mRNA_H-canaliculatus_F_contig1284.2366.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1284.2366.1
Unique NamemRNA_H-canaliculatus_F_contig1284.2366.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1284.2366.1 vs. uniprot
Match: A0A6H5KK84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK84_9PHAE)

HSP 1 Score: 748 bits (1930), Expect = 4.540e-254
Identity = 438/682 (64.22%), Postives = 491/682 (71.99%), Query Frame = 1
Query:  400 KYLEPFRAELVSLLMKLLADESEAVCEQAGGLIEEVGEVWARSSAEAXXXXXXXXXXXXXXXXXXXXXXXXPGCPQQQPSPTVPPLPP-PTRSPATAVAPAENGTSLKAVPAAAARALCSSLLPLTMPAAIDEASHWTVRGRRRALRLMCFLVR----------------------DDESEVRQAVDECASAVGEASIDLAAVLDVLLPVLRGEISGECGEKHLTQALAVLAPVVSAAAATRPRA-LAPHVAAVCAALCGKGLLGVDPSSSSSVDGGGEELWEAGLEACRAVVDTGLGEELRRPQVRLDLLRALLWLLAGSDAGXXXXXXXXXXXXXXTSDAREEVLEIASQLAAHQGDGD---ASQGQGAQDLFTRHFTDLLAYVVGGDSSEEDNGGG----------------WSKGSRLRTGFEALLWSVPGAVGSHLGEVMPIFRELLHDPTRDPELRLNMLALLECVVRQDEVTEESMRPYAEVVLREMVLPNAVWRAGLVAATVRKMTIAVLCTSLRGNKIGVEAVYATAQQLLPVLKTNLEDHEATTRKMTCLSLKMMFQMMPGALGEEPVRLMYPELLKRLDDSNDVVRLAVCDTIAAFFRATAPQNVRGSVLNYSSEQLLVHLDDQDESMQRAVFSVMEVAIAIDPESVKKLASDARSSHRTPDLCDRLVDLC 2316
            KYLEP RAEL+SLLMKLLADESE V  +AG  +E +GE W RSS                               QQ  SP VPPLP  P  +PA    PA          AAA RALC SLLP  MPAAI+EASHWTVRGRRRAL L+CFLVR                      DDE+EVRQAVDECA+A+GEA+IDL AV D+LLPVLRGE+SGE   KHL QALAVL PV+SAAAA RP   LAPH+  VCAALCG+GLL VDPS+    DG   ELWEA L ACRA V TGLG+ELRRP+VRLDLLRALLWLLAGS+AG                 A+EEVLEIASQLAAHQ       +S+  GAQ LF RHFTDLLA VVG  ++  + GG                     SR R GFEALL S P AVG HLGEVMPIFR LLHD TR+PE+RL+MLALLECVV+ D VTEES+RP+AE +L+EMVLPNAVWRAGLVAATVRK+ IAVL T+LRGNKIGVEAVYA+A+Q+LPVLKTNLEDHEATTR+MTCLSL+MMF+M+PGALG+EPVRL+YPELLKRLDDSND VR+AVC T AAFFRAT PQNVRG+VL Y SEQLLVHLDDQDE+MQRAVF+VMEVA AIDP++V+KLAS+ARSSHRTP  CDRLV LC
Sbjct:   49 KYLEPHRAELLSLLMKLLADESEPVRGEAGRALEGLGEAWDRSSDNPSAASTEQEQ-------------------QQNCSPPVPPLPTDPGITPARTTPPARPA-------AAAVRALCVSLLPSMMPAAIEEASHWTVRGRRRALWLLCFLVRYAGHEVTPYLPQLLASLGEASRDDEAEVRQAVDECAAAIGEAAIDLGAVTDILLPVLRGEVSGE-SNKHLAQALAVLTPVLSAAAAARPEVELAPHLGPVCAALCGRGLLDVDPSA----DG---ELWEAELTACRAAVGTGLGDELRRPRVRLDLLRALLWLLAGSEAGAGDGGGVDAGA------AKEEVLEIASQLAAHQDSSSPSSSSRQDGAQGLFARHFTDLLACVVGDAAAFGETGGAAXXXXXXXXXXXXXXXXXXXSRRRGGFEALLRSAPRAVGEHLGEVMPIFRGLLHDATREPEVRLSMLALLECVVKHDGVTEESLRPHAETMLKEMVLPNAVWRAGLVAATVRKVAIAVLYTALRGNKIGVEAVYASAEQVLPVLKTNLEDHEATTRQMTCLSLEMMFRMIPGALGDEPVRLIYPELLKRLDDSNDTVRMAVCGTTAAFFRATPPQNVRGTVLQYMSEQLLVHLDDQDEAMQRAVFAVMEVAAAIDPKTVEKLASEARSSHRTPSYCDRLVALC 690          
BLAST of mRNA_H-canaliculatus_F_contig1284.2366.1 vs. uniprot
Match: D7FI57_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI57_ECTSI)

HSP 1 Score: 658 bits (1697), Expect = 1.950e-216
Identity = 466/797 (58.47%), Postives = 518/797 (64.99%), Query Frame = 1
Query:    1 QALGALLLCGSDDLDKPLRELILPQFGNLLYDRTVAVRRELAEVLAALVEAGFPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEAASDRGTAGTGTEGEGGAKRTAKRNVERKNKYLEPFRAELVSLLMKLLADESEAVCEQAGGLIEEVGEVWARSSAEAXXXXXXXXXXXXXXXXXXXXXXXXPGCPQQQPSPTVPPLPPPTRSPATAVAPAENGTSLKAVPAAAARALCSSLLPLTMPAAIDEASHWTVRGRRRALRLMCFLVRDDESEVRQAVDECASAVGEASIDLAAVLDVLLPVLRGEISGECGEKHLTQALAVLAPVVSAAAATRPRALAPHVAAVCAALCGKGLLGVDPSSSSSVDGGGEELWEAGLEACRAVVDTGLGEELRRPQVRLDLLRALLWLLAGSDAGXXXXXXXXXXXXXXTSDAREEVLEIASQLAAHQGDGDAS----QGQGAQDLFTRHFTDLLAYVVGGDSSEEDNGG------------GWSKGSRLRTGFEALLWSVPGAVGSHLGEVMPIFRELLHDPTRDPELRLNMLALLECVVRQDEVTEESMRPYAEVVLREMVLPNAVWRAGLVAATVRKMTIAVLCTSLRGNKIGVEAVYATAQQLLPVLKTNLEDHEATTRKMTCLSLKMMFQMMPGALGEEPVRLMYPELLKRLDDSNDVVRLAVCDTIAAFFRATAPQNVRGSVLNYSSEQLLVHLDDQDESMQRAVFSVMEVAIAIDPESVKKLASDARSSHRTPDLCDRLVDLCRPG*RTSRA 2343
            QALGALLLCGSDDLDKPLRELILPQ  NLLYDRTVAVRREL  VLA+LV AGFP  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                            ++K KYLEP RAEL+SLLMKLLADESE V   AG  +E +GE WARSS           XX                   Q  SP VP L                          A RALC  LLP  MPAAI+EASHWTVRGRRRAL+L+CFL++DDE EVRQAVDECA+A+GEA+IDL AV D+LLPVLRGE                                                                                              LLRALLWLLAGS+AG    XXXXXX       A+EEVLEIASQLAAHQG         + +GAQ LF RHFTDLLA VVG  ++  +  G            GW KGSR R GFEALL S P AVG HLGEVMPIFR LLHD TR+PE+RL+MLALLECVV+ D VTEES+RP+AE +L+EMVLPNAVWRAGLVAA VRK+ IAVL T+LRGNKIGVEAVYA+A+Q+LPVLKTNLEDHEATTR++TCLSL+MMF+M+PGALG+EPVRL+YPELLKRLDDSND VR+AVC TIAAF RATAPQNVRG+VL Y +EQLLVHLDDQDE+MQRAVF+VMEVA AIDP++V+KLAS+ARSSHRTP  CDRLV LC      SR+
