mRNA_H-canaliculatus_F_contig1312.2576.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1312.2576.1
Unique NamemRNA_H-canaliculatus_F_contig1312.2576.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1312.2576.1 vs. uniprot
Match: A0A6H5JCW2_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCW2_9PHAE)

HSP 1 Score: 707 bits (1824), Expect = 2.290e-249
Identity = 445/616 (72.24%), Postives = 475/616 (77.11%), Query Frame = 1
Query:    1 MSTAVAGEAAAAAILPANAPLPLLDDGITVLSFNVLLPNGNDGWWMYKSYQPHVPEDHRVWAYRKSLMREYLLSKDADVVCVQEASAETFEDDFDFMKSAGYDCVLHSKFRFRSATFFKTSRLELACEKHKDRVLLTGLRTLPRVTAA--------------------DTQTPPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSISDG--RLVMVVNCHLTGGPVPERRMRQVFDGLDTARKEAAKLLAAXXXXXXXXXXXXXXXXXXXXXXXXXXKEAASATAGAPAPGTSVPVVVCGDFNSN-GRTAVWELLTAGLLEASYRERGYPETAITSKDKRQGFGPFGDVYEEAYGGEVHQGGTVLDIGGVGG---GTGPPPTFLVPLLHPHFLGEDGEGISARLQVALSEVFNALVAVHGKNHVAGNDEDGGXXXXXXXXXXXXXDGKKSSGDAEKTPFLPREGVEAWLMKINRAVGRGSEFRAAEAIMGPGPGGGLTLEDFYSIYAKELRDGKFWGVAHDLHALGVELPGGMPWVGPYAARFDRVFYSKATLEGIGALEPLCEEQMELVVGGDCLPNSWHPSDHLGVAGAFRFR 1770
            MST+ A  A A AILPA APLPLLDDG+TV+SFNVLLPNGNDGWWMYKSYQPHVPE+HRVW +RK+LMREYLLSKDAD+VCVQEASAETFE DFDFMK AGYD VLH+KFRFRSATFFKTSRLELA EKHKDRVL+TGLRTLP  T+                     + Q P                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS   G  RLVMVVNCHLTGGP PERRMRQV DGLD ARK+A KLL+      XXXXXXXXXXXXXXXXXXXXX  A         PGTSVPVVVCGD NSN G TAV ELL+ G++ AS+RE GYPETAITSKDKRQGFGPFGD+YEEAYGG    G  V   GG+GG     GPPPTFLVPLLHPHFL EDGEG+SARLQVALSE F +LV   G N     D D         XXXXXX G  ++  AE   FLPREGVEAWLMKINR++GRGSEFRAAEAIMGPGPGGGLTLEDF+SIYA ELR GKFWGVAHDLHALGVELPGG+PWVGPY ARFDRVFYSKATLE +GA+EPLCEE+ ELV GGDCLPNSWHPSDHL VAGAFRFR
Sbjct:    1 MSTSSAAPAPAVAILPAKAPLPLLDDGLTVVSFNVLLPNGNDGWWMYKSYQPHVPEEHRVWPFRKALMREYLLSKDADIVCVQEASAETFETDFDFMKDAGYDHVLHTKFRFRSATFFKTSRLELASEKHKDRVLVTGLRTLPPATSVPSSQAXXXXXXXPPPGNERTEVQEPSEDVDPSSKTDAQPSNRGGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSRSGKGRLVMVVNCHLTGGPAPERRMRQVLDGLDAARKDAVKLLSEEAEAAXXXXXXXXXXXXXXXXXXXXXXXA---------PGTSVPVVVCGDLNSNSGHTAVCELLSTGVVGASFREGGYPETAITSKDKRQGFGPFGDIYEEAYGGGDPAGPGVG--GGMGGEPTSNGPPPTFLVPLLHPHFLSEDGEGVSARLQVALSEAFYSLVGACG-NTARAEDND------PSPXXXXXXXGDPTTPGAEPEAFLPREGVEAWLMKINRSLGRGSEFRAAEAIMGPGPGGGLTLEDFFSIYASELRGGKFWGVAHDLHALGVELPGGVPWVGPYTARFDRVFYSKATLEAVGAMEPLCEEERELVAGGDCLPNSWHPSDHLAVAGAFRFR 598          
BLAST of mRNA_H-canaliculatus_F_contig1312.2576.1 vs. uniprot
Match: A0A7S1EDE4_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EDE4_HEMAN)

HSP 1 Score: 291 bits (746), Expect = 2.950e-88
Identity = 211/586 (36.01%), Postives = 272/586 (46.42%), Query Frame = 1
Query:   25 AAAAAILPANAPLPLLD-DGITVLSFNVLLPNGNDGWWMYKSYQPHVPEDHRVWAYRKSLMREYLLSKDADVVCVQEASAETFEDDFDFMKSAGYDCVLHSKFRFRSATFFKTSRLELACEKHKDRVLLTGLRTLPRVTAADTQTPPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSISDGRLVMVVNCHLTGGPVPERRMRQVFDGLDTARKEAAKLLAAXXXXXXXXXXXXXXXXXXXXXXXXXXKEAASATAGAPAPGTSVPVVVCGDFN-SNGRTAVWELLTAGLLEASYRERGYPETAITSKDKRQGFGPFGDVYEEAYGGEVHQGGTVLDIGGVGGGTGPPPTFLVPLLHPHFLGEDGEGISARLQVALSEVFNALVAVHGKNHVAGNDEDGGXXXXXXXXXXXXXDGKKSSGDAEKTPFLPREGVEAWLMKINRAVGRGSEFRAAEAIMGPGPGGGLTLEDFYSIYAKELRDGKFWGVAHDLH---ALGVELPGGMPWVGPYAARFDRVFYSKATLEGIGALEPLCEEQMELVVGGDCLPNSWHPSDHLGVAGAFRF 1767
            AAA  I+    PLP L  +G ++ SFNVLLPN  DGWW+YK + P V  +HR W +R+ LM E +LS  AD+V +QEA+AE+FE+DF FM  AGY  VLHSK RFR+ATFFKT R EL  +  +DR L+T L+                                                                     G+ V V NCHL+ GP P++R+R + D LD  RKEAAK    XXXXXXXXXXXX                                VVVCGDFN S+  +AV +LLT G +E  Y E  YP   ++SK K+Q  G F D     Y                     PP TF+ PLL   F+ E GE     +  A+ E                                     K S G      ++ RE ++AWL+ IN+ +GRGSE R+A  +M     G L L+DF  +Y  EL++GKFWGV +DL    + GV+  G      P+  RFD V+++  TL      +PL +EQ  L    D LPNSWHPSDHL  + AFR+
Sbjct:   69 AAARMIISPQEPLPQLGAEGFSLASFNVLLPNSKDGWWIYKYFGPSVSAEHREWPHRQKLMSEIMLSAKADIVAIQEAAAESFEEDFAFMSDAGYSHVLHSKLRFRTATFFKTDRFELLSQFPRDRGLVTALKAK-----------------------------------------------------------------EGGQTVYVCNCHLSAGPFPDKRVRSLHDSLDQVRKEAAKAXXXXXXXXXXXXXXXCR------------------------------VVVCGDFNDSSEESAVRQLLTKGEVEGGYVEPAYPHVEMSSKAKKQALGTFEDSIAVGYAPNP-----------------PPSTFIAPLLDTLFVKEGGEEGKVEMTDAVKEAVGKAFQ------------------------------KVSGGKG----YMDREDIDAWLVSINKQLGRGSESRSAARLMEERGEGKLLLQDFEEVYLSELKEGKFWGVDYDLDQALSCGVDKSG----EAPFQTRFDYVWHTSETLSVEAVRDPLTQEQRALAAATDPLPNSWHPSDHLIQSCAFRY 504          
