mRNA_H-canaliculatus_F_contig13640.2934.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig13640.2934.1
Unique NamemRNA_H-canaliculatus_F_contig13640.2934.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig13640.2934.1 vs. uniprot
Match: D8LI47_ECTSI (Sulfhydryl oxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI47_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 9.050e-24
Identity = 43/52 (82.69%), Postives = 44/52 (84.62%), Query Frame = 1 
Query:    1 VGSRLALSLWACQQHNLVNEKIGKPTFQCTLPALDERWKTGKKSCWGGDGAG 156
            V SR+ALSLWACQQHNLVNEKIGKPTF CTLPALDERWK GK SCW G   G
Sbjct:  142 VSSRVALSLWACQQHNLVNEKIGKPTFGCTLPALDERWKKGKPSCWEGGAEG 193
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BLAST of mRNA_H-canaliculatus_F_contig13640.2934.1 vs. uniprot
Match: F0W2L6_9STRA (Sulfhydryl oxidase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W2L6_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 5.050e-18
Identity = 33/49 (67.35%), Postives = 37/49 (75.51%), Query Frame = 1 
Query:    1 VGSRLALSLWACQQHNLVNEKIGKPTFQCTLPALDERWKTGKKSCWGGD 147
            V SR A S+W C+QHNLVNEKIGKP FQC +  L ERW+TGKK CW  D
Sbjct:  121 VESRQAFSMWLCEQHNLVNEKIGKPLFQCNMSTLSERWRTGKKECWDAD 169
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BLAST of mRNA_H-canaliculatus_F_contig13640.2934.1 vs. uniprot
Match: A0A3M6VTY2_9STRA (Sulfhydryl oxidase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VTY2_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.010e-17
Identity = 32/54 (59.26%), Postives = 40/54 (74.07%), Query Frame = 1 
Query:    1 VGSRLALSLWACQQHNLVNEKIGKPTFQCTLPALDERWKTGKKSCWGGDGAGDS 162
            V SR + S+W C+QHN+VN KI KP F+CT+  L+ERW+ GK SCWG DG  DS
Sbjct:   25 VESRTSFSMWLCEQHNIVNRKIHKPMFKCTMENLEERWRKGKPSCWGEDGDEDS 78
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BLAST of mRNA_H-canaliculatus_F_contig13640.2934.1 vs. uniprot
Match: A0A024GDH3_9STRA (Sulfhydryl oxidase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GDH3_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 2.010e-17
Identity = 32/46 (69.57%), Postives = 36/46 (78.26%), Query Frame = 1 
Query:    1 VGSRLALSLWACQQHNLVNEKIGKPTFQCTLPALDERWKTGKKSCW 138
            V SR + SLW C+QHNLVNEKIGKP FQC +  L ERW+TGKK CW
Sbjct:  121 VKSRQSFSLWLCEQHNLVNEKIGKPIFQCNMSTLSERWRTGKKECW 166
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BLAST of mRNA_H-canaliculatus_F_contig13640.2934.1 vs. uniprot
Match: A0A8K1CIJ9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIJ9_PYTOL)

HSP 1 Score: 79.7 bits (195), Expect = 2.550e-17
Identity = 31/50 (62.00%), Postives = 40/50 (80.00%), Query Frame = 1 
Query:    1 VGSRLALSLWACQQHNLVNEKIGKPTFQCTLPALDERWKTGKKSCWGGDG 150
            V SR + SLW C+QHN+VN+KIGK  F+CT+  LDERW+TG+ +CWG DG
Sbjct:  115 VDSRTSFSLWLCEQHNIVNKKIGKKPFECTMKNLDERWRTGRAACWGEDG 164
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BLAST of mRNA_H-canaliculatus_F_contig13640.2934.1 vs. uniprot
Match: H3HAY4_PHYRM (Sulfhydryl oxidase n=2 Tax=Phytophthora TaxID=4783 RepID=H3HAY4_PHYRM)

HSP 1 Score: 79.0 bits (193), Expect = 3.730e-17
Identity = 32/54 (59.26%), Postives = 39/54 (72.22%), Query Frame = 1 
Query:    1 VGSRLALSLWACQQHNLVNEKIGKPTFQCTLPALDERWKTGKKSCWGGDGAGDS 162
            V SR   S+W C+QHN+VN KI KP F+CT+  L+ERW+ GK SCWG DG  DS
Sbjct:  105 VESRTTFSMWLCEQHNIVNRKIHKPVFECTMEKLEERWRKGKPSCWGEDGDEDS 158
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BLAST of mRNA_H-canaliculatus_F_contig13640.2934.1 vs. uniprot
Match: D0N2Y7_PHYIT (Sulfhydryl oxidase n=10 Tax=Phytophthora TaxID=4783 RepID=D0N2Y7_PHYIT)

