mRNA_H-canaliculatus_F_contig1288.2401.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1288.2401.1
Unique NamemRNA_H-canaliculatus_F_contig1288.2401.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1288.2401.1 vs. uniprot
Match: D8LHF0_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHF0_ECTSI)

HSP 1 Score: 276 bits (706), Expect = 1.210e-86
Identity = 135/206 (65.53%), Postives = 164/206 (79.61%), Query Frame = 2 
Query:   77 MAPIKLTYFDVPGLGEPVRLALAQSGVDWEDNVINGDDWLVLKPTLPFGQLPILEVDGVIIPQSLAQLRYVGKIGGLYPTNPIQAAFCDAAADTLTDIYIPIRNSFEQKDQKKKMEMRKNLVENVVPTWLANLEKVLDSAGGKYFAAGKLSIGDIAVVARLNWIKTGSLEGIPPTIVDGSPLLSSLVERVMAEPRIATYMESRIKK 694
            MAP+KLTYF+   LGEP+RLALAQSGV+W DN +  + W  LKPTLP+ Q+P+LEVDG +IPQSLA LRYVGKIG LYPT+PIQAAF D+A D ++DI   +R    +KD  KK ++RK+LVE ++PTWLANLEK L  AGG+YFA  KLSIGDIAVVARLNW+  G+ EG+P T++D SPL+SSLV+RVMAEPRI  YME R KK
Sbjct:    1 MAPMKLTYFEFAALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQMPVLEVDGAVIPQSLAILRYVGKIGNLYPTDPIQAAFADSATDAVSDIQGYMRGIIFEKDADKKAQLRKDLVETLLPTWLANLEKALKLAGGEYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPLVSSLVQRVMAEPRIVAYMEERPKK 206
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1288.2401.1 vs. uniprot
Match: D8LK37_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK37_ECTSI)

HSP 1 Score: 257 bits (657), Expect = 2.590e-79
Identity = 128/207 (61.84%), Postives = 159/207 (76.81%), Query Frame = 2 
Query:   77 MAPIKLTYFDVPGLGEPVRLALAQSGVDWEDNVINGDDWLVLKPTLPFGQLPILEVDGVIIPQSLAQLRYVGKIGGLYPTNPIQAAFCDAAADTLTDIYIPIRNSFEQKDQKKKMEMRKNLVENVVPTWLANLEKVLDSAGGKYFAAGKLSIGDIAVVARLNWIKTGSL-EGIPPTIVDGSPLLSSLVERVMAEPRIATYMESRIKK 694
            MAP+KLTYFD+  LGE +RLALAQSGV+W DN +  ++W  LKPTLP+ Q+P+LEVDG +IPQ+ A LRYVGK+G LYPT+PIQAAF D+A D + D++  +R  F +KD   K ++ K+LVE ++P WLANLEK L  AGGKYFA  KLSIGDIAVVARLNW+  G+  E +P  I++  PLLSSLV+RVMAEPRI  YME R KK
Sbjct:    1 MAPMKLTYFDIAALGEQLRLALAQSGVEWIDNRVTFEEWPTLKPTLPYQQMPVLEVDGAVIPQTFAILRYVGKMGDLYPTDPIQAAFADSATDAVNDMHGHMRAIFFEKDADAKTQLLKDLVEKLLPPWLANLEKALKLAGGKYFAGDKLSIGDIAVVARLNWLTDGTFDESVPSAILEEFPLLSSLVQRVMAEPRIVAYMEERPKK 207
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1288.2401.1 vs. uniprot
Match: B1N8E6_9PHAE (Glutathione S-transferase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E6_9PHAE)

HSP 1 Score: 250 bits (638), Expect = 1.630e-76
Identity = 116/197 (58.88%), Postives = 155/197 (78.68%), Query Frame = 2 
Query:   92 LTYFDVPGLGEPVRLALAQSGVDWEDNVINGDDWLVLKPTLPFGQLPILEVDGVIIPQSLAQLRYVGKIGGLYPTNPIQAAFCDAAADTLTDIYIPIRNSFEQKDQKKKMEMRKNLVENVVPTWLANLEKVLDSAGGKYFAAGKLSIGDIAVVARLNWIKTGSLEGIPPTIVDGSPLLSSLVERVMAEPRIATYMES 682
            L+YFD+P LGEP+RLALA SG  WED  ++ ++++ +KP+LP+ QLP LEV G +IPQSLAQ+RY+GKIGGLY  +PI+AAF DAA + + D++  +R +  ++D  KK+EMRK + +N +PTWL NLE+ L +AGG YFA GKLSIGDI VVARLNW+K G+L+GIP TIVD  PLLS+LV+ VM+E +I  Y+ES
