mRNA_H-canaliculatus_F_contig132.2630.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig132.2630.1
Unique NamemRNA_H-canaliculatus_F_contig132.2630.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig132.2630.1 vs. uniprot
Match: D7G2J2_ECTSI (PPIase cyclophilin-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2J2_ECTSI)

HSP 1 Score: 371 bits (953), Expect = 1.040e-122
Identity = 198/272 (72.79%), Postives = 217/272 (79.78%), Query Frame = 2 
Query:  476 MFRRKSNKAETKKKRSWEIDAEADDNDDSHEATAAPSEAFLQLAKDLEEKEKIQRENEERLRNQDALAAEAANKLRKKEELRKANAKNPRVFLDIEIADASGAKSRLTKGKKVGRITFELYENVVPKTAENFRSLCTGEKPRGASGFPLSFLGNIFHRIV--PDFMAQGGDITREDGSGGESIYGPTFADESFALKHDQPGLLSMANSGRNSNNSQFFITFGPLPWLDSKHVVFGKVVEGMEVVRKIEDCGTTSGEPTKRVQIAECGQVPDE 1285
            MFRRK NK E KKKR+WE+D EADD D+  + T  PSEAFL L ++LEEKEKIQ+EN ER +NQDALAAEAAN LR+KEE+RKAN KNPRVFLDIEIAD +GAKSRL KGK  GR+T EL+EN VP+TAENFR+LCTGEK  G      ++ G      V  PD              GGESIYGPTF DESF LKHDQPGLLSMANSGR+SNNSQFFITFGPLPWLDSKHVVFGKVVEGMEVVRKIEDCGTTSGEPTKRVQIAECGQ+PDE
Sbjct:    1 MFRRKPNKPEAKKKRAWEVDVEADDKDEGDDTT--PSEAFLSLQRELEEKEKIQQENAERAKNQDALAAEAANSLRRKEEVRKANTKNPRVFLDIEIADTTGAKSRLAKGKNAGRVTLELFENAVPRTAENFRALCTGEKV-GRERESDTWCGATSRTEVKPPDLNLTAYPPCPRCSCGGESIYGPTFVDESFQLKHDQPGLLSMANSGRDSNNSQFFITFGPLPWLDSKHVVFGKVVEGMEVVRKIEDCGTTSGEPTKRVQIAECGQIPDE 269
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BLAST of mRNA_H-canaliculatus_F_contig132.2630.1 vs. uniprot
Match: A0A146LV45_LYGHE (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A146LV45_LYGHE)

HSP 1 Score: 234 bits (597), Expect = 1.600e-71
Identity = 110/181 (60.77%), Postives = 137/181 (75.69%), Query Frame = 2 
Query:  734 KNPRVFLDIEIADASGAKSRLTKGKKVGRITFELYENVVPKTAENFRSLCTGEKPRGASGFPLSFLGNIFHRIVPDFMAQGGDITREDGSGGESIYGPTFADESFALKHDQPGLLSMANSGRNSNNSQFFITFGPLPWLDSKHVVFGKVVEGMEVVRKIEDCGTTSGEPTKRVQIAECGQV 1276
            K  RVF DIEI             K VGR+TF+L+++VVPKTAENFR+LCTGEK +GASG PL F  +IFHR++PDFM QGGD TR +G+GGESIYG  FADE+F L+HD+PGLLSMAN+G N+N SQFFIT  P PWLD KHVVFG+V +G ++V+KIE  GT +G P  R+ I +CG++
Sbjct:   10 KMKRVFFDIEIGQ-----------KAVGRVTFKLFDDVVPKTAENFRALCTGEKGKGASGKPLHFKNSIFHRVIPDFMIQGGDFTRHNGTGGESIYGEKFADENFRLRHDKPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGQVEDGFDIVKKIEQQGTANGSPRTRIVITDCGEL 179
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BLAST of mRNA_H-canaliculatus_F_contig132.2630.1 vs. uniprot
Match: A0A7S2V5N2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5N2_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.720e-70
Identity = 135/271 (49.82%), Postives = 178/271 (65.68%), Query Frame = 2 
Query:  485 RKSNKAETKKKRSWEIDAEADDNDDSHEATAAPSEAFLQLAKDLEEKEKIQRENEERLRNQDALAAEAANKLRKKEELRKANAKNPRVFLDIEIA------DASGAKSRLTKGKKVGRITFELYENVVPKTAENFRSLCTGEKPR-GASGFPLSFLGNIFHRIVPDFMAQGGDITREDGSGGESIYGPTFADESFALKHDQPGLLSMANSGRNSNNSQFFITFGPLPWLDSKHVVFGKVVEGMEVVRKIEDCGTTSGEPTKRVQIAECGQV 1276