Sbjct:  225 QALGALLLCGSDDLDKPLRELILPQLRNLLYDRTVAVRRELVAVLASLVAAGFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXRTKQKKKYLEPHRAELLSLLMKLLADESEPVRGGAGRALEGLGEAWARSSDNPSAATTEQQXX-------------------QNCSPPVPXLX------XXXXXXXXXXXXXXXXXXXAVRALCVPLLPSMMPAAIEEASHWTVRGRRRALQLLCFLLQDDEVEVRQAVDECAAAIGEAAIDLGAVTDILLPVLRGE----------------------------------------------------------------------------------------------LLRALLWLLAGSEAGAGDGXXXXXXA------AKEEVLEIASQLAAHQGSXXXXXXXRREEGAQGLFARHFTDLLACVVGDAAAVGETAGAAXXXXXXXXDAGWGKGSRRRGGFEALLRSAPRAVGEHLGEVMPIFRGLLHDATREPEVRLSMLALLECVVKHDGVTEESLRPHAETLLKEMVLPNAVWRAGLVAAPVRKVAIAVLYTALRGNKIGVEAVYASAEQVLPVLKTNLEDHEATTRQITCLSLEMMFRMIPGALGDEPVRLIYPELLKRLDDSNDTVRMAVCGTIAAFLRATAPQNVRGTVLQYMAEQLLVHLDDQDEAMQRAVFAVMEVAAAIDPKTVEKLASEARSSHRTPSYCDRLVALCSSSSSASRS 892          
BLAST of mRNA_H-canaliculatus_F_contig1284.2366.1 vs. uniprot
Match: A0A225WPQ1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WPQ1_9STRA)

HSP 1 Score: 247 bits (630), Expect = 1.610e-64
Identity = 175/554 (31.59%), Postives = 286/554 (51.62%), Query Frame = 1
Query:  727 PAAAARALCSSLLPLTMPAAIDEASHWTVRGRRRALR--LMCFLV---------------------RDDESEVRQAVDECASAVGEASIDLAAVLDVLLPVLRGEISGECGEKHLTQALAVLAPVVSAAAATRPRALAPHVAAVCAALCGKGLLGVDPSSSSSVDGGGEELWEAGLEACRAVVDTGLGEELRRPQVRLDLLRALLWLLAGSDAGXXXXXXXXXXXXXXTSDAREEVLEIASQLAAHQGDGDASQGQGAQDLFTRHFTDLL-AYVVGGDSSEEDNGGGWSKGSRLRTGFEALLWSVPGAVGSHLGEVMPIFRELLH-DPTRDPELRLNMLALLECVVRQDEVTEESMRPYAEVVLREMVLPNAVWRAGLVAATVRKMTIAVLCTSLRGNKIGVEAVYATAQQLLPVLKTNLEDHEATTRKMTCLSLKMMFQMMPGALGEEPVRLMYPELLKRLDDSNDVVRLAVCDTIAAFFRATAPQNVRGSVLNYSSEQLLVHLDDQDESMQRAVFSVMEVAIAIDPESVKKLASDARSSHRTPDLCDRLVDL 2313
            P   AR L +S+    +P  +D+   WTV+  R      L  +L+                     RDDE  V  +V  C+S VG  + D   +L  LLP++ G ++G+   +H T  L +L   +    +   + +  H+  +  ALC  GL        S V    ++L  AG+ A  ++V T      ++ ++   L   L  LLA S                    A E + E+A+++            Q  Q L+ R+ + LL A  +  D++       W K +  R  F++L      A G +L  ++P+F  L+H +P +D ++RL  LALLE ++  D +++ + +P++  +L++ ++PN VWR G VAAT+RK+ +A   T LR +      ++ TA Q+LPVLK++++D++A TR++ CL+L+ +F  +PG LGEEPV  +Y E+LKRLDDSND VR A C T   F RA   ++ RG++++Y+ + L VHLDD +  +Q AVF V++  +AID   + K A + R  H++P  CD+L+ L
Sbjct:  348 PPLGARKLAASIRAQVLPPLLDQTRDWTVQVLRERYTQILSAYLILLEQNMNPFLDKIFAALGKNCRDDEEVVYNSVKACSSIVGFYA-DSQMILASLLPMVAGRLAGQDTAQHRTNGLILLGMSIEGMTS---KTIGSHLDLITEALCDAGL------RESEVADLQDQL--AGVIA--SIVKTAGSLLAQQDEICFRLFWVLNHLLASSSESSIADET-----------ASESIEELATKME-----------QPVQGLYVRYMSKLLDAMTLPSDATTS-----WEKSNPSRVLFDSLCRRGRAACGENLNRIVPVF--LVHLEPAQDADVRLAFLALLETMLGTDAISQ-AFKPFSVGLLQKAIIPNIVWRGGRVAATIRKVAVACAYTLLRQDIADHPCLFETAPQMLPVLKSSMDDNDAKTRQLVCLALQYLFVALPGCLGEEPVHQLYAEILKRLDDSNDTVRKAACQTFTTFLRAAPKEHFRGTIIDYTLDCLFVHLDDSEPDIQEAVFEVLKGTVAIDAPRLAKKAEENRIRHQSPRYCDQLLAL 857          
BLAST of mRNA_H-canaliculatus_F_contig1284.2366.1 vs. uniprot
Match: A0A2P4XB74_9STRA (Uncharacterized protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XB74_9STRA)

HSP 1 Score: 243 bits (621), Expect = 2.290e-63
Identity = 175/552 (31.70%), Postives = 283/552 (51.27%), Query Frame = 1
Query:  727 PAAAARALCSSLLPLTMPAAIDEASHWTVRGRRRALRLM-CFLV---------------------RDDESEVRQAVDECASAVGEASIDLAAVLDVLLPVLRGEISGECGEKHLTQALAVLAPVVSAAAATRPRALAPHVAAVCAALCGKGLLGVDPSSSSSVDGGGEELWEAGLEACRAVVDTGLGEELRRPQVRLDLLRALLWLLAGSDAGXXXXXXXXXXXXXXTSDAREEVLEIASQLAAHQGDGDASQGQGAQDLFTRHFTDLLAYVVGGDSSEEDNGGGWSKGSRLRTGFEALLWSVPGAVGSHLGEVMPIFRELLH-DPTRDPELRLNMLALLECVVRQDEVTEESMRPYAEVVLREMVLPNAVWRAGLVAATVRKMTIAVLCTSLRGNKIGVEAVYATAQQLLPVLKTNLEDHEATTRKMTCLSLKMMFQMMPGALGEEPVRLMYPELLKRLDDSNDVVRLAVCDTIAAFFRATAPQNVRGSVLNYSSEQLLVHLDDQDESMQRAVFSVMEVAIAIDPESVKKLASDARSSHRTPDLCDRLVDL 2313
            P   AR L +S+    +P  ++    WTV+ R R  +++  +LV                     RDDE  V  +V  C+  VG  + D   +L  LLP++ G ++G+   +H T  L +L   +   A    + +  H+  +  ALC  GL        S V    ++L  AG+ A   +V T      ++ ++   L   L  LLA S                 +S A E   E   +LAA+        GQ  Q L+ R+   LL  +        D    W K +  R  F++L      A G +LG+++P+   L+H +P +D ++RL+ LALLE ++  D +++ + + ++  +L++ ++PN VWR G VAAT+RK+ +A   T LR        ++ TA Q+LPVLK++++D +A TR++ CL+L+ +F  +PG LGEEPV  +Y E+LKRLDDSND VR A C T   F +A   ++ RG++++Y+ + L VHLDD +  +Q AVF V++  ++ID   + K A + R+ H +P  CD+L+ L
