mRNA_H-canaliculatus_F_contig1285.2375.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1285.2375.1 vs. uniprot
Match: D8LQ14_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ14_ECTSI) HSP 1 Score: 523 bits (1348), Expect = 4.080e-175 Identity = 292/368 (79.35%), Postives = 319/368 (86.68%), Query Frame = 3
Query: 117 MGCPFAQLSPILLLSCLVLFFQFGASFFSPKPLLASLQRGRSLTDASAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGPRMLGAAGVLAPAELQLQSDEVADEDLRGEPLPWTESLSSGGPLFYSSLLRWQASALQVGLGLDRLCVPRRMDTVCNPDKQSRVRNLVYAGERVRKVRMSYLDTPDMQVYSSVAYSAPGHDFPLLSLSAMAMGSHVRVIAIDLQPLFPGAEYAAKYAAANAKLKAIRQKYPQMGQELLRDYYKGSPFFSDNMMYARWGPEEEASGFMEKVVMPAFQECIQVYVDIVNNAPAQTPGSPTEQAVLERQAEFDRFHSEREQVRPVLTSNFGASFAETYVSEFLFPYG 1220
MGCPFAQLSP+LLLSCLVLFFQFGASF SPKPLLASLQRGRSL DASAG XXXXXXXXXXXXXXXXXXXXXXX GPRMLG + VLAP ELQLQSDE GEPL WTESL SGGPLF++ LLR QAS L+ L L R VPR MDTVCNP+++SRVRNL+Y G+RVRKVRMSYLDTPDMQVYS+VAYSAPGHDFPLL LSAMAMGS VRV+A+DLQPLFPG +YAAKYA ANAKLKAIR KYPQ+G+EL +DYYKGSPFFSD+MMYARWGP+EEA GFM+KVVMPAF+EC+Q YV+IVN APA PGSPTEQAVLERQAEFDRFH+EREQVRP+LTS FGASFA+TYVS+FLF YG
Sbjct: 1 MGCPFAQLSPLLLLSCLVLFFQFGASFLSPKPLLASLQRGRSLADASAGVGSSSRSRAXXXXXXXXXXXXXXXXXXXXXXXXXGPRMLGVSDVLAPPELQLQSDE----GFEGEPLAWTESLGSGGPLFFADLLRTQASTLEFELALGRSPVPRCMDTVCNPERRSRVRNLIYTGDRVRKVRMSYLDTPDMQVYSTVAYSAPGHDFPLLGLSAMAMGS-VRVLALDLQPLFPGEDYAAKYADANAKLKAIRNKYPQLGEELRKDYYKGSPFFSDSMMYARWGPKEEADGFMDKVVMPAFRECMQAYVEIVNQAPAHAPGSPTEQAVLERQAEFDRFHAEREQVRPILTSKFGASFADTYVSDFLFAYG 363
BLAST of mRNA_H-canaliculatus_F_contig1285.2375.1 vs. uniprot
Match: A0A6H5K0Q7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Q7_9PHAE) HSP 1 Score: 231 bits (589), Expect = 2.770e-66 Identity = 149/193 (77.20%), Postives = 159/193 (82.38%), Query Frame = 3
Query: 117 MGCPFAQLSPILLLSCLVLFFQFGASFFSPKPLLASLQRGRSLTDASAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGPRMLGAAGVLAPAELQLQSDEVADEDLRGEPLPWTESLSSGGPLFYSSLLRWQASALQVGLGLDRLCVPRRMDTVCNPDKQSRVRNLVYAGERVRKVRMSYLDTPDMQV 695
MGCPFAQLSP+LLLSCLVLFFQFGASF SPKPLLASLQRGRSLTDASAG XXXXXXXXXXXXXXXXXXXXXXX GPRMLG + VLAP ELQLQSDE GEPL WTESL SGGPLF++ LLR QAS L+V L L R VPR MDTVCNP+++SRVRNL+Y G+RVRKVRMSYLDTPDMQV