BLAST of mRNA_H-canaliculatus_F_contig1312.2576.1 vs. uniprot
Match: D8LJ73_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ73_ECTSI)

HSP 1 Score: 273 bits (699), Expect = 1.070e-84
Identity = 125/142 (88.03%), Postives = 132/142 (92.96%), Query Frame = 1
Query: 1345 AEKTPFLPREGVEAWLMKINRAVGRGSEFRAAEAIMGPGPGGGLTLEDFYSIYAKELRDGKFWGVAHDLHALGVELPGGMPWVGPYAARFDRVFYSKATLEGIGALEPLCEEQMELVVGGDCLPNSWHPSDHLGVAGAFRFR 1770
            AE   FLPREGVEAWLMKINR++GRGSEFRAAEAIMGPGPGGGLTLEDF+SIYA ELR GKFWGVAHDLHALGVELPGG+PWVGPY ARFDRVFYSKATLE +GA+EPLCEE+ ELV GGDCLPNSWHPSDHL VAGAFRFR
Sbjct:  111 AEPEAFLPREGVEAWLMKINRSLGRGSEFRAAEAIMGPGPGGGLTLEDFFSIYASELRGGKFWGVAHDLHALGVELPGGIPWVGPYTARFDRVFYSKATLEAVGAMEPLCEEERELVAGGDCLPNSWHPSDHLAVAGAFRFR 252          
BLAST of mRNA_H-canaliculatus_F_contig1312.2576.1 vs. uniprot
Match: A0A813KIP1_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KIP1_POLGL)

HSP 1 Score: 253 bits (646), Expect = 1.670e-72
Identity = 194/590 (32.88%), Postives = 247/590 (41.86%), Query Frame = 1
Query:   34 AAILPANAPLPLLDDGITVLSFNVLLPNGNDGWWMYKSYQPHVPEDHRVWAYRKSLMREYLLSKDADVVCVQEASAETFEDDFDFMKSAGYDCVLHSKF-RFRSATFFKTSRLELACEKHKDRVLLTGLRTLPRVTAADTQTPPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSISDGRLVMVVNCHLTGGPVPERRMRQVFDGLDTARKEAAKLLAAXXXXXXXXXXXXXXXXXXXXXXXXXXKEAASATAGAPAPGTSVPVVVCGDFNSNGRTAVWELLTAGLLEASY------RERGYPETAITSKDKRQGFGPFGDVYEEAYGGEVHQGGTVLDIGGVGGGTGPPPTFLVPLLHPHFLGEDGEGISARLQVALSEVFNALVAVHGKNHVAGNDEDGGXXXXXXXXXXXXXDGKKSSGDAEKTPFLPREGVEAWLMKINRAVGRGSEFRAAEAIMGPGPGGGLTLEDFYSIYAKELRDGKFWGVAHDLHAL---GVELPGGMPWVGPYAARFDRVFYSKATLEGIGALEPLCEEQMELVVGG--DCLPNSWHPSDHLGVAGAFRF 1767
            A +LPA +PLP    G + LS+NVLLPN  DGWW+YK Y+   P D   W  R++L+R  LL   AD +C+QE S  TF +DF F+  AGYD  LH+K  R R ATF+   R E    +HKDR L+TGLR      A  T                                                              V VVN HL  GP  +RR+RQ  + L+T  KEA +L                                     G  A  T  P V CGDFNS GR+AV ELL  G +   +       ERG     +TSK KRQ  G F D  E AYG                     P T LV  +    L +DG  ++  +  A+   FN                                          +   + +  VE+WLM++NRA+GRGSE+R A           L  EDF  IY +EL +GKFWGV HDL  L   G+ +P      GP   RFD ++++ +TL+  G  EPL +E  + V G   + LPNSWHPSDHL VA  F F
Sbjct:  185 ACVLPAGSPLPR--GGFSCLSYNVLLPNSGDGWWIYKYYRD--PGDEASWPARQALLRAQLLGAAADAICLQECSEATFAEDFKFLTEAGYDVHLHNKTGRMRPATFWLGERFECVAAQHKDRTLITGLRARQGPDAGST--------------------------------------------------------------VFVVNGHLAAGPSADRRLRQAHEALETVAKEAKRL-------------------------------------GVDAART--PTVFCGDFNSQGRSAVRELLATGEVGPEFCEGGDRTERGEGGKQVTSKVKRQTLGHFTDAAELAYGERP-----------------VPATMLVANIDSKMLKDDGT-LTDGMVAAVRAAFNKC--------------------------------------CPQGSVMSKVDVESWLMRVNRALGRGSEYRRALQAFERRGEETLEFEDFLGIYREELEEGKFWGVEHDLRVLAGSGLAVPSD----GPCQLRFDYIYFTTSTLQLKGVREPLSDEHRQRVFGEPWEVLPNSWHPSDHLPVAAVFDF 609          
BLAST of mRNA_H-canaliculatus_F_contig1312.2576.1 vs. uniprot
Match: A0A7S4Q6K6_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4Q6K6_9DINO)

HSP 1 Score: 233 bits (595), Expect = 1.420e-65
Identity = 180/579 (31.09%), Postives = 238/579 (41.11%), Query Frame = 1
Query:   64 PLLDDGITVLSFNVLLPNGNDGWWMYKSYQPHVPEDHRVWAYRKSLMREYLLSKDADVVCVQEASAETFEDDFDFMKS-AGYDCVLHSKF-RFRSATFFKTSRLELACEKHKDRVLLTGLRTLPRVTAADTQTPPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSISDGRLVMVVNCHLTGGPVPERRMRQVFDGLDTARKEAAKLLAAXXXXXXXXXXXXXXXXXXXXXXXXXXKEAASATAGAPAPGTSVPVVVCGDFNSNGRTAVWELLTAGLLEASYRE------RGYPETAITSKDKRQGFGPFGDVYEEAYGGEVHQGGTVLDIGGVGGGTGPPPTFLVPLLHPHFLGEDGEGISARLQVALSEVFNALVAVHGKNHVAGNDEDGGXXXXXXXXXXXXXDGKKSSGDAEKTPFLPREGVEAWLMKINRAVGRGSEFRAAEAIMGPGPGGGLTLEDFYSIYAKELRDGKFWGVAHDLHALGVELPGGMPWVGPYAARFDRVFYSKATLEGIGALEPLCEEQMELVVGG--DCLPNSWHPSDHLGVAGAFRFR 1770