Sbjct:  348 PPLGARKLAASIKAQVLPLLLERTGDWTVQVRERYTQVLSAYLVLLEQNMNPFLDKVFAALGRNCRDDEEVVYNSVKACSGVVGFYA-DSQMILASLLPMVAGRLAGQDTAQHRTNGLILLGMSIGGMAT---KTIETHLDLITEALCDAGL------RESEVPDLQDQL--AGVVA--NIVKTAGSLLTQKDEICFRLFWVLNHLLASSSE---------------SSVAYESARESLEELAAN-------VGQTVQGLYIRYMGKLLDTMT----LPSDATASWEKNNPNRVLFDSLCRRGGVACGENLGKIVPVL--LVHLEPEQDADVRLSFLALLETMLGTDAISQ-AFKTFSVGLLQKAIIPNIVWRGGRVAATIRKVAVACAYTLLRQGIADHPCLFETAPQMLPVLKSSMDDSDAKTRQLVCLALQYLFVALPGCLGEEPVHQLYAEILKRLDDSNDTVRKAACQTFITFLKAAPKEHFRGTIIDYTLDCLFVHLDDLEVDIQEAVFDVLKETVSIDAPRLAKKAEENRTRHHSPRYCDQLLAL 856          
BLAST of mRNA_H-canaliculatus_F_contig1284.2366.1 vs. uniprot
Match: A0A5D6XR59_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XR59_9STRA)

HSP 1 Score: 243 bits (620), Expect = 2.690e-63
Identity = 175/539 (32.47%), Postives = 270/539 (50.09%), Query Frame = 1
Query:  775 MPAAIDEASHWTVRGRRRALRLMC-FLV---------------------RDDESEVRQAVDECASAVGEASIDLAAVLDVLLPVLRGEISGECGEKHLTQALAVLAPVVSAAAATRPRALAPHVAAVCAALCGKGLLGVDPSSSSSVDGGGEELWEAGLEACRAVVDTGLGEELRRPQVRLDLLRALLWLLAGSDAGXXXXXXXXXXXXXXTSDAREEVLEIASQLAAH---QGDGDASQGQGAQDLFTRHFTDLLAYVVGGDSSEEDNGGGWSKGSRLRTGFEALLWSVPGAVGSHLGEVMPIFRELLH-DPTRDPELRLNMLALLECVVRQDEVTEESMRPYAEVVLREMVLPNAVWRAGLVAATVRKMTIAVLCTSLRGNKIGVEAVYATAQQLLPVLKTNLEDHEATTRKMTCLSLKMMFQMMPGALGEEPVRLMYPELLKRLDDSNDVVRLAVCDTIAAFFRATAPQNVRGSVLNYSSEQLLVHLDDQDESMQRAVFSVMEVAIAIDPESVKKLASDARSSHRTPDLCDRLVDL 2313
            +PA +++ S WTV+ R R  +++  FLV                     RDDE  V   V EC++ VG  + D   +L  LLP+  G ++G+   +H T  L +L   +   +    + + PH+  +  ALC  GL       S + D     L +       +VV T       + ++   L   L  LLA S                 +S A E      S LA+      DG          L+ R+ + +L  +        D    W K    R  F++L      A G +L  ++P    L+H + +RD ++RL  LALLE ++  D + + S RP++  +L   ++PN VW+ G VAAT+RK+ +A + T LR        ++ TA ++LPVLK++++D +A TR++ CL+L+ +F  +PG LGEEPV  +Y E+LKRLDDSND VR A C T + F RA   ++ RG++++YS + L VHLDD D S+Q AV  V++ AI +D   V K A + RS H++P LCD ++ L
Sbjct:  357 LPALLEKTSDWTVQVRERYTKILSVFLVLLESSMNSFLDKIFAALARICRDDEESVVLGVKECSAVVGFYA-DSQMILASLLPMAAGRLAGQDTAQHRTSGLILLGMSIGGMSL---KTIEPHLELITEALCDAGL-----RESEAAD-----LQDQLAGVVASVVTTAGPLLAHKREISFRLFWVLSHLLASS---------------AESSVAHETATAALSDLASKCELTVDG----------LYLRYMSSILDKMA----LPTDAASSWKKSEPSRVLFDSLCRRGGAACGENLDRLVPAL--LVHLEASRDADVRLAFLALLETMLGTDSIFQ-SFRPFSTPLLLNGIIPNIVWQGGRVAATIRKVAVACVYTLLRQGLADQPCLFETAPKMLPVLKSSMDDSDAKTRQLVCLALQYLFVALPGCLGEEPVHQLYAEILKRLDDSNDTVRKAACQTFSTFLRAAPKEHFRGTIIDYSLDCLFVHLDDSDASIQAAVLDVLKAAIEVDKPLVAKKAQENRSRHQSPTLCDEILAL 849          
BLAST of mRNA_H-canaliculatus_F_contig1284.2366.1 vs. uniprot
Match: W2PQ39_PHYPN (Uncharacterized protein n=43 Tax=Phytophthora TaxID=4783 RepID=W2PQ39_PHYPN)

HSP 1 Score: 242 bits (617), Expect = 9.930e-63
Identity = 174/566 (30.74%), Postives = 286/566 (50.53%), Query Frame = 1
Query:  727 PAAAARALCSSLLPLTMPAAIDEASHWTVRGRRRALRLM-CFLV---------------------RDDESEVRQAVDECASAVGEASIDLAAVLDVLLPVLRGEISGECGEKHLTQALAVLAPVVSAAAATRPRALAPHVAAVCAALCGKGLLGVDPSSSSSVDGGGEELWEAGLEACRAVVDTGLGEELRRPQVRLDLLRALLWLLAGSDAGXXXXXXXXXXXXXXTSDAREEVLEIASQLAAHQG-DGDASQGQGAQDLFTRHFTDLLAY-------------VVGGDSSEEDNGGGWSKGSRLRTGFEALLWSVPGAVGSHLGEVMPIFRELLH-DPTRDPELRLNMLALLECVVRQDEVTEESMRPYAEVVLREMVLPNAVWRAGLVAATVRKMTIAVLCTSLRGNKIGVEAVYATAQQLLPVLKTNLEDHEATTRKMTCLSLKMMFQMMPGALGEEPVRLMYPELLKRLDDSNDVVRLAVCDTIAAFFRATAPQNVRGSVLNYSSEQLLVHLDDQDESMQRAVFSVMEVAIAIDPESVKKLASDARSSHRTPDLCDRLVDL 2313
            P   AR L +SL    +P  +++   WTV+ R R  +++  +L+                     RDDE  V  +V  C   VG  + D   +L  LLP++ G ++G+   +H T  L +L   +        + +  H+  +  ALC  GL        S V    ++L  AG+ +  ++V T      ++ ++   L   L  LLA S                 +S A E   E   +LAA      +     G +   T HF+   ++             ++   +   D  G W K    R  F+++      A G +LG+++PI   L+H +P +D ++RL  LALLE ++  D +++ + +P++  +L++ ++PN VWR G VAAT+RK+ +A   T LR    G + ++ TA Q+LPVLK++++D +A TR++ CL+L+ +F  +PG LGEEPV  +Y E+LKRLDDSND VR A C T   F +A   ++ RG++++Y+ + L VHLDD +  +Q AVF V++  I ID   + K A + R+ H++P  CD+L+ L
