mRNA_H-canaliculatus_F_contig13491.2828.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig13491.2828.1
Unique NamemRNA_H-canaliculatus_F_contig13491.2828.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig13491.2828.1 vs. uniprot
Match: A0A6H5K8A8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8A8_9PHAE)

HSP 1 Score: 406 bits (1043), Expect = 1.560e-140
Identity = 196/216 (90.74%), Postives = 208/216 (96.30%), Query Frame = 1
Query:    1 QAYYNEKEARDLCRILLDAVRYCHDLGIVHRDLKPENLLLTSQHDDANIKLADFGFARSVMSGFVSTQCGTPGYVAPEILRAEPYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIKSGNFKFHPEYWQSVSNEAKDLIRRLLTVDPKKRMTAAQAVTHPWLLSRDSDLLNRNLGVNLEQLKLFNARRKLRAAIKSVLATRMMAYKFHIEKL 648
            +A+YNEKEARDLCRILLDAVRYCHDLGIVHRDLKPENLLLTSQHDDAN+KLADFGFARS+M GFVSTQCGTPGYVAPEILRAE YGTSVDMWSIGVI+YILLGGYPPFHDENQTRLFRKIK+GNFKFHPEYWQS S+EAKDLIRRLLTVDPKKR+TAAQAVTHPWLLS+D DLL  NLGVNLEQL+LFNARRKLRAAIKSVLAT+MMA KF+IE L
Sbjct:  151 KAFYNEKEARDLCRILLDAVRYCHDLGIVHRDLKPENLLLTSQHDDANVKLADFGFARSIMGGFVSTQCGTPGYVAPEILRAESYGTSVDMWSIGVIVYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWQSTSSEAKDLIRRLLTVDPKKRLTAAQAVTHPWLLSKDDDLLKHNLGVNLEQLRLFNARRKLRAAIKSVLATQMMAGKFNIEAL 366          
BLAST of mRNA_H-canaliculatus_F_contig13491.2828.1 vs. uniprot
Match: A0A6H5KCN7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN7_9PHAE)

HSP 1 Score: 331 bits (849), Expect = 5.320e-113
Identity = 156/214 (72.90%), Postives = 183/214 (85.51%), Query Frame = 1
Query:    1 QAYYNEKEARDLCRILLDAVRYCHDLGIVHRDLKPENLLLTSQHDDANIKLADFGFARSVMSGFVSTQCGTPGYVAPEILRAEPYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIKSGNFKFHPEYWQSVSNEAKDLIRRLLTVDPKKRMTAAQAVTHPWLLSRDSDLLNRNLGVNLEQLKLFNARRKLRAAIKSVLATRMMAYKFHIE 642
            + YYNE+EARDLCR+LLD+V+YCH+LGIVHRDLKPENLLLTS+HDDA IKLADFGFA SV++G VS QCG+PGYVAPEILRA PYGTSVDMWS+GVIIY LLGGYPPFHDENQTRLFR+IK+G+FKFH EYW + S EAKDLIR+LL VDP KRMTA QA  HPWLL+    L + NLG NL+QL++FNA RKLR AI+SV+A + +   F ++
Sbjct:   18 KTYYNEEEARDLCRVLLDSVKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIRKLLLVDPAKRMTATQAAEHPWLLTTGESLASHNLGKNLDQLRIFNATRKLRGAIQSVIAAKKLGKSFGLQ 231          
BLAST of mRNA_H-canaliculatus_F_contig13491.2828.1 vs. uniprot
Match: A0A835YZ60_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ60_9STRA)

HSP 1 Score: 332 bits (850), Expect = 1.750e-111
Identity = 159/207 (76.81%), Postives = 180/207 (86.96%), Query Frame = 1
Query:    7 YYNEKEARDLCRILLDAVRYCHDLGIVHRDLKPENLLLTSQHDDANIKLADFGFARSVMSGFVSTQCGTPGYVAPEILRAEPYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIKSGNFKFHPEYWQSVSNEAKDLIRRLLTVDPKKRMTAAQAVTHPWLLSRDSDLLNRNLGVNLEQLKLFNARRKLRAAIKSVLATRMMAY 627
