mRNA_H-canaliculatus_F_contig12847.2372.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12847.2372.1 vs. uniprot
Match: D7G7N0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N0_ECTSI) HSP 1 Score: 304 bits (778), Expect = 1.340e-101 Identity = 143/161 (88.82%), Postives = 149/161 (92.55%), Query Frame = 1
Query: 1 GVSIGRAGARESEVARRVRMFWRSLGPNSEAPVYGADTLGTLFSEEDNDSWNVGKLDTILQLLKANLPGITTAMLYAGMWRSMFAFHVEDVNLYSINYLHRGDPKSWYGIPPDSRQRFESLAQAFFTEEFRACKEHMRHKTTMISPLQIQRAGIAYCTAVQ 483
G G + ESEVARRVRMFWRSLGPNSEAPVYGADTLGTLF+E+DND+WNVG+LDTILQLLKANLPGITT MLYAGMWRSMFAFHVEDVNLYSINYLHRGDPKSWYGIPP SRQRFESLAQAFFTEEFR CK HMRHKTTMISPLQIQ+AGI YCTAVQ
Sbjct: 174 GTQAGSSRTEESEVARRVRMFWRSLGPNSEAPVYGADTLGTLFAEDDNDAWNVGRLDTILQLLKANLPGITTPMLYAGMWRSMFAFHVEDVNLYSINYLHRGDPKSWYGIPPGSRQRFESLAQAFFTEEFRTCKHHMRHKTTMISPLQIQKAGIGYCTAVQ 334
BLAST of mRNA_H-canaliculatus_F_contig12847.2372.1 vs. uniprot
Match: A0A6H5LNC5_9PHAE (JmjC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNC5_9PHAE) HSP 1 Score: 219 bits (558), Expect = 3.880e-63 Identity = 103/121 (85.12%), Postives = 109/121 (90.08%), Query Frame = 1
Query: 1 GVSIGRAGARESEVARRVRMFWRSLGPNSEAPVYGADTLGTLFSEEDNDSWNVGKLDTILQLLKANLPGITTAMLYAGMWRSMFAFHVEDVNLYSINYLHRGDPKSWYGIPPDSRQRFESL 363
G G + ESEVARRVRMFWRSLGPNSEAPVYGADTLGTLF+ +DND+WNVG+LDTILQLLKANLPGITT MLYAGMWRSMFAFHVEDVNLYSINYLHRGDPKSWYGIPP SRQR S+
Sbjct: 88 GTPAGSSRGEESEVARRVRMFWRSLGPNSEAPVYGADTLGTLFAGDDNDAWNVGRLDTILQLLKANLPGITTPMLYAGMWRSMFAFHVEDVNLYSINYLHRGDPKSWYGIPPGSRQRPHSV 208
BLAST of mRNA_H-canaliculatus_F_contig12847.2372.1 vs. uniprot
Match: W7TED2_9STRA (Lysine-specific demethylase 4c isoform 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TED2_9STRA) HSP 1 Score: 185 bits (470), Expect = 1.960e-51 Identity = 83/143 (58.04%), Postives = 110/143 (76.92%), Query Frame = 1
Query: 55 RMFWRSLGPNSEAPVYGADTLGTLFSEEDNDSWNVGKLDTILQLLKANLPGITTAMLYAGMWRSMFAFHVEDVNLYSINYLHRGDPKSWYGIPPDSRQRFESLAQAFFTEEFRACKEHMRHKTTMISPLQIQRAGIAYCTAVQ 483
R+FWRS+GP + P+YGAD G+LF + + WN+ +LD +++LL +NLPGITTAMLY GMWR+MFAFH ED+NLYSINYLH G PKSWY IPP +++RFESLAQ+ + FR C E +RHKT++ SP ++ +GI + T VQ
Sbjct: 113 RLFWRSMGPLAPPPLYGADMSGSLFRDRAS-GWNLSELDNMIKLLPSNLPGITTAMLYFGMWRAMFAFHTEDMNLYSINYLHAGRPKSWYSIPPHAQRRFESLAQSLNPQGFRTCSEFLRHKTSIFSPKVLRESGIPFHTLVQ 254
BLAST of mRNA_H-canaliculatus_F_contig12847.2372.1 vs. uniprot
Match: A0A3M6VIC7_9STRA (JmjC domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VIC7_9STRA) HSP 1 Score: 171 bits (434), Expect = 1.210e-47 Identity = 76/143 (53.15%), Postives = 102/143 (71.33%), Query Frame = 1
Query: 55 RMFWRSLGPNSEAPVYGADTLGTLFSEEDNDSWNVGKLDTILQLLKANLPGITTAMLYAGMWRSMFAFHVEDVNLYSINYLHRGDPKSWYGIPPDSRQRFESLAQAFFTEEFRACKEHMRHKTTMISPLQIQRAGIAYCTAVQ 483
R FW+ L + PVYGAD +G+LF E D SWN+ L+TIL+ K +LPGIT AMLY GMWR+MFAFH ED++LYSINY+H G PK WYG+PPD+ + E AQ+ F E+F C + +RHKT++ISP +++ G+ + A Q