Sbjct:  348 PPLGARKLAASLQAQVLPQLLEKTGDWTVQVRERYTQVLSAYLILLEQNMNPFLDKVFAALGNICRDDEVVVYNSVKACLGVVGFYA-DSQMILASLLPMVAGRLAGQDTAQHRTNGLILLGMSIEG---MTTKTIGAHLELITEALCDAGL------RESEVSDLQDQL--AGVVS--SIVKTAGPLLAQKDEIGFRLFWVLNHLLASSSE---------------SSVAFEMATESMEELAAEMELPAEVCYCPGTKVGLTMHFSFCFSWSCLQVLYARYMGKLLDTMTLPTDVSGRWQKCDPSRVLFDSICRRGGAACGENLGKIVPII--LIHLEPDQDADVRLASLALLETMLGTDAISQ-AFKPFSVALLQKAIIPNIVWRGGRVAATIRKVAVACAYTLLRQGIAGQQCLFETAPQMLPVLKSSMDDSDAKTRQLVCLALQYLFVALPGCLGEEPVHQLYAEILKRLDDSNDTVRKAACQTFTTFLKAAPKEHFRGTIIDYTMDCLFVHLDDSEPDIQEAVFKVLKETIVIDAPRLAKKAEENRTRHQSPRYCDQLLAL 881          
BLAST of mRNA_H-canaliculatus_F_contig1284.2366.1 vs. uniprot
Match: A0A6G0XR12_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XR12_9STRA)

HSP 1 Score: 239 bits (610), Expect = 3.660e-62
Identity = 180/557 (32.32%), Postives = 280/557 (50.27%), Query Frame = 1
Query:  718 KAVPAAAARALCSSLLPLTMPAAIDEASHWTVRGRRRA---LRLMCFLV-------------------RDDESEVRQAVDECASAVGEAS-IDLAAVLDVLLPVLRGEISGECGEKHLTQALAVLAPVVSAAAATRPRALAPHVAAVCAALCGKGLLGVDPSSSSSVDGGGEELWEAGLEACRAVVDTGLGEELRRPQVRLDLLRALLWLLAGSDAGXXXXXXXXXXXXXXTSDAREEVLEIASQLA--AHQGDGDASQGQGAQDLFTRHFTDLLAYVVGGDSSEEDNGGGWSKGSRLRTGFEALLWSVPGAVGSHLGEVMPIFRELLHDPTRDPELRLNMLALLECVVRQDEVTEESMRPYAEVVLREMVLPNAVWRAGLVAATVRKMTIAVLCTSLRGNKIGVEAVYATAQQLLPVLKTNLEDHEATTRKMTCLSLKMMFQMMPGALGEEPVRLMYPELLKRLDDSNDVVRLAVCDTIAAFFRATAPQNVRGSVLNYSSEQLLVHLDDQDESMQRAVFSVMEVAIAIDPESVKKLASDARSSHRTPDLCDRLVDL 2313
            K+ P   AR     LL   +P+ +++ S WT   R+++   LR++  L                    RDDE+EV ++V  C + VG  S  DL     +LLP+  G ++G+    H T  L +L+  +S   A R   + PH+ A+   L   GL   +            +L  A L A  ++V TG         +   L   L  L+A +                  S A    LE   +LA   H  +         + L+ +  + +L  +        +N   W+K S  R  F++L      A G  +  ++PI    L DP+++P++RL  LALLE ++  +E+  +S +P+A  +L + + PN VW++G VAATVRK+ +A   T LR       A++ +A Q+LPVLK+ L+D +A TR++ CLSL+ +F  +P ALGEEPV  +Y ++LKRLDDSND+VR A C T   F RA    + RG++++Y+ + L VHLDD D  +Q AVF V+    ++DPE + K A + R+ HR+P  CD+L+ L
Sbjct:  317 KSRPPKGARLNAQRLLESVLPSLLEQCSDWTALTRQKSASILRILLILAEDAVNSHVDKILTALAKSCRDDETEVVESVRSCMNVVGRYSQTDL--FFSLLLPLAAGRLAGQDTPHHRTNGLVLLSMGISGMEANR---ILPHMEAITETLSESGLRDTEVPEM--------QLNLAHLTA--SIVATGAPLFATHDTLAFRLFWVLSHLVAST---------------AEDSVAHATALETLGELAKACHVDE---------EGLYRKFLSQVLTAI------RPENSQTWTKASSNRILFDSLCRRGGRACGDQVHLIVPIILAHL-DPSKEPDVRLAFLALLETMLG-NELIAQSFQPFASSMLVKGITPNIVWQSGKVAATVRKVAMASTYTLLRQGLANQPALFESAPQMLPVLKSCLDDTDAKTRQLVCLSLQHLFVALPNALGEEPVSQLYHDILKRLDDSNDLVRKAACATYITFLRAAPRSHFRGTIIDYTMDALFVHLDDPDPEIQAAVFDVLRETFSVDPELLGKKAREHRTRHRSPYYCDQLIAL 826          
BLAST of mRNA_H-canaliculatus_F_contig1284.2366.1 vs. uniprot
Match: G4YK90_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YK90_PHYSP)

HSP 1 Score: 238 bits (606), Expect = 1.960e-61
Identity = 170/552 (30.80%), Postives = 280/552 (50.72%), Query Frame = 1
Query:  727 PAAAARALCSSLLPLTMPAAIDEASHWTVRGRRRALRLM-CFLV---------------------RDDESEVRQAVDECASAVGEASIDLAAVLDVLLPVLRGEISGECGEKHLTQALAVLAPVVSAAAATRPRALAPHVAAVCAALCGKGLLGVDPSSSSSVDGGGEELWEAGLEACRAVVDTGLGEELRRPQVRLDLLRALLWLLAGSDAGXXXXXXXXXXXXXXTSDAREEVLEIASQLAAHQGDGDASQGQGAQDLFTRHFTDLLAYVVGGDSSEEDNGGGWSKGSRLRTGFEALLWSVPGAVGSHLGEVMPIFRELLH-DPTRDPELRLNMLALLECVVRQDEVTEESMRPYAEVVLREMVLPNAVWRAGLVAATVRKMTIAVLCTSLRGNKIGVEAVYATAQQLLPVLKTNLEDHEATTRKMTCLSLKMMFQMMPGALGEEPVRLMYPELLKRLDDSNDVVRLAVCDTIAAFFRATAPQNVRGSVLNYSSEQLLVHLDDQDESMQRAVFSVMEVAIAIDPESVKKLASDARSSHRTPDLCDRLVDL 2313
            P   AR L +S+    +P  +++ S WTV  R R  +++  +L+                     RDDE  V  +V  C+  VG  + D   +L  LLP++ G ++G+   +H T  L +L   +          +  H+  +  ALC  GL        S V    ++L  AG+ +  ++V T      ++ +V   L   L  LLA +                 +S A E   E   +LA           +  + L+  +   LL  +        D+   W K +  R  F+++      A G +L +++P+F  LLH DP +D ++RL  LALLE ++  D +++ S + ++  +L++ ++PN VWR G VAAT+RK+ +A   T LR        ++ TA Q+LPVLK++++D +A TR++ CL+ + +F  +PG LGEEPV  +Y E+LKRLDDSND VR A C T A F +A   ++ +G++++Y+ + L VHLDD +  +Q AVF V++  +AID   + K A + R+ H++P  CD+L +L