            P  DD  +V+S+NVLLPN  DGWW+YK Y+     DH  W  R++L++        D++C+QE S  +FEDDF F+    GY+ +LH K  R R ATF+K    +     HKDR L   L+ L                                                                  DGR++  VN HL+ G   +RR+RQV + LD   KE  +L                                     G  A GT  PV+ CGDFNS G TAV ELLT G++   +RE      RG  +  +TSK + Q    FGD  EEA+ G                   PP T L   +    L  DG    A ++ A+   F                                     SSG+      + +  +E WL+ IN  +GRGSE+R    +        L+ EDF  +Y +EL +GKFWGV HDL  LG      +P  GP   RFD V+YS+ +L  +G  EPL EE+   V G   + LPN+WHPSDHL V  AF  R
Sbjct:  145 PSGDDVFSVMSYNVLLPNSQDGWWIYKYYRQRG--DHAEWPARQALLKRQFQDASVDILCLQEVSDLSFEDDFGFLSGDLGYEGLLHEKKGRMRPATFWKRGLWQQVGALHKDRTLAVALKRL--------------------------------------------------------------GGSHDGRVIFAVNGHLSAGWNADRRLRQVHEALDALVKECKRL-------------------------------------GLEAAGT--PVIFCGDFNSQGSTAVRELLTRGIVGPEFREGGDPTERGQEDKPVTSKVRSQAVALFGDAAEEAFAGS------------------PPATILAADIDSKMLHSDGSPTPALIE-AVHSAFKCC---------------------------------SSSGEV-----MSKGDIERWLVIINGQLGRGSEYRYVMDVCEKAGKDELSAEDFLGLYKEELVEGKFWGVEHDLQVLG-GFGLAVPAEGPCQLRFDYVYYSRGSLRLLGVREPLSEERRGQVFGPPWEILPNAWHPSDHLPVVAAFSLR 562          
BLAST of mRNA_H-canaliculatus_F_contig1312.2576.1 vs. uniprot
Match: A0A812M1C2_SYMPI (CCR4 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812M1C2_SYMPI)

HSP 1 Score: 206 bits (524), Expect = 2.110e-56
Identity = 165/574 (28.75%), Postives = 232/574 (40.42%), Query Frame = 1
Query:   79 GITVLSFNVLLPNGNDGWWMYKSY-QPHVPEDHRVWAYRKSLMREYLLSKDADVVCVQEASAETFEDDFDFMKSAGYDCVLHSKF-RFRSATFFKTSRLELACEKHKDRVLLTGLRTLPRVTAADTQTPPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSISDGRLVMVVNCHLTGGPVPERRMRQVFDGLDTARKEAAKLLAAXXXXXXXXXXXXXXXXXXXXXXXXXXKEAASATAGAPAPGTSVPVVVCGDFNSNGRTAVWELLTAGLLEASYRERGYPETA------ITSKDKRQGFGPFGDVYEEAYGGEVHQGGTVLDIGGVGGGTGPPPTFLVPLLHPHFLGEDGEGISARLQVALSEVFNALVAVHGKNHVAGNDEDGGXXXXXXXXXXXXXDGKKSSGDAEKTPFLPREGVEAWLMKINRAVGRGSEFRAAEAIMGPGPGGGLTLEDFYSIYAKELRDGKFWGVAHDLHAL---GVELPGGMPWVGPYAARFDRVFYSKATLEGIGALEPLCEEQMELVVGG--DCLPNSWHPSDHLGVAGAF 1761
            G+T +S+NVLLPN  DGWW+YK Y +PH P  H  W  R+SL+++ +     DV+C+QE S  +FE+DF F++ +GY  +LH K  R R AT +K S  ++A   HKDR L+  LR                                                                   S+  ++ V+N HLT GP  +RR+RQ+ + L+T  KE  K+                                             V V+ CGDFNS G TAV ELL  G++   +RE G P         ITSK ++ G   F D  + A+ G                   PP T L   +    +  DG    A                                                S +AE+   +     E +L +INR +GRGSE R  EA         L+ EDF+++YA EL +GKFWGV HD+  +   G+  P      GP   RFD +++++  L      E L +EQ++ + G   + LPNSWHPSDHL V  +F
Sbjct:   50 GLTCMSYNVLLPNSKDGWWIYKYYREPHGP--HTTWVERQSLLKKQIARIQPDVLCLQEVSELSFEEDFQFLQDSGYTVLLHEKKGRMRPATCWKGSWQQIAAH-HKDRSLIVALR-------------------------------------------------------------------SNELVIFVINVHLTAGPSADRRLRQMHEALETVEKETKKMQLKSD---------------------------------------QVAVLACGDFNSQGCTAVRELLVNGVVNPDFRESGDPTEKGQEGKQITSKIRKHGLSHFQDAADVAFSGR------------------PPATILAQNIDDKMVNSDGSLTGAXXXXXXXXXXACR-----------------------------------SPNAEE---MTGTDTERFLKRINRELGRGSEHRFVEAAFEKRGQRTLSREDFHALYAAELAEGKFWGVEHDMREILGAGLAKP-----EGPCELRFDYIYFTRLKLRS--GEELLSQEQLKKIFGPPWETLPNSWHPSDHLPVIASF 451          
BLAST of mRNA_H-canaliculatus_F_contig1312.2576.1 vs. uniprot
Match: A0A1Q9DED4_SYMMI (Uncharacterized protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9DED4_SYMMI)

HSP 1 Score: 211 bits (536), Expect = 1.700e-54
Identity = 168/574 (29.27%), Postives = 245/574 (42.68%), Query Frame = 1
Query:   76 DGITVLSFNVLLPNGNDGWWMYKSYQP-HVPEDHRVWAYRKSLMREYLLSKDADVVCVQEASAETFEDDFDFMKSAGYDCVLHSKF-RFRSATFFKTSRLELACEKHKDRVLLTGLRTLPRVTAADTQTPPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSISDGRLVMVVNCHLTGGPVPERRMRQVFDGLDTARKEAAKLLAAXXXXXXXXXXXXXXXXXXXXXXXXXXKEAASATAGAPAPGTSVPVVVCGDFNSNGRTAVWELLTAGLLEASYRERGYPETA------ITSKDKRQGFGPFGDVYEEAYGGEVHQGGTVLDIGGVGGGTGPPPTFLVPLLHPHFLGEDGEGISARLQVALSEVFNALVAVHGKNHVAGNDEDGGXXXXXXXXXXXXXDGKKSSGDAEKTPFLPREGVEAWLMKINRAVGRGSEFRAAEAIMGPGPGGGLTLEDFYSIYAKELRDGKFWGVAHDLHALGVELPGGM--PWVGPYAARFDRVFYSKATLEGIGALEPLCEEQMELVVGG--DCLPNSWHPSDHLGVAGAF 1761
            DG + +S+NVLLPN  DGWW+YK Y+  H P  H  W  R++L+ + +     DV+C+QE S  +F++DF F+   GY  ++H K  R R AT +K S  ++  + HKDR L+ GL+                                                                   +   L+ VVN HL+ GP  +RR+RQV + L+T  KEA ++                                      + APG    V+VCGDFNS G TAV ELL  G++   +RE G P         ITSK ++ G   F D  + A+ G                    P T L   +    +  DG  ++  +  AL   F+A  +        GN+                     ++G+ E+           +L +INR +GRGSE R  EA+        L+ EDF+++YA EL +GKFWGV HDL  L   L  G+  P  GP   RFD ++++  +L+  G  E L + +++ + G   + LPNSWHPSDHL V  +F
