,GO:0048812,GO:0048813,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050790,GO:0050792,GO:0050793,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051186,GO:0051187,GO:0051228,GO:0051230,GO:0051233,GO:0051234,GO:0051239,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051276,GO:0051286,GO:0051304,GO:0051306,GO:0051336,GO:0051338,GO:0051345,GO:0051348,GO:0051603,GO:0051604,GO:0051640,GO:0051641,GO:0051643,GO:0051649,GO:0051656,GO:0051686,GO:0051704,GO:0051707,GO:0051716,GO:0051788,GO:0051881,GO:0051972,GO:0051974,GO:0052547,GO:0052548,GO:0055085,GO:0055086,GO:0060033,GO:0060090,GO:0060205,GO:0060249,GO:0060255,GO:0060281,GO:0060284,GO:0060293,GO:0060341,GO:0060828,GO:0061024,GO:0061025,GO:0061134,GO:0061136,GO:0061163,GO:0061164,GO:0061165,GO:0061166,GO:0061857,GO:0061912,GO:0061919,GO:0062012,GO:0062013,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070085,GO:0070646,GO:0070647,GO:0070651,GO:0070727,GO:0070841,GO:0070842,GO:0070887,GO:0070987,GO:0071218,GO:0071241,GO:0071248,GO:0071276,GO:0071310,GO:0071501,GO:0071629,GO:0071630,GO:0071702,GO:0071704,GO:0071705,GO:0071712,GO:0071840,GO:0071897,GO:0071985,GO:0072387,GO:0072389,GO:0072521,GO:0072524,GO:0072671,GO:0072686,GO:0080090,GO:0080171,GO:0090085,GO:0090090,GO:0090174,GO:0090263,GO:0090304,GO:0090734,GO:0097159,GO:0097352,GO:0097367,GO:0097708,GO:0098586,GO:0098588,GO:0098772,GO:0098796,GO:0098798,GO:0098799,GO:0098805,GO:0098813,GO:0098827,GO:0099503,GO:0101002,GO:0120025,GO:0120036,GO:0120038,GO:0120039,GO:0140014,GO:0140030,GO:1900180,GO:1900182,GO:1900371,GO:1900373,GO:1900542,GO:1900544,GO:1901135,GO:1901137,GO:1901214,GO:1901216,GO:1901265,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901698,GO:1901800,GO:1902275,GO:1902494,GO:1902680,GO:1902850,GO:1902875,GO:1903003,GO:1903004,GO:1903006,GO:1903007,GO:1903008,GO:1903047,GO:1903050,GO:1903052,GO:1903320,GO:1903322,GO:1903362,GO:1903364,GO:1903429,GO:1903506,GO:1903508,GO:1903513,GO:1903578,GO:1903580,GO:1903715,GO:1903827,GO:1903829,GO:1903862,GO:1903900,GO:1903902,GO:1904288,GO:1904580,GO:1904813,GO:1904949,GO:1905269,GO:1905368,GO:1905369,GO:1905879,GO:1990023,GO:1990112,GO:1990116,GO:1990171,GO:1990234,GO:1990381,GO:1990730,GO:1990904,GO:2000026,GO:2000058,GO:2000060,GO:2000112,GO:2000113,GO:2000116,GO:2000152,GO:2000158,GO:2000241,GO:2000278,GO:2000279,GO:2001056,GO:2001141,GO:2001166,GO:2001168,GO:2001169,GO:2001171,GO:2001252
EggNOG free text desc.ATP binding
EggNOG OGsCOG0464@1,KOG0730@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-20_003470.1
Exons4
Model size687
Cds size687
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14593.3535.1prot_H-canaliculatus_F_contig14593.3535.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig14593 402..2536 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929207.7117515-CDS-H-canaliculatus_F_contig14593:401..5831622929207.7117515-CDS-H-canaliculatus_F_contig14593:401..583Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14593 402..583 -
