mRNA_H-canaliculatus_F_contig14505.3498.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14505.3498.1 vs. uniprot
Match: D7FHV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHV1_ECTSI) HSP 1 Score: 156 bits (394), Expect = 5.290e-46 Identity = 91/94 (96.81%), Postives = 91/94 (96.81%), Query Frame = 1
Query: 1 GGAAGGAGGAATADDPGRLRPGEIDPHPETKPARPDPIDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEAKRLATLQKRRELKAAGIEK 282
GGAAGG GGAA ADDP RLRPGEIDPHPETKPARPDPIDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEAKRLATLQKRRELKAAGIEK
Sbjct: 63 GGAAGGEGGAAMADDPRRLRPGEIDPHPETKPARPDPIDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEAKRLATLQKRRELKAAGIEK 156
BLAST of mRNA_H-canaliculatus_F_contig14505.3498.1 vs. uniprot
Match: A0A6H5L1Z3_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z3_9PHAE) HSP 1 Score: 156 bits (394), Expect = 2.970e-42 Identity = 91/94 (96.81%), Postives = 91/94 (96.81%), Query Frame = 1
Query: 1 GGAAGGAGGAATADDPGRLRPGEIDPHPETKPARPDPIDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEAKRLATLQKRRELKAAGIEK 282
GGAAGG GGAA ADDP RLRPGEIDPHPETKPARPDPIDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEAKRLATLQKRRELKAAGIEK
Sbjct: 111 GGAAGGEGGAAMADDPRRLRPGEIDPHPETKPARPDPIDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEAKRLATLQKRRELKAAGIEK 204
BLAST of mRNA_H-canaliculatus_F_contig14505.3498.1 vs. uniprot
Match: A0A4D6S2N0_9CARY (Cell division cycle 5-like protein (Fragment) n=7 Tax=Reaumuria songarica TaxID=194564 RepID=A0A4D6S2N0_9CARY) HSP 1 Score: 133 bits (334), Expect = 3.490e-37 Identity = 73/80 (91.25%), Postives = 79/80 (98.75%), Query Frame = 1
Query: 40 DDPGRLRPGEIDPHPETKPARPDPIDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEAKRLATLQKRRELKAAGIE 279
DDP +LRPGEIDP+PE+KPARPDP+DMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEA+RLA+LQKRRELKAAGIE
Sbjct: 5 DDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARRLASLQKRRELKAAGIE 84
BLAST of mRNA_H-canaliculatus_F_contig14505.3498.1 vs. uniprot
Match: A0A1D6N2M2_MAIZE (CDC5 protein n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6N2M2_MAIZE) HSP 1 Score: 132 bits (331), Expect = 5.560e-36 Identity = 72/80 (90.00%), Postives = 79/80 (98.75%), Query Frame = 1
Query: 40 DDPGRLRPGEIDPHPETKPARPDPIDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEAKRLATLQKRRELKAAGIE 279
DDP +LRPGEIDP+PE+KPARPDP+DMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEA+RLA+LQKRRELKAAGI+
Sbjct: 117 DDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARRLASLQKRRELKAAGID 196
BLAST of mRNA_H-canaliculatus_F_contig14505.3498.1 vs. uniprot
Match: A0A7S2G092_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G092_9STRA) HSP 1 Score: 137 bits (346), Expect = 8.680e-36 Identity = 75/79 (94.94%), Postives = 78/79 (98.73%), Query Frame = 1
Query: 40 DDPGRLRPGEIDPHPETKPARPDPIDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEAKRLATLQKRRELKAAGI 276
DDP RLRPGEIDPHPETKPARPDPIDMDEDEKEML+EARARLANTRGKKAKRKAREKQLEEAKRLAT+QKRRELKAAG+
Sbjct: 119 DDPRRLRPGEIDPHPETKPARPDPIDMDEDEKEMLAEARARLANTRGKKAKRKAREKQLEEAKRLATMQKRRELKAAGV 197
BLAST of mRNA_H-canaliculatus_F_contig14505.3498.1 vs. uniprot
Match: A0A7S2JAY6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JAY6_9EUKA) HSP 1 Score: 134 bits (336), Expect = 1.030e-35 Identity = 74/81 (91.36%), Postives = 79/81 (97.53%), Query Frame = 1
Query: 37 ADDPGRLRPGEIDPHPETKPARPDPIDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEAKRLATLQKRRELKAAGIE 279
ADDP RLRPGEIDP+PE+KPARPDP+DMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEE++RLA LQKRRELKAAGIE
