mRNA_H-canaliculatus_F_contig13397.2761.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13397.2761.1 vs. uniprot
Match: A0A6H5K5G6_9PHAE (Deubiquitinating enzyme A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5G6_9PHAE) HSP 1 Score: 268 bits (686), Expect = 9.130e-79 Identity = 128/151 (84.77%), Postives = 139/151 (92.05%), Query Frame = 1
Query: 364 DAVFREAMRRKGLTVVDVEPDGNCLFRSVSHQIYGDADRHYSVRRACVEHMSKHEARFGVFVAENFRDYLYRIRQPGVWGDDLEIRALEELFDRPIEIYSSEGEHLRPMKIDFDASGLDVEISPIKLSYHGQSHYNSVRDRSLRYPLKARR 816
+ FREAMRR GL+VVDVEPDGNCLFRSVSHQIYGDADRHY VR+ACVEHM +H ARFGVFVAE+FRDYL+RIRQPGVWGDDLEIRALEE+FDRPIEIYSSE E L+PMKIDFDASGLD+ ++PIKLSYHGQSHYNSVRD SLRYPL RR
Sbjct: 1004 ERAFREAMRRTGLSVVDVEPDGNCLFRSVSHQIYGDADRHYPVRKACVEHMYRHRARFGVFVAEDFRDYLFRIRQPGVWGDDLEIRALEEMFDRPIEIYSSESEGLQPMKIDFDASGLDMGMAPIKLSYHGQSHYNSVRDFSLRYPLHPRR 1154
BLAST of mRNA_H-canaliculatus_F_contig13397.2761.1 vs. uniprot
Match: D8LLK1_ECTSI (Deubiquitinating enzyme A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLK1_ECTSI) HSP 1 Score: 217 bits (553), Expect = 7.370e-63 Identity = 103/119 (86.55%), Postives = 111/119 (93.28%), Query Frame = 1
Query: 361 ADAVFREAMRRKGLTVVDVEPDGNCLFRSVSHQIYGDADRHYSVRRACVEHMSKHEARFGVFVAENFRDYLYRIRQPGVWGDDLEIRALEELFDRPIEIYSSEGEHLRPMKIDFDASGL 717
AD FREAMRR GL+VVDVEPDGNCLFRSVSHQIYGDADRHY VR+ACVEHM +H ARFGVFVAE+FRDYL+RIRQPGVWGDDLEIRALEE+FDRPIEIYSSE E L+PMKIDFDASG+
Sbjct: 501 ADRAFREAMRRTGLSVVDVEPDGNCLFRSVSHQIYGDADRHYPVRKACVEHMYRHRARFGVFVAEDFRDYLFRIRQPGVWGDDLEIRALEEMFDRPIEIYSSESEGLQPMKIDFDASGI 619
BLAST of mRNA_H-canaliculatus_F_contig13397.2761.1 vs. uniprot
Match: A0A836CLU3_9STRA (OTU domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLU3_9STRA) HSP 1 Score: 176 bits (445), Expect = 3.340e-51 Identity = 85/145 (58.62%), Postives = 102/145 (70.34%), Query Frame = 1
Query: 415 VEPDGNCLFRSVSHQIYGDADRHYSVRRACVEHMSKHEARFGVFVAENFRDYLYRIRQPGVWGDDLEIRALEELFDRPIEIYSSEGEHLRPMKIDFDAS------------GLDVEISPIKLSYHGQSHYNSVRDRSLRYPLKAR 813
+EPDGNCL+R+VS QIYG+ D H VR+ACV+HMS H RFG FVA +F YL R RQPGVWGDDLEIRALEE+FDRP+ IY++E RPMK+DF+ + ++PI LSYHG SHYNSVRD L YPL+ R
Sbjct: 1 MEPDGNCLYRAVSDQIYGNCDNHLYVRKACVDHMSAHRTRFGTFVAGDFAAYLRRARQPGVWGDDLEIRALEEVFDRPVRIYAAEDPRARPMKMDFEHALEGGGEXXXXXXXXXRRVAPITLSYHGHSHYNSVRDARLVYPLQPR 145
BLAST of mRNA_H-canaliculatus_F_contig13397.2761.1 vs. uniprot
Match: A0A7S2D4I9_9STRA (Deubiquitinating enzyme A n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D4I9_9STRA) HSP 1 Score: 157 bits (396), Expect = 5.180e-40 Identity = 75/154 (48.70%), Postives = 101/154 (65.58%), Query Frame = 1
Query: 361 ADAVFREAMRRKGLTVVDVEPDGNCLFRSVSHQIYGDADRHYSVRRACVEHMSKHEARFGVFVAENFRDYLYRIRQPGVWGDDLEIRALEELFDRPIEIYSSEGEH---LRPMKIDFDASGLDVEISPIKLSYHGQSHYNSVRDRSLRYPLKAR 813
+++ F + +KG+ VV++E DGNCLFR+V HQIY D +RH +RR HM + RF +F +F Y+ RIR+ GVWGDDLEIRA+EEL DR IEIY +E + + P+K +FD +++PIKLSYHG SHYNSV D P+ R