Sbjct: 1553 DGFSCMSYNVLLPNSKDGWWIYKYYKDSHGP--HTSWPERQALLAQQIARVQPDVLCLQEVSELSFDEDFRFLSEQGYTVLMHEKKGRMRPATCWKASWKQVVAQ-HKDRTLIVGLQ-------------------------------------------------------------------NQALLLFVVNVHLSAGPSADRRLRQVHEALETVEKEAKRM--------------------------------------SKAPG-EFAVLVCGDFNSQGSTAVRELLVNGIVNPDFRESGDPTEKGQEGKQITSKIRKHGLPTFQDAADVAFSGRA------------------PATILAQNIDDKMVNPDGT-LTESMGKALDAAFDACRS--------GNE--------------------MTAGETEQ-----------FLTRINRELGRGSEHRFVEAVFEKRGQRALSREDFHALYAAELAEGKFWGVEHDLREL---LGHGLAKPEDGPCELRFDYIYFTPKSLKLRGVQEMLSKAELQRIYGHPWETLPNSWHPSDHLPVIASF 1956          
BLAST of mRNA_H-canaliculatus_F_contig1312.2576.1 vs. uniprot
Match: A0A813C917_9DINO (Para protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A813C917_9DINO)

HSP 1 Score: 211 bits (536), Expect = 1.720e-54
Identity = 168/574 (29.27%), Postives = 245/574 (42.68%), Query Frame = 1
Query:   76 DGITVLSFNVLLPNGNDGWWMYKSYQP-HVPEDHRVWAYRKSLMREYLLSKDADVVCVQEASAETFEDDFDFMKSAGYDCVLHSKF-RFRSATFFKTSRLELACEKHKDRVLLTGLRTLPRVTAADTQTPPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSISDGRLVMVVNCHLTGGPVPERRMRQVFDGLDTARKEAAKLLAAXXXXXXXXXXXXXXXXXXXXXXXXXXKEAASATAGAPAPGTSVPVVVCGDFNSNGRTAVWELLTAGLLEASYRERGYPETA------ITSKDKRQGFGPFGDVYEEAYGGEVHQGGTVLDIGGVGGGTGPPPTFLVPLLHPHFLGEDGEGISARLQVALSEVFNALVAVHGKNHVAGNDEDGGXXXXXXXXXXXXXDGKKSSGDAEKTPFLPREGVEAWLMKINRAVGRGSEFRAAEAIMGPGPGGGLTLEDFYSIYAKELRDGKFWGVAHDLHALGVELPGGM--PWVGPYAARFDRVFYSKATLEGIGALEPLCEEQMELVVGG--DCLPNSWHPSDHLGVAGAF 1761
            DG + +S+NVLLPN  DGWW+YK Y+  H P  H  W  R++L+ + +     DV+C+QE S  +F++DF F+   GY  ++H K  R R AT +K S  ++  + HKDR L+ GL+                                                                   +   L+ VVN HL+ GP  +RR+RQV + L+T  KEA ++                                      + APG    V+VCGDFNS G TAV ELL  G++   +RE G P         ITSK ++ G   F D  + A+ G                    P T L   +    +  DG  ++  +  AL   F+A  +        GN+                     ++G+ E+           +L +INR +GRGSE R  EA+        L+ EDF+++YA EL +GKFWGV HDL  L   L  G+  P  GP   RFD ++++  +L+  G  E L + +++ + G   + LPNSWHPSDHL V  +F
Sbjct: 1057 DGFSCMSYNVLLPNSKDGWWIYKYYKDSHGP--HTSWPERQALLAQQIARVQPDVLCLQEVSELSFDEDFRFLSEQGYTVLMHEKKGRMRPATCWKASWKQVVAQ-HKDRTLIVGLQ-------------------------------------------------------------------NQALLLFVVNVHLSAGPSADRRLRQVHEALETVEKEAKRM--------------------------------------SKAPG-EFAVLVCGDFNSQGSTAVRELLVNGIVNPDFRESGDPTEKGQEGKQITSKIRKHGLPTFQDAADVAFSGRA------------------PATILAQNIDDKMVNPDGT-LTESMGKALDAAFDACRS--------GNE--------------------MTAGETEQ-----------FLTRINRELGRGSEHRFVEAVFEKRGQRALSREDFHALYAAELAEGKFWGVEHDLREL---LGHGLAKPEDGPCELRFDYIYFTPKSLKLRGVQEMLSKAELQRIYGHPWETLPNSWHPSDHLPVIASF 1460          
BLAST of mRNA_H-canaliculatus_F_contig1312.2576.1 vs. uniprot
Match: A0A812QPD5_9DINO (NaCP60E protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812QPD5_9DINO)

HSP 1 Score: 209 bits (531), Expect = 3.220e-54
Identity = 172/568 (30.28%), Postives = 232/568 (40.85%), Query Frame = 1
Query:   79 GITVLSFNVLLPNGNDGWWMYKSYQPHVPEDHRVWAYRKSLMREYLLSKDADVVCVQEASAETFEDDFDFMKSAGYDCVLHSKF-RFRSATFFKTSRLELACEKHKDRVLLTGLRTLPRVTAADTQTPPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSISDGRLVMVVNCHLTGGPVPERRMRQVFDGLDTARKEAAKLLAAXXXXXXXXXXXXXXXXXXXXXXXXXXKEAASATAGAPAPGTSVPVVVCGDFNSNGRTAVWELLTAGLLEASYRERGYPETA------ITSKDKRQGFGPFGDVYEEAYGGEVHQGGTVLDIGGVGGGTGPPPTFLVPLLHPHFLGEDGEGISARLQVALSEVFNALVAVHGKNHVAGNDEDGGXXXXXXXXXXXXXDGKKSSGDAEKTPFLPREGVEAWLMKINRAVGRGSEFRAAEAIMGPGPGGGLTLEDFYSIYAKELRDGKFWGVAHDLHALGVELPGGM--PWVGPYAARFDRVFYSKATLEGIGALEPLCEEQMELVVGG--DCLPNSWHPSDHLGV 1749
            G T +S+NVLLPN  DGWW+YK Y+ +    H  WA R+ L+ + +     DV+C+QE S  +F++DF F+  AGY  +LH K  R R AT +K +  ++A + HKDR L+ GLR        D +                                                            LV VVN HL+ GP  +RR+RQV + LDT  KEA K+                                             V VV CGDFNS G TAV ELL  G++   +RE G P         +TSK ++     F D  + AY G                    P T L   +    +  DG  ++  +  AL   F+A                                  +S G       +     E +L +INR +GRGSE+R  EA         L+ EDF+S+YA EL +GKFWGV HDL  L   L  GM  P  GP   RFD ++++   LE  G  E L + +++ V G   + LPN WHPSDHL V