            +K  K + K+K  W+ + E    D+S E  A PSEAF++L KDLEEKE+I++EN  R+  +  +  E+ N+L   E  +  +  NP VF+D+ +       D +G   +  + ++ GR+ FEL   V P+TAENFR LCTGEK R      PL +LGNIFHRI+P FMAQGGDIT EDG+GGESIYG  F DE+F LKH   G LSMANSG +SN+SQFF+T GP   LD KHVVFG+++EG + +R IE  GT SGE  K+V I  CG++
Sbjct:   12 KKDQKQKLKRKPKWQQEQE----DNSSEEEAVPSEAFMKLQKDLEEKERIKKEN--RVSKRGDIKKESHNEL---EPAQHESGPNPVVFMDVSVREKGVSYDQNGIPRKQQEQQR-GRLVFELLSAVAPRTAENFRCLCTGEKGRIPGKSLPLHYLGNIFHRIIPGFMAQGGDITHEDGTGGESIYGGKFRDENFLLKHHSAGQLSMANSGPHSNSSQFFLTLGPARHLDGKHVVFGQMLEGEDFLRIIESAGTKSGETIKQVTIDGCGEL 272
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BLAST of mRNA_H-canaliculatus_F_contig132.2630.1 vs. uniprot
Match: A0A0B6ZH80_9EUPU (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6ZH80_9EUPU)

HSP 1 Score: 231 bits (589), Expect = 2.050e-70
Identity = 114/180 (63.33%), Postives = 133/180 (73.89%), Query Frame = 2 
Query:  737 NPRVFLDIEIADASGAKSRLTKGKKVGRITFELYENVVPKTAENFRSLCTGEKPRGASGFPLSFLGNIFHRIVPDFMAQGGDITREDGSGGESIYGPTFADESFALKHDQPGLLSMANSGRNSNNSQFFITFGPLPWLDSKHVVFGKVVEGMEVVRKIEDCGTTSGEPTKRVQIAECGQV 1276
            NP+VF DI I           +GK  GRI FELY+N+VPKTAENFR+LCTGEK  GASG PL F G+ FHRI+PDFM QGGD TR +G+GGESIYG  FADE+F  KH  PGLLSMAN+G N+N SQFFIT  P  WLD KHVVFGKVVEG+ +V+ IE  G+ SG+P   V IAECG++
Sbjct:    5 NPKVFFDITI-----------QGKSAGRIVFELYKNIVPKTAENFRALCTGEKGTGASGKPLHFKGSSFHRIIPDFMLQGGDFTRGNGTGGESIYGEKFADENFTEKHTIPGLLSMANAGPNTNGSQFFITTVPCSWLDGKHVVFGKVVEGLSLVKTIEAQGSGSGKPKATVTIAECGEL 173
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BLAST of mRNA_H-canaliculatus_F_contig132.2630.1 vs. uniprot
Match: A0A455B6L4_PHYMC (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Physeter macrocephalus TaxID=9755 RepID=A0A455B6L4_PHYMC)

HSP 1 Score: 230 bits (586), Expect = 5.750e-70
Identity = 114/182 (62.64%), Postives = 135/182 (74.18%), Query Frame = 2 
Query:  731 AKNPRVFLDIEIADASGAKSRLTKGKKVGRITFELYENVVPKTAENFRSLCTGEKPRGASGFPLSFLGNIFHRIVPDFMAQGGDITREDGSGGESIYGPTFADESFALKHDQPGLLSMANSGRNSNNSQFFITFGPLPWLDSKHVVFGKVVEGMEVVRKIEDCGTTSGEPTKRVQIAECGQV 1276
            AKNP+VF DI I            GK  GRI FEL++N+VP+TAENFR+LCTGEK RG SG PLS+ G  FHRI+P+FM QGGD T  +G+GGESIYG  FADE+F LKH +P LLSMANSG N+N SQFFIT  P PWLD KHVVFGKVVEG +VV+++E  GT SG   + V IA+CGQ+
Sbjct:    2 AKNPQVFFDITIG-----------GKPAGRIVFELFKNIVPRTAENFRALCTGEKGRGVSGKPLSYKGCSFHRIIPEFMCQGGDFTNFNGTGGESIYGMKFADENFELKHTEPFLLSMANSGPNTNGSQFFITTVPCPWLDGKHVVFGKVVEGTDVVKQMEQQGTRSGTVKQPVVIADCGQL 172
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BLAST of mRNA_H-canaliculatus_F_contig132.2630.1 vs. uniprot
Match: UPI0018FE4581 (peptidylprolyl isomerase n=1 Tax=Streptomyces sp. NRRL F-5126 TaxID=1463857 RepID=UPI0018FE4581)

HSP 1 Score: 226 bits (577), Expect = 1.140e-68
Identity = 108/180 (60.00%), Postives = 133/180 (73.89%), Query Frame = 2 