Sbjct: 510 SESEFLRGLGKKGMQVVEMEADGNCLFRAVCHQIYDDPERHPELRRQVAAHMESNRERFSIFCTSDFGVYVERIRRNGVWGDDLEIRAMEELIDRSIEIYVAESKEDGTIEPLKTNFDEELTGADVTPIKLSYHGSSHYNSVVDEKTALPIVPR 663
BLAST of mRNA_H-canaliculatus_F_contig13397.2761.1 vs. uniprot
Match: A0A7S3HTQ3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTQ3_9STRA) HSP 1 Score: 148 bits (373), Expect = 1.370e-36 Identity = 72/147 (48.98%), Postives = 95/147 (64.63%), Query Frame = 1
Query: 364 DAVFREAMRRKGLTVVDVEPDGNCLFRSVSHQIYGDADRHYSVRRACVEHMSKHEARFGVFVAENFRDYLYRIRQPGVWGDDLEIRALEELFDRPIEIYSSEGEHLRPMKIDFDASGLDVEISPIKLSYHGQSHYNSVRDRSLRYPL 804
+ +F E + KGL V +E DGNCLFR++SHQ+Y + DRH +R CVEH+ +H RF VF NF ++L + + G W DDLEIRALEE+ DR I IYSS + P+ +F+ L + P+ LSYHG SHYNS+ D RYPL
Sbjct: 420 ERLFLEKLEEKGLHVFAIEGDGNCLFRAISHQLYLEQDRHDELRARCVEHLIRHRKRFEVFSDGNFDEHLQEMSKQGTWADDLEIRALEEITDRVITIYSSTADTYEPINNNFEEKNLLQGVPPLTLSYHGSSHYNSIYDE--RYPL 564
BLAST of mRNA_H-canaliculatus_F_contig13397.2761.1 vs. uniprot
Match: A0A2R5G0B2_9STRA (Deubiquitinating enzyme A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G0B2_9STRA) HSP 1 Score: 133 bits (335), Expect = 7.470e-32 Identity = 68/146 (46.58%), Postives = 101/146 (69.18%), Query Frame = 1
Query: 364 DAVFREAMRR-KGLTVVDVEPDGNCLFRSVSHQIYGDADRHYSVRRACVEHMSKHEARFGVFV-AENFRDYLYRIRQPGVWGDDLEIRALEELFDRPIEIYSSEG--EHLRPMKIDFDAS-GLDVEISP---IKLSYHGQSHYNSV 777
D VF + +++ + LTV VEPDGNCLFR+V+HQ+YGD++RH VR C +++ K+ RF + ++ F DY+ RQ VWGDD EIRA+EEL+DRP+EIY++ G + P+K+ F+ D ++ P I++S+HG +HYNSV
Sbjct: 392 DGVFLKNLQKDRELTVYSVEPDGNCLFRAVAHQVYGDSERHDIVRSDCCDYLEKNRERFAPLLGSDQFDDYVANKRQLKVWGDDPEIRAMEELYDRPVEIYAATGLGSNTEPLKLHFEGDLPSDSKMGPYLPIRISFHGNNHYNSV 537
BLAST of mRNA_H-canaliculatus_F_contig13397.2761.1 vs. uniprot
Match: A0A0M0JCE2_9EUKA (Deubiquitinating enzyme A n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JCE2_9EUKA) HSP 1 Score: 123 bits (309), Expect = 4.170e-30 Identity = 60/137 (43.80%), Postives = 88/137 (64.23%), Query Frame = 1
Query: 373 FREAMRRKGLTVVDVEPDGNCLFRSVSHQIYGDADRHYSVRRACVEHMSKHEARFGVFVAENFRDYLYRIRQPGVWGDDLEIRALEELFDRPIEIYSSEGEHLRPMKIDFDASGLDVEISPIKLSYHGQSHYNSVRD 783
F E +R +GL + + DGNCLFRSVS ++YGDA+ H VRR C++HM K F +V E+F YL R R+ V+G+ LEI+A+ E+++RP+ ++ G+ PM F A +P++LSYHG+SHYN + D
Sbjct: 48 FEERLRARGLHIRRMLDDGNCLFRSVSDRVYGDAEMHDVVRRLCLDHMEKERDHFSQYVTEDFDAYLRRKRRDRVFGNHLEIQAISEIYNRPVHVFDVRGDTEAPMNT-FTAPSEGEAGAPLRLSYHGRSHYNVIVD 183
BLAST of mRNA_H-canaliculatus_F_contig13397.2761.1 vs. uniprot
Match: A0A7S1G634_9STRA (Deubiquitinating enzyme A (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G634_9STRA) HSP 1 Score: 127 bits (319), Expect = 4.730e-30 Identity = 69/157 (43.95%), Postives = 94/157 (59.87%), Query Frame = 1
Query: 364 DAVFREAMRRKGLTVVDVEPDGNCLFRSVSHQIYGDADRHYSVRRACVEHMSKHEARFGVFVAENFRDYLYRIRQPGVWGDDLEIRALEELFDRPIEIYSSEG----EHLRPMKIDFDAS---GLDVEISPIKLSYHGQSHYNSVRDRSLRYPLKAR 813