Sbjct:   50 GFTCMSYNVLLPNSKDGWWIYKYYR-NSRGTHTSWAERQVLLAKQIARIQPDVLCLQEVSELSFDEDFRFLGEAGYTVLLHEKKGRMRPATCWKGNWKQVAAQ-HKDRSLVVGLR------CEDNE-----------------------------------------------------------ELVFVVNVHLSAGPSADRRLRQVSEALDTVEKEAKKMSLTPD---------------------------------------KVAVVFCGDFNSQGSTAVRELLVNGVVSPDFRESGDPTEKGQEGKQVTSKIRKHNLPNFQDAADLAYSGRA------------------PATILAQNIDHKMVQPDGS-LTQAMSRALDAAFDAC---------------------------------RSPG----AELMSEADTERFLKRINRELGRGSEYRFVEAAFEKRGQRNLSREDFHSLYAAELAEGKFWGVEHDLREL---LGTGMAKPEDGPCELRFDYIYFTPKLLELQGVEEVLSQAELQEVYGPPWETLPNCWHPSDHLPV 452          
BLAST of mRNA_H-canaliculatus_F_contig1312.2576.1 vs. uniprot
Match: R1BIY3_EMIHU (EF-hand domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BIY3_EMIHU)

HSP 1 Score: 199 bits (506), Expect = 1.310e-52
Identity = 189/671 (28.17%), Postives = 255/671 (38.00%), Query Frame = 1
Query:   85 TVLSFNVLLPNGNDGWWMYKSYQPHVPEDHRVWAYRKSLMREYLLSKDADVVCVQEASAETFEDDFDFMKSAGYDCVLHSKFRFRSATFFKTSRLELACEKHKDRVLLTGLRTLPRVTAADTQTPPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSISDGRLVM-VVNCHLTGGPVPERRMRQVFDGLDTARKEAAKLLAAXXXXXXXXXXXXXXXXXXXXXXXXXXKEAASATAGAPAPGTSVPVVVCGDFNSNGRTAVWELLTAGLLEASYRERGYPETAITSKDKRQGFGPFGDVYEEAYGGEVHQGGTVLDIGGVGGGTG-------PPPTFLVPLLHPHFLGEDGEGISARLQVALSEV----------------------------------------------FNALVAVHGKNHVAG--------------NDEDGGXXXXXXXXXXXXXDGKKSSGDAEKTPFLPR-------------------------EGVE----------AWLMKINRAVGRGS------EFRAAEAIMGPGPGGGLTLEDFYSIYAKELRDGKFWGVAHDLHALGVELPGGMPWVGPYAARFDRVFYSKATLEGIGALEPLCEEQMELVV-GGDCLPNSWHPSDHLGVAGAFRF 1767
            ++LS+N+LLPNG D WW  K YQPHVP D R W++R+ L+R+ LL  DAD+VCVQEA+ +TF  DF+F+ + GY+ VLH KFRFR ATF++ S  +L    H+DR L+                                                                     S SD  L + + N HL+GG  P+RR+RQV        +EA+                                +A +A +      +   V++ GDFNS+G TAV  LL  G +E  +RE  Y E  +TSK +R G G F D  E AY   V  G    D G  GG           P T++VP L   FL       S +  VA +E+                                              F+A+ A  G +  A               N E+               D   SSG+A+    + R                         EG E          AWL  INR +GRG+       F  +EA  G      LT   F+ I+A+EL +GK+W  A              P    Y A  D  +Y+  +L   G  E L EEQ   +   GD LPN+WHPSDH+ V   F +
Sbjct:   45 SLLSWNILLPNGEDNWWCEKMYQPHVPHDCRQWSHRQRLIRDRLLLADADIVCVQEAAGDTFASDFEFLHADGYESVLHKKFRFRCATFYRPSAFKLLSVAHEDRALVAKFA-----------------------------------------------------------------SASDPSLALFLANVHLSGGASPDRRLRQVHG---VTEREAS--------------------------------DAEAAASRRKTEASPPRVIITGDFNSDGNTAVRRLLVDGSVEPEWREPQYNEVELTSKPRRHGLGAFADAGEVAYAQNVCDG----DWGDWGGRIDYAHYRERRPATYVVPSLGAAFLERSRRSTSRQQLVADNEMLERLVRSQEGRAPPVAPPRSLSAADLALCDATAGADAPFVAACRRAFDAIDADRGGSLSAAELRQALALLSVLGPNGEEPSAADADAMLSAADTD---SSGEADVESLIARFTAAFRAALDALFDRLAEGPAALGAEGGEELVIPESAALAWLELINRELGRGTYRGAMAAFERSEAATGRRE---LTRRAFHGIFARELGEGKWWQGAAS------------PPRRHYEAWLDYAYYTANSLRLAGYQESLSEEQARRIYKDGDALPNAWHPSDHIPVGCVFEW 593          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1312.2576.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCW2_9PHAE2.290e-24972.24Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A7S1EDE4_HEMAN2.950e-8836.01Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
D8LJ73_ECTSI1.070e-8488.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A813KIP1_POLGL1.670e-7232.88Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A7S4Q6K6_9DINO1.420e-6531.09Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A812M1C2_SYMPI2.110e-5628.75CCR4 protein n=1 Tax=Symbiodinium pilosum TaxID=29... [more]
A0A1Q9DED4_SYMMI1.700e-5429.27Uncharacterized protein n=1 Tax=Symbiodinium micro... [more]
A0A813C917_9DINO1.720e-5429.27Para protein n=2 Tax=Symbiodinium TaxID=2949 RepID... [more]
A0A812QPD5_9DINO3.220e-5430.28NaCP60E protein n=1 Tax=Symbiodinium natans TaxID=... [more]
R1BIY3_EMIHU1.310e-5228.17EF-hand domain-containing protein n=1 Tax=Emiliani... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1312contigH-canaliculatus_F_contig1312:7291..11387 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score203.4
Seed ortholog evalue3e-49
Seed eggNOG ortholog2903.EOD09813