Sbjct:    7 LSYFDIPALGEPLRLALAMSGQAWEDKRVSKEEFMAIKPSLPYNQLPTLEVGGTLIPQSLAQMRYIGKIGGLYSEDPIEAAFADAAMEAVIDMHFHLRPTVHEQDPAKKLEMRKAMTDNYLPTWLGNLERALKAAGGSYFAGGKLSIGDIYVVARLNWLKRGALDGIPDTIVDDFPLLSALVQSVMSEEKIVKYLES 203
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1288.2401.1 vs. uniprot
Match: B1N8E7_9PHAE (Glutathione S-transferase 2 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E7_9PHAE)

HSP 1 Score: 237 bits (605), Expect = 1.650e-71
Identity = 124/214 (57.94%), Postives = 158/214 (73.83%), Query Frame = 2 
Query:   77 MAP---IKLTYFDVPGLGEPVRLALAQSGVDWEDNVINGDDWLVLKPTLPFGQLPILEVDGVIIPQSLAQLRYVGKIGGLYPTNPIQAAFCDAAADTLTDIYIPIRNSFEQKDQKKKMEMRKNLVENVVPTWLANLEKVLDSAGGKYFAAGKLSIGDIAVVARLNWIKTGSLEGIPPTIVDGSPLLSSLVERVMAEPRIATYMESRIKKKTGNK 709
            MAP   + LTYFD  G  EPVR+ALA +G  WED  ++  ++  LKP LP GQLPILEV G ++PQS AQLRYVGK+ GLYP + ++AA  DAA D++ D ++ +  + +QKD+ ++MEMR+NLV + +PTWL NLEK L +AGG YFA GKLSIGDIAVVARL W+K GSL+GIP +IVD  PLLS+L+ERV AEP IA Y + R +  T NK
Sbjct:    1 MAPTTSLTLTYFDFAGPAEPVRMALAMTGQPWEDKRVSFSEFPALKPGLPNGQLPILEVGGKVLPQSGAQLRYVGKLAGLYPEDALEAALADAAVDSVGDNHMKLAPTVQQKDKVQQMEMRQNLVRDFLPTWLGNLEKALANAGGTYFAGGKLSIGDIAVVARLVWLKEGSLDGIPTSIVDEYPLLSALIERVNAEPNIAKYHQERSE--TTNK 212
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BLAST of mRNA_H-canaliculatus_F_contig1288.2401.1 vs. uniprot
Match: B1N8E8_9PHAE (Glutathione S-transferase 3 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E8_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 1.320e-58
Identity = 99/202 (49.01%), Postives = 143/202 (70.79%), Query Frame = 2 
Query:   77 MAP-IKLTYFDVPGLGEPVRLALAQSGVDWEDNVINGDDWLVLKPTLPFGQLPILEVDGVIIPQSLAQLRYVGKIGGLYPTNPIQAAFCDAAADTLTDIYIPIRNSFEQKDQKKKMEMRKNLVENVVPTWLANLEKVLDSAGGKYFAAGKLSIGDIAVVARLNWIKTGSLEGIPPTIVDGS-PLLSSLVERVMAEPRIATYM 676
            MAP + LTYFD+PG  EP+R AL QSG +WED  + G+++ V+KP+LP GQLP+LEVDG  +PQS+  LRYVGK+GGL+P++ ++AA CDA  D   D YI +R ++ +KDQ K++EM  +L  N +P WLAN+EK L +  G YFA  K+S+ DI +  RL  ++ G+  G+P TI D S P L++L + ++ EP+IA ++
Sbjct:    1 MAPKLVLTYFDIPGAAEPIRWALEQSGQEWEDKRLTGEEFGVVKPSLPNGQLPVLEVDGYTLPQSMTILRYVGKLGGLHPSDDLEAAKCDAVLDAAVDFYINVRPAYTEKDQAKQLEMFGDLAVNYIPKWLANVEKQLAATEGIYFAE-KMSVADIMITTRLKTLRDGNYNGVPTTIFDSSYPNLNALYDSIVGEPKIAAFI 201
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1288.2401.1 vs. uniprot
Match: A0A6H5JAZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAZ7_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 3.180e-56
Identity = 95/156 (60.90%), Postives = 120/156 (76.92%), Query Frame = 2 
Query:  227 LPILEVDGVIIPQSLAQLRYVGKIGGLYPTNPIQAAFCDAAADTLTDIYIPIRNSFEQKDQKKKMEMRKNLVENVVPTWLANLEKVLDSAGGKYFAAGKLSIGDIAVVARLNWIKTGSLEGIPPTIVDGSPLLSSLVERVMAEPRIATYMESRIKK 694
            +P+LEVDG +IPQS+A LRYVGK+G LYP +PIQAAF D+A D ++DI+  +R    +KD   K ++RK+LVE ++P WL N EK L  AGGKYFA  KLSIGDIAVVARLNW+  G+ EG+P T+++  PLLSSLV+R+MAEPRI  YME R KK
Sbjct:    1 MPVLEVDGAVIPQSVAILRYVGKMGNLYPNDPIQAAFADSAVDAVSDIHGYMRGIIFEKDADAKAQLRKDLVETLLPPWLTNSEKALKLAGGKYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLEEFPLLSSLVQRIMAEPRIVAYMEGRPKK 156
