mRNA_H-canaliculatus_F_contig12900.2423.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12900.2423.1 vs. uniprot
Match: A0A6H5K7E8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7E8_9PHAE) HSP 1 Score: 453 bits (1166), Expect = 1.100e-146 Identity = 253/271 (93.36%), Postives = 256/271 (94.46%), Query Frame = 1
Query: 4 GANAYWETVEKHVAAQDYTPLLGLVAELRDKIIGLTPRRRDLAAETCEAMDVELLEQMMDYGAFDVGCFFRMVAFAGERVLELEAPIRNDGTKATLAGWGRTQDEVEGGRRRLEPAMVRECFEYLFSKTDEIHVDILNAHLQFVTPFLKQHGVEYERDRFTEKLDAGEVSLDMTHLWLHRAIRQLRTAAGVAALPPXXXXXXXXXXXXXXXXXXXXXXXXXXXPEVLFYRQLLKDLEQRRGDAYLKLLRVAIVDNLLGSIVCVERKVGSSA 816
G NAYW TVE HVAA+DYTPLLGLVAELRDKIIGLTPRRRDLAAETCEAMDVELLEQMMDYGAFDVGCFFRMVAFAGERVLELEAPIRND TKATLA WGRTQDEVEGGRRRLEPAMVRECFEYLFSKTDEIHVDILNAHLQFVTPFLKQHGVEYERDRFTEKLD GE SLDMTHLWLHRAIRQLR+AAGVAA P XXXXXXXXXXXXXXXXXXXXXXX PEV FYR+LL DLEQRRGDAYLKLLRVAIVDNLLGSIVCVERKVGSSA
Sbjct: 776 GVNAYWSTVESHVAAEDYTPLLGLVAELRDKIIGLTPRRRDLAAETCEAMDVELLEQMMDYGAFDVGCFFRMVAFAGERVLELEAPIRNDDTKATLAEWGRTQDEVEGGRRRLEPAMVRECFEYLFSKTDEIHVDILNAHLQFVTPFLKQHGVEYERDRFTEKLDVGETSLDMTHLWLHRAIRQLRSAAGVAATPTAXXXXXXXXXXXXXXXXXXXXXXXAASPEVRFYRELLSDLEQRRGDAYLKLLRVAIVDNLLGSIVCVERKVGSSA 1046
BLAST of mRNA_H-canaliculatus_F_contig12900.2423.1 vs. uniprot
Match: D8LHM9_ECTSI (T-complex 11 (Mouse) like 2, isoform CRA_a (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHM9_ECTSI) HSP 1 Score: 382 bits (981), Expect = 2.880e-122 Identity = 186/196 (94.90%), Postives = 188/196 (95.92%), Query Frame = 1
Query: 4 GANAYWETVEKHVAAQDYTPLLGLVAELRDKIIGLTPRRRDLAAETCEAMDVELLEQMMDYGAFDVGCFFRMVAFAGERVLELEAPIRNDGTKATLAGWGRTQDEVEGGRRRLEPAMVRECFEYLFSKTDEIHVDILNAHLQFVTPFLKQHGVEYERDRFTEKLDAGEVSLDMTHLWLHRAIRQLRTAAGVAALPP 591
G NAYW TVE HVAA+DYTPLLGLVAELRDKIIGLTPRRRDLAAETCEAMDVELLEQMMDYGAFDVGCFFRMVAFAGERVLELEAPIRND TKATLAGWGRTQDEVEGGRRRLEPAMVRECFEYLFSKTDEIHVDILNAHLQFVTPFLKQHGVEYERDRFTEKLD GE SLDMTHLWLHRAIRQLR+AAGVAA P
Sbjct: 780 GVNAYWSTVESHVAAEDYTPLLGLVAELRDKIIGLTPRRRDLAAETCEAMDVELLEQMMDYGAFDVGCFFRMVAFAGERVLELEAPIRNDDTKATLAGWGRTQDEVEGGRRRLEPAMVRECFEYLFSKTDEIHVDILNAHLQFVTPFLKQHGVEYERDRFTEKLDVGETSLDMTHLWLHRAIRQLRSAAGVAATHP 975
BLAST of mRNA_H-canaliculatus_F_contig12900.2423.1 vs. uniprot
Match: A0A835Z8D6_9STRA (T-complex protein 11-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8D6_9STRA) HSP 1 Score: 126 bits (317), Expect = 7.290e-29 Identity = 67/167 (40.12%), Postives = 96/167 (57.49%), Query Frame = 1