Query:  737 NPRVFLDIEIADASGAKSRLTKGKKVGRITFELYENVVPKTAENFRSLCTGEKPRGASGFPLSFLGNIFHRIVPDFMAQGGDITREDGSGGESIYGPTFADESFALKHDQPGLLSMANSGRNSNNSQFFITFGPLPWLDSKHVVFGKVVEGMEVVRKIEDCGTTSGEPTKRVQIAECGQV 1276
            NPRV+ D+ + D +            GRITFEL+ +VVPKTAENFR+LCTGE+  G SG PL F G+ FHR++P FM QGGD TR DG+GGESIYG  FADE+F LKHD PG+LSMAN+GRN+N SQFFI   P PWLD KHVVFGKV++ ME+V+ IE  G+ +G+ TK V I+ CGQ+
Sbjct:    2 NPRVYFDMTVGDVAA-----------GRITFELFADVVPKTAENFRALCTGERGVGKSGKPLHFEGSKFHRVIPQFMCQGGDFTRGDGTGGESIYGGKFADENFDLKHDVPGILSMANAGRNTNGSQFFICTVPTPWLDGKHVVFGKVIDNMELVKTIESVGSQNGKTTKDVVISACGQL 170
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BLAST of mRNA_H-canaliculatus_F_contig132.2630.1 vs. uniprot
Match: A0A8K0AHI2_ANDGO (Cyclophilin (Peptidylprolyl isomerase) n=1 Tax=Andalucia godoyi TaxID=505711 RepID=A0A8K0AHI2_ANDGO)

HSP 1 Score: 226 bits (577), Expect = 1.180e-68
Identity = 106/180 (58.89%), Postives = 133/180 (73.89%), Query Frame = 2 
Query:  737 NPRVFLDIEIADASGAKSRLTKGKKVGRITFELYENVVPKTAENFRSLCTGEKPRGASGFPLSFLGNIFHRIVPDFMAQGGDITREDGSGGESIYGPTFADESFALKHDQPGLLSMANSGRNSNNSQFFITFGPLPWLDSKHVVFGKVVEGMEVVRKIEDCGTTSGEPTKRVQIAECGQV 1276
            NPRVF D+ I             +  GRI FEL+ N+VPKTAENFRSLCTGEK  G SG PL + G+IFHR++P FMAQGGD TR +G+GGESIYG  FADE+F LKHD+PGLLSMAN+G  +N SQFF+TF   PWLD KHVVFG+VVEG E++ K+E  G+ SG+    +++++CGQ+
Sbjct:    3 NPRVFFDLSI-----------NNQPAGRIVFELFANIVPKTAENFRSLCTGEKGTGKSGKPLHYKGSIFHRVIPQFMAQGGDFTRGNGTGGESIYGEKFADENFKLKHDKPGLLSMANAGPGTNGSQFFLTFVECPWLDGKHVVFGQVVEGKELLPKLESLGSQSGKTKVPIEVSDCGQL 171
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BLAST of mRNA_H-canaliculatus_F_contig132.2630.1 vs. uniprot
Match: A0A388MFL0_CHABU (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388MFL0_CHABU)

HSP 1 Score: 226 bits (577), Expect = 1.220e-68
Identity = 108/180 (60.00%), Postives = 132/180 (73.33%), Query Frame = 2 
Query:  737 NPRVFLDIEIADASGAKSRLTKGKKVGRITFELYENVVPKTAENFRSLCTGEKPRGASGFPLSFLGNIFHRIVPDFMAQGGDITREDGSGGESIYGPTFADESFALKHDQPGLLSMANSGRNSNNSQFFITFGPLPWLDSKHVVFGKVVEGMEVVRKIEDCGTTSGEPTKRVQIAECGQV 1276
            NP VF DI I            G+KVGRI  ELY+NVVP+TAENFR+LCTGEK  G SG PL + G  FHR++P FM QGGD TR DG+GGESIYG  FADE+F  KH +PG+LSMAN+G N+N SQFF+   P PWLD KHVVFGKV++GM+VV K+E  G++SG  ++ V IA+CGQ+
Sbjct:    3 NPTVFFDITIG-----------GRKVGRIVMELYKNVVPRTAENFRALCTGEKGTGRSGRPLHYKGCTFHRVIPKFMCQGGDFTRGDGTGGESIYGAKFADENFQHKHTEPGVLSMANAGPNTNGSQFFLCTVPTPWLDGKHVVFGKVIQGMDVVAKVESVGSSSGRTSQPVVIADCGQL 171
[Close]
BLAST of mRNA_H-canaliculatus_F_contig132.2630.1 vs. uniprot
Match: A2DT06_TRIVA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Trichomonas vaginalis TaxID=5722 RepID=A2DT06_TRIVA)

HSP 1 Score: 225 bits (574), Expect = 3.540e-68
Identity = 104/181 (57.46%), Postives = 131/181 (72.38%), Query Frame = 2 
Query:  734 KNPRVFLDIEIADASGAKSRLTKGKKVGRITFELYENVVPKTAENFRSLCTGEKPRGASGFPLSFLGNIFHRIVPDFMAQGGDITREDGSGGESIYGPTFADESFALKHDQPGLLSMANSGRNSNNSQFFITFGPLPWLDSKHVVFGKVVEGMEVVRKIEDCGTTSGEPTKRVQIAECGQV 1276