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1288.2401.1 vs. uniprot
Match: A0A6H5KRV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRV2_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 1.700e-53
Identity = 93/206 (45.15%), Postives = 139/206 (67.48%), Query Frame = 2 
Query:   77 MAP-IKLTYFDVPGLGEPVRLALAQSGVDWEDNVINGDDWLVLKPTLPFGQLPILEVDGVIIPQSLAQLRYVGKIGGLYPTNPIQAAFCDAAADTLTDIYIPIRNSFEQKDQKKKMEMRKNLVENVVPTWLANLEKVLDSAGGKYFAAGKLSIGDIAVVARLNWIKTGSLEGIPPTIVDGSPLLSSLVERVMAEPRIATYMESRIK 691
            MAP + L YFD  G  EP+R AL +  ++WED  +  +++  LKP+LP GQ+P+L +DG  + QS+A LRYVGK+GGL P++ + AA CDA  D +TD++I IR SF +KD+ KKMEMR +L  N +P WL+N+EK L S  G +F   K+++ DI +  RL+ ++ G L+GIP TI D  P L ++ + V++EP++A ++    K
Sbjct:    1 MAPKLILKYFDKAGAAEPIRWALEKGSLEWEDKRLTREEFGALKPSLPNGQVPVLSIDGFELAQSMAILRYVGKLGGLNPSDDLAAAKCDAIMDCVTDLHINIRPSFMEKDEAKKMEMRADLAANFIPKWLSNMEKQLSSTDGTFFF-DKMTVADIMIACRLHPMRNGVLDGIPTTIADSYPSLCAMCDAVVSEPKVAAFLAKHAK 205
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1288.2401.1 vs. uniprot
Match: D7FPV3_ECTSI (Glutathione S-transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV3_ECTSI)

HSP 1 Score: 166 bits (420), Expect = 3.950e-44
Identity = 86/210 (40.95%), Postives = 127/210 (60.48%), Query Frame = 2 
Query:   77 MAPIKLTYFDVPGLGEPVRLALAQSGVDWEDNVINGDDWLVLKPTLPFGQLPILEVDGVIIPQSLAQLRYVGKIGGLYPTNPIQAAFCDAAADTLTDIYIPIRNSFEQKDQKKKMEMRKNLVENVVPTWLANLEKVLDSAGGKYFAAGKLSIGDIAVVARLNWIKTGSLEGIPPTIVDGSPLLSSLVERVMAEPRIATYMESRIKKKTGN 706
            M+ I LTYFD+PG  E +RLA    G+ ++D  ++  ++  +K  LPF QLPIL VD  + PQS A LRY GKIGGLYP++PI AA  DA  D + DI   IR S  + + ++K+ MRK L E  +P WL  LE+ L+ AG  +F   +++I D+ +  R+ W++ G L GIP TI+     + +  E V + P++  Y ++   K TG+
Sbjct:    1 MSSITLTYFDIPGPAEAIRLAFYVGGIPFKDRRVSRQEFAKIKRDLPFAQLPILTVDDEVFPQSAAILRYAGKIGGLYPSDPIAAAKVDAVIDCMFDIQAAIRPSIYETNAQRKLSMRKELSEVTLPLWLQYLERWLERAGTTFFVGEEITICDLVIYTRMKWLRRGVLVGIPDTILRNFRRVRAHSEAVASHPKVDDYYKNGPGKVTGD 210
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1288.2401.1 vs. uniprot
Match: A0A061SAH2_9CHLO (Prostaglandin-H2 D-isomerase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SAH2_9CHLO)

HSP 1 Score: 162 bits (411), Expect = 3.280e-43
Identity = 76/196 (38.78%), Postives = 121/196 (61.73%), Query Frame = 2 
Query:   89 KLTYFDVPGLGEPVRLALAQSGVDWEDNVINGDDWLVLKPTLPFGQLPILEVDGVIIPQSLAQLRYVGKIGGLYPTNPIQAAFCDAAADTLTDIYIPIRNSFEQKDQKKKMEMRKNLVENVVPTWLANLEKVLDSAGGK-YFAAGKLSIGDIAVVARLNWIKTGSLEGIPPTIVDGSPLLSSLVERVMAEPRIATY 673
            KL+YFD  G+ EP+RLA A  G+D+ED+    +DW  LKP  P+G +P L +   +  QS A LRY GK+ GLYPT+P++A   D   D L D+++ ++ + +++D+KKKMEMRK L E  +P WL    K ++  G   Y     L+I D+ +   +  + +G L+GIP TI +  P +++L+E+V A+ ++  +
Sbjct:    4 KLSYFDFKGVAEPIRLAFAVGGIDFEDHRFQREDWPQLKPKTPYGSVPTLTIGDRVYAQSNAILRYAGKLAGLYPTDPVEALAVDQIVDALEDMFLHVKPTVQEQDEKKKMEMRKVLAEETLPKWLGYFNKHIEENGSSGYIVGDSLTIADLKLYTLIGLLTSGMLDGIPKTIAEPFPKVTALLEKVGADEKVKAF 199
