mRNA_H-canaliculatus_F_contig12872.2395.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12872.2395.1 vs. uniprot
Match: D8LN05_ECTSI (PHD-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN05_ECTSI) HSP 1 Score: 208 bits (529), Expect = 1.170e-59 Identity = 120/157 (76.43%), Postives = 124/157 (78.98%), Query Frame = 1
Query: 94 KDKKLQAIKQERYDVALERQNRLTAAAMAMQLPGNPLDQASRSCSCLAFLVNELGGVEKVAEMTGRKGRMIKKADGEVVYEKRNANGISMTMQARGRGGERGGALNVFEKECFMSGQKLVAIISEAASAGISLQADRRAKNQKPRVHITMEVRSSFD 564
KDKKLQ IKQ+RYDVA+ERQ RL AAA AMQLPGNPLDQ LVNELGG VAEMTGRKGRM+KK DGEVVYEKRNANGISMTMQ NVFEKECFMSGQKLVAIISEAASAGISLQADRRAKNQKPRVHITME+ S D
Sbjct: 83 KDKKLQDIKQQRYDVAVERQGRLLAAAKAMQLPGNPLDQ----------LVNELGGAGVVAEMTGRKGRMVKKPDGEVVYEKRNANGISMTMQ------------NVFEKECFMSGQKLVAIISEAASAGISLQADRRAKNQKPRVHITMELPWSAD 217
BLAST of mRNA_H-canaliculatus_F_contig12872.2395.1 vs. uniprot
Match: A0A8J2S7U1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S7U1_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.630e-29 Identity = 76/146 (52.05%), Postives = 93/146 (63.70%), Query Frame = 1
Query: 130 YDVALERQNRLTAAAMAMQLPGNPLDQASRSCSCLAFLVNELGGVEKVAEMTGRKGRMIKKA-DGEVVYEKRNANGISMTMQARGRGGERGGALNVFEKECFMSGQKLVAIISEAASAGISLQADRRAKNQKPRVHITMEVRSSFD 564
+D E + R AA + LPGNPLD L+ ELGG + VAEMTGRKGRM++ A G+VVYE RN+NG+S+ MQ N+ EK+ F G+K VAIISEAASAGISLQADRR NQ+ RVHIT+E+ S D
Sbjct: 695 FDEVRELRRRFLVAASKLGLPGNPLDT----------LIAELGGSDCVAEMTGRKGRMVRDATSGKVVYEARNSNGVSLEMQ------------NMHEKQAFNGGEKHVAIISEAASAGISLQADRRVANQRRRVHITLELPWSAD 818
BLAST of mRNA_H-canaliculatus_F_contig12872.2395.1 vs. uniprot
Match: A0A7S4A0M8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A0M8_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.680e-29 Identity = 76/146 (52.05%), Postives = 93/146 (63.70%), Query Frame = 1
Query: 130 YDVALERQNRLTAAAMAMQLPGNPLDQASRSCSCLAFLVNELGGVEKVAEMTGRKGRMIKKA-DGEVVYEKRNANGISMTMQARGRGGERGGALNVFEKECFMSGQKLVAIISEAASAGISLQADRRAKNQKPRVHITMEVRSSFD 564
+D E + R AA + LPGNPLD L+ ELGG + VAEMTGRKGRM++ A G+VVYE RN+NG+S+ MQ N+ EK+ F G+K VAIISEAASAGISLQADRR NQ+ RVHIT+E+ S D
Sbjct: 695 FDEVRELRRRFLVAASKLGLPGNPLDT----------LIAELGGSDCVAEMTGRKGRMVRDATSGKVVYEARNSNGVSLEMQ------------NMHEKQAFNGGEKHVAIISEAASAGISLQADRRVANQRRRVHITLELPWSAD 818
BLAST of mRNA_H-canaliculatus_F_contig12872.2395.1 vs. uniprot
Match: Q0WQ12_ARATH (Uncharacterized protein At1g79350 n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q0WQ12_ARATH) HSP 1 Score: 123 bits (309), Expect = 2.180e-29 Identity = 71/149 (47.65%), Postives = 99/149 (66.44%), Query Frame = 1
Query: 121 QERYDVALERQNRLTAAAMAMQLPGNPLDQASRSCSCLAFLVNELGGVEKVAEMTGRKGRMIKKADGE-VVYEKRNANGISMTMQARGRGGERGGALNVFEKECFMSGQKLVAIISEAASAGISLQADRRAKNQKPRVHITMEVRSSFD 564
Q+RY+ ALER++++ ++ LP NPLD +V++LGG EKVAEMTGR+G +++ ++G+ V Y+ RN I+M M +N+ EK+ FM G+KLVAIISEA SAG+SLQADRRA NQK RVH+T+E+ S D
