mRNA_H-canaliculatus_F_contig12899.2415.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12899.2415.1 vs. uniprot
Match: A0A6H5JRV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRV8_9PHAE) HSP 1 Score: 105 bits (262), Expect = 9.820e-24 Identity = 55/137 (40.15%), Postives = 81/137 (59.12%), Query Frame = 1
Query: 1 SETILRWLNEYIALDHFKLDGRGSGCREWILSEDDLLNKLLTHLKTEKRRTVSKAVEYINNTLLTSEGTSMSEARMKDVYGIVKPVSRGLVHFWLRRADCKFDRATQSYYTDGHNKEEVIASRLVYLAKLRRLSLRQ 411
+ TIL WL ++ FKLD RG R+WI+SE+DL ++L+ ++ +KR TV YIN L +E +S Y + PVS H W+ CK++RAT+S+YTDGH K++V+ R Y+ R+L+LRQ
Sbjct: 130 ASTILGWLRDFRGHGGFKLDSRGVHERDWIMSEEDLKDELIKWMRRQKRLTVKDVQNYINQWLFANEIGDLSRLLS---YQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQ 263
BLAST of mRNA_H-canaliculatus_F_contig12899.2415.1 vs. uniprot
Match: A0A6H5J4M4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4M4_9PHAE) HSP 1 Score: 104 bits (259), Expect = 2.700e-23 Identity = 55/137 (40.15%), Postives = 80/137 (58.39%), Query Frame = 1
Query: 1 SETILRWLNEYIALDHFKLDGRGSGCREWILSEDDLLNKLLTHLKTEKRRTVSKAVEYINNTLLTSEGTSMSEARMKDVYGIVKPVSRGLVHFWLRRADCKFDRATQSYYTDGHNKEEVIASRLVYLAKLRRLSLRQ 411
+ TIL WL ++ FK D RG R+WI+SE+DL ++L+ ++T+KR TV YIN L E +S Y + PVS H W+ CK++RAT+S+YTDGH K++V+ R Y+ R+L+LRQ
Sbjct: 208 ASTILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDELIKWMRTQKRLTVKDVQNYINQWLFAYEIGDLSRLLS---YQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQ 341
BLAST of mRNA_H-canaliculatus_F_contig12899.2415.1 vs. uniprot
Match: A0A6H5L611_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L611_9PHAE) HSP 1 Score: 102 bits (255), Expect = 9.140e-23 Identity = 52/135 (38.52%), Postives = 80/135 (59.26%), Query Frame = 1
Query: 7 TILRWLNEYIALDHFKLDGRGSGCREWILSEDDLLNKLLTHLKTEKRRTVSKAVEYINNTLLTSEGTSMSEARMKDVYGIVKPVSRGLVHFWLRRADCKFDRATQSYYTDGHNKEEVIASRLVYLAKLRRLSLRQ 411
TILRWL ++ F+ D RG+ +WI+SE+DL + LL + ++ R T+ +YIN LL + +S Y + PVS H W+ R C+++RAT+S+YTD H K+EV+ R Y+ K R+++LRQ
Sbjct: 318 TILRWLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRFTIKDVCKYINGPLLQDDKEDLSRLH---AYQVNLPVSMSTTHSWMIRLGCRYERATKSFYTDTHEKKEVVEYRGEYIEKRRKMALRQ 449
BLAST of mRNA_H-canaliculatus_F_contig12899.2415.1 vs. uniprot
Match: A0A6H5JMT5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMT5_9PHAE) HSP 1 Score: 102 bits (253), Expect = 1.650e-22 Identity = 54/137 (39.42%), Postives = 80/137 (58.39%), Query Frame = 1
Query: 1 SETILRWLNEYIALDHFKLDGRGSGCREWILSEDDLLNKLLTHLKTEKRRTVSKAVEYINNTLLTSEGTSMSEARMKDVYGIVKPVSRGLVHFWLRRADCKFDRATQSYYTDGHNKEEVIASRLVYLAKLRRLSLRQ 411
+ TIL WL ++ K D RG R+WI+SE+DL ++L+ ++T+KR TV YIN L +E +S Y + PVS H W+ CK++RAT+S+YTDGH K++V+ R Y+ R+L+LRQ