HSP 1 Score: 77.8 bits (190), Expect = 1.130e-16
Identity = 31/54 (57.41%), Postives = 39/54 (72.22%), Query Frame = 1 
Query:    1 VGSRLALSLWACQQHNLVNEKIGKPTFQCTLPALDERWKTGKKSCWGGDGAGDS 162
            V SR   S+W C+QHN+VN KI KP F+CT+  L+ERW+ GK +CWG DG  DS
Sbjct:  108 VESRTTFSMWLCEQHNIVNRKIHKPVFECTMEKLEERWRKGKPACWGEDGDEDS 161
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BLAST of mRNA_H-canaliculatus_F_contig13640.2934.1 vs. uniprot
Match: A0A5D6Y6J5_9STRA (Sulfhydryl oxidase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6J5_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.300e-16
Identity = 30/54 (55.56%), Postives = 40/54 (74.07%), Query Frame = 1 
Query:    1 VGSRLALSLWACQQHNLVNEKIGKPTFQCTLPALDERWKTGKKSCWGGDGAGDS 162
            V SR++ S W C+QHN+VN KIGKP F C++  LDERW+ G+ +CWG DG  D+
Sbjct:   81 VDSRVSFSQWLCEQHNVVNRKIGKPLFSCSMEKLDERWRKGRPACWGEDGDEDA 134
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BLAST of mRNA_H-canaliculatus_F_contig13640.2934.1 vs. uniprot
Match: G4YVZ9_PHYSP (Sulfhydryl oxidase n=8 Tax=Phytophthora TaxID=4783 RepID=G4YVZ9_PHYSP)

HSP 1 Score: 77.0 bits (188), Expect = 2.250e-16
Identity = 31/54 (57.41%), Postives = 39/54 (72.22%), Query Frame = 1 
Query:    1 VGSRLALSLWACQQHNLVNEKIGKPTFQCTLPALDERWKTGKKSCWGGDGAGDS 162
            V SR   S+W C+QHN+VN KI KP F+CT+  L+ERW+ GK SCWG DG  +S
Sbjct:  108 VESRTTFSMWLCEQHNIVNRKIHKPLFECTMEKLEERWRKGKPSCWGEDGDEES 161
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BLAST of mRNA_H-canaliculatus_F_contig13640.2934.1 vs. uniprot
Match: A0A4D9D9Q7_9STRA (Sulfhydryl oxidase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9Q7_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 2.290e-16
Identity = 33/54 (61.11%), Postives = 39/54 (72.22%), Query Frame = 1 
Query:    1 VGSRLALSLWACQQHNLVNEKIGKPTFQCTLPALDERWKTGKKSCWGGDGAGDS 162
            V SR A S+W C+QHNLVNEK+GKP F C L +LD RWKTG+  CWG  G  D+
Sbjct:  138 VESREAFSVWICKQHNLVNEKLGKPVFPCDLKSLDRRWKTGEPRCWGEKGGEDN 191
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13640.2934.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI47_ECTSI9.050e-2482.69Sulfhydryl oxidase n=2 Tax=Ectocarpus TaxID=2879 R... [more]
F0W2L6_9STRA5.050e-1867.35Sulfhydryl oxidase n=1 Tax=Albugo laibachii Nc14 T... [more]
A0A3M6VTY2_9STRA1.010e-1759.26Sulfhydryl oxidase n=2 Tax=Peronospora effusa TaxI... [more]
A0A024GDH3_9STRA2.010e-1769.57Sulfhydryl oxidase n=1 Tax=Albugo candida TaxID=65... [more]
A0A8K1CIJ9_PYTOL2.550e-1762.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
H3HAY4_PHYRM3.730e-1759.26Sulfhydryl oxidase n=2 Tax=Phytophthora TaxID=4783... [more]
D0N2Y7_PHYIT1.130e-1657.41Sulfhydryl oxidase n=10 Tax=Phytophthora TaxID=478... [more]
A0A5D6Y6J5_9STRA1.300e-1655.56Sulfhydryl oxidase n=1 Tax=Pythium brassicum TaxID... [more]
G4YVZ9_PHYSP2.250e-1657.41Sulfhydryl oxidase n=8 Tax=Phytophthora TaxID=4783... [more]
A0A4D9D9Q7_9STRA2.290e-1661.11Sulfhydryl oxidase n=1 Tax=Nannochloropsis salina ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13640contigH-canaliculatus_F_contig13640:2706..2870 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score95.9
Seed ortholog evalue6.3e-18
Seed eggNOG ortholog2880.D8LI47
Preferred nameGFER
KEGG koko:K17783
GOsGO:0000166,GO:0001889,GO:0001910,GO:0001911,GO:0002237,GO:0002682,GO:0002683,GO:0002697,GO:0002698,GO:0002703,GO:0002704,GO:0002706,GO:0002707,GO:0002715,GO:0002716,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0006950,GO:0007275,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009611,GO:0009617,GO:0009636,GO:0009719,GO:0009888,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010033,GO:0010243,GO:0010556,GO:0010557,GO:0010604,GO:0010941,GO:0015035,GO:0015036,GO:0016491,GO:0016667,GO:0016670,GO:0016971,GO:0016972,GO:0019219,GO:0019222,GO:0031099,GO:0031100,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031341,GO:0031342,GO:0031347,GO:0031348,GO:0032496,GO:0032501,GO:0032502,GO:0033993,GO:0034097,GO:0034612,GO:0036094,GO:0040007,GO:0042060,GO:0042221,GO:0042246,GO:0042269,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0045088,GO:0045824,GO:0045935,GO:0045953,GO:0046677,GO:0048037,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048589,GO:0048731,GO:0048732,GO:0048856,GO:0050660,GO:0050662,GO:0050776,GO:0050777,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051173,GO:0051704,GO:0051707,GO:0051716,GO:0055114,GO:0060255,GO:0060548,GO:0061008,GO:0065007,GO:0070887,GO:0071216,GO:0071219,GO:0071222,GO:0071236,GO:0071310,GO:0071345,GO:0071356,GO:0071396,GO:0071417,GO:0071495,GO:0072716,GO:0072717,GO:0080090,GO:0080134,GO:0080135,GO:0097159,GO:0097237,GO:0097421,GO:1900407,GO:1900408,GO:1901214,GO:1901215,GO:1901265,GO:1901363,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902882,GO:1902883,GO:1903201,GO:1903202,GO:1903203,GO:1903204,GO:2000112,GO:2000278,GO:2000573
EggNOG free text desc.sulfhydryl oxidase
EggNOG OGsCOG5054@1,KOG3355@2759
EC1.8.3.2
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03029
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Model size165
Cds size165
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929106.1021502-CDS-H-canaliculatus_F_contig13640:2705..28701622929106.1021502-CDS-H-canaliculatus_F_contig13640:2705..2870Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13640 2706..2870 -
1696845681.2176013-CDS-H-canaliculatus_F_contig13640:2705..28701696845681.2176013-CDS-H-canaliculatus_F_contig13640:2705..2870Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13640 2706..2870 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13640.2934.1prot_H-canaliculatus_F_contig13640.2934.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig13640 2706..2870 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig13640.2934.1