1696845718.0500789-CDS-H-canaliculatus_F_contig14593:401..5831696845718.0500789-CDS-H-canaliculatus_F_contig14593:401..583Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14593 402..583 -
1622929207.7268538-CDS-H-canaliculatus_F_contig14593:1111..12921622929207.7268538-CDS-H-canaliculatus_F_contig14593:1111..1292Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14593 1112..1292 -
1696845718.0620067-CDS-H-canaliculatus_F_contig14593:1111..12921696845718.0620067-CDS-H-canaliculatus_F_contig14593:1111..1292Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14593 1112..1292 -
1622929207.738143-CDS-H-canaliculatus_F_contig14593:1792..19421622929207.738143-CDS-H-canaliculatus_F_contig14593:1792..1942Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14593 1793..1942 -
1696845718.070765-CDS-H-canaliculatus_F_contig14593:1792..19421696845718.070765-CDS-H-canaliculatus_F_contig14593:1792..1942Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14593 1793..1942 -
1622929207.7599156-CDS-H-canaliculatus_F_contig14593:2362..25361622929207.7599156-CDS-H-canaliculatus_F_contig14593:2362..2536Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14593 2363..2536 -
1696845718.0801208-CDS-H-canaliculatus_F_contig14593:2362..25361696845718.0801208-CDS-H-canaliculatus_F_contig14593:2362..2536Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14593 2363..2536 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig14593.3535.1

>prot_H-canaliculatus_F_contig14593.3535.1 ID=prot_H-canaliculatus_F_contig14593.3535.1|Name=mRNA_H-canaliculatus_F_contig14593.3535.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=229bp
GRLEIFRIHTRNMKLDDDVDPEAIARETHGFVGADIAALCTEAAMQCIRE
KMDLIDIEEETIDAEVLDAMAVSMDHFRFSLGVSNPSSLRETVVEVPTVT
WNDIGGLAGVKRELQELVQYPVEHPEKFEKFGMSPSRGVLFYGPPGCGKT
LMAKAVANECQANFISVKGPELLTMWFGESEANVRDVFEKARAAAPCVLF
FDELDSIAQQRGGSSGDGGGAADRVMNQV
back to top

mRNA from alignment at H-canaliculatus_F_contig14593:402..2536-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig14593.3535.1 ID=mRNA_H-canaliculatus_F_contig14593.3535.1|Name=mRNA_H-canaliculatus_F_contig14593.3535.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2135bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14593:402..2536- (Hapterophycus canaliculatus Oshoro5f female)
GGTCGATTGGAAATCTTCCGTATCCACACACGGAACATGAAGCTGGACGA
CGACGTTGACCCGGAGGCCATCGCGAGGGAGACACACGGGTTCGTCGGGG
CCGACATCGCCGCCCTGTGCACCGAGGCCGCCATGCAGTGCATCCGCGAG
AAGATGGACCTGATCGACATCGAGGTGGGCATCGCGCGGTGGTGTGTTGT
GTGCCGTTTGGCGTGTAACGTCCAGTCGGAGGATGATGGGTGATTTCCGC
GCTCTGACGTAGATGGACTTGTGATACTCGTTTCCCTCTCTCTCTCTATT
CGGCACTAGTGGTGGCTGCTACCCAACACCGTCACCCCTCCAGCCTACAA
AGTTTATTCTCTCTCCCTTTTTCACGAAGCGCGTTCTCAGGCGCTTTGTT
GTCGTCGCCGTTGTTGGCGTCGTGTTTTGGCCCTTGGCCGGGGTGGATGG
TGACTGCCGTCTGACGTACCTAGGCTTGAATGTCTCTTGTCGCGGAATCG
TCGCAGTCGGTATCGAGGTCTCGCTCCCCTCCCGCCCACCGCACGTCTCC
CCCGTTCCTCAAACCGCGGAATTCCTCGACCTTGGCCTCGGCAGGAGGAG
ACCATCGACGCCGAGGTCCTCGACGCGATGGCCGTGAGCATGGACCACTT
CCGCTTCTCCCTCGGAGTGTCCAACCCCTCCTCTCTTCGGGAAACGGTCG
TGGAGGTGCCCACCGTTACCTGGAACGACATCGGAGGCCTGGCGGTGAGA
AAGCAAAGACAAGAGACGTGCGGCGCACACGAGGACGGCTCGGACGTTGC
CGGTCCAACGATAGCAGTGTTTGGCGGAGCCACGGGGGCAGTTGATGGCG