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1288.2401.1 vs. uniprot
Match: A0A7S2V6C7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6C7_9STRA)

HSP 1 Score: 154 bits (388), Expect = 8.140e-40
Identity = 75/199 (37.69%), Postives = 119/199 (59.80%), Query Frame = 2 
Query:   86 IKLTYFDVPGLGEPVRLALAQSGVDWEDNVINGDDWLVLKPTLPFGQLPILEVDGVIIPQSLAQLRYVGKIGGLYPTNPIQAAFCDAAADTLTDIYIPIRNSFEQKDQKKKMEMRKNLVENVVPTWLANLEKVLDSAGGKYFAAGKLSIGDIAVVARLNWIKTGSLEGIPPTIVDGSPLLSSLVERVMAEPRIATYMES 682
            IKLTYF +PG     RLA    GVD+ED ++ G+D+  +K +LP  QLP+LEV+GV   +S+A LRY GK+ GLYP++P++A  CD   D +      +  +  + D +KKM+MR+ L    +PT    LE+ L+  GG +    +L+I D+ ++ ++ W+  G L+GIPP+ +D    + ++VE      ++A Y  S
Sbjct:   12 IKLTYFPLPGRAGYTRLAFYVGGVDFEDVIVKGEDFQAMKDSLPGKQLPVLEVNGVTYCESMAILRYAGKLSGLYPSDPVEALKCDMLIDMIQGAGNKVAATIREPDAEKKMKMREELASQTLPTLFGYLEEQLNKFGGNFCIGDQLTIADLELLIKVTWLTKGILDGIPPSWIDPFTKVKAIVEATKNHEKVAEYYAS 210
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1288.2401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHF0_ECTSI1.210e-8665.53Glutathione S-transferase n=1 Tax=Ectocarpus silic... [more]
D8LK37_ECTSI2.590e-7961.84Glutathione S-transferase n=1 Tax=Ectocarpus silic... [more]
B1N8E6_9PHAE1.630e-7658.88Glutathione S-transferase 1 n=1 Tax=Laminaria digi... [more]
B1N8E7_9PHAE1.650e-7157.94Glutathione S-transferase 2 n=1 Tax=Laminaria digi... [more]
B1N8E8_9PHAE1.320e-5849.01Glutathione S-transferase 3 n=1 Tax=Laminaria digi... [more]
A0A6H5JAZ7_9PHAE3.180e-5660.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRV2_9PHAE1.700e-5345.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPV3_ECTSI3.950e-4440.95Glutathione S-transferase n=2 Tax=Ectocarpus TaxID... [more]
A0A061SAH2_9CHLO3.280e-4338.78Prostaglandin-H2 D-isomerase n=1 Tax=Tetraselmis s... [more]
A0A7S2V6C7_9STRA8.140e-4037.69Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1288contigH-canaliculatus_F_contig1288:8236..13658 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score161.8
Seed ortholog evalue3.6e-37
Seed eggNOG ortholog36331.EPrPI00000020200
KEGG rclassRC00004,RC00069,RC00672,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944
KEGG koko:K00799,ko:K04097
KEGG TC1.A.12.2.2,1.A.12.3.2
KEGG ReactionR02266,R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905
KEGG Pathwayko00480,ko00590,ko00980,ko00982,ko00983,ko01100,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00590,map00980,map00982,map00983,map01100,map01524,map05200,map05204,map05225,map05418
GOsGO:0008150,GO:0010033,GO:0014070,GO:0042221,GO:0042493,GO:0045472,GO:0046677,GO:0050896,GO:0097327,GO:1901654,GO:1901700,GO:1904643
EggNOG free text desc.Glutathione S-transferase. Source PGD
EggNOG OGs1MFV7@121069,KOG1695@1,KOG1695@2759
EC2.5.1.18,5.3.99.2
COG Functional cat.O
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000
Hectar predicted targeting categoryother localisation
Exons6