            +Y EKEARDLC+ILLDA++YCHD  IVHRDLKPENLLLTS  DDA+IKLADFGFA+++    V+TQCGTP YVAPEILR  PYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKI++G F+FH EYW S+S++AKDLI RLLTVD   R+TA +AV+HPWLL+ D+DL  RNLG NLEQLKLFNARRKLRAAIKSVL  R MA+
Sbjct:  135 FYTEKEARDLCKILLDAIKYCHDRDIVHRDLKPENLLLTSNDDDASIKLADFGFAKALNGSMVTTQCGTPAYVAPEILRHRPYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIRAGKFEFHNEYWGSISSDAKDLISRLLTVDQHSRLTAREAVSHPWLLTSDTDLAARNLGKNLEQLKLFNARRKLRAAIKSVLVARRMAH 341          
BLAST of mRNA_H-canaliculatus_F_contig13491.2828.1 vs. uniprot
Match: D8LK21_ECTSI (Possible Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK21_ECTSI)

HSP 1 Score: 333 bits (853), Expect = 2.580e-111
Identity = 157/214 (73.36%), Postives = 184/214 (85.98%), Query Frame = 1
Query:    1 QAYYNEKEARDLCRILLDAVRYCHDLGIVHRDLKPENLLLTSQHDDANIKLADFGFARSVMSGFVSTQCGTPGYVAPEILRAEPYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIKSGNFKFHPEYWQSVSNEAKDLIRRLLTVDPKKRMTAAQAVTHPWLLSRDSDLLNRNLGVNLEQLKLFNARRKLRAAIKSVLATRMMAYKFHIE 642
            ++YYNE+EARDLCR+LLD+VRYCH+LGIVHRDLKPENLLLTS+HDDA IKLADFGFA SV++G VS QCG+PGYVAPEILRA PYGTSVDMWS+GVIIY LLGGYPPFHDENQTRLFR+IK+G+FKFH EYW + S EAKDLIR+LL VDP KRMTA QA  HPWLL+  + L   NLG NL+QL++FNA RKLR AI+SV+A + +   F ++
Sbjct:  175 KSYYNEEEARDLCRVLLDSVRYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIRKLLLVDPAKRMTATQAAEHPWLLTTGASLAGHNLGKNLDQLRIFNATRKLRGAIQSVIAAKKLGKSFGLQ 388          
BLAST of mRNA_H-canaliculatus_F_contig13491.2828.1 vs. uniprot
Match: D8LP07_ECTSI (Possible CDPK n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP07_ECTSI)

HSP 1 Score: 290 bits (742), Expect = 7.000e-98
Identity = 141/156 (90.38%), Postives = 149/156 (95.51%), Query Frame = 1
Query:  181 MSGFVSTQCGTPGYVAPEILRAEPYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIKSGNFKFHPEYWQSVSNEAKDLIRRLLTVDPKKRMTAAQAVTHPWLLSRDSDLLNRNLGVNLEQLKLFNARRKLRAAIKSVLATRMMAYKFHIEKL 648
            M GFVSTQCGTPGYVAPEILRAE YGTSVDMWSIGVI+YILLGGYPPFHDENQTRLFRKIK+GNFKFHPEYWQS+SNEAKDLIRRLLTVDPKKR+TAAQAVTHPWLLS+D+DLL  NLGVNLEQL+LFNARRKLRAAIKSVLAT+MMA KF IE L
Sbjct:    1 MGGFVSTQCGTPGYVAPEILRAESYGTSVDMWSIGVIVYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWQSISNEAKDLIRRLLTVDPKKRLTAAQAVTHPWLLSKDADLLKHNLGVNLEQLRLFNARRKLRAAIKSVLATQMMAGKFGIEAL 156          
BLAST of mRNA_H-canaliculatus_F_contig13491.2828.1 vs. uniprot
Match: A0A7S2XV40_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV40_9STRA)

HSP 1 Score: 293 bits (751), Expect = 3.040e-96
Identity = 140/208 (67.31%), Postives = 165/208 (79.33%), Query Frame = 1
Query:    1 QAYYNEKEARDLCRILLDAVRYCHDLGIVHRDLKPENLLLTSQHDDANIKLADFGFARSVM-SGFVSTQCGTPGYVAPEILRAEPYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIKSGNFKFHPEYWQSVSNEAKDLIRRLLTVDPKKRMTAAQAVTHPWLLSRDSDLLNRNLGVNLEQLKLFNARRKLRAAIKSVLATRMM 621