Sbjct: 86 QKRYEAALERKSKIIEIIRSLNLPNNPLDD----------IVDQLGGPEKVAEMTGRRGMLVRASNGKGVTYQARNTKDITMEM------------VNMHEKQLFMDGKKLVAIISEAGSAGVSLQADRRAVNQKRRVHLTLELPWSAD 212
BLAST of mRNA_H-canaliculatus_F_contig12872.2395.1 vs. uniprot
Match: A0A178W070_ARATH (EMB1135 n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=A0A178W070_ARATH) HSP 1 Score: 123 bits (309), Expect = 2.980e-29 Identity = 71/149 (47.65%), Postives = 99/149 (66.44%), Query Frame = 1
Query: 121 QERYDVALERQNRLTAAAMAMQLPGNPLDQASRSCSCLAFLVNELGGVEKVAEMTGRKGRMIKKADGE-VVYEKRNANGISMTMQARGRGGERGGALNVFEKECFMSGQKLVAIISEAASAGISLQADRRAKNQKPRVHITMEVRSSFD 564
Q+RY+ ALER++++ ++ LP NPLD +V++LGG EKVAEMTGR+G +++ ++G+ V Y+ RN I+M M +N+ EK+ FM G+KLVAIISEA SAG+SLQADRRA NQK RVH+T+E+ S D
Sbjct: 767 QKRYEAALERKSKIIEIIRSLNLPNNPLDD----------IVDQLGGPEKVAEMTGRRGMLVRASNGKGVTYQARNTKDITMEM------------VNMHEKQLFMDGKKLVAIISEAGSAGVSLQADRRAVNQKRRVHLTLELPWSAD 893
BLAST of mRNA_H-canaliculatus_F_contig12872.2395.1 vs. uniprot
Match: A0A0R0GCU0_SOYBN (PHD-type domain-containing protein n=6 Tax=50 kb inversion clade TaxID=2231393 RepID=A0A0R0GCU0_SOYBN) HSP 1 Score: 123 bits (309), Expect = 3.090e-29 Identity = 77/169 (45.56%), Postives = 105/169 (62.13%), Query Frame = 1
Query: 79 LAKEAKDKKLQAIK------QERYDVALERQNRLTAAAMAMQLPGNPLDQASRSCSCLAFLVNELGGVEKVAEMTGRKGRMIKKADGE-VVYEKRNANGISMTMQARGRGGERGGALNVFEKECFMSGQKLVAIISEAASAGISLQADRRAKNQKPRVHITMEVRSSFD 564
L KE D+ LQA + Q+RYD ALER+ ++ ++ LP NPLD +V++LGG +KVAEMTGR+G +++ A G+ V Y+ RN ++M M +N+ EK+ FM G+K VAIISEA SAG+SLQADRRA NQK RVH+T+E+ S D
Sbjct: 704 LCKEKTDEYLQARQAYIAELQKRYDAALERKTKILEIIRSLDLPNNPLDD----------IVDQLGGPDKVAEMTGRRGMLVRAATGKGVTYQARNTKDVTMEM------------VNMHEKQLFMDGKKFVAIISEAGSAGVSLQADRRAANQKRRVHLTLELPWSAD 850
BLAST of mRNA_H-canaliculatus_F_contig12872.2395.1 vs. uniprot
Match: FGT1_ARATH (Protein FORGETTER 1 n=13 Tax=Brassicaceae TaxID=3700 RepID=FGT1_ARATH) HSP 1 Score: 123 bits (309), Expect = 3.100e-29 Identity = 71/149 (47.65%), Postives = 99/149 (66.44%), Query Frame = 1
Query: 121 QERYDVALERQNRLTAAAMAMQLPGNPLDQASRSCSCLAFLVNELGGVEKVAEMTGRKGRMIKKADGE-VVYEKRNANGISMTMQARGRGGERGGALNVFEKECFMSGQKLVAIISEAASAGISLQADRRAKNQKPRVHITMEVRSSFD 564
Q+RY+ ALER++++ ++ LP NPLD +V++LGG EKVAEMTGR+G +++ ++G+ V Y+ RN I+M M +N+ EK+ FM G+KLVAIISEA SAG+SLQADRRA NQK RVH+T+E+ S D
Sbjct: 757 QKRYEAALERKSKIIEIIRSLNLPNNPLDD----------IVDQLGGPEKVAEMTGRRGMLVRASNGKGVTYQARNTKDITMEM------------VNMHEKQLFMDGKKLVAIISEAGSAGVSLQADRRAVNQKRRVHLTLELPWSAD 883
BLAST of mRNA_H-canaliculatus_F_contig12872.2395.1 vs. uniprot
Match: A0A7S2HCC1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HCC1_9STRA) HSP 1 Score: 117 bits (292), Expect = 3.410e-29 Identity = 71/156 (45.51%), Postives = 98/156 (62.82%), Query Frame = 1
Query: 97 DKKLQAIKQERYDVALERQNRLTAAAMAMQLPGNPLDQASRSCSCLAFLVNELGGVEKVAEMTGRKGRMIKKADGEVVYEKRNANGISMTMQARGRGGERGGALNVFEKECFMSGQKLVAIISEAASAGISLQADRRAKNQKPRVHITMEVRSSFD 564