+ FR AM GL + D+E DGNCLFR+V+HQ+Y D R+ +VR+A E+M + + F VA +F YL R+R WG E ALEE++DRP+EIYS E L P+K+ FD G +++P++LSYHG SH+NSV PL R
Sbjct: 315 EEAFRVAMASAGLPITDMEADGNCLFRAVAHQVYADPSRYDAVRQAVCEYMEANRSMFEQAVAGDFDVYLSRMRLDKEWGGHPEQLALEEMYDRPMEIYSRESWGKTNSLEPLKLHFDGELPMGELADVTPLRLSYHGGSHFNSVTGPGEAPPLGTR 471
BLAST of mRNA_H-canaliculatus_F_contig13397.2761.1 vs. uniprot
Match: A0A6B2L958_9EUKA (Deubiquitinating enzyme A n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L958_9EUKA) HSP 1 Score: 121 bits (303), Expect = 2.750e-29 Identity = 58/133 (43.61%), Postives = 87/133 (65.41%), Query Frame = 1
Query: 385 MRRKGLTVVDVEPDGNCLFRSVSHQIYGDADRHYSVRRACVEHMSKHEARFGVFVAENFRDYLYRIRQPGVWGDDLEIRALEELFDRPIEIYSSEGEHLRPMKIDFDASGLDVEISPIKLSYHGQSHYNSVRD 783
+ RKGL + E DGNCLFR+V+HQ+YGD + H VR+ C+++M K F FV E+F +Y+ R RQ V+G+ LE++A+ EL++RPI IY++ E L + ++ + P++LSYH +HYNSV D
Sbjct: 18 LERKGLKITKTEEDGNCLFRAVAHQVYGDEEMHDVVRKNCMDYMDKERNHFSQFVVEDFTEYIKRKRQDTVYGNHLELQAIAELYNRPILIYTTSEEPLNLFQDEYQ-----TDNPPMRLSYHYGNHYNSVWD 145
BLAST of mRNA_H-canaliculatus_F_contig13397.2761.1 vs. uniprot
Match: A0A078AW85_STYLE (Deubiquitinating enzyme A n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078AW85_STYLE) HSP 1 Score: 126 bits (316), Expect = 3.450e-29 Identity = 61/141 (43.26%), Postives = 92/141 (65.25%), Query Frame = 1
Query: 373 FREAMRRKGLTVVDVEPDGNCLFRSVSHQIY-GDADRHYSVRRACVEHMSKHEARFGVFV---AENFRDYLYRIRQPGVWGDDLEIRALEELFDRPIEIYSSEGEHLRPMKIDFDASGLDVEISPIKLSYHGQSHYNSVRD 783
FR + K L ++++E DGNCLFR++S QIY GD H +R+AC++++ + F F+ A+ F Y+++ RQ GVWGDD+E++A+ E+++RPIEIY+ E LR D D I P++LSYHG HYNS+R+
Sbjct: 272 FRRILAMKNLKIIEMEGDGNCLFRAISDQIYDGDQSHHMLIRQACMDYIQLEKEFFVQFIIGGAQTFDYYIHKKRQDGVWGDDIELQAMSEIYNRPIEIYAYRSEPLRTFHED---QHRDKGIKPMRLSYHGSEHYNSIRE 409 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13397.2761.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13397.2761.1 >prot_H-canaliculatus_F_contig13397.2761.1 ID=prot_H-canaliculatus_F_contig13397.2761.1|Name=mRNA_H-canaliculatus_F_contig13397.2761.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=273bp SRRNSDRLPSSHPRKAPASSSSARRRRSGNVGSSRRSSSSSQSRSRSRSTback to top mRNA from alignment at H-canaliculatus_F_contig13397:706..2973- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13397.2761.1 ID=mRNA_H-canaliculatus_F_contig13397.2761.1|Name=mRNA_H-canaliculatus_F_contig13397.2761.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2268bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13397:706..2973- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13397:706..2973- >mRNA_H-canaliculatus_F_contig13397.2761.1 ID=mRNA_H-canaliculatus_F_contig13397.2761.1|Name=mRNA_H-canaliculatus_F_contig13397.2761.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1638bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13397:706..2973- (Hapterophycus canaliculatus Oshoro5f female)back to top |