Query: 82 ELRDKIIGLTPRRRDLAAETCEAMDVELLEQMMDYGAFDVGCFFRMVAFAGERVLELEAPIRNDGTKATLAGWGRTQDEVEGGRRRLEPA----MVRECFEYLFSKTDEIHVDILNAHLQFVTPFLKQHGVEYERDRFTEKLDAGEVSLDMTHLWLHRAIRQLRTAA 570
E+ K+ LTP R DL AET A+D LL QM GA D ++ F G+R++ L+AP R T+A L R D++ +P ++ FE++F++ DE+ D NAH+ + P+L+QHGVEYERD+F E+L AGEV+L+ T WL +R L A
Sbjct: 595 EVSAKLCALTPSRADLNAETRAALDASLLGQMAAQGALDSTTMANLIRFIGQRIMALQAPARVPATQAWLQ---RFNDDMAAAASSGDPGAPVRLLPRIFEFVFARIDEVRQDAANAHVAVLVPYLQQHGVEYERDKFNERLSAGEVTLERTKAWLSSTVRALPQGA 758
BLAST of mRNA_H-canaliculatus_F_contig12900.2423.1 vs. uniprot
Match: K8YQD2_NANGC (T-complex 11 like isoform cra b n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YQD2_NANGC) HSP 1 Score: 108 bits (270), Expect = 1.150e-22 Identity = 59/187 (31.55%), Postives = 101/187 (54.01%), Query Frame = 1
Query: 52 DYTPLLGLVAELRDKIIGLTPRRRDLAAETCEAMDVELLEQMMDYGAFDVGCFFRMVAFAGERVLELEAPIRNDGTKATLAGWGRTQDEVEGGRRRLEPA---------MVRECFEYLFSKTDEIHVDILNAHLQFVTPFLKQHGVEYERDRFTEKLDAGEVSLDMTHLWLHRAIRQLRTAAGVAAL 585
+Y P L LV E+R+K+ LTPRR DLA E +D +LL QM G D ++++ + + ++ L+AP+R T + ++G+ + EV + A ++ F +F++ DE DI +AH+Q + P+L QHGVEYER++F + G+ L T WL + + A+ ++++
Sbjct: 559 EYEPFLALVDEVREKLTSLTPRRIDLAEELRAHLDKKLLSQMALQGLLDAPAIYKLLKYIFDHLMALQAPVRVAETMSWISGF---EKEVHASMSASQHAKYIPSAFVALLPRVFRGIFARIDETQRDIADAHIQMLRPYLVQHGVEYEREKFAARFLTGQWRLLNTEAWLKKVLASPENASHLSSI 742
BLAST of mRNA_H-canaliculatus_F_contig12900.2423.1 vs. uniprot
Match: A0A7S3V2N3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V2N3_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.250e-15 Identity = 45/152 (29.61%), Postives = 83/152 (54.61%), Query Frame = 1
Query: 55 YTPLLGLVAELRDKIIGLTPRRRDLAAETCEAMDVELLEQMMDYGAFDVGCFFRMVAFAGERVLELEAPIRNDGTKATLAGWGRTQDEVEGGRRRLEPAMVRECFEYLFSKTDEIHVDILNAHLQFVTPFLK-QHGVEYERDRFTEKLDAGE 507
Y L+ ++ +R+++I LTP R DL + +A+D L+ Q + AFD F +++F G+R++ L+AP RN+ T L + L PA V Y ++ +I +D+ N HL + ++ ++G++Y+R F +K+++GE
Sbjct: 476 YEKLVAVLINIRERLIQLTPNRTDLKNQLNDAIDESLIRQQLKEKAFDKKSLFNIISFLGQRIINLQAPARNEDTNMWLKKLNEAHMDASNDWETLTPAAVN----YALNEIAKIELDMANFHLSVLGQHVQGENGIKYQRATFEKKINSGE 623
BLAST of mRNA_H-canaliculatus_F_contig12900.2423.1 vs. uniprot
Match: A0A2R5G1C0_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G1C0_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.220e-12 Identity = 55/184 (29.89%), Postives = 85/184 (46.20%), Query Frame = 1
