mRNA_H-canaliculatus_F_contig12873.2396.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12873.2396.1 vs. uniprot
Match: A0A6H5JPI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPI7_9PHAE) HSP 1 Score: 135 bits (340), Expect = 1.490e-34 Identity = 76/105 (72.38%), Postives = 85/105 (80.95%), Query Frame = 1
Query: 1 SKGSMLLRRMGWKEGEGLGRRSDGALQPVQVERRGERAGLGTTQNSNNPFAIGADGRVSRWEQMRRRFSETQSSGPGGFREAARRASGASGGVRWLKGKAEGGGG 315
SKGSMLLRRMGWKEG+GLGRRSDG L+PV ERRGERAGLGT ++S++PFA+GADGR+S+WEQMRRRFSE S GF EA RRAS A G RWLKG G GG
Sbjct: 830 SKGSMLLRRMGWKEGQGLGRRSDGPLRPV--ERRGERAGLGT-RSSSSPFAVGADGRISKWEQMRRRFSEAAQSSGSGFGEAGRRASSAGXGGRWLKGGEXGRGG 931
BLAST of mRNA_H-canaliculatus_F_contig12873.2396.1 vs. uniprot
Match: D8LLZ9_ECTSI (Ankyrin repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLZ9_ECTSI) HSP 1 Score: 60.1 bits (144), Expect = 4.080e-8 Identity = 30/40 (75.00%), Postives = 34/40 (85.00%), Query Frame = 1
Query: 1 SKGSMLLRRMGWKEGEGLGRRSDGALQPVQVERRGERAGL 120
SKGSMLLRRMGWK+G+GLGRRSDG L+PVQ + E AGL
Sbjct: 826 SKGSMLLRRMGWKQGQGLGRRSDGPLRPVQARIKLEPAGL 865
BLAST of mRNA_H-canaliculatus_F_contig12873.2396.1 vs. uniprot
Match: A0A1V9Y0E5_9ACAR (Uncharacterized protein n=3 Tax=Dermanyssoidea TaxID=41438 RepID=A0A1V9Y0E5_9ACAR) HSP 1 Score: 59.3 bits (142), Expect = 7.350e-8 Identity = 31/70 (44.29%), Postives = 43/70 (61.43%), Query Frame = 1
Query: 1 SKGSMLLRRMGWKEGEGLGRRSDGALQPVQVERRGERAGLGTTQNSNNPFAIGADGRVSRWEQMRRRFSE 210
+KG +L+ MGW+EGEGLGR + G QPV V+ R ERAGLG + + D R RW++ R R+ +
Sbjct: 541 NKGFKMLQGMGWREGEGLGRSNQGGTQPVSVQMRNERAGLGREDATTHSD----DNRGERWKRARARYDQ 606
BLAST of mRNA_H-canaliculatus_F_contig12873.2396.1 vs. uniprot
Match: A0A1L8I202_XENLA (angiogenic factor with G patch and FHA domains 1 isoform X1 n=2 Tax=Xenopus laevis TaxID=8355 RepID=A0A1L8I202_XENLA) HSP 1 Score: 57.8 bits (138), Expect = 2.580e-7 Identity = 39/105 (37.14%), Postives = 60/105 (57.14%), Query Frame = 1
Query: 1 SKGSMLLRRMGWKEGEGLGRRSDGALQPVQVERRGERAGLGTTQNSNNPFAIGADGRVSR----WEQMRRRFSETQSSGPGGFREAARRASGASGGVRWLKGKAE 303
+KG +L +MGWK+GEGLG+ SDG P+Q++ R ++AGLG S NP +I + ++ WE+ R R++E F +A + S V W+KG A+
Sbjct: 596 NKGRKMLEKMGWKKGEGLGKTSDGIRDPIQLQLRKKKAGLG----SQNPTSIEDNQPPTQNQKNWEKARERYAEA-------FPDAKTKNETKSS-VTWIKGSAQ 688
BLAST of mRNA_H-canaliculatus_F_contig12873.2396.1 vs. uniprot
Match: A0A1Z5KW17_ORNMO (G-patch domain-containing protein (Fragment) n=1 Tax=Ornithodoros moubata TaxID=6938 RepID=A0A1Z5KW17_ORNMO) HSP 1 Score: 54.3 bits (129), Expect = 3.220e-7 Identity = 26/68 (38.24%), Postives = 45/68 (66.18%), Query Frame = 1
Query: 1 SKGSMLLRRMGWKEGEGLGRRSDGALQPVQVERRGERAGLGTTQNSNNPFAIGADGRVSRWEQMRRRF 204
+KG +L+++GWKEGEGLG++ G+ +PV VE+R AGLG +S+ D ++ W++ ++R+
Sbjct: 32 NKGFQMLQKLGWKEGEGLGKQQQGSTEPVLVEQRRTHAGLGAEDSSS------LDPKLQVWKKTKKRY 93
BLAST of mRNA_H-canaliculatus_F_contig12873.2396.1 vs. uniprot
Match: A0A1L8HRJ7_XENLA (angiogenic factor with G patch and FHA domains 1 isoform X1 n=2 Tax=Xenopus laevis TaxID=8355 RepID=A0A1L8HRJ7_XENLA) HSP 1 Score: 57.4 bits (137), Expect = 3.520e-7 Identity = 31/74 (41.89%), Postives = 45/74 (60.81%), Query Frame = 1
Query: 1 SKGSMLLRRMGWKEGEGLGRRSDGALQPVQVERRGERAGLGTTQNSNNPFAI----GADGRVSRWEQMRRRFSE 210
+KG +L +MGWK+G+GLG+ SDG P+Q++ R ++AGLG S NP +I WE+ R RF+E
Sbjct: 604 NKGRKMLEKMGWKKGDGLGKTSDGIRDPIQLQLRKKKAGLG----SQNPTSIEDIQSTTQNQKNWEKARERFAE 673
BLAST of mRNA_H-canaliculatus_F_contig12873.2396.1 vs. uniprot