KEGG koko:K18729
EggNOG free text desc.Endonuclease/Exonuclease/phosphatase family
EggNOG OGsCOG5239@1,KOG2338@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03019
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-02_005020.1
Exons7
Model size1773
Cds size1773
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929049.8153093-CDS-H-canaliculatus_F_contig1312:7290..74341622929049.8153093-CDS-H-canaliculatus_F_contig1312:7290..7434Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1312 7291..7434 +
1696845660.4482355-CDS-H-canaliculatus_F_contig1312:7290..74341696845660.4482355-CDS-H-canaliculatus_F_contig1312:7290..7434Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1312 7291..7434 +
1622929049.8329697-CDS-H-canaliculatus_F_contig1312:7853..80111622929049.8329697-CDS-H-canaliculatus_F_contig1312:7853..8011Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1312 7854..8011 +
1696845660.460788-CDS-H-canaliculatus_F_contig1312:7853..80111696845660.460788-CDS-H-canaliculatus_F_contig1312:7853..8011Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1312 7854..8011 +
1622929049.8488417-CDS-H-canaliculatus_F_contig1312:8346..90311622929049.8488417-CDS-H-canaliculatus_F_contig1312:8346..9031Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1312 8347..9031 +
1696845660.4722154-CDS-H-canaliculatus_F_contig1312:8346..90311696845660.4722154-CDS-H-canaliculatus_F_contig1312:8346..9031Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1312 8347..9031 +
1622929049.8663347-CDS-H-canaliculatus_F_contig1312:9354..95601622929049.8663347-CDS-H-canaliculatus_F_contig1312:9354..9560Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1312 9355..9560 +
1696845660.4842386-CDS-H-canaliculatus_F_contig1312:9354..95601696845660.4842386-CDS-H-canaliculatus_F_contig1312:9354..9560Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1312 9355..9560 +
1622929049.883029-CDS-H-canaliculatus_F_contig1312:10008..103011622929049.883029-CDS-H-canaliculatus_F_contig1312:10008..10301Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1312 10009..10301 +
1696845660.4948807-CDS-H-canaliculatus_F_contig1312:10008..103011696845660.4948807-CDS-H-canaliculatus_F_contig1312:10008..10301Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1312 10009..10301 +
1622929049.901899-CDS-H-canaliculatus_F_contig1312:10762..109111622929049.901899-CDS-H-canaliculatus_F_contig1312:10762..10911Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1312 10763..10911 +
1696845660.504018-CDS-H-canaliculatus_F_contig1312:10762..109111696845660.504018-CDS-H-canaliculatus_F_contig1312:10762..10911Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1312 10763..10911 +
1622929049.9232442-CDS-H-canaliculatus_F_contig1312:11249..113871622929049.9232442-CDS-H-canaliculatus_F_contig1312:11249..11387Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1312 11250..11387 +
1696845660.5119545-CDS-H-canaliculatus_F_contig1312:11249..113871696845660.5119545-CDS-H-canaliculatus_F_contig1312:11249..11387Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1312 11250..11387 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1312.2576.1prot_H-canaliculatus_F_contig1312.2576.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1312 7291..11387 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1312.2576.1

>prot_H-canaliculatus_F_contig1312.2576.1 ID=prot_H-canaliculatus_F_contig1312.2576.1|Name=mRNA_H-canaliculatus_F_contig1312.2576.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=591bp
MSTAVAGEAAAAAILPANAPLPLLDDGITVLSFNVLLPNGNDGWWMYKSY
QPHVPEDHRVWAYRKSLMREYLLSKDADVVCVQEASAETFEDDFDFMKSA
GYDCVLHSKFRFRSATFFKTSRLELACEKHKDRVLLTGLRTLPRVTAADT
QTPPSPPPPPPSPPISPTAIPAATAAAAAPAATEATRESLEGAAKGSSDS
DRGSDSISDGRLVMVVNCHLTGGPVPERRMRQVFDGLDTARKEAAKLLAA
AQARNSKGNKKSGGGGGGGGGGKKGGKEAASATAGAPAPGTSVPVVVCGD
FNSNGRTAVWELLTAGLLEASYRERGYPETAITSKDKRQGFGPFGDVYEE
AYGGEVHQGGTVLDIGGVGGGTGPPPTFLVPLLHPHFLGEDGEGISARLQ
VALSEVFNALVAVHGKNHVAGNDEDGGASAATATAAAAAADGKKSSGDAE
KTPFLPREGVEAWLMKINRAVGRGSEFRAAEAIMGPGPGGGLTLEDFYSI
YAKELRDGKFWGVAHDLHALGVELPGGMPWVGPYAARFDRVFYSKATLEG
IGALEPLCEEQMELVVGGDCLPNSWHPSDHLGVAGAFRFR*
back to top