Query: 43 AAQDYTPLLGLVAELRDKIIGLTPRRRDLAAETCEAMDVELLEQMMDYGAFDVGCFFRMVAFAGERVLELEAPIRNDGTKATLAGWGRTQDEVEGGRRRLEPAMVRECFEYLFSKTDEIHVDILNAHLQFVTPFLKQ-HGVEYERDRFTEKLDAGE-------VSLDMTHLWLHRAIRQLRTAA 570
AA L +VAE+ ++ LTP R DL + E +D ELL Q + AF+ + +V F GER+L L+APIR + T++ L E RR+ + F+++ + I D+ N HL+ + + G Y R+ F +L GE V T W A+ + T+A
Sbjct: 571 AAMPKDMLPSIVAEVCSRLAALTPNRADLIRQLEERLDTELLAQQVRENAFNQADLYSLVQFIGERLLALQAPIRQERTESWLMDLHVAAQE----RRKSWQDLAPRAFDFVLRELAAIETDMANFHLKVLRDNVSHDQGAAYLREHFIGRLRQGEYRKGPLAVGPHRTEAWFASALASVETSA 750
BLAST of mRNA_H-canaliculatus_F_contig12900.2423.1 vs. uniprot
Match: A0A7S1G3J8_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G3J8_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 3.990e-12 Identity = 52/171 (30.41%), Postives = 77/171 (45.03%), Query Frame = 1
Query: 76 VAELRDKIIGLTPRRRDLAAETCEAMDVELLEQMMDYGAFDVGCFFRMVAFAGERVLELEAPIRNDGTKATLAGWGRTQDEVEGGRRRLEPAMVRECFEYLFSKTDEIHVDILNAHLQFVTPFLKQ--HGVEYERDRFTEKLDAGEVSLDMTHLWLHRAIRQLRTAAGVAA 582
+A ++ IIG+TPRR DLA+E A+D + + ++ + + R+ LEAP R T+A + G A V + F + D + D N HL + P+L + G EYER +F E+L G SL WL + +LR AA AA
Sbjct: 403 LAAIKAGIIGVTPRRPDLASEVTAAVDEDHIAMLVARRVLTGRALATLAGWLATRIASLEAPARAVDTRAWADDAAAALSAL--GDAAAPRAAVARVLAWCFLRLDVLRADAANFHLSTLAPYLTRGRKGAEYERRQFEERLREGATSLVGAAAWLRDTVDELRAAADAAA 571
BLAST of mRNA_H-canaliculatus_F_contig12900.2423.1 vs. uniprot
Match: A0A3G4ZWQ3_9VIRU (Uncharacterized protein n=1 Tax=Edafosvirus sp. TaxID=2487765 RepID=A0A3G4ZWQ3_9VIRU) HSP 1 Score: 73.9 bits (180), Expect = 3.540e-11 Identity = 42/139 (30.22%), Postives = 73/139 (52.52%), Query Frame = 1
Query: 13 AYWETVEKHVAAQDYTPLLGLVAELRDKIIGLTPRRRDLAAETCEAMDVELLEQMMDYGAFDVGCFFRMVAFAGERVLELEAPIRNDGT-KATLAGWGRTQDEVEGGRRRLEPAMVRECFEYLFSKTDEIHVDILNAHL 426
+YW +E+ +A Y L+ ++AE++ +++ L P E E++D EL+EQM+ AFD R + +++EL+APIRND T K + R Q+ GG + +++ Y+ EI I+N+H+
Sbjct: 264 SYWNVLEEDIAIGKYVVLMKILAEIKAELLNLRPNNVKYKEELDESLDFELMEQMIKNKAFDFKSLIRYAEYIIHKLIELQAPIRNDDTRKKWVEMLARMQNGDVGGFDKCATFIIK----YIMELIQEIKDAIINSHI 398
BLAST of mRNA_H-canaliculatus_F_contig12900.2423.1 vs. uniprot
Match: A0A167R7N3_PHYB8 (Uncharacterized protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167R7N3_PHYB8) HSP 1 Score: 74.3 bits (181), Expect = 4.110e-11 Identity = 50/182 (27.47%), Postives = 95/182 (52.20%), Query Frame = 1
Query: 13 AYWETVEKHVAAQDYTPLLGLVAELRDKIIGLTPRRRDLAAETCEAMDVELLEQMMDYGAFDVGCFFRMVAFAGERVLELEAPIRNDGTKATLAGWGRTQDEVEGGRRRLEPAMVRECFEYLFSKTDEIHVDILNAHLQFVTPFLKQHGVEYERDRFTEKLDAGEVSLDMTHLWLHRAIRQL 558