>prot_H-canaliculatus_F_contig13640.2934.1 ID=prot_H-canaliculatus_F_contig13640.2934.1|Name=mRNA_H-canaliculatus_F_contig13640.2934.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=55bp
VGSRLALSLWACQQHNLVNEKIGKPTFQCTLPALDERWKTGKKSCWGGDG
AGDS*
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mRNA from alignment at H-canaliculatus_F_contig13640:2706..2870-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig13640.2934.1 ID=mRNA_H-canaliculatus_F_contig13640.2934.1|Name=mRNA_H-canaliculatus_F_contig13640.2934.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=165bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13640:2706..2870- (Hapterophycus canaliculatus Oshoro5f female)
GTGGGGTCACGCCTGGCGCTGTCCTTGTGGGCCTGCCAGCAGCACAACTT
GGTGAATGAAAAGATAGGGAAGCCGACCTTCCAGTGCACTTTGCCAGCCC
TCGACGAGCGATGGAAAACGGGCAAGAAGTCGTGTTGGGGGGGAGACGGC
GCTGGTGATAGTTGA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13640:2706..2870-

>mRNA_H-canaliculatus_F_contig13640.2934.1 ID=mRNA_H-canaliculatus_F_contig13640.2934.1|Name=mRNA_H-canaliculatus_F_contig13640.2934.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=330bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13640:2706..2870- (Hapterophycus canaliculatus Oshoro5f female)
GTGGGGTCACGCCTGGCGCTGTCCTTGTGGGCCTGCCAGCAGCACAACTT
GGTGAATGAAAAGATAGGGAAGCCGACCTTCCAGTGCACTTTGCCAGCCC
TCGACGAGCGATGGAAAACGGGCAAGAAGTCGTGTTGGGGGGGAGACGGC
GCTGGTGATAGTTGAGTGGGGTCACGCCTGGCGCTGTCCTTGTGGGCCTG
CCAGCAGCACAACTTGGTGAATGAAAAGATAGGGAAGCCGACCTTCCAGT
GCACTTTGCCAGCCCTCGACGAGCGATGGAAAACGGGCAAGAAGTCGTGT
TGGGGGGGAGACGGCGCTGGTGATAGTTGA
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