mRNA from alignment at H-canaliculatus_F_contig1312:7291..11387+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1312.2576.1 ID=mRNA_H-canaliculatus_F_contig1312.2576.1|Name=mRNA_H-canaliculatus_F_contig1312.2576.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4097bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1312:7291..11387+ (Hapterophycus canaliculatus Oshoro5f female)
ATGTCGACAGCAGTTGCGGGGGAAGCAGCAGCTGCAGCTATCCTTCCCGC CAACGCTCCGCTGCCGCTCCTGGACGACGGCATCACGGTGCTGTCTTTTA ACGTGTTGCTCCCGAATGGTAATGACGGCTGGTGGATGTACAAGGTACGC TTGCCTGAGCCAGAAGACGAAACATCGAGACACATCGTACAATGATAGGC AAGGTTCCGTGTGTGCTCACGGGACTGTCAGCTGCGGCGCTCCTATTTCT GATTTCTACGACAGATACTCCCAGCAGAGATACAGCAGAGATACAGTACA TCTCCAGGGTATGTCAGCATGCAGAAATCGTATTTCTGGATGTCACCCCC ACGGATGGTGCTGCGTTGAAAAGAAGGATTTCTACTACTGTTGAGTTGTT CGTATCCTCTCTTGCCGAAATCCACAAAATCTGTCAAGACCTTGAGGGAT TTTACTGCCGTCCCTTCAAGATATCGTGCTTGTACTCCGATTACATGACC GTAACTTGATCAGATGATACCAGTCTCCGAGCGTTTTCTCTCTACCCCCC TGCCGTTGCGCAGAGCTACCAGCCGCACGTCCCCGAGGACCACAGGGTGT GGGCCTACCGAAAGTCCCTCATGCGGGAGTACCTGCTGAGCAAGGATGCC GATGTAGTATGCGTGCAGGAAGCCTCGGCCGAAACCTTCGAGGATGACTT CGACTTCATGAAAAGCGCCGGGTGAGAGCGAGCTGGTCGCTGTTTTCATG TTACATCAGGGCTGTCGTTGCTGCTCCCGCTATCGTTGTTGTCGCTGTCT CTGTGACCGTTTCGCTGCCGGTTGTGCGGAAAATCTGAAGACGCCGGTGC AATGTATGAGCGAAAACATGGCCGATGTTCTAGTCTGGCTGATGGCTTTC CACTCTCTCGCACCCTCTCTCTCGTCCTCTCCCTCTTCCGCTCCCTCGTC CTTCTCTCTCCCCCTGCCTCTCTCTCTCACCCCTGCCAATGCATGTCCGC AAACCACACCGATCAAACCGGACCGAAAACAACGGACGATGGGACACATG CTTCAGGTACGACTGTGTGCTGCACTCCAAGTTTCGCTTTCGCTCGGCCA CGTTTTTCAAGACCTCGAGGCTGGAGCTGGCGTGCGAGAAGCACAAGGAT AGAGTGCTGCTAACGGGCCTTCGAACCCTGCCCCGAGTGACAGCCGCGGA TACGCAAACACCGCCCTCGCCACCTCCCCCGCCGCCGTCGCCGCCAATAT CTCCCACGGCGATTCCGGCGGCAACGGCGGCAGCGGCTGCGCCCGCTGCA ACAGAAGCCACTCGAGAGAGTCTTGAGGGTGCGGCGAAAGGGTCGAGCGA CAGCGACCGAGGCAGCGATAGCATTAGCGATGGGCGGCTAGTGATGGTGG TTAACTGCCACCTGACGGGAGGACCCGTGCCCGAGCGGCGTATGCGGCAG GTCTTCGACGGCCTTGATACGGCTCGAAAGGAAGCCGCCAAATTACTGGC GGCAGCACAGGCGAGGAATTCGAAGGGGAACAAGAAGAGTGGTGGGGGTG GTGGCGGCGGCGGCGGCGGAAAGAAAGGGGGGAAGGAGGCAGCAAGCGCC ACTGCTGGGGCACCTGCCCCAGGAACGTCGGTTCCCGTGGTTGTGTGCGG GGATTTCAACAGCAACGGTCGAACGGCCGTGTGGGAGTTGTTGACGGCTG GACTTTTGGAGGCGTCGTATCGTGAACGGGGTTACCCGGAGGTGAGGGGT AGTTGTAGCATGGTGGAGGCAAGCTTTACTTTTGGTTGTTGCCGATCGGG ATTGATTGCTGCTGCGGCGGCGGCTGCGTTTCTCGAAGCTCACGTTGTTG GTTCGGGCCTGTGCTCCGCGAGGTAGACACAGGACGTGCACATCATGGAG ATTTTGTTGTCGTTATTCTTTGCAGCTCGAATGGCTCGAATCGATTTAGA CGCGAAACGATCCTGTTCGCTCTCCCCAAAAAACGCTATCAATGGTACTC TTCCGTAAGCCCATTTCGTAGACACGTTTTGCTTCGTTCTTCCCACACGT CCCTCGACAACCAGACGGCCATTACCTCCAAGGACAAGCGACAAGGATTC GGGCCTTTCGGCGACGTCTACGAGGAGGCCTACGGGGGTGAAGTCCACCA GGGGGGGACTGTCTTGGACATTGGCGGTGTGGGCGGAGGAACCGGTCCCC CGCCGACATTTCTGGTGCCTCTTCTGCACCCACACTTTCTCGGCGAGGAC GGAGAAGGTATCTCCGCCAGGTGAAGAGATTTGAAGTGCGGGCATGTTGT GGCATGCCGGAGGGTAGGAGGGGGGTCGGGGGTGCGGGTGTTGACGACCT TGTAGTCGATTGATGAAACCGTTGAGAGCATGAACACCAGCCATTCAAGT TGTCTGCCGGTGCGGTCTCCATCTAATGCGCACTCCTTTAGTGGATGCAT GAGTGCACTGCTGCTTCTCGCAACGCCCTTTCCATCTCTCCCCCGTTGCA CAAAATACTTGCACCTGCTGACTATCATGATGTCCATTTCCTGCCCAGGA CGGTTGTGGTTCCTACGAAGATACTACAGACACGACCTCATGCAAATGCG GCAAGGGAGCTCCTGAGATTATTTCTGTACCACCGCAACCCCCAAACCAG CATGGTTATGTTTTTCTTTGTTGACGCTCCCCGCCTTCTCTCTCTCTCTG GCGGACCCCGTCAATCAGACTCCAGGTGGCACTGTCAGAGGTGTTCAACG CCTTGGTCGCGGTGCACGGCAAGAATCATGTGGCGGGAAACGACGAGGAT GGCGGAGCGTCCGCCGCAACGGCAACAGCAGCAGCGGCAGCGGCAGACGG GAAGAAGTCTTCAGGCGACGCGGAAAAGACGCCGTTCCTTCCTCGAGAGG GGGTCGAAGCCTGGTTAATGAAAATCAACAGGGCGGTTGGGAGGGGCAGC GAGTTTCGAGCCGCGGAGGCAATCATGGGACCGGGGCCAGGCGGCGGGCT CACGCTGGAAGGTGACGTAGGGGGACGGACAAAGGGGAGAGTCACGTGTC GTGTGAAGCGGCGGCGTGTGTTTGTCTCGTGTGCGTTGCGTTGCTGACGC CCTATTTTCTGTGTTTTTGCCGCTTGGCTTAGAACGTCTCTTTAGGAACG GCGGTCGCGTATGAAGGTGAGGAGACTGCTGGTCTGTCTGTCTCAAGATA CGCAAACAACCGAGTCGAACAAGCAAATGGTGTGTGTATGTGTCGTGTGG CTGTCAAGGGACTTTGAAAGGGGTCCGTTCCGATGGCACGGCCCTCGTGC TCCAGGCTTCGGCTCTCTCTCTCTCTTGCCCTCTGGGTGTGAATTTTTTT TTCGCGTGGCTCCATCTGCAACCACTTGCGGAAGTTTTCTGAACAGCAGT AGCGCATGCAACTTACTGCCAAGCCTGTTGTGTCACTGTTTCGTGTGTGA ACGGCATGCGTACGGTCGGCAGACTTCTACTCAATTTACGCCAAGGAGCT ACGGGACGGCAAATTCTGGGGCGTTGCCCACGATCTGCACGCCCTGGGAG TAGAACTTCCCGGAGGGATGCCGTGGGTGGGTCCGTATGCGGCACGCTTC GACCGCGTCTTTTACTCCAAGGTGCGCCACCGATGAGGCTCACTGTTTCG CCGTTCTTGTTCTTGTTCTTGTTGTTATTATTATTTTTGTTGTTTTTGGT GATGTTTTCGTCGTCGTCGTTGTCGTTGTCGTCGTCGTCGCTGTCGTGCC ATCCTTGAGCACCTGTAGAGTTCCCGCCTTCCAGCCGCTGTACGATCATA CACAGGCAGTCCTGACGCATGAAGCAGACGAAAATGCGCTTTCACCAGCA CAACTATCGCGTGAGAGATCTGCCTTTGCCCTCGCGTCACTCCTATGAGC ACCTCCGTCTACTTTCCTGTGATCGTTGTCCTTCGCGTGCGGCAAACGCG ATGTTGTAGGCGACGCTCGAGGGTATCGGAGCCTTGGAGCCCCTCTGCGA GGAACAGATGGAGCTAGTCGTAGGGGGCGACTGCTTACCGAACTCTTGGC ACCCCTCGGACCATTTGGGGGTTGCAGGGGCCTTTCGGTTTCGATAG