A+++ +E + D + L GL+A++R++++GL+P DL E MD+EL++Q DV + + + A + +L AP+R++ A G +Q V+ +++ E L D + +D+ N L + P L + GVEYE+D F + + + + +T++WL +A +L
Sbjct: 464 AFFDKLENELDNGDTSSLPGLLADVRERLLGLSPLDGDLRETILEIMDIELIQQQAANNTLDVSKYIQTIIDA---IAQLCAPVRDEAIAAIREG---SQPIVQ----------IQQLLELL----DFMALDLANFKLAAIRPHLVEIGVEYEQDFFAKTI-SNNPEMPITNIWLCKAFHRL 624
BLAST of mRNA_H-canaliculatus_F_contig12900.2423.1 vs. uniprot
Match: A0A1I8HVS1_9PLAT (Uncharacterized protein n=4 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8HVS1_9PLAT) HSP 1 Score: 70.5 bits (171), Expect = 6.570e-10 Identity = 50/191 (26.18%), Postives = 94/191 (49.21%), Query Frame = 1
Query: 13 AYWETVEKHVAAQ--DYTPLLGLVAELRDKIIGLTPRRRDLAAETCEAMDVELLEQMMDYGAFDVGCFFRMVAFAGERVLELEAPIRNDGTKATLAGWGRTQDEVEGGRRRLEPAMVRECFEYLFSKTDEIHVDILNAHLQFVTPFLKQHGVEYERDRFTEKLDA----GEVSLDMTHLWLHRAIRQLRTA 567
A+W+ + +++A DY+ + L+ E++ ++ L P + E +D+EL+ Q +++GAFD+ + V + + ++ AP R++ +A A Q+ V A+ RE F L D + +D+ N +Q + P+++Q V YER++F + L + G L T WL + L A
Sbjct: 156 AFWDVLTENLAKTPPDYSQAVTLIGEIKTILLSLLPNNERARQQIEEVLDLELIRQKVEHGAFDINYYSNYVL---DLMGKMCAPARDEAIRACAA----IQEPV---------ALFRELFRLL----DLMKLDMANFTMQQMRPYIRQQAVTYEREKFEQLLASQAAVGVDGLRRTRAWLSESAAALPAA 326 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12900.2423.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12900.2423.1 >prot_H-canaliculatus_F_contig12900.2423.1 ID=prot_H-canaliculatus_F_contig12900.2423.1|Name=mRNA_H-canaliculatus_F_contig12900.2423.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=300bp GGANAYWETVEKHVAAQDYTPLLGLVAELRDKIIGLTPRRRDLAAETCEAback to top mRNA from alignment at H-canaliculatus_F_contig12900:145..2336+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12900.2423.1 ID=mRNA_H-canaliculatus_F_contig12900.2423.1|Name=mRNA_H-canaliculatus_F_contig12900.2423.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2192bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12900:145..2336+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12900:145..2336+ >mRNA_H-canaliculatus_F_contig12900.2423.1 ID=mRNA_H-canaliculatus_F_contig12900.2423.1|Name=mRNA_H-canaliculatus_F_contig12900.2423.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1800bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12900:145..2336+ (Hapterophycus canaliculatus Oshoro5f female)back to top |