            K P+ F DI I           +G KVG+I FEL+ ++VPKTAENFR+LCTGEK  G SG PLS+ G +FHRI+P FM QGGD TR +G+GGESIYG  F DE+F +KHD+PGLLSMAN+G N+N SQFFIT    PWLD  H VFG+V+EGM++V++IE CGT SG P     + +CG++
Sbjct:    3 KRPKTFFDISI-----------RGDKVGKIVFELFNDIVPKTAENFRALCTGEKGIGKSGMPLSYKGTMFHRIIPQFMIQGGDFTRFNGTGGESIYGMKFDDENFKVKHDKPGLLSMANAGPNTNGSQFFITTVETPWLDGHHCVFGQVIEGMDIVKQIESCGTESGRPRAMCMVTDCGEM 172
[Close]
BLAST of mRNA_H-canaliculatus_F_contig132.2630.1 vs. uniprot
Match: A0A0G4FPL4_VITBC (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FPL4_VITBC)

HSP 1 Score: 224 bits (571), Expect = 1.980e-67
Identity = 108/182 (59.34%), Postives = 133/182 (73.08%), Query Frame = 2 
Query:  731 AKNPRVFLDIEIADASGAKSRLTKGKKVGRITFELYENVVPKTAENFRSLCTGEKPRGASGFPLSFLGNIFHRIVPDFMAQGGDITREDGSGGESIYGPTFADESFALKHDQPGLLSMANSGRNSNNSQFFITFGPLPWLDSKHVVFGKVVEGMEVVRKIEDCGTTSGEPTKRVQIAECGQV 1276
            A NP+V+ DI I            G+ +GR+TF LY +VVPKTAENFR+LCTGEK +G S  PL + G+ FHRI+P FM QGGD T  DG GGESIYG  FADE+F +KH + GLLSMAN+G N+N SQFFIT    PWLD KHVVFG+V EG +VV+++E  GT SG PT++VQIA+CGQ+
Sbjct:   24 AANPKVWFDISIG-----------GRAMGRVTFLLYADVVPKTAENFRALCTGEKGKGQSQVPLHYKGSYFHRIIPHFMCQGGDFTEGDGRGGESIYGMKFADENFKIKHSKKGLLSMANAGPNTNGSQFFITVDETPWLDGKHVVFGEVTEGYDVVQQMERVGTRSGTPTQKVQIADCGQL 194
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig132.2630.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2J2_ECTSI1.040e-12272.79PPIase cyclophilin-type domain-containing protein ... [more]
A0A146LV45_LYGHE1.600e-7160.77Peptidyl-prolyl cis-trans isomerase (Fragment) n=1... [more]
A0A7S2V5N2_9STRA1.720e-7049.82Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A0B6ZH80_9EUPU2.050e-7063.33Peptidyl-prolyl cis-trans isomerase (Fragment) n=1... [more]
A0A455B6L4_PHYMC5.750e-7062.64Peptidyl-prolyl cis-trans isomerase n=1 Tax=Physet... [more]
UPI0018FE45811.140e-6860.00peptidylprolyl isomerase n=1 Tax=Streptomyces sp. ... [more]
A0A8K0AHI2_ANDGO1.180e-6858.89Cyclophilin (Peptidylprolyl isomerase) n=1 Tax=And... [more]
A0A388MFL0_CHABU1.220e-6860.00Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chara ... [more]
A2DT06_TRIVA3.540e-6857.46Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tricho... [more]
A0A0G4FPL4_VITBC1.980e-6759.34Peptidyl-prolyl cis-trans isomerase n=2 Tax=Vitrel... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig132contigH-canaliculatus_F_contig132:32843..37703 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score369.8
Seed ortholog evalue1.4e-99
Seed eggNOG ortholog2880.D7G2J2
KEGG koko:K01802
EggNOG free text desc.peptidyl-prolyl cis-trans isomerase activity
EggNOG OGsCOG0652@1,KOG0865@2759
EC5.2.1.8
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCyclophilin-like domain
Ec32 orthologEc-12_001720.1
Exons6
Model size1513
Cds size1038
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929058.260025-CDS-H-canaliculatus_F_contig132:32842..331781622929058.260025-CDS-H-canaliculatus_F_contig132:32842..33178Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig132 32843..33178 -