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1312:7291..11387+

>mRNA_H-canaliculatus_F_contig1312.2576.1 ID=mRNA_H-canaliculatus_F_contig1312.2576.1|Name=mRNA_H-canaliculatus_F_contig1312.2576.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3546bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1312:7291..11387+ (Hapterophycus canaliculatus Oshoro5f female)
ATGTCGACAGCAGTTGCGGGGGAAGCAGCAGCTGCAGCTATCCTTCCCGC
CAACGCTCCGCTGCCGCTCCTGGACGACGGCATCACGGTGCTGTCTTTTA
ACGTGTTGCTCCCGAATGGTAATGACGGCTGGTGGATGTACAAGATGTCG
ACAGCAGTTGCGGGGGAAGCAGCAGCTGCAGCTATCCTTCCCGCCAACGC
TCCGCTGCCGCTCCTGGACGACGGCATCACGGTGCTGTCTTTTAACGTGT
TGCTCCCGAATGGTAATGACGGCTGGTGGATGTACAAGAGCTACCAGCCG
CACGTCCCCGAGGACCACAGGGTGTGGGCCTACCGAAAGTCCCTCATGCG
GGAGTACCTGCTGAGCAAGGATGCCGATGTAGTATGCGTGCAGGAAGCCT
CGGCCGAAACCTTCGAGGATGACTTCGACTTCATGAAAAGCGCCGGAGCT
ACCAGCCGCACGTCCCCGAGGACCACAGGGTGTGGGCCTACCGAAAGTCC
CTCATGCGGGAGTACCTGCTGAGCAAGGATGCCGATGTAGTATGCGTGCA
GGAAGCCTCGGCCGAAACCTTCGAGGATGACTTCGACTTCATGAAAAGCG
CCGGGTACGACTGTGTGCTGCACTCCAAGTTTCGCTTTCGCTCGGCCACG
TTTTTCAAGACCTCGAGGCTGGAGCTGGCGTGCGAGAAGCACAAGGATAG
AGTGCTGCTAACGGGCCTTCGAACCCTGCCCCGAGTGACAGCCGCGGATA
CGCAAACACCGCCCTCGCCACCTCCCCCGCCGCCGTCGCCGCCAATATCT
CCCACGGCGATTCCGGCGGCAACGGCGGCAGCGGCTGCGCCCGCTGCAAC
AGAAGCCACTCGAGAGAGTCTTGAGGGTGCGGCGAAAGGGTCGAGCGACA
GCGACCGAGGCAGCGATAGCATTAGCGATGGGCGGCTAGTGATGGTGGTT
AACTGCCACCTGACGGGAGGACCCGTGCCCGAGCGGCGTATGCGGCAGGT
CTTCGACGGCCTTGATACGGCTCGAAAGGAAGCCGCCAAATTACTGGCGG
CAGCACAGGCGAGGAATTCGAAGGGGAACAAGAAGAGTGGTGGGGGTGGT
GGCGGCGGCGGCGGCGGAAAGAAAGGGGGGAAGGAGGCAGCAAGCGCCAC
TGCTGGGGCACCTGCCCCAGGAACGTCGGTTCCCGTGGTTGTGTGCGGGG
ATTTCAACAGCAACGGTCGAACGGCCGTGTGGGAGTTGTTGACGGCTGGA
CTTTTGGAGGCGTCGTATCGTGAACGGGGTTACCCGGAGGTACGACTGTG
TGCTGCACTCCAAGTTTCGCTTTCGCTCGGCCACGTTTTTCAAGACCTCG
AGGCTGGAGCTGGCGTGCGAGAAGCACAAGGATAGAGTGCTGCTAACGGG
CCTTCGAACCCTGCCCCGAGTGACAGCCGCGGATACGCAAACACCGCCCT
CGCCACCTCCCCCGCCGCCGTCGCCGCCAATATCTCCCACGGCGATTCCG
GCGGCAACGGCGGCAGCGGCTGCGCCCGCTGCAACAGAAGCCACTCGAGA
GAGTCTTGAGGGTGCGGCGAAAGGGTCGAGCGACAGCGACCGAGGCAGCG
ATAGCATTAGCGATGGGCGGCTAGTGATGGTGGTTAACTGCCACCTGACG
GGAGGACCCGTGCCCGAGCGGCGTATGCGGCAGGTCTTCGACGGCCTTGA
TACGGCTCGAAAGGAAGCCGCCAAATTACTGGCGGCAGCACAGGCGAGGA
ATTCGAAGGGGAACAAGAAGAGTGGTGGGGGTGGTGGCGGCGGCGGCGGC
GGAAAGAAAGGGGGGAAGGAGGCAGCAAGCGCCACTGCTGGGGCACCTGC
CCCAGGAACGTCGGTTCCCGTGGTTGTGTGCGGGGATTTCAACAGCAACG
GTCGAACGGCCGTGTGGGAGTTGTTGACGGCTGGACTTTTGGAGGCGTCG
TATCGTGAACGGGGTTACCCGGAGACGGCCATTACCTCCAAGGACAAGCG
ACAAGGATTCGGGCCTTTCGGCGACGTCTACGAGGAGGCCTACGGGGGTG
AAGTCCACCAGGGGGGGACTGTCTTGGACATTGGCGGTGTGGGCGGAGGA
ACCGGTCCCCCGCCGACATTTCTGGTGCCTCTTCTGCACCCACACTTTCT
CGGCGAGGACGGAGAAGGTATCTCCGCCAGACGGCCATTACCTCCAAGGA
CAAGCGACAAGGATTCGGGCCTTTCGGCGACGTCTACGAGGAGGCCTACG
GGGGTGAAGTCCACCAGGGGGGGACTGTCTTGGACATTGGCGGTGTGGGC
GGAGGAACCGGTCCCCCGCCGACATTTCTGGTGCCTCTTCTGCACCCACA
CTTTCTCGGCGAGGACGGAGAAGGTATCTCCGCCAGACTCCAGGTGGCAC
TGTCAGAGGTGTTCAACGCCTTGGTCGCGGTGCACGGCAAGAATCATGTG
GCGGGAAACGACGAGGATGGCGGAGCGTCCGCCGCAACGGCAACAGCAGC
AGCGGCAGCGGCAGACGGGAAGAAGTCTTCAGGCGACGCGGAAAAGACGC
CGTTCCTTCCTCGAGAGGGGGTCGAAGCCTGGTTAATGAAAATCAACAGG
GCGGTTGGGAGGGGCAGCGAGTTTCGAGCCGCGGAGGCAATCATGGGACC
GGGGCCAGGCGGCGGGCTCACGCTGGAAGACTCCAGGTGGCACTGTCAGA
GGTGTTCAACGCCTTGGTCGCGGTGCACGGCAAGAATCATGTGGCGGGAA
ACGACGAGGATGGCGGAGCGTCCGCCGCAACGGCAACAGCAGCAGCGGCA
GCGGCAGACGGGAAGAAGTCTTCAGGCGACGCGGAAAAGACGCCGTTCCT
TCCTCGAGAGGGGGTCGAAGCCTGGTTAATGAAAATCAACAGGGCGGTTG
GGAGGGGCAGCGAGTTTCGAGCCGCGGAGGCAATCATGGGACCGGGGCCA
GGCGGCGGGCTCACGCTGGAAGACTTCTACTCAATTTACGCCAAGGAGCT
ACGGGACGGCAAATTCTGGGGCGTTGCCCACGATCTGCACGCCCTGGGAG
TAGAACTTCCCGGAGGGATGCCGTGGGTGGGTCCGTATGCGGCACGCTTC
GACCGCGTCTTTTACTCCAAGACTTCTACTCAATTTACGCCAAGGAGCTA
CGGGACGGCAAATTCTGGGGCGTTGCCCACGATCTGCACGCCCTGGGAGT
AGAACTTCCCGGAGGGATGCCGTGGGTGGGTCCGTATGCGGCACGCTTCG
ACCGCGTCTTTTACTCCAAGGCGACGCTCGAGGGTATCGGAGCCTTGGAG
CCCCTCTGCGAGGAACAGATGGAGCTAGTCGTAGGGGGCGACTGCTTACC
GAACTCTTGGCACCCCTCGGACCATTTGGGGGTTGCAGGGGCCTTTCGGT
TTCGATAGGCGACGCTCGAGGGTATCGGAGCCTTGGAGCCCCTCTGCGAG
GAACAGATGGAGCTAGTCGTAGGGGGCGACTGCTTACCGAACTCTTGGCA
CCCCTCGGACCATTTGGGGGTTGCAGGGGCCTTTCGGTTTCGATAG
back to top