Sbjct:  348 PPLGARKLAASIQAQVLPPLLEKTSDWTVHVRERYTQVLSAYLILLEQNMNPLLDKVFAALGKTCRDDEEAVLNSVKACSGVVGFYA-DTQMILASLLPMVAGRLAGQDTAQHRTNGLILLGMSIEG---MTTNTIGAHLELITEALCDAGL------RESEVADLQDQL--AGVVS--SIVKTAGPLLAQKDEVCFRLFWVLSHLLASTSE---------------SSVAYETATEAMEELAV-------KMEKPVEALYGCYMGKLLHTMA----LPADSTASWQKSNPSRVLFDSICRRGGAACGENLEKIVPVF--LLHLDPAQDADVRLAFLALLETMLGTDAISQ-SFKAFSVSLLQKAIIPNIVWRGGRVAATIRKVAVACAYTLLRQGIADQPCLFETAPQMLPVLKSSMDDSDAKTRQLVCLAFQYLFVALPGCLGEEPVHQLYAEILKRLDDSNDTVRKAACQTFATFLQAAPKEHFQGTIIDYALDCLFVHLDDSEPDIQDAVFDVLKETVAIDAPRLAKKAEENRNRHQSPRYCDQLQEL 856          
BLAST of mRNA_H-canaliculatus_F_contig1284.2366.1 vs. uniprot
Match: D0MZZ8_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MZZ8_PHYIT)

HSP 1 Score: 235 bits (600), Expect = 1.130e-60
Identity = 167/551 (30.31%), Postives = 274/551 (49.73%), Query Frame = 1
Query:  727 PAAAARALCSSLLPLTMPAAIDEASHWTVRGRRRALRLM-CFLV---------------------RDDESEVRQAVDECASAVGEASIDLAAVLDVLLPVLRGEISGECGEKHLTQALAVLAPVVSAAAATRPRALAPHVAAVCAALCGKGLLGVDPSSSSSVDGGGEELWEAGLEACRAVVDTGLGEELRRPQVRLDLLRALLWLLAGSDAGXXXXXXXXXXXXXXTSDAREEVLEIASQLAAHQGDGDASQGQGAQDLFTRHFTDLLAYVVGGDSSEEDNGGGWSKGSRLRTGFEALLWSVPGAVGSHLGEVMPIFRELLHDPTRDPELRLNMLALLECVVRQDEVTEESMRPYAEVVLREMVLPNAVWRAGLVAATVRKMTIAVLCTSLRGNKIGVEAVYATAQQLLPVLKTNLEDHEATTRKMTCLSLKMMFQMMPGALGEEPVRLMYPELLKRLDDSNDVVRLAVCDTIAAFFRATAPQNVRGSVLNYSSEQLLVHLDDQDESMQRAVFSVMEVAIAIDPESVKKLASDARSSHRTPDLCDRLVDL 2313
            P   AR L +S+    +P  +++   WTV  R R  +++  +LV                     RDDE  V  +V  C   VG  + D   +L  LLP++ G ++G+   +H T  L +L   +        + +  H+  +  ALC  GL        S V    ++L  AG+    +++ T      R+ ++   L   L  LLA S                  S A E   E   +LA+          Q  + L+ R+   LL  +        D    W K       F++L      A G +LG+++P+    L +P +D ++RL  LALLE ++  D +++ + +PY+  +L+  ++PN VW  G VAAT+RK+ +A   T LR      + ++ TA Q+LPVLK++++D +A TR++ CL+L+ +F  +PG LGE+PV  +Y E+LKRLDDS D VR+A C+T   F +A   ++ RG++++Y+ + L VHLDD +  +Q AVF+V++  + ID   + K A + R+ H++P  CD+L  L
Sbjct:  348 PPLGARKLATSIRAQVLPDLLEKTGDWTVHVRERNTQILSAYLVLLEQNMNPFLDKVFAALGKICRDDEEAVYSSVKACLGVVGFYA-DSHMILASLLPMVAGRLAGQDTAQHRTNGLILLGMSIEG---MTTKTIGSHLELITEALCDAGL------RESEVADLQDQL--AGV--ISSIIRTAGPLLARKDEISFRLFWVLNHLLASSPEA---------------SVAHERATESMEELAS-------KVEQPVEVLYVRYMGKLLEKM----RPPTDASARWQKNDPNCVLFDSLCRRGVAACGENLGKIVPVLVAHL-EPDQDADVRLAFLALLETMLGTDAISQ-AFKPYSVTLLQRGIIPNIVWHGGRVAATIRKVAVACAYTLLRQRIADQQCLFETAPQMLPVLKSSMDDCDAKTRQLVCLALQYLFVALPGCLGEDPVHQLYAEILKRLDDSKDTVRIAACETFTTFLKAAPKEHFRGTIIDYTMDCLFVHLDDSEPDIQEAVFNVLKETVVIDAPRLAKKAEENRTRHQSPRYCDQLQAL 856          
BLAST of mRNA_H-canaliculatus_F_contig1284.2366.1 vs. uniprot
Match: K3W704_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W704_GLOUD)

HSP 1 Score: 234 bits (596), Expect = 2.920e-60
Identity = 170/552 (30.80%), Postives = 274/552 (49.64%), Query Frame = 1
Query:  727 PAAAARALCSSLLPLTMPAAIDEASHWTVRGRRRALRLMC-FLV---------------------RDDESEVRQAVDECASAVGEASIDLAAVLDVLLPVLRGEISGECGEKHLTQALAVLAPVVSAAAATRPRALAPHVAAVCAALCGKGLLGVDPSSSSSVDGGGEELWEAGLEACRAVVDTGLGEELRRPQVRLDLLRALLWLLAGSDAGXXXXXXXXXXXXXXTSDAREEVLEIASQLAAHQGDGDASQGQGAQDLFTRHFTDLLAYVVGGDSSEEDNGGGWSKGSRLRTGFEALLWSVPGAVGSHLGEVMPIFRELLH-DPTRDPELRLNMLALLECVVRQDEVTEESMRPYAEVVLREMVLPNAVWRAGLVAATVRKMTIAVLCTSLRGNKIGVEAVYATAQQLLPVLKTNLEDHEATTRKMTCLSLKMMFQMMPGALGEEPVRLMYPELLKRLDDSNDVVRLAVCDTIAAFFRATAPQNVRGSVLNYSSEQLLVHLDDQDESMQRAVFSVMEVAIAIDPESVKKLASDARSSHRTPDLCDRLVDL 2313
            P+AA R L +S+    +P  +++ S WTV+ R R  +++  FLV                     RDDE  V ++V +C+  VG  + D   +L  LLP+  G ++G+   +H T  L +L   +   +    + + PH+  +  ALC  GL       S + D     L +       +++ T      +  ++   L   L  LLA S                 +S A E  L +                      +     D +  +V   SS       W K    R  F++L      A G+ + +++P    L+H D  RD ++RL  LALLE ++  + V + + +P++  +L   ++PN VW+ G VAAT+RK+ +A   T LR        ++ TA ++LPVLK++++D +A TR++ CL+L+ +F  +PG LGEEPV  +Y E+LKRLDDSND VR A C T + F RA   ++ +G++++Y+ + L VHLDD D S+Q AVF+V++ AI +D   V K A + RS H+ P LCD+++ L