Model size1716
Cds size639
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1288.2401.1prot_H-canaliculatus_F_contig1288.2401.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1288 9237..13582 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929019.1496232-UTR-H-canaliculatus_F_contig1288:8235..92361622929019.1496232-UTR-H-canaliculatus_F_contig1288:8235..9236Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1288 8236..9236 -
1696845649.457453-UTR-H-canaliculatus_F_contig1288:8235..92361696845649.457453-UTR-H-canaliculatus_F_contig1288:8235..9236Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1288 8236..9236 -
1622929019.2551231-UTR-H-canaliculatus_F_contig1288:13582..136581622929019.2551231-UTR-H-canaliculatus_F_contig1288:13582..13658Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1288 13583..13658 -
1696845649.526441-UTR-H-canaliculatus_F_contig1288:13582..136581696845649.526441-UTR-H-canaliculatus_F_contig1288:13582..13658Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1288 13583..13658 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929019.1630456-CDS-H-canaliculatus_F_contig1288:9236..94281622929019.1630456-CDS-H-canaliculatus_F_contig1288:9236..9428Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1288 9237..9428 -
1696845649.4693105-CDS-H-canaliculatus_F_contig1288:9236..94281696845649.4693105-CDS-H-canaliculatus_F_contig1288:9236..9428Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1288 9237..9428 -
1622929019.1801653-CDS-H-canaliculatus_F_contig1288:9973..100371622929019.1801653-CDS-H-canaliculatus_F_contig1288:9973..10037Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1288 9974..10037 -
1696845649.480914-CDS-H-canaliculatus_F_contig1288:9973..100371696845649.480914-CDS-H-canaliculatus_F_contig1288:9973..10037Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1288 9974..10037 -
1622929019.1999164-CDS-H-canaliculatus_F_contig1288:10216..102571622929019.1999164-CDS-H-canaliculatus_F_contig1288:10216..10257Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1288 10217..10257 -
1696845649.490648-CDS-H-canaliculatus_F_contig1288:10216..102571696845649.490648-CDS-H-canaliculatus_F_contig1288:10216..10257Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1288 10217..10257 -
1622929019.216565-CDS-H-canaliculatus_F_contig1288:11078..112871622929019.216565-CDS-H-canaliculatus_F_contig1288:11078..11287Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1288 11079..11287 -
1696845649.4990165-CDS-H-canaliculatus_F_contig1288:11078..112871696845649.4990165-CDS-H-canaliculatus_F_contig1288:11078..11287Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1288 11079..11287 -
1622929019.2301505-CDS-H-canaliculatus_F_contig1288:12094..121941622929019.2301505-CDS-H-canaliculatus_F_contig1288:12094..12194Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1288 12095..12194 -