Sbjct: 270 ASTILGWLRDFRGHGGSKRDSRGVHERDWIMSEEDLKDELVMWMRTQKRLTVKDVQNYINQWLFANEIGDLSRLLS---YQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQ 403
BLAST of mRNA_H-canaliculatus_F_contig12899.2415.1 vs. uniprot
Match: A0A6H5JMQ7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMQ7_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 1.060e-21 Identity = 50/135 (37.04%), Postives = 80/135 (59.26%), Query Frame = 1
Query: 7 TILRWLNEYIALDHFKLDGRGSGCREWILSEDDLLNKLLTHLKTEKRRTVSKAVEYINNTLLTSEGTSMSEARMKDVYGIVKPVSRGLVHFWLRRADCKFDRATQSYYTDGHNKEEVIASRLVYLAKLRRLSLRQ 411
TILRWL ++ F+ D RG+ +WI+SE+DL + LL + ++ R T+ + +YIN LL + + Y + PVS +H W+ R C+++R T+S+YTD H K+EV+ R Y+ K R+++LRQ
Sbjct: 271 TILRWLRDFRKEGGFRRDARGAHEPDWIMSEEDLKSALLAWMISQPRFTIKEVCKYINGPLLQDD--KEEDLSRLHAYQVNLPVSMSTMHSWMIRLGCRYERGTKSFYTDTHEKKEVVEYRGEYIEKRRKMALRQ 403
BLAST of mRNA_H-canaliculatus_F_contig12899.2415.1 vs. uniprot
Match: A0A6H5K7P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7P7_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 2.780e-21 Identity = 52/137 (37.96%), Postives = 79/137 (57.66%), Query Frame = 1
Query: 1 SETILRWLNEYIALDHFKLDGRGSGCREWILSEDDLLNKLLTHLKTEKRRTVSKAVEYINNTLLTSEGTSMSEARMKDVYGIVKPVSRGLVHFWLRRADCKFDRATQSYYTDGHNKEEVIASRLVYLAKLRRLSLRQ 411
+ TIL WL ++ FK D RG R+WI+SE+D ++L+ ++T+KR TV YIN L ++ +S Y + PVS H W+ CK++RAT+S+YTDGH K++V+ R Y+ R+L+L Q
Sbjct: 385 ASTILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDPKDELIKWMRTQKRLTVKDVQNYINQWLFANQIGDLSRLLS---YQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALWQ 518
BLAST of mRNA_H-canaliculatus_F_contig12899.2415.1 vs. uniprot
Match: A0A6H5JVN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN6_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 3.770e-21 Identity = 49/123 (39.84%), Postives = 72/123 (58.54%), Query Frame = 1
Query: 1 SETILRWLNEYIALDHFKLDGRGSGCREWILSEDDLLNKLLTHLKTEKRRTVSKAVEYINNTLLTSEGTSMSEARMKDVYGIVKPVSRGLVHFWLRRADCKFDRATQSYYTDGHNKEEVIASR 369
+ TIL WL ++ FK D RG R+WI+SE+DL ++L+ ++T+KR TV YIN L +E +S Y + PVS H W+ CK++RAT+S+YTDGH K++V+ R
Sbjct: 319 ASTILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDQLIKWMRTQKRLTVKDVQNYINQWLFANEIGDLSRLLS---YQVNLPVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYR 438
BLAST of mRNA_H-canaliculatus_F_contig12899.2415.1 vs. uniprot
Match: A0A6H5JI16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI16_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 4.850e-21 Identity = 52/137 (37.96%), Postives = 79/137 (57.66%), Query Frame = 1
Query: 1 SETILRWLNEYIALDHFKLDGRGSGCREWILSEDDLLNKLLTHLKTEKRRTVSKAVEYINNTLLTSEGTSMSEARMKDVYGIVKPVSRGLVHFWLRRADCKFDRATQSYYTDGHNKEEVIASRLVYLAKLRRLSLRQ 411