Sbjct:  350 PSAATRKLATSIQSEVLPTLLEKTSDWTVQVRERYTKILSVFLVLLESNMNSFLDKIFAALGKICRDDEDAVVKSVKQCSGVVGSYA-DSQMILASLLPMAAGRLAGQDTAQHRTNGLILLGMSIEGMSL---KTIEPHLELITEALCDAGL-----RESEAAD-----LQDQLAGVVSSLLKTAGPVLPQHDEIVFRLFWVLNHLLASSSE---------------SSIAYETALYLR---------------------YLGKILDKMVLLVDAASS-------WKKNDPSRILFDSLCRRGGAACGASMDKIVPAL--LVHLDAARDADVRLAFLALLETMLGTESVYK-AFQPFSVPLLLNGIIPNIVWQGGRVAATIRKVAVACAYTLLRQGLADQACLFETAPKMLPVLKSSMDDSDAKTRQLVCLALQYLFVALPGCLGEEPVHQLYAEILKRLDDSNDTVRKAACQTFSTFLRAAPKEHFKGTIIDYTLDCLFVHLDDSDPSIQEAVFNVIKDAIDVDKPLVAKKAQENRSRHQNPTLCDQILAL 841          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1284.2366.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KK84_9PHAE4.540e-25464.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI57_ECTSI1.950e-21658.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A225WPQ1_9STRA1.610e-6431.59Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A2P4XB74_9STRA2.290e-6331.70Uncharacterized protein n=2 Tax=Phytophthora palmi... [more]
A0A5D6XR59_9STRA2.690e-6332.47Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
W2PQ39_PHYPN9.930e-6330.74Uncharacterized protein n=43 Tax=Phytophthora TaxI... [more]
A0A6G0XR12_9STRA3.660e-6232.32Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
G4YK90_PHYSP1.960e-6130.80Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
D0MZZ8_PHYIT1.130e-6030.31Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
K3W704_GLOUD2.920e-6030.80Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1284contigH-canaliculatus_F_contig1284:558..14261 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score605.1
Seed ortholog evalue4e-170
Seed eggNOG ortholog2880.D7FI57
Preferred nameHEATR2
KEGG koko:K19759
GOsGO:0000226,GO:0001539,GO:0001578,GO:0003008,GO:0003341,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007600,GO:0007605,GO:0007610,GO:0007626,GO:0008150,GO:0008344,GO:0009987,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0030317,GO:0030534,GO:0032501,GO:0034622,GO:0035082,GO:0036158,GO:0036159,GO:0040011,GO:0043933,GO:0044085,GO:0044424,GO:0044464,GO:0044782,GO:0045505,GO:0048870,GO:0050877,GO:0050954,GO:0051179,GO:0051674,GO:0060271,GO:0060285,GO:0060294,GO:0065003,GO:0070286,GO:0070925,GO:0071840,GO:0097722,GO:0120031,GO:0120036
EggNOG free text desc.inner dynein arm assembly
EggNOG OGs2CMTW@1,2QRXT@2759
Ec32 ortholog descriptionArmadillo-type fold
Ec32 orthologEc-10_003630.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04812
Hectar predicted targeting categoryother localisation
Exons13
Model size3788
Cds size2091
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929014.6708539-UTR-H-canaliculatus_F_contig1284:557..6441622929014.6708539-UTR-H-canaliculatus_F_contig1284:557..644Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1284 558..644 +
1696845647.6257396-UTR-H-canaliculatus_F_contig1284:557..6441696845647.6257396-UTR-H-canaliculatus_F_contig1284:557..644Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1284 558..644 +
1622929014.6840317-UTR-H-canaliculatus_F_contig1284:1425..15751622929014.6840317-UTR-H-canaliculatus_F_contig1284:1425..1575Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1284 1426..1575 +
1696845647.6418378-UTR-H-canaliculatus_F_contig1284:1425..15751696845647.6418378-UTR-H-canaliculatus_F_contig1284:1425..1575Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1284 1426..1575 +
1622929014.950242-UTR-H-canaliculatus_F_contig1284:12801..142611622929014.950242-UTR-H-canaliculatus_F_contig1284:12801..14261Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1284 12802..14261 +
1696845647.7686841-UTR-H-canaliculatus_F_contig1284:12801..142611696845647.7686841-UTR-H-canaliculatus_F_contig1284:12801..14261Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1284 12802..14261 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929014.718934-CDS-H-canaliculatus_F_contig1284:1575..16441622929014.718934-CDS-H-canaliculatus_F_contig1284:1575..1644Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1284 1576..1644 +
1696845647.65505-CDS-H-canaliculatus_F_contig1284:1575..16441696845647.65505-CDS-H-canaliculatus_F_contig1284:1575..1644Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1284 1576..1644 +
1622929014.7485192-CDS-H-canaliculatus_F_contig1284:1695..19021622929014.7485192-CDS-H-canaliculatus_F_contig1284:1695..1902Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1284 1696..1902 +
1696845647.6649747-CDS-H-canaliculatus_F_contig1284:1695..19021696845647.6649747-CDS-H-canaliculatus_F_contig1284:1695..1902Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1284 1696..1902 +