            + YYNEKEARDL  ILL A+++CHD GIVHRDLKPENLLLTS  DDA+IK+ADFGFAR V  S  ++TQCGTPGYVAPEIL   PYG +VDMWSIGVI YILLGGYPPFHDE Q+ LF KI++G+F FHPEYW  VS EAKDLIR+LLTVDP KR+TAA+A+ HPW+   D  L  RNL   L +L+ FNARRK R+ +K+++A   M
Sbjct:  119 KTYYNEKEARDLVHILLSAIKFCHDNGIVHRDLKPENLLLTSSKDDASIKIADFGFARQVKESNNLTTQCGTPGYVAPEILNGVPYGLAVDMWSIGVITYILLGGYPPFHDEKQSNLFAKIRAGDFVFHPEYWDPVSEEAKDLIRKLLTVDPNKRITAAEAMQHPWVTGADETLAARNLDSQLRELRRFNARRKFRSGVKAIVAANRM 326          
BLAST of mRNA_H-canaliculatus_F_contig13491.2828.1 vs. uniprot
Match: D8LEF0_ECTSI (Myosin light chain kinase (MLCK) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF0_ECTSI)

HSP 1 Score: 299 bits (766), Expect = 1.230e-94
Identity = 139/206 (67.48%), Postives = 173/206 (83.98%), Query Frame = 1
Query:    7 YYNEKEARDLCRILLDAVRYCHDLGIVHRDLKPENLLLTSQHDDANIKLADFGFARSVMSGFVSTQCGTPGYVAPEILRAEPYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIKSGNFKFHPEYWQSVSNEAKDLIRRLLTVDPKKRMTAAQAVTHPWLLSRDSDLLNRNLGVNLEQLKLFNARRKLRAAIKSVLATRMMA 624
            YYNE EARD+C   L+A++Y H  G+VHRDLKPENLLL S+ DD++I+LADFGFA SV+ G+V+ QCGTPGYVAPEILR+ PYGTSVDMWSIGVIIYI+L GYPPFHDE+Q RL+RKIK+G+++F PEYW  VS+EAKDLIR+LLTVDP +R+TAA+A  HPWL +   +L   +LG  LE+LK+FNA RKLRAAI+SVL ++ +A
Sbjct:  473 YYNEAEARDVCLTFLEAMKYTHGQGVVHRDLKPENLLLASKSDDSSIRLADFGFAVSVLDGYVTDQCGTPGYVAPEILRSRPYGTSVDMWSIGVIIYIILAGYPPFHDEDQNRLYRKIKAGHYRFDPEYWNDVSSEAKDLIRKLLTVDPTRRLTAAEACEHPWLSTARGNLTQHDLGAGLEKLKIFNATRKLRAAIRSVLLSKKIA 678          
BLAST of mRNA_H-canaliculatus_F_contig13491.2828.1 vs. uniprot
Match: A0A6H5K8I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I6_9PHAE)

HSP 1 Score: 290 bits (741), Expect = 7.510e-91
Identity = 135/205 (65.85%), Postives = 169/205 (82.44%), Query Frame = 1
Query:    7 YYNEKEARDLCRILLDAVRYCHDLGIVHRDLKPENLLLTSQHDDANIKLADFGFARSVMSGFVSTQCGTPGYVAPEILRAEPYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIKSGNFKFHPEYWQSVSNEAKDLIRRLLTVDPKKRMTAAQAVTHPWLLSRDSDLLNRNLGVNLEQLKLFNARRKLRAAIKSVLATRMM 621
            YYNE EARD+C  +L+A++Y H  G+VHRDLKPENLLL S+ DD++I+LADFGFA SV+ G+V+ QCGTPGYVAPEILR  PYGTSVDMWSIGVIIYI+L GYPPF DE+Q RL+RKIK+G+++F PEYW  VS+EAKDLIR+LL VDP +R+TAA+A  HPWL +   +L   +LG  LE+LK+FNA RKLRAAI++V  + M+
Sbjct:  468 YYNEAEARDVCLTILEAIKYIHGQGVVHRDLKPENLLLASKSDDSSIRLADFGFAVSVLDGYVTDQCGTPGYVAPEILRGHPYGTSVDMWSIGVIIYIILAGYPPFCDEDQHRLYRKIKAGHYRFEPEYWNDVSSEAKDLIRKLLIVDPTRRLTAAEACEHPWLSTARGNLTKHDLGAGLEKLKIFNATRKLRAAIRTVRGSVML 672          
BLAST of mRNA_H-canaliculatus_F_contig13491.2828.1 vs. uniprot
Match: A0A6V1U2B4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U2B4_HETAK)