Sbjct: 1 MGCPFAQLSPLLLLSCLVLFFQFGASFLSPKPLLASLQRGRSLTDASAGVGSSSRSRAXXXXXXXXXXXXXXXXXXXXXXXXXGPRMLGVSDVLAPPELQLQSDE----GFEGEPLAWTESLGSGGPLFFADLLRTQASTLEVELALGRSPVPRCMDTVCNPERRSRVRNLIYTGDRVRKVRMSYLDTPDMQV 189
BLAST of mRNA_H-canaliculatus_F_contig1285.2375.1 vs. uniprot
Match: A0A7S2RIT5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RIT5_9STRA) HSP 1 Score: 127 bits (320), Expect = 1.330e-28 Identity = 82/253 (32.41%), Postives = 138/253 (54.55%), Query Frame = 3
Query: 465 PWTESLSS-GGPLFYSSLLRWQASALQVGLGLDRLCVPRRMDTVCNPDKQSRVRNLVYAGERVRKVRMSYLDTPD-MQVYSSVAYSAPGHDFPLLSLSAMAMGSHVRVIAIDLQPLFP--GAEYAAKYAAANAKLKAIRQKYPQMGQELLRDYYKGSPFFSDNMMYARWGPEEEASGFMEKVVMPAFQECIQVYVDIVNNAPAQTPGSPTEQAVLERQAEFDRFHSEREQVRPVLTSNFGASFAETYVSEFLF 1211
PWT +++S G L Y R Q L LG L + + N K++R+ + Y + RKVRM+Y D + +QV++S+ Y +D P+L + + G + ID QPL +EY A+++ ++K +++P + ++ +Y + FFSD M++ R+ E+ S +V +PAFQE +QVYVD+V + P T T + VL +QA +D++ +ER+ + S FG +A+ Y+S+FLF
Sbjct: 61 PWTSTIASDGAALHYMDFYRHQEEILVGKLGATPLPLKDSLSGAVNHGKEARIASACYETDVFRKVRMTYFDAGNKVQVFNSLWYPRLEYDAPVLGVDLLCFGKKKILAVIDCQPLVDRENSEYHAEFSQPFLRVK---EQFPSLCGKMSNRFYDENQFFSDGMLFGRF---EDTSPIASEV-LPAFQEYLQVYVDLVKDVPRDTTDKATAR-VLAQQAAYDQYSAERDPAHALFVSYFGEEWADEYMSDFLF 305
BLAST of mRNA_H-canaliculatus_F_contig1285.2375.1 vs. uniprot
Match: I4IE70_9CHRO (15,16-dihydrobiliverdin:ferredoxin oxidoreductase n=8 Tax=Microcystaceae TaxID=1890449 RepID=I4IE70_9CHRO) HSP 1 Score: 108 bits (271), Expect = 1.010e-22 Identity = 59/194 (30.41%), Postives = 108/194 (55.67%), Query Frame = 3
Query: 633 YAGERVRKVRMSYLDTPDM-QVYSSVAYSAPGHDFPLLSLSAMAMGSHVRVIAIDLQPLFPGAEYAAKYAAANAKLKAIRQKYPQMGQELLRDYYKGSPFFSDNMMYARWGPEEEASGFMEKVVMPAFQECIQVYVDIVNNAPAQTPGSPTEQAVLERQAEFDRFHSEREQVRPVLTSNFGASFAETYVSEFLF 1211
Y + RK+R +Y++ + Q+++SV Y + +D PLL + +A G ++ +D QPLF +Y KY +++IR KYP + Q+L YY + +FS +++A+ E + K + PA+QE IQ+Y ++ A T + E ++ Q ++DR+ +ER+ + +S FG ++E ++ +FLF
Sbjct: 58 YQCPQFRKIRYTYINAGETAQIFNSVIYPSYNYDLPLLGIDFLAFGKKKILVVLDFQPLFRDQDYLTKYIEP---MRSIRDKYPDLAQDLPMKYYDANQYFSPYLLFAKTDAET-----VVKQLFPAYQEFIQLYWQLLEKAQPLTSAAAQE-PIIAAQKDYDRYSAERDPASGLFSSYFGQEWSEKFLHQFLF 242
BLAST of mRNA_H-canaliculatus_F_contig1285.2375.1 vs. uniprot