Sbjct: 141 RKFWKGLRGTMDPPVYGADIVGSLFGETDTTSWNLNGLNTILR--KIDLPGITQAMLYFGMWRAMFAFHTEDMDLYSINYVHTGKPKFWYGVPPDAAPQLERAAQSMFPEKFHECHQFLRHKTSLISPARLREFGVPFYRAYQ 281
BLAST of mRNA_H-canaliculatus_F_contig12847.2372.1 vs. uniprot
Match: A0A6G0WAD3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WAD3_9STRA) HSP 1 Score: 167 bits (424), Expect = 8.070e-47 Identity = 76/143 (53.15%), Postives = 96/143 (67.13%), Query Frame = 1
Query: 55 RMFWRSLGPNSEAPVYGADTLGTLFSEEDNDSWNVGKLDTILQLLKANLPGITTAMLYAGMWRSMFAFHVEDVNLYSINYLHRGDPKSWYGIPPDSRQRFESLAQAFFTEEFRACKEHMRHKTTMISPLQIQRAGIAYCTAVQ 483
R FW+ L P E P YGAD +G+LF +E SWNV KLD+IL+ +LPGIT AMLY GMW ++FA H ED+ LYSIN+LH G PK WY IPP R E + Q F +E+ C + +RHKT++ISP ++Q I Y TAVQ
Sbjct: 113 RKFWKGLRPTMEPPTYGADIVGSLFGDEHAMSWNVNKLDSILR--SVDLPGITQAMLYFGMWSAIFALHTEDMELYSINFLHTGKPKVWYAIPPQQASRVERICQTMFPDEYMTCHQFLRHKTSLISPSKLQEFDIPYTTAVQ 253
BLAST of mRNA_H-canaliculatus_F_contig12847.2372.1 vs. uniprot
Match: A0A067CN99_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CN99_SAPPC) HSP 1 Score: 160 bits (406), Expect = 5.950e-46 Identity = 72/144 (50.00%), Postives = 100/144 (69.44%), Query Frame = 1
Query: 55 RMFWRSLGPNSEAPVYGADTLGTLFSEE-DNDSWNVGKLDTILQLLKANLPGITTAMLYAGMWRSMFAFHVEDVNLYSINYLHRGDPKSWYGIPPDSRQRFESLAQAFFTEEFRACKEHMRHKTTMISPLQIQRAGIAYCTAVQ 483
R FW+ L P E PVYGAD +G+LF ++ ++ WNV LDTIL+ +LPG+T AMLY GMWR+MFA H ED++LYSIN+LH G PK WYGIPP S + E +AQ+ F E+ C + +RHKT++I+P +++ + + VQ
Sbjct: 109 RTFWKGLRPTMEPPVYGADLVGSLFQDDAKSNPWNVNNLDTILR--SVDLPGVTQAMLYFGMWRAMFALHTEDMDLYSINFLHTGRPKFWYGIPPQSAAKLERVAQSLFPEKDMTCHQFLRHKTSLIAPSKLREHSVPFVKVVQ 250
BLAST of mRNA_H-canaliculatus_F_contig12847.2372.1 vs. uniprot
Match: A0A485KL37_9STRA (Aste57867_8758 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KL37_9STRA) HSP 1 Score: 165 bits (418), Expect = 9.980e-46 Identity = 73/143 (51.05%), Postives = 97/143 (67.83%), Query Frame = 1
Query: 55 RMFWRSLGPNSEAPVYGADTLGTLFSEEDNDSWNVGKLDTILQLLKANLPGITTAMLYAGMWRSMFAFHVEDVNLYSINYLHRGDPKSWYGIPPDSRQRFESLAQAFFTEEFRACKEHMRHKTTMISPLQIQRAGIAYCTAVQ 483
R FW+ L P + P YGAD +G+ F ++ SWNV KLDTIL+ + +LPGIT AMLY GMW ++FA H ED+ LYSIN+LH G PK WY +PP R E + Q F +E+ AC++ +RHKT++ISP ++ I YC AVQ
Sbjct: 112 RKFWKGLRPTMDPPTYGADVVGSFFGDDPAMSWNVNKLDTILRTV--DLPGITQAMLYFGMWSAIFAMHTEDMELYSINFLHTGKPKIWYTVPPQHAARVERICQTMFPDEYMACQQFLRHKTSLISPSKMHEFDIPYCKAVQ 252
BLAST of mRNA_H-canaliculatus_F_contig12847.2372.1 vs. uniprot
Match: A0A1V9ZIF9_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZIF9_9STRA) HSP 1 Score: 162 bits (410), Expect = 7.110e-45 Identity = 75/150 (50.00%), Postives = 101/150 (67.33%), Query Frame = 1
Query: 37 EVARRVRMFWRSLGPNSEAPVYGADTLGTLFSEEDNDSWNVGKLDTILQLLKANLPGITTAMLYAGMWRSMFAFHVEDVNLYSINYLHRGDPKSWYGIPPDSRQRFESLAQAFFTEEFRACKEHMRHKTTMISPLQIQRAGIA-YCTAVQ 483