1696845663.5069883-CDS-H-canaliculatus_F_contig132:32842..331781696845663.5069883-CDS-H-canaliculatus_F_contig132:32842..33178Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig132 32843..33178 -
1622929058.2761488-CDS-H-canaliculatus_F_contig132:34045..341281622929058.2761488-CDS-H-canaliculatus_F_contig132:34045..34128Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig132 34046..34128 -
1696845663.517896-CDS-H-canaliculatus_F_contig132:34045..341281696845663.517896-CDS-H-canaliculatus_F_contig132:34045..34128Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig132 34046..34128 -
1622929058.2909036-CDS-H-canaliculatus_F_contig132:34447..345391622929058.2909036-CDS-H-canaliculatus_F_contig132:34447..34539Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig132 34448..34539 -
1696845663.5262272-CDS-H-canaliculatus_F_contig132:34447..345391696845663.5262272-CDS-H-canaliculatus_F_contig132:34447..34539Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig132 34448..34539 -
1622929058.3085299-CDS-H-canaliculatus_F_contig132:35234..353411622929058.3085299-CDS-H-canaliculatus_F_contig132:35234..35341Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig132 35235..35341 -
1696845663.5343764-CDS-H-canaliculatus_F_contig132:35234..353411696845663.5343764-CDS-H-canaliculatus_F_contig132:35234..35341Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig132 35235..35341 -
1622929058.3238876-CDS-H-canaliculatus_F_contig132:35839..362171622929058.3238876-CDS-H-canaliculatus_F_contig132:35839..36217Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig132 35840..36217 -
1696845663.5425706-CDS-H-canaliculatus_F_contig132:35839..362171696845663.5425706-CDS-H-canaliculatus_F_contig132:35839..36217Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig132 35840..36217 -
1622929058.3362849-CDS-H-canaliculatus_F_contig132:37186..372281622929058.3362849-CDS-H-canaliculatus_F_contig132:37186..37228Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig132 37187..37228 -
1696845663.5510216-CDS-H-canaliculatus_F_contig132:37186..372281696845663.5510216-CDS-H-canaliculatus_F_contig132:37186..37228Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig132 37187..37228 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929058.349383-UTR-H-canaliculatus_F_contig132:37228..377031622929058.349383-UTR-H-canaliculatus_F_contig132:37228..37703Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig132 37229..37703 -
1696845663.5596437-UTR-H-canaliculatus_F_contig132:37228..377031696845663.5596437-UTR-H-canaliculatus_F_contig132:37228..37703Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig132 37229..37703 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig132.2630.1prot_H-canaliculatus_F_contig132.2630.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig132 32843..37228 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig132.2630.1