D + +A ++RY A ERQ A + LPGNPLD+ L++ LGG +KVAE+TGRKGR+++ A+G + YE RN NG+S+ +Q N+ EK FM+G+KLVAIIS+AAS+GISL A R KN + RVH+T+E+ S D
Sbjct: 65 DAEFEAEIEKRYRRAEERQKHFLERAAGLNLPGNPLDE----------LMDRLGGSDKVAELTGRKGRLVR-AEGGIFYEARNVNGVSLELQ------------NIHEKGEFMAGRKLVAIISDAASSGISLHASRMCKNGRRRVHMTLELPWSAD 197
BLAST of mRNA_H-canaliculatus_F_contig12872.2395.1 vs. uniprot
Match: V7AMT7_PHAVU (PHD-type domain-containing protein n=13 Tax=Phaseoleae TaxID=163735 RepID=V7AMT7_PHAVU) HSP 1 Score: 122 bits (306), Expect = 7.810e-29 Identity = 70/149 (46.98%), Postives = 97/149 (65.10%), Query Frame = 1
Query: 121 QERYDVALERQNRLTAAAMAMQLPGNPLDQASRSCSCLAFLVNELGGVEKVAEMTGRKGRMIKKADGE-VVYEKRNANGISMTMQARGRGGERGGALNVFEKECFMSGQKLVAIISEAASAGISLQADRRAKNQKPRVHITMEVRSSFD 564
Q+RYD ALER+ +++ ++ LP NPLD +V++LGG +KVAEMTGR+G +++ A G+ V Y+ RN ++M M +N+ EK+ FM G+K VAIISEA SAG+SLQADRRA NQK RVH+T+E+ S D
Sbjct: 730 QKRYDAALERKTKISEIIRSLDLPNNPLDD----------IVDQLGGPDKVAEMTGRRGMLVRAATGKGVTYQARNTKDVTMEM------------VNMHEKQLFMDGKKSVAIISEAGSAGVSLQADRRAANQKRRVHLTLELPWSAD 856
BLAST of mRNA_H-canaliculatus_F_contig12872.2395.1 vs. uniprot
Match: A0A061S9W8_9CHLO (Protein strawberry notch-like (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S9W8_9CHLO) HSP 1 Score: 117 bits (293), Expect = 1.840e-28 Identity = 71/148 (47.97%), Postives = 92/148 (62.16%), Query Frame = 1
Query: 124 ERYDVALERQNRLTAAAMAMQLPGNPLDQASRSCSCLAFLVNELGGVEKVAEMTGRKGRMIKK-ADGEVVYEKRNANGISMTMQARGRGGERGGALNVFEKECFMSGQKLVAIISEAASAGISLQADRRAKNQKPRVHITMEVRSSFD 564
E YD A+E + +L A + LP NPLD +++ LGGVE+VAEMTGRKGR ++ A G V +E RNA G+ T +NV E+E F SG+KLVA+ISEAASAGISL AD+RA N++ RVH T+E+ S D
Sbjct: 14 EAYDAAVEHKEKLQAEVAGLDLPKNPLDD----------VIDRLGGVERVAEMTGRKGRFVRDHATGTVQFEARNARGVPGTTLEM---------INVSERELFQSGKKLVAVISEAASAGISLHADKRAGNRRRRVHFTLELPWSAD 142 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12872.2395.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12872.2395.1 >prot_H-canaliculatus_F_contig12872.2395.1 ID=prot_H-canaliculatus_F_contig12872.2395.1|Name=mRNA_H-canaliculatus_F_contig12872.2395.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=188bp MDAAEQKARMKEERNAAKRAQKEVKRLAKEAKDKKLQAIKQERYDVALERback to top mRNA from alignment at H-canaliculatus_F_contig12872:475..2933- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12872.2395.1 ID=mRNA_H-canaliculatus_F_contig12872.2395.1|Name=mRNA_H-canaliculatus_F_contig12872.2395.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2459bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12872:475..2933- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12872:475..2933- >mRNA_H-canaliculatus_F_contig12872.2395.1 ID=mRNA_H-canaliculatus_F_contig12872.2395.1|Name=mRNA_H-canaliculatus_F_contig12872.2395.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1128bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12872:475..2933- (Hapterophycus canaliculatus Oshoro5f female)back to top |