Sbjct: 116 ADDPRRLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEESRRLAALQKRRELKAAGIE 196
BLAST of mRNA_H-canaliculatus_F_contig14505.3498.1 vs. uniprot
Match: A0A7S0F3V2_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F3V2_9CRYP) HSP 1 Score: 131 bits (330), Expect = 1.360e-35 Identity = 72/81 (88.89%), Postives = 79/81 (97.53%), Query Frame = 1
Query: 37 ADDPGRLRPGEIDPHPETKPARPDPIDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEAKRLATLQKRRELKAAGIE 279
ADDP +LRPGEIDP+PE KPARPDP+DMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEA+RLA+LQKRREL+AAG+E
Sbjct: 117 ADDPRKLRPGEIDPNPEYKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARRLASLQKRRELRAAGVE 197
BLAST of mRNA_H-canaliculatus_F_contig14505.3498.1 vs. uniprot
Match: R1EXI3_EMIHU (Uncharacterized protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EXI3_EMIHU) HSP 1 Score: 134 bits (337), Expect = 1.410e-35 Identity = 75/86 (87.21%), Postives = 82/86 (95.35%), Query Frame = 1
Query: 22 GGAATADDPGRLRPGEIDPHPETKPARPDPIDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEAKRLATLQKRRELKAAGIE 279
G A+ ADDP RLRPGEIDP+PE+KPARPDP+DMD+DEKEMLSEARARLANTRGKKAKRKAREKQLEE++RLA LQKRRELKAAGIE
Sbjct: 115 GDASAADDPRRLRPGEIDPNPESKPARPDPVDMDDDEKEMLSEARARLANTRGKKAKRKAREKQLEESRRLAALQKRRELKAAGIE 200
BLAST of mRNA_H-canaliculatus_F_contig14505.3498.1 vs. uniprot
Match: A0A7R9VSM8_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VSM8_9CHLO) HSP 1 Score: 127 bits (320), Expect = 1.830e-35 Identity = 71/80 (88.75%), Postives = 76/80 (95.00%), Query Frame = 1
Query: 40 DDPGRLRPGEIDPHPETKPARPDPIDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEAKRLATLQKRRELKAAGIE 279
DDP RL+PGEIDP+PE KPARPD +DMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEA+RLA LQK+RELKAAGIE
Sbjct: 81 DDPRRLKPGEIDPNPEAKPARPDAVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARRLAMLQKKRELKAAGIE 160
BLAST of mRNA_H-canaliculatus_F_contig14505.3498.1 vs. uniprot
Match: A0A7S0UQ33_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0UQ33_9CHLO) HSP 1 Score: 131 bits (330), Expect = 1.840e-35 Identity = 72/80 (90.00%), Postives = 78/80 (97.50%), Query Frame = 1
Query: 40 DDPGRLRPGEIDPHPETKPARPDPIDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEAKRLATLQKRRELKAAGIE 279
DDP RLRPGEIDP+PE +PARPDP+DMDEDEKEMLSEA+ARLANTRGKKAKRKAREKQLEEA+RLA+LQKRRELKAAGIE
Sbjct: 117 DDPRRLRPGEIDPNPEARPARPDPVDMDEDEKEMLSEAKARLANTRGKKAKRKAREKQLEEARRLASLQKRRELKAAGIE 196 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14505.3498.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14505.3498.1 >prot_H-canaliculatus_F_contig14505.3498.1 ID=prot_H-canaliculatus_F_contig14505.3498.1|Name=mRNA_H-canaliculatus_F_contig14505.3498.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=94bp GGAAGGAGGAATADDPGRLRPGEIDPHPETKPARPDPIDMDEDEKEMLSEback to top mRNA from alignment at H-canaliculatus_F_contig14505:121..2656- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14505.3498.1 ID=mRNA_H-canaliculatus_F_contig14505.3498.1|Name=mRNA_H-canaliculatus_F_contig14505.3498.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2536bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14505:121..2656- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14505:121..2656- >mRNA_H-canaliculatus_F_contig14505.3498.1 ID=mRNA_H-canaliculatus_F_contig14505.3498.1|Name=mRNA_H-canaliculatus_F_contig14505.3498.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=564bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14505:121..2656- (Hapterophycus canaliculatus Oshoro5f female)back to top |