1622929014.7664561-CDS-H-canaliculatus_F_contig1284:2185..25291622929014.7664561-CDS-H-canaliculatus_F_contig1284:2185..2529Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1284 2186..2529 +
1696845647.6733263-CDS-H-canaliculatus_F_contig1284:2185..25291696845647.6733263-CDS-H-canaliculatus_F_contig1284:2185..2529Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1284 2186..2529 +
1622929014.7795382-CDS-H-canaliculatus_F_contig1284:4234..43491622929014.7795382-CDS-H-canaliculatus_F_contig1284:4234..4349Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1284 4235..4349 +
1696845647.6851518-CDS-H-canaliculatus_F_contig1284:4234..43491696845647.6851518-CDS-H-canaliculatus_F_contig1284:4234..4349Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1284 4235..4349 +
1622929014.8013444-CDS-H-canaliculatus_F_contig1284:6038..63201622929014.8013444-CDS-H-canaliculatus_F_contig1284:6038..6320Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1284 6039..6320 +
1696845647.693417-CDS-H-canaliculatus_F_contig1284:6038..63201696845647.693417-CDS-H-canaliculatus_F_contig1284:6038..6320Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1284 6039..6320 +
1622929014.8190506-CDS-H-canaliculatus_F_contig1284:6702..70881622929014.8190506-CDS-H-canaliculatus_F_contig1284:6702..7088Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1284 6703..7088 +
1696845647.7020788-CDS-H-canaliculatus_F_contig1284:6702..70881696845647.7020788-CDS-H-canaliculatus_F_contig1284:6702..7088Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1284 6703..7088 +
1622929014.861632-CDS-H-canaliculatus_F_contig1284:7526..76921622929014.861632-CDS-H-canaliculatus_F_contig1284:7526..7692Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1284 7527..7692 +
1696845647.7100167-CDS-H-canaliculatus_F_contig1284:7526..76921696845647.7100167-CDS-H-canaliculatus_F_contig1284:7526..7692Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1284 7527..7692 +
1622929014.874707-CDS-H-canaliculatus_F_contig1284:8384..84621622929014.874707-CDS-H-canaliculatus_F_contig1284:8384..8462Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1284 8385..8462 +
1696845647.7181046-CDS-H-canaliculatus_F_contig1284:8384..84621696845647.7181046-CDS-H-canaliculatus_F_contig1284:8384..8462Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1284 8385..8462 +
1622929014.8889425-CDS-H-canaliculatus_F_contig1284:9599..96741622929014.8889425-CDS-H-canaliculatus_F_contig1284:9599..9674Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1284 9600..9674 +
1696845647.7269967-CDS-H-canaliculatus_F_contig1284:9599..96741696845647.7269967-CDS-H-canaliculatus_F_contig1284:9599..9674Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1284 9600..9674 +
1622929014.9027493-CDS-H-canaliculatus_F_contig1284:10464..106021622929014.9027493-CDS-H-canaliculatus_F_contig1284:10464..10602Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1284 10465..10602 +
1696845647.7395153-CDS-H-canaliculatus_F_contig1284:10464..106021696845647.7395153-CDS-H-canaliculatus_F_contig1284:10464..10602Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1284 10465..10602 +
1622929014.9158046-CDS-H-canaliculatus_F_contig1284:11813..119301622929014.9158046-CDS-H-canaliculatus_F_contig1284:11813..11930Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1284 11814..11930 +
1696845647.7510715-CDS-H-canaliculatus_F_contig1284:11813..119301696845647.7510715-CDS-H-canaliculatus_F_contig1284:11813..11930Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1284 11814..11930 +
1622929014.932093-CDS-H-canaliculatus_F_contig1284:12687..128011622929014.932093-CDS-H-canaliculatus_F_contig1284:12687..12801Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1284 12688..12801 +
1696845647.7602506-CDS-H-canaliculatus_F_contig1284:12687..128011696845647.7602506-CDS-H-canaliculatus_F_contig1284:12687..12801Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1284 12688..12801 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1284.2366.1prot_H-canaliculatus_F_contig1284.2366.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1284 1576..12801 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1284.2366.1