Match: Q4BVE5_CROWT (Ferredoxin-dependent bilin reductase n=4 Tax=Crocosphaera watsonii TaxID=263511 RepID=Q4BVE5_CROWT) HSP 1 Score: 104 bits (259), Expect = 3.120e-21 Identity = 58/194 (29.90%), Postives = 110/194 (56.70%), Query Frame = 3
Query: 633 YAGERVRKVRMSYLDTPDM-QVYSSVAYSAPGHDFPLLSLSAMAMGSHVRVIAIDLQPLFPGAEYAAKYAAANAKLKAIRQKYPQMGQELLRDYYKGSPFFSDNMMYARWGPEEEASGFMEKVVMPAFQECIQVYVDIVNNAPAQTPGSPTEQAVLERQAEFDRFHSEREQVRPVLTSNFGASFAETYVSEFLF 1211
Y ++RK+R +Y++ + Q+++SV Y +D PLL + +A G ++ +D QPLF ++Y KY A IR KY ++ Q+L +Y + +FS +++AR P+ + + + PA+QE IQ+Y +V A +T + E+ +++ Q ++D++ +ER+ + S FG ++E ++ +FLF
Sbjct: 47 YECPQLRKIRYTYINAGETAQIFNSVIYPNHQYDLPLLGIDFLAFGKKKILVVLDFQPLFRDSDYLKKYIEPMAP---IRAKYNELAQDLEMRFYDANQYFSPYLLFARTNPQT-----VIEQLFPAYQEYIQLYWQLVEQAEPKTESTELER-IIKAQKDYDQYSAERDPASGLFNSYFGHEWSEKFLHKFLF 231
BLAST of mRNA_H-canaliculatus_F_contig1285.2375.1 vs. uniprot
Match: A0A0F5YJJ4_9CYAN (Dihydrobiliverdin:ferredoxin oxidoreductase n=1 Tax=Limnoraphis robusta CS-951 TaxID=1637645 RepID=A0A0F5YJJ4_9CYAN) HSP 1 Score: 102 bits (255), Expect = 1.110e-20 Identity = 59/194 (30.41%), Postives = 110/194 (56.70%), Query Frame = 3
Query: 633 YAGERVRKVRMSYLDTPDM-QVYSSVAYSAPGHDFPLLSLSAMAMGSHVRVIAIDLQPLFPGAEYAAKYAAANAKLKAIRQKYPQMGQELLRDYYKGSPFFSDNMMYARWGPEEEASGFMEKVVMPAFQECIQVYVDIVNNAPAQTPGSPTEQAVLERQAEFDRFHSEREQVRPVLTSNFGASFAETYVSEFLF 1211
Y ++RK+R +Y++ + Q+++SV Y + +D PLL + +A G ++ +D QPLF +EY KY A IR+KY ++ Q L +Y + +FS +++A+ E + + PA+QE IQ+Y ++ A A+T + E +++ Q ++D++ +ER+ + +S FG ++E ++ EFLF
Sbjct: 47 YQCPQLRKIRYTYINAGETAQIFNSVIYPSYQYDLPLLGIDFLAFGKKKILVVLDFQPLFRDSEYLEKYIEPMAP---IREKYNELAQGLEMKFYDANQYFSPYLLFAKTDGETVINR-----LFPAYQEYIQLYWKLLEQAEAKTDPAEIE-SIVRAQKDYDQYSAERDPASGLFSSYFGHEWSEKFLYEFLF 231
BLAST of mRNA_H-canaliculatus_F_contig1285.2375.1 vs. uniprot
Match: A0A8K2A7H3_9CYAN (15,16-dihydrobiliverdin:ferredoxin oxidoreductase n=1 Tax=Petrachloros mirabilis ULC683 TaxID=2781853 RepID=A0A8K2A7H3_9CYAN) HSP 1 Score: 99.0 bits (245), Expect = 2.300e-19 Identity = 57/200 (28.50%), Postives = 107/200 (53.50%), Query Frame = 3
Query: 618 VRNLVYAGERVRKVRMSYLDT-PDMQVYSSVAYSAPGHDFPLLSLSAMAMGSHVRVIAIDLQPLFPGAEYAAKYAAANAKLKAIRQKYPQMGQELLRDYYKGSPFFSDNMMYARWGPEEEASGFMEKVVMPAFQECIQVYVDIVNNAPAQTPGSPTE-QAVLERQAEFDRFHSEREQVRPVLTSNFGASFAETYVSEFLF 1211