GAGCCACGGGGGCAGTTGAATCGAAAGGCGCACCGCCCAGAAGGTCACCG
CGCTGGCCCCTCGTGTCTTGGTGGGGAGGCGGGCCTGGCAACATGTTCCT
ATTCTCCCTCGAGTCTTGGTTGCCCAACGCGAAGGGTTTCAGGGAAACGC
CCAGCGGCGTCGACCGGGAGGCGCAGTTTCTGTTCTTCTTTCTCGCGGGC
GCGCCCTTTTTTTTTTATTTCGCCAGCGGCAGTGGAGAGGGAGGTTACTC
CCGCCGGAAAGCTCGGTTTCTCCCCCCCGCACCCCCCCCCCCCCCCTTTC
CGCACGCCACCGCGACGACAACTCCGAACCAACCAACCAACCAAGCCCGA
CAAACCGGAATCCGCACTGCGAACACGAAAACGGTATCGATCAGGGTGTC
AAGCGCGAGCTGCAGGAGCTGGTGCAGTACCCGGTGGAGCACCCGGAGAA
GTTCGAGAAGTTCGGCATGTCACCGTCGAGAGGCGTTCTCTTCTACGGGC
CCCCCGGGTGCGGGAAGACCCTCATGGCCAAGGCCGTGGCCAACGAGTGT
CAGGCGAACTTTATCTCCGTCAAGGGTGAGAGAGGAAGAGAGGAACGCCG
CTGCCTCTGTGGGGTGCTGTTTTGGTGTCCGGGCAGGAGGAGGATCGTGC
TGTACGTAGCTCGTGGGGGGTACGAGGTGTTCAAGATGCGCGGGTCGTGA
AACTTGAGGCAGCACGCGGTCAATCCGCCAGCCTCATTCCTTGCGGGCGG
ATTGTGCCCCCAACCCTTTAGAATCGCTGAGGAATATCGTCGTTGCCGAC
GATTATTCTGGCCGCTTGCCCGTGCCTTGTGTCCCCGCTGTCCTTGCCGC
GAACGATGCGATCGATGGCGGTTCATTGTCCGGAGTGGTGTGTGGTCCGA
CCCCCCTGGCTGTCGGCCACTCCCGTCCTGTAGTTTGCGTCGGTGGTGAA
GATCCGGACACTGGACCGTCCCTCCCCCGTGCCTCAATCCGCGCTCGAAA
ACCTTCGAAAACCCTGCAACTCGCATGTCTTCTCTTGTGTGTTTCCGGTG
CCTCGAGAAATTTCCCTGTTGACTCCGTCGGCTCCTGTCTCTTGCCGTGC
CAGGACCCGAGCTGTTGACGATGTGGTTCGGAGAGTCGGAGGCGAACGTC
CGCGACGTGTTCGAGAAGGCGAGGGCGGCCGCGCCGTGCGTGCTGTTCTT
CGACGAGCTCGACTCCATCGCTCAGCAGCGTGGCGGGTCGAGCGGAGACG
GAGGCGGGGCGGCTGACCGCGTGATGAACCAGGTG
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14593:402..2536-

>mRNA_H-canaliculatus_F_contig14593.3535.1 ID=mRNA_H-canaliculatus_F_contig14593.3535.1|Name=mRNA_H-canaliculatus_F_contig14593.3535.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1374bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14593:402..2536- (Hapterophycus canaliculatus Oshoro5f female)
GGTCGATTGGAAATCTTCCGTATCCACACACGGAACATGAAGCTGGACGA
CGACGTTGACCCGGAGGCCATCGCGAGGGAGACACACGGGTTCGTCGGGG
CCGACATCGCCGCCCTGTGCACCGAGGCCGCCATGCAGTGCATCCGCGAG
AAGATGGACCTGATCGACATCGAGGGTCGATTGGAAATCTTCCGTATCCA
CACACGGAACATGAAGCTGGACGACGACGTTGACCCGGAGGCCATCGCGA
GGGAGACACACGGGTTCGTCGGGGCCGACATCGCCGCCCTGTGCACCGAG
GCCGCCATGCAGTGCATCCGCGAGAAGATGGACCTGATCGACATCGAGGA
GGAGACCATCGACGCCGAGGTCCTCGACGCGATGGCCGTGAGCATGGACC
ACTTCCGCTTCTCCCTCGGAGTGTCCAACCCCTCCTCTCTTCGGGAAACG
GTCGTGGAGGTGCCCACCGTTACCTGGAACGACATCGGAGGCCTGGCGGA
GGAGACCATCGACGCCGAGGTCCTCGACGCGATGGCCGTGAGCATGGACC
ACTTCCGCTTCTCCCTCGGAGTGTCCAACCCCTCCTCTCTTCGGGAAACG
GTCGTGGAGGTGCCCACCGTTACCTGGAACGACATCGGAGGCCTGGCGGG
TGTCAAGCGCGAGCTGCAGGAGCTGGTGCAGTACCCGGTGGAGCACCCGG
AGAAGTTCGAGAAGTTCGGCATGTCACCGTCGAGAGGCGTTCTCTTCTAC
GGGCCCCCCGGGTGCGGGAAGACCCTCATGGCCAAGGCCGTGGCCAACGA
GTGTCAGGCGAACTTTATCTCCGTCAAGGGGTGTCAAGCGCGAGCTGCAG
GAGCTGGTGCAGTACCCGGTGGAGCACCCGGAGAAGTTCGAGAAGTTCGG
CATGTCACCGTCGAGAGGCGTTCTCTTCTACGGGCCCCCCGGGTGCGGGA
AGACCCTCATGGCCAAGGCCGTGGCCAACGAGTGTCAGGCGAACTTTATC
TCCGTCAAGGGACCCGAGCTGTTGACGATGTGGTTCGGAGAGTCGGAGGC
GAACGTCCGCGACGTGTTCGAGAAGGCGAGGGCGGCCGCGCCGTGCGTGC
TGTTCTTCGACGAGCTCGACTCCATCGCTCAGCAGCGTGGCGGGTCGAGC
GGAGACGGAGGCGGGGCGGCTGACCGCGTGATGAACCAGGTGGACCCGAG
CTGTTGACGATGTGGTTCGGAGAGTCGGAGGCGAACGTCCGCGACGTGTT
CGAGAAGGCGAGGGCGGCCGCGCCGTGCGTGCTGTTCTTCGACGAGCTCG
ACTCCATCGCTCAGCAGCGTGGCGGGTCGAGCGGAGACGGAGGCGGGGCG
GCTGACCGCGTGATGAACCAGGTG
back to top