Match: Q07FY9_XENTR (Angiogenic factor with G patch and FHA domains 1 (Fragment) n=1 Tax=Xenopus tropicalis TaxID=8364 RepID=Q07FY9_XENTR) HSP 1 Score: 56.2 bits (134), Expect = 4.010e-7 Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = 1
Query: 1 SKGSMLLRRMGWKEGEGLGRRSDGALQPVQVERRGERAGLG------------TTQNSNNPFAIGADGRVSRWEQMRRRFSE 210
+KG +L +MGWK+GEGLG+ SDG P+Q++ R ++AGLG TTQN N WE+ R R++E
Sbjct: 114 NKGRKMLEKMGWKKGEGLGKSSDGIRDPIQLQLRKKKAGLGAQNPTSIEDIQPTTQNKKN------------WEKARERYAE 183
BLAST of mRNA_H-canaliculatus_F_contig12873.2396.1 vs. uniprot
Match: A0A6I8PU18_XENTR (Angiogenic factor with G-patch and FHA domains 1 n=4 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A6I8PU18_XENTR) HSP 1 Score: 56.2 bits (134), Expect = 8.950e-7 Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = 1
Query: 1 SKGSMLLRRMGWKEGEGLGRRSDGALQPVQVERRGERAGLG------------TTQNSNNPFAIGADGRVSRWEQMRRRFSE 210
+KG +L +MGWK+GEGLG+ SDG P+Q++ R ++AGLG TTQN N WE+ R R++E
Sbjct: 617 NKGRKMLEKMGWKKGEGLGKSSDGIRDPIQLQLRKKKAGLGAQNPTSIEDIQPTTQNKKN------------WEKARERYAE 686
BLAST of mRNA_H-canaliculatus_F_contig12873.2396.1 vs. uniprot
Match: A0A2A6CBH7_PRIPA (G-patch domain-containing protein n=2 Tax=Pristionchus pacificus TaxID=54126 RepID=A0A2A6CBH7_PRIPA) HSP 1 Score: 56.2 bits (134), Expect = 8.980e-7 Identity = 31/72 (43.06%), Postives = 42/72 (58.33%), Query Frame = 1
Query: 7 GSMLLRRMGWKEGEGLGRRSDGALQPVQVERRGERAGLGTTQNSNNPFAIGADGRVSRWEQMRRRFSETQSS 222
G LL+ MGWKEGEGLGR+++G ++PV E +G+R GLG + AI W+ R RF E + S
Sbjct: 662 GFKLLKSMGWKEGEGLGRKNEGIVEPVANEFKGDRTGLGAAAVAPTKNAI--------WDLARSRFKEIEES 725
BLAST of mRNA_H-canaliculatus_F_contig12873.2396.1 vs. uniprot
Match: A0A6P4XV13_BRABE (angiogenic factor with G patch and FHA domains 1-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4XV13_BRABE) HSP 1 Score: 56.2 bits (134), Expect = 9.060e-7 Identity = 36/101 (35.64%), Postives = 54/101 (53.47%), Query Frame = 1
Query: 1 SKGSMLLRRMGWKEGEGLGRRSDGALQPVQVERRGERAGLGTTQNSNNPFAIGADGRVSRWEQMRRRFSETQSSG--PGGFREAARRASGASGGVRWLKGK 297
+KG +L +MGWKEG+GLG+ S G +PVQV R ++GLG + + G+ W + R RF + +G PG R +R+S W+KG+
Sbjct: 662 NKGRKMLEKMGWKEGKGLGKTSQGRQEPVQVSLRESQSGLGASAPRDVESVGLKTGKGKNWRKARERFYAMEQAGQPPGPSRTMNQRSS-------WVKGE 755 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12873.2396.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12873.2396.1 >prot_H-canaliculatus_F_contig12873.2396.1 ID=prot_H-canaliculatus_F_contig12873.2396.1|Name=mRNA_H-canaliculatus_F_contig12873.2396.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=108bp MLLRRMGWKEGEGLGRRSDGALQPVQVERRGERAGLGTTQNSNNPFAIGAback to top mRNA from alignment at H-canaliculatus_F_contig12873:2308..3363+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12873.2396.1 ID=mRNA_H-canaliculatus_F_contig12873.2396.1|Name=mRNA_H-canaliculatus_F_contig12873.2396.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1056bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12873:2308..3363+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12873:2308..3363+ >mRNA_H-canaliculatus_F_contig12873.2396.1 ID=mRNA_H-canaliculatus_F_contig12873.2396.1|Name=mRNA_H-canaliculatus_F_contig12873.2396.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=648bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12873:2308..3363+ (Hapterophycus canaliculatus Oshoro5f female)back to top |