+R+ Y +RK+R +Y+D Q+ +SV Y P ++ PLL + ++ G +I +D QPLF +Y KY LK +R +YP + Q L +Y + +FS +++A+ + +E V AF++ + +Y ++ A T P + Q +++ Q ++D++ ++R+ + +S FG +AE ++ EFLF
Sbjct: 42 IRSWCYQCPELRKIRYTYIDAGSSAQILNSVIYPHPAYELPLLGIDFLSFGQVKNLIVMDFQPLFQDEDYLRKYIYP---LKQLRDRYPDLAQNLEMKFYDANQYFSQYLLFAKTDAQT-----VETRVFAAFKDYLDLYWQMLETAKPFT--EPVDIQRIVQAQKDYDQYSADRDPASGLFSSYFGHEWAERFLYEFLF 231
BLAST of mRNA_H-canaliculatus_F_contig1285.2375.1 vs. uniprot
Match: K9PVB2_9CYAN (15,16-dihydrobiliverdin:ferredoxin oxidoreductase n=2 Tax=Pseudanabaenales TaxID=2881377 RepID=K9PVB2_9CYAN) HSP 1 Score: 97.1 bits (240), Expect = 1.520e-18 Identity = 54/195 (27.69%), Postives = 105/195 (53.85%), Query Frame = 3
Query: 633 YAGERVRKVRMSYLDTPDM-QVYSSVAYSAPGHDFPLLSLSAMAMGSHVRVIAIDLQPLFPGAEYAAKYAAANAKLKAIRQKYPQMGQELLRDYYKGSPFFSDNMMYARWGPEEEASGFMEKVVMPAFQECIQVYVDIVNNA-PAQTPGSPTEQAVLERQAEFDRFHSEREQVRPVLTSNFGASFAETYVSEFLF 1211
Y +RK+R +Y++ M Q+++SV Y + G+D PLL + +A G ++ +D QPLF Y KY +KAIR +Y ++ Q+L +Y + +FS +++A+ + + ++PAF+E + +Y ++ N P P + + + ++D++ ++R+ + S FG ++E ++ EFLF
Sbjct: 47 YQSPELRKIRYTYINAGKMAQIFNSVLYPSYGYDMPLLGIDFLAFGQKKILVVLDFQPLFRDEGYMEKYIEP---VKAIRDRYDELAQDLPMRFYDAAQYFSPYLLFAKTDADTVVNS-----LLPAFKEYLDLYCTMLKNLKPTDDPERIAK--ITQAHKDYDQYSADRDPAAGLFNSYFGHEWSEQFLHEFLF 231
BLAST of mRNA_H-canaliculatus_F_contig1285.2375.1 vs. uniprot
Match: A0A6P0SIH7_9CYAN (15,16-dihydrobiliverdin:ferredoxin oxidoreductase n=27 Tax=Moorena TaxID=1155738 RepID=A0A6P0SIH7_9CYAN) HSP 1 Score: 94.7 bits (234), Expect = 6.860e-18 Identity = 55/199 (27.64%), Postives = 106/199 (53.27%), Query Frame = 3
Query: 618 VRNLVYAGERVRKVRMSYLDT-PDMQVYSSVAYSAPGHDFPLLSLSAMAMGSHVRVIAIDLQPLFPGAEYAAKYAAANAKLKAIRQKYPQMGQELLRDYYKGSPFFSDNMMYARWGPEEEASGFMEKVVMPAFQECIQVYVDIVNNAPAQTPGSPTEQAVLERQAEFDRFHSEREQVRPVLTSNFGASFAETYVSEFLF 1211
+++ Y +RK+R +Y+D P QV++SV Y + +D PLL + ++ G ++ +D QPLF Y KY ++AIR +Y + Q L +Y + +FS +++A+ E ++ V A+++ + +Y +V A T Q +++ Q ++D++ ++R+ + +S FG +AE ++ EFLF
Sbjct: 42 IQSWCYQCPELRKIRYTYMDVGPASQVFNSVIYPSHCYDLPLLGIDFLSFGKKKILVVLDFQPLFRDEAYQEKYIEP---MRAIRDRYQDLAQNLEMKFYDANQYFSKYLLFAKIDSLET----VKTQVFEAYKDYLALYWQMVEQAQPLTDPEDI-QRIVKAQKDYDQYSADRDPAHGLFSSYFGPEWAEQFLYEFLF 232