HSP 1 Score: 278 bits (712), Expect = 1.020e-90
Identity = 131/208 (62.98%), Postives = 163/208 (78.37%), Query Frame = 1
Query:    1 QAYYNEKEARDLCRILLDAVRYCHDLGIVHRDLKPENLLLTSQHDDANIKLADFGFARSVMSGFVSTQCGTPGYVAPEILRAEPYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIKSGNFKFHPEYWQSVSNEAKDLIRRLLTVDPKKRMTAAQAVTHPWLLSRDSDLLNRNLGVNLEQLKLFNARRKLRAAIKSVLATRMMA 624
            + +YNEKEARDL +ILL AV+YCHD  IVHRDLKPENLLL+S  DDA+IK+ADFGFAR +    ++TQCGTPGYVAPEIL   PYG SVDMWS GVI YILLGGYPPFHDE Q+ LF KI+SG+++FHPEYWQ+VS +A+DLI+++LTVD  +R+TA  A  HPW+ +    L  R L  NL +L+ FNARRK R+ +K+++A   MA
Sbjct:  121 KTFYNEKEARDLVKILLSAVKYCHDNDIVHRDLKPENLLLSSAEDDASIKIADFGFARLLRGNTLTTQCGTPGYVAPEILNGVPYGKSVDMWSCGVITYILLGGYPPFHDEKQSNLFAKIRSGSYEFHPEYWQNVSKDAQDLIKKMLTVDIAQRITAEAACNHPWVQADADVLAKRGLDGNLTELRRFNARRKFRSGVKAIVAANRMA 328          
BLAST of mRNA_H-canaliculatus_F_contig13491.2828.1 vs. uniprot
Match: A0A7S0SZL7_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SZL7_9STRA)

HSP 1 Score: 274 bits (701), Expect = 5.590e-90
Identity = 126/204 (61.76%), Postives = 161/204 (78.92%), Query Frame = 1
Query:   10 YNEKEARDLCRILLDAVRYCHDLGIVHRDLKPENLLLTSQHDDANIKLADFGFARSVMSGFVSTQCGTPGYVAPEILRAEPYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIKSGNFKFHPEYWQSVSNEAKDLIRRLLTVDPKKRMTAAQAVTHPWLLSRDSDLLNRNLGVNLEQLKLFNARRKLRAAIKSVLATRMM 621
            YNEKEARD+ +IL+ A++YCHD  +VHRDLKPENLLLTS+ DDA++K+ADFGFA  V S  +STQCGTPGY+APEIL  +PYG +VDMWSIGVI YI+LGGYPPFHD+N   LFRKI+ G+F+FHPEYW +VS++AK+LI+ LLTV+   R+TA Q + HPWL++ D+ L   NL  NL + K FNA R+ + A K+V+A   M
Sbjct:   42 YNEKEARDVVKILVSAIKYCHDRDVVHRDLKPENLLLTSREDDASLKIADFGFAVRVNSNLLSTQCGTPGYIAPEILENKPYGKAVDMWSIGVITYIILGGYPPFHDDNMRNLFRKIRKGDFEFHPEYWNNVSSDAKNLIKGLLTVNASARLTADQVLQHPWLMTDDATLAAINLDSNLAEFKKFNAARRFKGAAKAVMAVNRM 245          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13491.2828.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K8A8_9PHAE1.560e-14090.74Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5KCN7_9PHAE5.320e-11372.90Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A835YZ60_9STRA1.750e-11176.81Kinase-like domain-containing protein n=1 Tax=Trib... [more]
D8LK21_ECTSI2.580e-11173.36Possible Ca2+/calmodulin-dependent protein kinase,... [more]
D8LP07_ECTSI7.000e-9890.38Possible CDPK n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A7S2XV40_9STRA3.040e-9667.31Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D8LEF0_ECTSI1.230e-9467.48Myosin light chain kinase (MLCK) n=1 Tax=Ectocarpu... [more]