1696845649.5073643-CDS-H-canaliculatus_F_contig1288:12094..121941696845649.5073643-CDS-H-canaliculatus_F_contig1288:12094..12194Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1288 12095..12194 -
1622929019.2440917-CDS-H-canaliculatus_F_contig1288:13549..135821622929019.2440917-CDS-H-canaliculatus_F_contig1288:13549..13582Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1288 13550..13582 -
1696845649.517493-CDS-H-canaliculatus_F_contig1288:13549..135821696845649.517493-CDS-H-canaliculatus_F_contig1288:13549..13582Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1288 13550..13582 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1288.2401.1

>prot_H-canaliculatus_F_contig1288.2401.1 ID=prot_H-canaliculatus_F_contig1288.2401.1|Name=mRNA_H-canaliculatus_F_contig1288.2401.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=213bp
MAPIKLTYFDVPGLGEPVRLALAQSGVDWEDNVINGDDWLVLKPTLPFGQ
LPILEVDGVIIPQSLAQLRYVGKIGGLYPTNPIQAAFCDAAADTLTDIYI
PIRNSFEQKDQKKKMEMRKNLVENVVPTWLANLEKVLDSAGGKYFAAGKL
SIGDIAVVARLNWIKTGSLEGIPPTIVDGSPLLSSLVERVMAEPRIATYM
ESRIKKKTGNKD*
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mRNA from alignment at H-canaliculatus_F_contig1288:8236..13658-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1288.2401.1 ID=mRNA_H-canaliculatus_F_contig1288.2401.1|Name=mRNA_H-canaliculatus_F_contig1288.2401.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5423bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1288:8236..13658- (Hapterophycus canaliculatus Oshoro5f female)
TGTTCACCCCGCGCCCTGTTCTTCTCGAGCTCTCTCCAAGAATATCATCC
CCCCTGAAGATACCCTCACCCCCAGTATGGCGCCTATCAAGCTCACTTAC
TTCGATGTCGTGAGTGCAAACGATTGATTGATGATGTCGCTCGGTTTCTC
TTTACTTAGTCGGATCGGATCTTTCTAGTCTTACTGTGCATGTCTATCAT
TCAATGAGGATGTCTTCGGGCAATTCGACGTCTTTTCCACGTTTGTAGGC
TGTTTCGTCGGCTGTCGAGGGTGTCGCTTCTTCCGTCTGTCAATACCCCT
GCATGTCCACTTTTATTTTAACGTCAAAACGTACTTCAAAAACTTTTCCT
GTAGTAAACGTCAGCCCTATTACGTCGTCCCTACTTACCTTTGCGAATGA
TTGCAGATCACTAGTAGTGAGTGGCAGACGGACATCAAATGAATCCACTT
TAAAACATAGTGGATGATGATGTAGACCGAGGTTTGCAGCGGGATTTCAC
TCACTACCCCCCAAAAGCGTACATGTTGTAATTTTTGTGGTCGTCGATGT
TCGTTCGTCAAGTTGTGCTCGTCGTATGGCTTCAGTTTTAGTCCAACAAC
AACGGTAAACAAGCGATGGCCACAACACTTGTATTTTGTGTAGGATCCTT
GATTGTTGTTGTGTACCTACATCACGCATAGATAGGCGTTGTGGTTCCTA
TCAAGTCACATTTAGCATTCAGCGGAGTCACGAGTATAGGCGGCACCAAC
GACGGAGGAGGGGCATGTAAATATTTCTGTGTAGAGAGAGGACCTAGGCG
TTTGTTGTACAACAAACTCTGCTATTAATAGACACTTTGATTGCTGTTCT
CGTTTCGATCTAGAATATTACAGACGAGCGATGTTGCGCAGATGATGAGC
AGCTATGGGATGAGTAAAAATAATAGGAGGGAGAGGTACATACAGTCGAC
GTGTGTGGAACTTATTTGCAGTATTTAATAATATACGTACACGTGATGAC
TACGAATATACCGTGCGTGTTGTGTCTCTCTATCAGTGATGCTCCTGAGT
CTGCCTCGTTGCAACGAATATACTCATAGCAGACAAACAGACGTGGCCAC
AGGAAATACCAGATATACCTGCATTAACTATCTGGTCATAAATGAAGGAT
TTCGGAGTCCTTCAGGTTAATTCAATTGCTCACCCGCGCGTCCAACAAGT
AAAGAAATGAGAAATACCGTCCGAGTGCCTGAAGAGCGCTCACCAGAAAC
GTAGTTAGGATCCATGCGGTGAGATAATACACCCACCACAGTTACAGTAG
GGGATGCCGAAAAGACAACGGAATTATCTGGTACCATCGGTGCAACATTT
CTCAGATTCACCTCCACCATTTTCTCGAGGTGAATGCCACAGCAATTACT