>prot_H-canaliculatus_F_contig132.2630.1 ID=prot_H-canaliculatus_F_contig132.2630.1|Name=mRNA_H-canaliculatus_F_contig132.2630.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=346bp
MFRRKSNKAETKKKRSWEIDAEADDNDDSHEATAAPSEAFLQLAKDLEEK
EKIQRENEERLRNQDALAAEAANKLRKKEELRKANAKNPRVFLDIEIADA
SGAKSRLTKGKKVGRITFELYENVVPKTAENFRSLCTGEKPRGASGFPLS
FLGNIFHRIVPDFMAQGGDITREDGSGGESIYGPTFADESFALKHDQPGL
LSMANSGRNSNNSQFFITFGPLPWLDSKHVVFGKVVEGMEVVRKIEDCGT
TSGEPTKRVQIAECGQVPDEIEGQDVEDEEEEEEEEEEEREGGRRGKKRP
RVRLAKSDDGDDGDGGTVANSKDDANGDSVSNKVRSGSREGDGKG*
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mRNA from alignment at H-canaliculatus_F_contig132:32843..37703-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig132.2630.1 ID=mRNA_H-canaliculatus_F_contig132.2630.1|Name=mRNA_H-canaliculatus_F_contig132.2630.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4861bp|location=Sequence derived from alignment at H-canaliculatus_F_contig132:32843..37703- (Hapterophycus canaliculatus Oshoro5f female)
CAGGAAGCAGCCCCGGATAGAAGCTGAACTAAAGAGTAGAGGAAAGAGAC
AAAGGGAGAGCCAGCAAGCTAGAGCCAGCGGCTGGCCGGTGCGTGACATC
AAGTAGAGGACGGCCCAATCGAAAAAAATTGCGCCGCATGGTTTCTTCGT
TGAAGTCTCCCCTCTCCCCTCTCCTCCTCCTCGAGCTTGAGAGTGAATTA
ACACGCGGAGTAGGAGCTCAAACAGCTGTAAAATACTTGTTAGGCGCTTC
TCCAGAAGGAAAGCTGCCTTGCCAACCGCCGTGTCTGAGTTATTAGCTTT
TGCTCTCTGCGAAATTCGATCTACTTGTACGCCCCCACCCCCCCGTCCCC
CTTAATCAGAATGTTTGAATGGCCCTCCCTGTCATCCTGCACTGGGCAAC
TATTTCCTCTGGGGTGCCCCCAGTTCAGGAGATCAAGTACCGGCTGCGAC
CGGATTTCGCGTTCAGCTCGTCGTCATGTTTCGGCGAAAATCCAACAAGG
CAGAAACGAAGAAGAAGGTGAGAAAGAAGGGTTGTGCTTTTCGAATCCGG
GAGAGCAGGGTTGTAACTGATCGTTCAACGATGTTTCAGACAGACACAAC
AGCAGTGCTCTCCCCGACGATCAGGCTGTTGACGAACACCAGGTAAACGC
AGAAGACAACCCACGTTCGAAATCCTGCTCGGGAACAGCAATTCGTATTA
GCGAAATGGACGTGCTGAAGGAGGACATGGCGGGGCTGTGGTTGAGAGCG
CCCGGAGAAAGAACTACTGTAGGGATCGAGCTTTCCTGCGAACAGTGTTG
TCGAGCCACACCTGTTCTCAATGTTGTTCACGTCCCGCTTGTTCAAACAG
CAACAAACTACCGAGATCTATAACCTGCGCTTCCACGGCGAAGTCAACTT
CACTTGGTTACTCCTTACTTGTAATCGTGAAAACTCGGATGAATTCGTCC
CATGAAATTGTACTTTGTAACATTGAACCGCGTCCATCCTACTGCTGTGC
CACGATCCCCCCTTCCTTCACCTGTGATATTGTAGGGCCGAGCCTGACGG
CCTTTTGCACTGGTGCATTGGTACTTCTGCTGGTGTTCATGTCTTATCCC
GTCCAACGCACTGAATCCCCACTACTGCTGTATGGCATTCAGCGGAAGCC
TGCTGTAATAGCATTCAGCGCGAGCCTCCTGGGACGCCTGGTGAGGCGTG
GATCAGAAGGTTTCCCTTCAGTTTTGTTGACTCTTTTTCTTGAAAACTCG
AGCTCCCTGTTTTGCTGGAAAAAAGAAAGTTTCCCCAACCGCCAGACCCA
CGACTCAACGAATAGTCGTCCAACCAGTAAGCTTCCCAAAATACAGCTAC
AATTGTACTTGTACCTGTATTGAGATCTTTCTCTTTATGGCTGGATCGAC
CCTGCTTTGCTCCGGGAAATTCAGCCCCCGAGAAAACTTTCGCATCGTGC
TTGTCGGTCACGACCCCGCCCTTCATCCAAATCCAGAGATCATGGGAGAT
CGACGCCGAAGCTGACGACAACGATGACAGCCATGAAGCGACCGCTGCTC
CGAGCGAGGCGTTCCTCCAGCTGGCCAAGGATCTCGAGGAGAAGGAGAAG
ATCCAGAGAGAGAACGAGGAAAGGCTGAGAAACCAGGACGCCCTCGCCGC
CGAGGCCGCCAACAAGCTTCGGAAGAAGGAGGAGCTGAGAAAGGCCAACG
CCAAGAACCCGCGAGTGTTTCTCGACATCGAGATCGCCGACGCCTCGGGC