A0A6H5K8I6_9PHAE7.510e-9165.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6V1U2B4_HETAK1.020e-9062.98Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S0SZL7_9STRA5.590e-9061.76Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13491contigH-canaliculatus_F_contig13491:244..2838 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score278.1
Seed ortholog evalue3.5e-72
Seed eggNOG ortholog2880.D8LE50
KEGG koko:K04373,ko:K04445
KEGG Pathwayko04010,ko04114,ko04150,ko04261,ko04668,ko04713,ko04714,ko04720,ko04722,ko04914,ko04931,ko05200,ko05206,ko05219,map04010,map04114,map04150,map04261,map04668,map04713,map04714,map04720,map04722,map04914,map04931,map05200,map05206,map05219
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0603@1,KOG0603@2759
EC2.7.11.1
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko03019
Hectar predicted targeting categoryother localisation
Exons4
Model size651
Cds size651
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13491.2828.1prot_H-canaliculatus_F_contig13491.2828.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig13491 244..2838 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929089.7315247-CDS-H-canaliculatus_F_contig13491:243..5041622929089.7315247-CDS-H-canaliculatus_F_contig13491:243..504Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13491 244..504 +
1696845675.4481752-CDS-H-canaliculatus_F_contig13491:243..5041696845675.4481752-CDS-H-canaliculatus_F_contig13491:243..504Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13491 244..504 +
1622929089.7474613-CDS-H-canaliculatus_F_contig13491:1316..14751622929089.7474613-CDS-H-canaliculatus_F_contig13491:1316..1475Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13491 1317..1475 +
1696845675.4622793-CDS-H-canaliculatus_F_contig13491:1316..14751696845675.4622793-CDS-H-canaliculatus_F_contig13491:1316..1475Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13491 1317..1475 +
1622929089.762068-CDS-H-canaliculatus_F_contig13491:2416..25961622929089.762068-CDS-H-canaliculatus_F_contig13491:2416..2596Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13491 2417..2596 +
1696845675.4739566-CDS-H-canaliculatus_F_contig13491:2416..25961696845675.4739566-CDS-H-canaliculatus_F_contig13491:2416..2596Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13491 2417..2596 +
1622929089.773488-CDS-H-canaliculatus_F_contig13491:2787..28381622929089.773488-CDS-H-canaliculatus_F_contig13491:2787..2838Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13491 2788..2838 +
1696845675.4846911-CDS-H-canaliculatus_F_contig13491:2787..28381696845675.4846911-CDS-H-canaliculatus_F_contig13491:2787..2838Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13491 2788..2838 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig13491.2828.1