BLAST of mRNA_H-canaliculatus_F_contig1285.2375.1 vs. uniprot
Match: A0A3C1M4H6_9CYAN (Phycoerythrobilin:ferredoxin oxidoreductase n=1 Tax=Cyanobacteria bacterium UBA8156 TaxID=2055767 RepID=A0A3C1M4H6_9CYAN) HSP 1 Score: 86.7 bits (213), Expect = 3.900e-15 Identity = 74/248 (29.84%), Postives = 117/248 (47.18%), Query Frame = 3
Query: 498 LFYSSLLRWQASALQVGLGLDRLCVP----RRMDTVCNPDKQSRVRNLVYAG--ERVRKVRMSYLDTPD-MQVYSSVAYSAPGHDFPLLSLSAMAM-GSHVRVIAIDLQPLFPGAEYAAKYAA-ANAKLKAIRQKYPQMGQELLRDY-YKGSPFFSDNMMYARWGPEEEASGFMEKVVMPAFQECIQVYVDIVNNAPAQTPGSPTEQAVLERQAEFDRFHSEREQVRPVLTSNFGASFAETYVSEFLF 1211
+ Y+ L W + L+ LGL +P ++ TV + V Y ++R++R + +D +QV + V +D P + + G H+ IAIDLQPLFP A+Y A+Y A A A + R+ P G D+ + PFFS ++ R A+ +E V AFQE +QVY+D+V A TP +L Q + + + ++ R +LT +G + E Y+ FLF
Sbjct: 1 MIYTKFLEWAIARLESELGLQPYPIPEGFAQKTATVKRGKESGEVTTTSYGACHAKLRQIRAAAVDGGTALQVLNFVISPHWDYDLPFFGADLVTLPGGHL--IAIDLQPLFPDADYRARYGAPALAVWERYREALPWGG-----DFPEEAKPFFSPAFLWTR----PTATEVVETTVFAAFQEYLQVYMDLVK---AATPVPNRRADILAAQHRYQAYRAVKDPARGMLTRFYGEEWTERYIHGFLF 234 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1285.2375.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1285.2375.1 >prot_H-canaliculatus_F_contig1285.2375.1 ID=prot_H-canaliculatus_F_contig1285.2375.1|Name=mRNA_H-canaliculatus_F_contig1285.2375.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=374bp MGCPFAQLSPILLLSCLVLFFQFGASFFSPKPLLASLQRGRSLTDASAGGback to top mRNA from alignment at H-canaliculatus_F_contig1285:6770..15411- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1285.2375.1 ID=mRNA_H-canaliculatus_F_contig1285.2375.1|Name=mRNA_H-canaliculatus_F_contig1285.2375.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=8642bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1285:6770..15411- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1285:6770..15411- >mRNA_H-canaliculatus_F_contig1285.2375.1 ID=mRNA_H-canaliculatus_F_contig1285.2375.1|Name=mRNA_H-canaliculatus_F_contig1285.2375.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2244bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1285:6770..15411- (Hapterophycus canaliculatus Oshoro5f female)back to top |