+ T+L WL ++ FK D R R+WI+S++DL ++L+ ++T+KR TV YIN L +E +S V PVS H W+ CK++RAT+S+YTDGH K++V+ R Y+ R+L+LRQ
Sbjct: 228 ASTVLGWLRDFRGHGGFKRDSRRVHERDWIMSKEDLKDELIKWMRTQKRLTVKDVQNYINQWLFANEIGDLSRLLSHQVN---LPVSMVTTHSWIIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQ 361
BLAST of mRNA_H-canaliculatus_F_contig12899.2415.1 vs. uniprot
Match: A0A6H5KP29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP29_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 6.590e-20 Identity = 49/121 (40.50%), Postives = 72/121 (59.50%), Query Frame = 1
Query: 49 FKLDGRGSGCREWILSEDDLLNKLLTHLKTEKRRTVSKAVEYINNTLLTSEGTSMSEARMKDVYGIVKPVSRGLVHFWLRRADCKFDRATQSYYTDGHNKEEVIASRLVYLAKLRRLSLRQ 411
FK D RG R+WI+SE+DL ++L+ ++T+KR TV YIN L SE +S Y + PVS H W+ CK+++AT+S+YTDGH ++ V+ R Y+ R+L+LRQ
Sbjct: 58 FKRDSRGVHRRDWIMSEEDLKDELIKWMRTQKRLTVKDVQNYINQWLFASEIGDLSTLLS---YQVNLPVSMSTTHSWMIALGCKYEQATKSFYTDGHEEKVVVVYRGKYIDVKRKLALRQ 175
BLAST of mRNA_H-canaliculatus_F_contig12899.2415.1 vs. uniprot
Match: A0A6H5K2T4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2T4_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 4.060e-17 Identity = 48/137 (35.04%), Postives = 75/137 (54.74%), Query Frame = 1
Query: 1 SETILRWLNEYIALDHFKLDGRGSGCREWILSEDDLLNKLLTHLKTEKRRTVSKAVEYINNTLLTSEGTSMSEARMKDVYGIVKPVSRGLVHFWLRRADCKFDRATQSYYTDGHNKEEVIASRLVYLAKLRRLSLRQ 411
+ TIL WL ++ FK D RG R+WI+SE+DL ++L+ ++T+KR LT++ ++ PVS H W+ CK++RAT+S+YTDGH K++V+ R Y+ R+L+LRQ
Sbjct: 399 ASTILGWLRDFRGHGGFKRDSRGVHERDWIMSEEDLKDELIKWMRTQKR--------------LTAKDVNL-------------PVSMATTHSWMIALGCKYERATKSFYTDGHEKKDVVVYRGKYIDVKRKLALRQ 508 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12899.2415.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12899.2415.1 >prot_H-canaliculatus_F_contig12899.2415.1 ID=prot_H-canaliculatus_F_contig12899.2415.1|Name=mRNA_H-canaliculatus_F_contig12899.2415.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=137bp SETILRWLNEYIALDHFKLDGRGSGCREWILSEDDLLNKLLTHLKTEKRRback to top mRNA from alignment at H-canaliculatus_F_contig12899:591..1001- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12899.2415.1 ID=mRNA_H-canaliculatus_F_contig12899.2415.1|Name=mRNA_H-canaliculatus_F_contig12899.2415.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=411bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12899:591..1001- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12899:591..1001- >mRNA_H-canaliculatus_F_contig12899.2415.1 ID=mRNA_H-canaliculatus_F_contig12899.2415.1|Name=mRNA_H-canaliculatus_F_contig12899.2415.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=822bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12899:591..1001- (Hapterophycus canaliculatus Oshoro5f female)back to top |