>prot_H-canaliculatus_F_contig13491.2828.1 ID=prot_H-canaliculatus_F_contig13491.2828.1|Name=mRNA_H-canaliculatus_F_contig13491.2828.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=217bp
QAYYNEKEARDLCRILLDAVRYCHDLGIVHRDLKPENLLLTSQHDDANIK
LADFGFARSVMSGFVSTQCGTPGYVAPEILRAEPYGTSVDMWSIGVIIYI
LLGGYPPFHDENQTRLFRKIKSGNFKFHPEYWQSVSNEAKDLIRRLLTVD
PKKRMTAAQAVTHPWLLSRDSDLLNRNLGVNLEQLKLFNARRKLRAAIKS
VLATRMMAYKFHIEKL*
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mRNA from alignment at H-canaliculatus_F_contig13491:244..2838+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig13491.2828.1 ID=mRNA_H-canaliculatus_F_contig13491.2828.1|Name=mRNA_H-canaliculatus_F_contig13491.2828.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2595bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13491:244..2838+ (Hapterophycus canaliculatus Oshoro5f female)
CAGGCGTACTACAACGAGAAGGAGGCGCGCGACCTGTGCCGCATCCTGCT GGACGCCGTGCGGTACTGCCACGACCTCGGCATCGTGCACCGCGACTTGA AGCCGGAGAACCTGCTGCTGACGTCTCAGCACGACGACGCCAACATCAAG CTCGCGGACTTCGGCTTTGCGCGCAGCGTCATGAGCGGCTTCGTGTCGAC GCAGTGCGGAACCCCGGGCTACGTCGCGCCGGAGATCCTCAGAGCCGAGC CGTACGGAACGGTCAGTTTGGGCTCCTGTGTCGTCGTCTATGCCTTGCTT AGGCTAATTTTTGTTTGTTGTACGCTTCGGAGTGTCGTCGGTTTAGACGT CCTCGTCATCTTCCGCGTTTGCGTGTGCTTCGTCATCGCCGGACCGCCGG ACCCATTGCTGGCCCCGCTCGGGTGTGGTGTGTTGTTGCGTTGTGCACAG CTTTCTTGCCCTTCGTGGTCGTGCTTGCTGTTTTCCGACAGCTCAGGGGC CGCGGCGATGGTTGCGGGGGAGAGTTAAGACCCCTTTCCCACGTCGTGCG GAGAATGGCAGGCTCTTGCGGCACCGCTGTCTTCGTCAGCGCGACAAGAC GCTAAGCCTGCTGCTCTCCGCGGCAAAAGGGGGCACCAGAGATGCGACAC GCCGTTGGCGGCAGCGCCAGCAGCAGCAGCAGCAGCAGCAGCAGCGCCAC CGTGCATGGAAGAACAAGTCGCGCGACCCTTTCGCCGCTGCCGTCAGCCG TGCCGCCAGAAATTGGCGCTCGCGCTCGCGCGTTCGTACATTCGCCCCCC CCCCCCCCAGGGGTGATCTAGTCTCTCGCGTTGCCCTGAAACCGCTCTCC GCCCCTCCTGTCCAATCTCCCTGCAGCCGCTTTCACAGTGGTCCTCCCTT CCTCTCGTTTCGTTTATCTTGTTCGTCCTGCTGATTGGTATTTTCCTGCA TTCCTTCCTTTCCTTCCTTTCCTTCCTTCTTCGCTCCCTCCCTCCCTCCG CCCCTTCCTCACGACCGCCGCCCCCGCGCGGTTGTTGCTCGCCCGCCCTT CCTTCCGCTCCCCGTGCGCGCAGTCGGTCGACATGTGGAGCATCGGCGTC ATTATCTACATCCTCCTCGGGGGTTACCCACCCTTCCACGACGAGAACCA GACGAGGCTCTTCCGGAAGATCAAGTCGGGCAACTTCAAGTTCCACCCCG AGTACTGGCAATCCGTGTCCAACGAGGCCAAGGTGAGTAGGTTCGTGCGA CGCGAGCGAGGTTCGGCGTCGGTGCTCTAGTGGTGGATCTTCTGCTGTCA GTCCGCCGGTCTTTGTCAAAATTTATTGATTGCTCGGCAAAGTCGCGGCG GGTCTGTATTCGGCGGAGGGACGGCGGGTGTTTTCGTGTGGAGCATGGCA AATGTGTTTGCTTTGTTCCTATCCCCCAACCACCCCACCCCACCCCACCG GTAGTGCGAGGGAGAGGAGACCAGCAAGAGGTTTATGTATCAGGTACGGC CGACGCGTTAAGAAGGCTCGGCTGTTGGCGGTGTCTTTGTTGGAGTGTAG GGACGGTGCTTCGTCTTGACAGGGATGCGTGATCAAGAGCTGGGTGGCTA AGCAAGTGTGAGCGCCCCTCGAAGTCCATCAACATGCGAGAGTCCCGCAG TCTAAGGTGCAACGATCCAAAGGAGCTCCTACCTTCCTGCTGCCTCCGAC GCTGGCCCATCGTTGATTCACCCCCATCCCCACCGCCTGCATCGTCAACT