TCCATGGGATGAAAAGCTCACGTGTACGTGTTTACGTGTGATCGGCCCAA
CCTCTCCCTCACAGCCTGGCTTGGGAGAGCCCGTCAGATTGGCGCTAGCG
CAGAGCGGCGTCGACTGGGAGGACAACGTTATAAACGGCGACGACTGGTT
GGTGCTGAAGCCAAGTGCGTGAGACCCTCGACGATAGAACATCTTTAGGC
TGTCGTATGCGCTCGGCTTAGACGCCATCTGGTTCCCCACCCTAGAAGTA
CAACAGCCAGCCTTCAACCGTGCCAATATTCGTGCCTCTTAGATCATGCG
CGTTGCGCCTAAAGGTCGCCATCCTCTTAGATCTTTCTTGGCTGAATATC
TCGCAAATAATCTGTAGGTGATTGCTTCTTCCGAGTATATTGTGTCTCAG
TGCCCTTTGTCAAGATACATCGTGGTGTTTCAGAGCGTAAGCGGCGTCGC
CAGGGTGGTTGACGTGTCTTAGGGGTTTTTCCATCATCTATCAAGAGTTT
GTAGCGGGCGTACACGAACTTCGTCCACACTGAATTTTTATCTTTCCAGA
GGAAAGACAGAACGCATTCTTCTTGCGGTTGGCATTATCATTTAGTCAAT
TGCCGAAGTCTGACCTACCTGCCAGGTACATCGTAAAGGATACGAAACGA
CGGCGATACAGGTACGGCATCGGTACAGATTTCAAGGATCGTGTTTTGTT
CGTCTACCTGTGCCGCACCCTCTCAATTTTTTTCTTATTTGTATACCTCT
TGAAGGAAACCTCTATGTTACGCCTCCTCTTTAATCCTCCATGTCTAAAA
TTGTCACCGCTTTTCCCTTGAGGTCGCCGTACTAAACCCCTTCTATGCAG
TTTTTCTCGTTCATGACTCGACATCGGTAAATCTCACATGAAAGTAAAAT
TACGCATGTACCATGGGTCCCTTGTGTGTCGCGGGATCAACCCCGTTACG
AACTCGCGCCGCCTCCTCTAGCTCTTCCGTTCGGGCAGTTACCTATCCTG
GAGGTTGATGGAGTGATAATCCCGCAAAGTTTGGCCCAGCTCCGCTACGT
CGGCAAGATCGGAGGCTTGTACCCCACCAACCCGATCCAAGCGGCCTTCT
GCGACGCAGCCGCTGACACCCTTACGGATATCTATATTCCCATCCGGAAC
TCATTTGAACAAAAGGACCAGAAAAAGAAGGTGAGGTAGTGGTAGATAGT
GCAAAGCACGCAACTTCAAAGGAGCTTAGCAACGGAGAACCTCGAGGTTC
GCTTCATTCAACACGAAAGAAAAATCGCGCCGTTCTTGTTTCACAAACTA
TTTGTCACAGAATCGGGAAGTAACAGGTTTTCATGTGCCTCCTACAATCC
AGAGAGTAAATTTATGGTTCGATATTAACAAACGTCGAGTCTGTCTCGCA
GACAACGTCCCGTTATGAAATAAACGCCCGAACAACCTTCCAGACATGAG
ACGGCGTCAAGCTCTACCCCCCCTCTTTCCGTAGGCTCCTTCTATTCGTC
GCGGTGTTTCTTCGTGTTGATTTTTTGAATCACTGGTGGCAATATATGCC
GGCGGCTACATAGAGCGCGTCACAGAGCCGAGGATAAATGCGTCCTTGCA
TCTCTCCGGCCGACCTGGCGTGCGGTGCCGCCGCTAGTCGCTCAACACGG
AACTCTTCTCCAAAACGAAATACGCTGGTCCAACCCTTCCCACGATCAAG
TGTAATTGTTCTCAAAGGTTTGCGTGATTCTACCCCGCTGTAAAAAGGAG
CTTTTAGCAATGCTCATCTCGGAGGTGTTGCACTCGACATGTAGCACGCA
GCGTGGCATGGTTTGATTCTTGCCACACCGTCAAACAAGATATCGACGAG
TACACACCTCTTTATGCTACACTTAATTGTCACTATCGATACCAATGGCA
GTCTGATTCTGTAGCGACCGGTGACCTCATCCTCCTCTCCCTCTTCATGT
CATTTGTGTATTTCCACCACCTTCCTCGGGCGGTGCGCCTCGTGATGACA
GATGGAAATGCGCAAAAATCTCGTGGAGAACGTGGTCCCAACGTGAGTGC
CGCCATCCGGTAGGAGATTGCCGCAGACTACAAGGGTGGATACCTGCGAC
AAGATATTGCGCCGATATTATTCTATGAATCAATAAGGAATCCGTCCATA
CGCTGGAATGGCATCCGAGCTGTTTCCTCTTTCCTGGTGCCCCTCGCCCT
TGCTCTCTCATCTCTGTACAGCTGGTTGGCCAACCTCGAGAAGGTCCTGG
ATTCGGCCGGCGGCAAGTACTTCGCCGCTGGGAAGGTAAGTCAGTTTTTT
ACAAAACAAGTCAACAACACCGAAGGAATACCCACTTGGGACACTGTCCA
TCTCAAGAGGCTTTTGTTCATTCCGTTCAGTGAGTGTTCCATTCGAGTGA
CAGGATAAAATTATGTCTCAGTTGGCAGGTCGTTTTGTTTCACCCTCCTC
CCTCGCTCGTTTGTGCGTCCCATGAAATGGAAGCGCTCGCCGTAGGAGCG
CGGTGCGCGCCTCCAGTACGGCTGCTGCTGCCGTTATGCATCGATCCAGG
TGACTCCGCTTGATGCTTTCTCACCTCCGGTGTTTGGTTGCTTTCCAAAC
CCATAAAAAGTCTATGCAGTCAACACCCGTGCTCGTTCCGCGTGTCCTCC
TTCTCTTTCCCACTCGCCCACAACAGGGATCCCCCTGATCGGTGGTCGGC
AGGCAAGGTCGTTCGTTCTGCGAATTGACTGCCCTTCCCTGCGAGGTAAA
ACAAGCCCCCCCCCCCGCCCCCCGCAAATGTCTCCCTATTCGTCCCTGGA
TCTTTCCTGATCGGGTCTTGTTTTTTGCAGCTTTCCATCGGCGACATCGC