+V R FW+ L P + PVYGAD +G+LF + + WNV LDTIL+ NLPG+T AMLY GMWR++FA H ED++LYSINYLH G PK WYGIPP R E +AQ+ F E+ C++ +RHKT++I+P +++ + Y AVQ
Sbjct: 100 DVNEAERAFWKGLRPTMDPPVYGADLVGSLFDANEPNPWNVNDLDTILR--SVNLPGVTQAMLYFGMWRAIFAMHTEDMDLYSINYLHTGRPKLWYGIPPQDGPRLERVAQSLFPEKDMQCRQFLRHKTSLIAPSKLREHSVPFYKVAVQ 247
BLAST of mRNA_H-canaliculatus_F_contig12847.2372.1 vs. uniprot
Match: A0A6A3RU45_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3RU45_9STRA) HSP 1 Score: 164 bits (414), Expect = 7.460e-45 Identity = 75/149 (50.34%), Postives = 104/149 (69.80%), Query Frame = 1
Query: 37 EVARRVRMFWRSLGPNSEAPVYGADTLGTLFSEEDNDSWNVGKLDTILQLLKANLPGITTAMLYAGMWRSMFAFHVEDVNLYSINYLHRGDPKSWYGIPPDSRQRFESLAQAFFTEEFRACKEHMRHKTTMISPLQIQRAGIAYCTAVQ 483
EV RR FW+ L + PVYGAD + +LF + D SWN+ L+TIL+ K +LPG+T +MLY GMWR+MFAFH ED++LYSINY+H G PK WYG+PPD+ + E AQ+ F E+ AC + +RHKT++ISP +++ G+ + A Q
Sbjct: 125 EVERR---FWKGLRGTMDPPVYGADIVTSLFGDADALSWNLNDLNTILR--KIDLPGVTQSMLYFGMWRAMFAFHTEDMDLYSINYVHTGKPKFWYGVPPDAAPQLERAAQSMFPEKHHACSQFLRHKTSLISPARLREFGVPFYRAYQ 268
BLAST of mRNA_H-canaliculatus_F_contig12847.2372.1 vs. uniprot
Match: A0A7S2N1K5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N1K5_9STRA) HSP 1 Score: 165 bits (417), Expect = 1.450e-44 Identity = 81/155 (52.26%), Postives = 99/155 (63.87%), Query Frame = 1
Query: 55 RMFWRSLGPNSEAPVYGADTLGTLFSEEDNDSWNVGKLDTILQLLKAN------------LPGITTAMLYAGMWRSMFAFHVEDVNLYSINYLHRGDPKSWYGIPPDSRQRFESLAQAFFTEEFRACKEHMRHKTTMISPLQIQRAGIAYCTAVQ 483
R FWR LGP EA +YGAD GTLF D WNV +L++ LQLLKA+ LPG+TTA LY GMW S+FA H ED+NL SINYLH G PK WY I P+ QRFESLA + F AC E +RHK ++SP +++AGI + T +Q
Sbjct: 291 RKFWRRLGPTMEASMYGADMEGTLFQGADACGWNVDRLESCLQLLKADVDDGSSNDDSLSLPGVTTAYLYVGMWASVFAAHTEDMNLLSINYLHAGAPKYWYSIDPEDSQRFESLAASHFGSAASACPEFLRHKRYLVSPTLLKKAGIQFRTLIQ 445 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12847.2372.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12847.2372.1 >prot_H-canaliculatus_F_contig12847.2372.1 ID=prot_H-canaliculatus_F_contig12847.2372.1|Name=mRNA_H-canaliculatus_F_contig12847.2372.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=161bp GVSIGRAGARESEVARRVRMFWRSLGPNSEAPVYGADTLGTLFSEEDNDSback to top mRNA from alignment at H-canaliculatus_F_contig12847:850..2221- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12847.2372.1 ID=mRNA_H-canaliculatus_F_contig12847.2372.1|Name=mRNA_H-canaliculatus_F_contig12847.2372.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1372bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12847:850..2221- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12847:850..2221- >mRNA_H-canaliculatus_F_contig12847.2372.1 ID=mRNA_H-canaliculatus_F_contig12847.2372.1|Name=mRNA_H-canaliculatus_F_contig12847.2372.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=966bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12847:850..2221- (Hapterophycus canaliculatus Oshoro5f female)back to top |