TTGGCTTTTGACCGGTATCAATCGTGAAGACGCAAAGCGCGCCGATAATG AAAAAATACAACCAGCGACATCCAAAACTCCCTTCTCCCCCGATCGCCGG TGCTGCGGCTGCGGCCGCTGCTGCCACAGAAGGTTGCCATGAACCATGGG GTCTCGCGATGCGCGCACACCATCATCGCGGTGTAGCAAGCTAACGACGG TCGAATACGTCTTGTTTTAACGGCCATTGCCGTGCCCCCACCTGAGCCCC ATACCTGGCACACGAACAGCCTGCCTGAACAAATATCCCTCCCTTCGCCC TCCGTCCGCGCTCTATGCCCACCCCCCCAACCCGAACGGATGGACGGGCA AATGAAACACGCTGATCGTCGTCGTCGTCGTTTTCACCATCATCCACATC ATGGAACGGCAATGAGCGAGCAGGACCTGATCCGCCGGCTTCTGACGGTC GACCCGAAGAAGCGCATGACGGCCGCGCAGGCGGTGACGCACCCGTGGCT CCTCAGCAGGGACTCGGACCTGCTCAACCGCAACCTGGGGGTCAACCTGG AGCAGCTCAAGCTGTTCAACGCACGCCGCAAGCTGCGGGCGGCGATCAAG TCGGTAAGTAGACCGCGCGATTGGTGGACTGAAATGCTGTCGCGCGACCC TCCACCCCCACCCCGCGCCCGATTGTAGCCGCTGCTGACGCGATATGGTT TGCTGGGGCTTGTTATTTTGTGTCGCCGTAACGTTGCCGCCGCCGTCGCT GCCCCGAACCACGCCGGACGAAAACGAACTGCTGCTTCCTGCAGGTGTTG GCCACGAGGATGATGGCCTACAAGTTCCACATCGAGAAGCTTTAA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13491:244..2838+

>mRNA_H-canaliculatus_F_contig13491.2828.1 ID=mRNA_H-canaliculatus_F_contig13491.2828.1|Name=mRNA_H-canaliculatus_F_contig13491.2828.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1302bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13491:244..2838+ (Hapterophycus canaliculatus Oshoro5f female)
CAGGCGTACTACAACGAGAAGGAGGCGCGCGACCTGTGCCGCATCCTGCT
GGACGCCGTGCGGTACTGCCACGACCTCGGCATCGTGCACCGCGACTTGA
AGCCGGAGAACCTGCTGCTGACGTCTCAGCACGACGACGCCAACATCAAG
CTCGCGGACTTCGGCTTTGCGCGCAGCGTCATGAGCGGCTTCGTGTCGAC
GCAGTGCGGAACCCCGGGCTACGTCGCGCCGGAGATCCTCAGAGCCGAGC
CGTACGGAACGCAGGCGTACTACAACGAGAAGGAGGCGCGCGACCTGTGC
CGCATCCTGCTGGACGCCGTGCGGTACTGCCACGACCTCGGCATCGTGCA
CCGCGACTTGAAGCCGGAGAACCTGCTGCTGACGTCTCAGCACGACGACG
CCAACATCAAGCTCGCGGACTTCGGCTTTGCGCGCAGCGTCATGAGCGGC
TTCGTGTCGACGCAGTGCGGAACCCCGGGCTACGTCGCGCCGGAGATCCT
CAGAGCCGAGCCGTACGGAACGTCGGTCGACATGTGGAGCATCGGCGTCA
TTATCTACATCCTCCTCGGGGGTTACCCACCCTTCCACGACGAGAACCAG
ACGAGGCTCTTCCGGAAGATCAAGTCGGGCAACTTCAAGTTCCACCCCGA
GTACTGGCAATCCGTGTCCAACGAGGCCAAGTCGGTCGACATGTGGAGCA
TCGGCGTCATTATCTACATCCTCCTCGGGGGTTACCCACCCTTCCACGAC
GAGAACCAGACGAGGCTCTTCCGGAAGATCAAGTCGGGCAACTTCAAGTT
CCACCCCGAGTACTGGCAATCCGTGTCCAACGAGGCCAAGGACCTGATCC
GCCGGCTTCTGACGGTCGACCCGAAGAAGCGCATGACGGCCGCGCAGGCG
GTGACGCACCCGTGGCTCCTCAGCAGGGACTCGGACCTGCTCAACCGCAA
CCTGGGGGTCAACCTGGAGCAGCTCAAGCTGTTCAACGCACGCCGCAAGC
TGCGGGCGGCGATCAAGTCGGACCTGATCCGCCGGCTTCTGACGGTCGAC
CCGAAGAAGCGCATGACGGCCGCGCAGGCGGTGACGCACCCGTGGCTCCT
CAGCAGGGACTCGGACCTGCTCAACCGCAACCTGGGGGTCAACCTGGAGC
AGCTCAAGCTGTTCAACGCACGCCGCAAGCTGCGGGCGGCGATCAAGTCG
GTGTTGGCCACGAGGATGATGGCCTACAAGTTCCACATCGAGAAGCTTTA
AGTGTTGGCCACGAGGATGATGGCCTACAAGTTCCACATCGAGAAGCTTT
AA
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