GCGAAGAGCCGCTTGACGAAGGGCAAAAAAGTGGGGCGCATCACCTTCGA
GCTCTACGAGAACGTTGTGCCCAAGACCGCGGAAAACTTTCGCTCCCTTT
GCACGGGGGAGAAGGTGGGTCGAATCGGGTCGGGAGATGGGACCGTCGAC
CGCCGCACTCGAAGCCGGCCCGCTGCACTCTCGAGGGTCGTCTCCGGCGT
TGGCGTGCGAAGCGGTGGCCGCGTGTTGTGCCGGGCTCTCTCGTTGAGAG
TCGGCCATGCCGGCGCCACTGGTGGCTGGTGTTTGGGGTTCGGTGTGTGG
AGGAGGTGTCGCCTTTGGCGGATGTTTCAAAGGGGGTGAAGAAAGGGCCG
GGACGGGCTCCGCGAAAGAGCTGACCCAAGCCAAGCCTGGTTGCACAGAC
ATTTCAGGTCCAGTCCAGTGGTGTGGCCCGCGAACGGCGCGTTCTTCACT
TGTTCGCGACGACCGCGAATGGGACGACCTCAGGAGATAAGTTCTCTGCT
GTCGAACGCGTTCGTTGATCTCATCTTACTTGTGTCTCTGTCTTGTTTGA
ACCTTGCTTCCTTCCTCCCTCAACTGGCGTGGTGACCACGATGCCTCGAA
CCTCGACGTCAGCCGCGGGGGGCGTCGGGGTTCCCGCTAAGCTTCCTGGG
CAATATTTTTCACAGAATTGTGCCGGATTTCATGGCGCAGGGAGGGGACA
TTACGCGGGAAGACGGAAGGTGAGGCGAAGAACGGCGTCCGGAGTTAAAT
GATGAAAGTGGGAGAGACAACGAGACGAGGAGGTCAAAGAATCAAGGGAA
CGAGGTCGATCCACCGGAAAGGCAACAAGAAAGATAGAGAGATGCATGAG
AGACCGACTAGAGTGACAGACATACTCACACAGAGACAAACGCACGAAGA
TAGATAGACTGACACAGGCGTAGAGCGAGAGAACCGTACAACGAAAATGG
CCGGCCGACGTGCGAGGAGAGGCAGGGGCGAAGGCTGAGGAGGTCGGCGA
AGGTCATGAACGCGTATGTTTTAAGAACTTAAGGAACCATTCGCTTATTT
ACCTTTGTTCAACGCCCGCATGTAGATCGGTACCGCAGTTGTAGCCGTTC
GAGAGGAGGGACGCATGTCTGAGCGAGTGCTGCTCCCTGCGAACGCCGGT
CGAATCCGTGTTCGCCCAAAACAAGTCTGGCTGGTGTTCGCAATGCCTTG
CCCACACGAACTTCCCAACCATCGGTGAGACTAGACTTATGTTGAGCACG
TGATCGAGGGGCTTACCGACTTTTCGTGCGGTGCGGGAAAACTCTTGATG
GGCTGAGAGCCTCCCCAAATGAACCCACACGTTGCTTTTAACCGCTATTC
TTTTCGGCCGTGAGTCAAGTTTTTGTTTTCTCGCGTCGTGTGCTGCGTGT
CGCTCGCTCCACAGCGGCGGAGAGAGCATCTACGGACCCACGTTCGCCGA
CGAGAGCTTCGCACTTAAGCACGACCAACCTGGTTTGCTTTCAATGGCAA
ATTCAGGTCAGAAACAGATCCGAGATTTTGGTTGATGCCTCTGTCGCCGG
ACAGAGACGGATGGTGCTTCGCTCTCCATCTTCATGCAAGGCTGAGTTGT
GTCTTCACTCCTTTAAGGGTCGGCTGCGCCCTTTCCGAAAATATTTAGCG
GGGATCCGGTGGTCGCCTCTGCCTGTCTTCAACATGTGCACTTTCCATAT
TTCCTTGTGTGCCACTCTGCCTGCCTCGCCCTCTCTCTGTCTATCTGTCT
GTCTGTCTGTCTGTCACTCTCTCTCTCGCCCCTTCTGTCTTCGCGTCGGC
CCTTCTTTCTCCCTCGATCTGTCAGGCCGAAACAGCAACAACTCTCAGTT
CTTCATCACCTTCGGCCCCCTCCCTTGGCTGGACTCGAAGCACGTCGTGT
TCGGCAAGGTAAGTTCCCGCGACTAGATTCCCTTGCGCGGGTACCACGCG
GAAATCCACGCAAAGCTCGTCTCTTTTGAACCAGCGTATGTGTGCAGGGT
CTGTTGTCATGCCACTGACCTATATCTACAATCCGGTAGATTAGTATCCA
GCAGCAATCAATCTTCCCTTTTGAAAGAAAACACAACAACACTGTTAGAA
CACCTCCTGAGGTACGTCGTGTGAAGCGTAGCCCGAGGCTTCTGTTGAGT
TCAAAACAGTGAGGGTTCATTGATGGGGACAAAAGCATGAATAGGACGGA
GTTTGTGCGTAACTTACCGCGATTGTATGGAATATACGATACTCAGTACT
TCGAAAATAAACGTGTGATGATGGATCATGAACTGCGGTCAGCAACATAA
TATAATGAAAGTGTACGTTCTCGAAAAATACTCCTTGTGATGCGACGCGA
AGAAACGAAGTAAGTGAAGAGTTTACTGCCGTTTAGATAGTATTTGGTGT
TGCCCGTCCCGAGAGCATGTCAGTGGCGGAGCAGAAGGAAGCAGATAGCG
TCCCGGACGAGAAGGTGCATGTAGGTGACTATCCTCATCATCAGCAGCGG
GTGTACAGGTTGTGCTCTCGACGAAAACACCTTTCGTCAAGGGGCTCCTG
TCTATGTTGCTCCGCCGGCGTACGAGACGAACTCCCTGAAAAGAAGTGGC
GTGCGTATCAAAGCCGACCGAAAATGGGGTCTCCCACCATCTCCCTTCCT
CCCGCTAGGCGCCGCCCGACACAGCAACAGAGTCCGCGAGGCATTTCCAA
AAGTGCCAAGCCGCCCTTCTCTCCGCCCGCTCGTCGCTTCGCCTGATATT
CGCGATACCAAAACGTCCTCGTCAGGTCGTGGAAGGTATGGAAGTGGTGC
GAAAGATCGAGGACTGCGGCACGACCTCGGGAGAGCCTACGAAGAGGGTG