GGTTGTCGCCCGTTTGAACTGGATCAAGACTGGCTCCCTCGAAGGCATTC
CCCCGACTATCGTCGACGGCTCGCCCCTCCTGTCGTCCCTGGTGGAGAGG
GTTATGGCCGAGCCTAGGATCGCGACGTACATGGAGTCCAGGATCAAGAA
AAAGACTGGAAACAAGGACTGATTGCGCAAGCAAGACGAGCTGGCGCATG
ATTTTGTACCCTTCGCGTTATGATGGCACGAACTCCTTAATAATTGCGGG
TCGATGGAGTCTGAGAGGGAGCACCTTCGCCTGCGGAGTAGAATCACGTG
GTCGGTAAATCGCAATATTTATTTGGGCAAGAAAGAGACTGATGTCGGCG
TCGCCGGATGCAGGGCGAGGAGTCGTTTGCCTCAAGTTTTGAGCGCTTTA
CCATATATATCTGTCCAGGACGTATTTTCTGTATATATATAATGTATTCT
GCGCGCTGTGATAGCACGAAATGATAGAATATCGCTGTCGGAGTAATCCG
GGAGGGAGCAAATGTGCTTGTCGAGTGGAGGTGTATGGTCGACTAAGCGA
TTCTGTATTGCTGTAATACAGTAGTAGGAGTCGGAGTCGCTGCAATCGGT
CGTTGGTTGTCTTCCTGAATTTGTGCATGATGAGTAACCTTTTCTGACCA
GACCACGTGGTCTGTGTGCGTGTTGGTAAATTTTTACGTGGTGATGGAAC
AGAGATGTCAATGATCTCGGGTCGGGGCAGTGCGATAGAGAGAAAACGTG
ATCTGGAAAGAAAACAAAACAACACCGTAGAACACCTCCTGAGGTACGTC
GTGTGAGGCGTAGCCCGAGGCTTCTGTTGAGTTCAAAACATATGATCGTT
GAATATAGAAGAGTATGGTGGGTGAGAGGCGTACTCGTGTTTTGTGGGAA
GAAGAGACGGTGACGTCGGTGTAGCCGCATGTAGGACGAAAAGTTAGCAC
GCTCGAGTTGCAAATGCTCTTGTTCTCACGTCTCGAGCGGGATCAGATGT
GGTGGTAAATATCTTGGGTCGTTATAGGCATGTGTCTGCATAGATTGGCC
TTACTGAGATATTGCACAGTCAACGGTACTTGATTTGGGTTCTTGCCTGC
ACATCCTCCGTCGAGTGGGCTGTACAATAACGAACGCTGAACATAAAATA
GACAACAGAATAAAAGTACTACC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1288:8236..13658-

>mRNA_H-canaliculatus_F_contig1288.2401.1 ID=mRNA_H-canaliculatus_F_contig1288.2401.1|Name=mRNA_H-canaliculatus_F_contig1288.2401.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1278bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1288:8236..13658- (Hapterophycus canaliculatus Oshoro5f female)
ATGGCGCCTATCAAGCTCACTTACTTCGATGTCATGGCGCCTATCAAGCT
CACTTACTTCGATGTCCCTGGCTTGGGAGAGCCCGTCAGATTGGCGCTAG
CGCAGAGCGGCGTCGACTGGGAGGACAACGTTATAAACGGCGACGACTGG
TTGGTGCTGAAGCCAACCTGGCTTGGGAGAGCCCGTCAGATTGGCGCTAG
CGCAGAGCGGCGTCGACTGGGAGGACAACGTTATAAACGGCGACGACTGG
TTGGTGCTGAAGCCAACTCTTCCGTTCGGGCAGTTACCTATCCTGGAGGT
TGATGGAGTGATAATCCCGCAAAGTTTGGCCCAGCTCCGCTACGTCGGCA
AGATCGGAGGCTTGTACCCCACCAACCCGATCCAAGCGGCCTTCTGCGAC
GCAGCCGCTGACACCCTTACGGATATCTATATTCCCATCCGGAACTCATT
TGAACAAAAGGACCAGAAAAAGAAGCTCTTCCGTTCGGGCAGTTACCTAT
CCTGGAGGTTGATGGAGTGATAATCCCGCAAAGTTTGGCCCAGCTCCGCT
ACGTCGGCAAGATCGGAGGCTTGTACCCCACCAACCCGATCCAAGCGGCC
TTCTGCGACGCAGCCGCTGACACCCTTACGGATATCTATATTCCCATCCG
GAACTCATTTGAACAAAAGGACCAGAAAAAGAAGATGGAAATGCGCAAAA
ATCTCGTGGAGAACGTGGTCCCAACATGGAAATGCGCAAAAATCTCGTGG
AGAACGTGGTCCCAACCTGGTTGGCCAACCTCGAGAAGGTCCTGGATTCG
GCCGGCGGCAAGTACTTCGCCGCTGGGAAGCTGGTTGGCCAACCTCGAGA
AGGTCCTGGATTCGGCCGGCGGCAAGTACTTCGCCGCTGGGAAGCTTTCC
ATCGGCGACATCGCGGTTGTCGCCCGTTTGAACTGGATCAAGACTGGCTC
CCTCGAAGGCATTCCCCCGACTATCGTCGACGGCTCGCCCCTCCTGTCGT
CCCTGGTGGAGAGGGTTATGGCCGAGCCTAGGATCGCGACGTACATGGAG
TCCAGGATCAAGAAAAAGACTGGAAACAAGGACTGACTTTCCATCGGCGA
CATCGCGGTTGTCGCCCGTTTGAACTGGATCAAGACTGGCTCCCTCGAAG
GCATTCCCCCGACTATCGTCGACGGCTCGCCCCTCCTGTCGTCCCTGGTG
GAGAGGGTTATGGCCGAGCCTAGGATCGCGACGTACATGGAGTCCAGGAT
CAAGAAAAAGACTGGAAACAAGGACTGA
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