CAGATCGCCGAATGCGGGCAAGTTCCGGATGAGATAGAGGGCCAAGACGT
GGAAGATGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGGGAGGGGG
GCCGACGCGGGAAAAAGCGGCCTAGAGTACGGTTGGCGAAAAGTGATGAT
GGTGACGATGGCGATGGTGGTACTGTTGCTAATTCGAAGGATGATGCCAA
CGGGGACTCGGTATCGAACAAGGTCAGGTCTGGCAGCAGAGAGGGGGACG
GGAAGGGCTAG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig132:32843..37703-

>mRNA_H-canaliculatus_F_contig132.2630.1 ID=mRNA_H-canaliculatus_F_contig132.2630.1|Name=mRNA_H-canaliculatus_F_contig132.2630.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2076bp|location=Sequence derived from alignment at H-canaliculatus_F_contig132:32843..37703- (Hapterophycus canaliculatus Oshoro5f female)
ATGTTTCGGCGAAAATCCAACAAGGCAGAAACGAAGAAGAAGATGTTTCG
GCGAAAATCCAACAAGGCAGAAACGAAGAAGAAGAGATCATGGGAGATCG
ACGCCGAAGCTGACGACAACGATGACAGCCATGAAGCGACCGCTGCTCCG
AGCGAGGCGTTCCTCCAGCTGGCCAAGGATCTCGAGGAGAAGGAGAAGAT
CCAGAGAGAGAACGAGGAAAGGCTGAGAAACCAGGACGCCCTCGCCGCCG
AGGCCGCCAACAAGCTTCGGAAGAAGGAGGAGCTGAGAAAGGCCAACGCC
AAGAACCCGCGAGTGTTTCTCGACATCGAGATCGCCGACGCCTCGGGCGC
GAAGAGCCGCTTGACGAAGGGCAAAAAAGTGGGGCGCATCACCTTCGAGC
TCTACGAGAACGTTGTGCCCAAGACCGCGGAAAACTTTCGCTCCCTTTGC
ACGGGGGAGAAGAGATCATGGGAGATCGACGCCGAAGCTGACGACAACGA
TGACAGCCATGAAGCGACCGCTGCTCCGAGCGAGGCGTTCCTCCAGCTGG
CCAAGGATCTCGAGGAGAAGGAGAAGATCCAGAGAGAGAACGAGGAAAGG
CTGAGAAACCAGGACGCCCTCGCCGCCGAGGCCGCCAACAAGCTTCGGAA
GAAGGAGGAGCTGAGAAAGGCCAACGCCAAGAACCCGCGAGTGTTTCTCG
ACATCGAGATCGCCGACGCCTCGGGCGCGAAGAGCCGCTTGACGAAGGGC
AAAAAAGTGGGGCGCATCACCTTCGAGCTCTACGAGAACGTTGTGCCCAA
GACCGCGGAAAACTTTCGCTCCCTTTGCACGGGGGAGAAGCCGCGGGGGG
CGTCGGGGTTCCCGCTAAGCTTCCTGGGCAATATTTTTCACAGAATTGTG
CCGGATTTCATGGCGCAGGGAGGGGACATTACGCGGGAAGACGGAAGCCG
CGGGGGGCGTCGGGGTTCCCGCTAAGCTTCCTGGGCAATATTTTTCACAG
AATTGTGCCGGATTTCATGGCGCAGGGAGGGGACATTACGCGGGAAGACG
GAAGCGGCGGAGAGAGCATCTACGGACCCACGTTCGCCGACGAGAGCTTC
GCACTTAAGCACGACCAACCTGGTTTGCTTTCAATGGCAAATTCAGCGGC
GGAGAGAGCATCTACGGACCCACGTTCGCCGACGAGAGCTTCGCACTTAA
GCACGACCAACCTGGTTTGCTTTCAATGGCAAATTCAGGCCGAAACAGCA
ACAACTCTCAGTTCTTCATCACCTTCGGCCCCCTCCCTTGGCTGGACTCG
AAGCACGTCGTGTTCGGCAAGGCCGAAACAGCAACAACTCTCAGTTCTTC
ATCACCTTCGGCCCCCTCCCTTGGCTGGACTCGAAGCACGTCGTGTTCGG
CAAGGTCGTGGAAGGTATGGAAGTGGTGCGAAAGATCGAGGACTGCGGCA
CGACCTCGGGAGAGCCTACGAAGAGGGTGCAGATCGCCGAATGCGGGCAA
GTTCCGGATGAGATAGAGGGCCAAGACGTGGAAGATGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGAGGGAGGGGGGCCGACGCGGGAAAAAGCGGC
CTAGAGTACGGTTGGCGAAAAGTGATGATGGTGACGATGGCGATGGTGGT
ACTGTTGCTAATTCGAAGGATGATGCCAACGGGGACTCGGTATCGAACAA
GGTCAGGTCTGGCAGCAGAGAGGGGGACGGGAAGGGCTAGGTCGTGGAAG
GTATGGAAGTGGTGCGAAAGATCGAGGACTGCGGCACGACCTCGGGAGAG
CCTACGAAGAGGGTGCAGATCGCCGAATGCGGGCAAGTTCCGGATGAGAT
AGAGGGCCAAGACGTGGAAGATGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGAGGGAGGGGGGCCGACGCGGGAAAAAGCGGCCTAGAGTACGGTTG
GCGAAAAGTGATGATGGTGACGATGGCGATGGTGGTACTGTTGCTAATTC
GAAGGATGATGCCAACGGGGACTCGGTATCGAACAAGGTCAGGTCTGGCA
GCAGAGAGGGGGACGGGAAGGGCTAG
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