>prot_H-canaliculatus_F_contig1284.2366.1 ID=prot_H-canaliculatus_F_contig1284.2366.1|Name=mRNA_H-canaliculatus_F_contig1284.2366.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=697bp
MDVGDDDNTSGGGGSGSSNNHGGEAASDRGTAGTGTEGEGGAKRTAKRNV
ERKNKYLEPFRAELVSLLMKLLADESEAVCEQAGGLIEEVGEVWARSSAE
AAAAAAAAAAAAAAAAAAAAAAAAQPGCPQQQPSPTVPPLPPPTRSPATA
VAPAENGTSLKAVPAAAARALCSSLLPLTMPAAIDEASHWTVRGRRRALR
LMCFLVRDDESEVRQAVDECASAVGEASIDLAAVLDVLLPVLRGEISGEC
GEKHLTQALAVLAPVVSAAAATRPRALAPHVAAVCAALCGKGLLGVDPSS
SSSVDGGGEELWEAGLEACRAVVDTGLGEELRRPQVRLDLLRALLWLLAG
SDAGGGGPGTKGGGGGGGTSDAREEVLEIASQLAAHQGDGDASQGQGAQD
LFTRHFTDLLAYVVGGDSSEEDNGGGWSKGSRLRTGFEALLWSVPGAVGS
HLGEVMPIFRELLHDPTRDPELRLNMLALLECVVRQDEVTEESMRPYAEV
VLREMVLPNAVWRAGLVAATVRKMTIAVLCTSLRGNKIGVEAVYATAQQL
LPVLKTNLEDHEATTRKMTCLSLKMMFQMMPGALGEEPVRLMYPELLKRL
DDSNDVVRLAVCDTIAAFFRATAPQNVRGSVLNYSSEQLLVHLDDQDESM
QRAVFSVMEVAIAIDPESVKKLASDARSSHRTPDLCDRLVDLCRPG*
back to top

mRNA from alignment at H-canaliculatus_F_contig1284:558..14261+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1284.2366.1 ID=mRNA_H-canaliculatus_F_contig1284.2366.1|Name=mRNA_H-canaliculatus_F_contig1284.2366.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=13704bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1284:558..14261+ (Hapterophycus canaliculatus Oshoro5f female)
CAGGCCCTCGGAGCGCTGCTTCTCTGCGGCTCCGACGACCTCGACAAGCC CCTCCGGGAGCTCATCCTGCCGCAGTTCGGAAATCTGGTGAGAAGAAACG GGCGCGCGGTCGGGGCATGCTCGGTGGTTGCGCCGCGCGTCAAACCCAAG GGCGACTCTATCTGCGATTTTTTTTTTTGTGTACAGCGCACGGCTTTTTC TGCTTCACGTCTCGATTTTTCCCTGGAGCTGTCTGTCGGGCGTCCTTCGC AGGCAGGGCAGGAAGCGCAGACACACACGTCGACTGCTTTGCTGTTCTGT CCATCTTCGTTCGAAGCAGCAACGCCTTCTGTTTTGTCCCGTATTGTGTT GGAACCCAAGCACGAAGAAAAAAAAGGTTGTCGCGCAGGGTTGCGTGCTA GACCTGCTCGGTCCTGAGCCAATGCGCGCGCGAGACGCTGCCGAACCCGT GGTTTGGGGATTCGTTTTTCTGCTGTCTCTGGCAGCAGGGTTTCAGTCGA AGGGCGCTTGGTCCACTCTGTGCTCTTTCGTCGTTCCGCGGAGCTGCTGT ACTGACGTAGATGACGATGTAGCTTGCCGATGCCGCCGCCGCCCCCCCGC CGACGGAGGAATAAAATGGACGCTGCATCCCGTCGACCCGCCTGCCTATC CGGCGTCCCACCGGGCTACCTGGTTTCTGCCAACGTGGACGCCGCGCTTT TTTCGTGCTTGCCGTTTCTCCCGCTCAGCATCTGGCAGAGCATCAACTCG TATCCCCCCTGCTCCACGCGTCACCCATCCACGCCCAACCCCACACACCG CTCCTTCCCTCCCCGTGCCATGCCCCTCGCCGCCCGCGCGAACCGAAACG CTCGGGATGGAAACCCAGCTGTACGACCGTACGGTGGCGGTGCGGCGGGA GCTCGCGGAAGTTCTCGCCGCCCTCGTGGAGGCGGGCTTCCCCGCCCCCC CACCATCAAACGACGAAGACTGCAACAGCTCCAGCAGCAATCCTGCCGCC GCTCCTCTCGCGACAGCGATGGATGTCGGCGACGACGACAACACCAGCGG CGGCGGCGGCAGCGGCAGCAGCAATAACCACGGCGGTGTTTTTTCTCCCG CGTCGGCGGTGACCGCGGTACCCCCAGCCCCACGAGAGGAAGCAGCGTCG GATAGGGGCACCGCGGGGACGGGGACGGAGGGGGAGGGGGGGGCGAAGCG GACTGCGAAGAGGAATGTCGAGAGGAAAAACAAGTATCTCGAGCCGTTCC GGGCGGAGCTGGTGTCTCTGCTGATGAAGCTGCTGGCGGACGAGTCAGAG GCGGTTTGCGAGCAGGCCGGAGGGCTCATCGAGGAGGTCGGAGAGGTGAG GGTCGTAGCGTAAGGGACAGGTTGTTGTTGTTGTGGTTGTTGCTGCTGCT TTTATACCTGGGGCTGCTGCGGGTCGCTGCTTTTGTCGCGACCAGTATCG CAAGCGTTGCACTGGTCTTGGTGTTCCTGGTTGGTTTGGTTGTGAAGTGC ATTGGCAGGGTCGCTGACCCTTACCGCCCGTCATTCTCAGTGCTGTCGTT TCGTGTACCACCTCCCGCATCTTCCCAGCACGCACCGCTCCCCCCGGTCA CCCCTTCGCCCCTTCGATCCCCCTGCAGGTTTGGGCTCGATCATCCGCCG AGGCTGCGGCAGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA GCAGCAGCAGCAGCGGCGGCGGCACAACCAGGCTGTCCACAACAACAACC CTCTCCGACGGTGCCCCCACTTCCACCACCAACCCGCTCTCCGGCGACCG CGGTCGCCCCGGCAGAAAACGGTACGTCTCTCAAAGCGGTGCCGGCTGCA GCGGCGCGAGCCCTGTGCTCTTCGCTGCTCCCTCTCACCATGCCCGCGGC GATAGACGAGGCGAGCCACTGGACCGTCAGGGGTCGACGGCGCGCGCTGC GTCTGATGTGCTTCCTGGTGCGGTACGCCGGCGAAGACGTCACTCCGTAC GTGCCCCAGCTCTTGGGCTCCCTCGGGGAGTCTAGCAGGTGAGCCGGGGG GTGGGTCGCGGCTGCCTCGCTCGCTCCGAAGGTTGTGTCGAAGCTTGTGG TTCGGGCGTTTGAGCTGGACCTCTTTTGCGTACGACCTTGCTCACGCAAG GAGAGCATCATAGCCACGGCCGCAGTCTGCGAAGAAACGAAGAAAGCTAG GGCTGTGGAGCATGAAACCCGGGAGGTTTGGCGGCGATCTCGCCGCAAGA GAGCGAGGACCCTGCGTGTGGTGACCTGGAGCACACCCGAGACTGTCCGC CTCTTTTCGTCAACGTTGGCAAAGGCATCCTTGGGCCATGTTTCGCCCGC CGTAGCACCCGGTCTGTAAGGAGGCATCGGAAGGCTCGCAGCAGCAAAAG TTTTGCCGAAGGCAGATCGTCAGTAAGTGGCTGGTTTTACTCAAAGAACA TTTGAGGCACGGGAAAAATTCTCAGCGCGGTAAAACGCAAGTACATGGCT CCACTTTTCTCTTCCTCAGTTGATCCTTCAACGTCTGCGGTTGGTATGTT CATGCTCGGAAGTATTAAAACCCGCAAATCATGACGGGGGTTCGGATGGA GATCAAGCGCGTTGGAGGGGCGCGGCTCGAAACAGTGTCTAAGTGGCGAG GCTAGTAGCACAAACGTGTTATTATGCGGCGCAACGATCGCTGTCCTTGT CTTCCTGTTCTTCCAGTCAATCAAAGCTCTGTCTCGTTTCGATAACTATC AACGAGCGGTGGGTGGGGTCTTACGAGGGCCCCCAGGTACCAAGCGTGTG TGGACAGACGCCAAGAGAGATGATCGGAATGAAAGCTGAATCGTGCCGTT TTTGTTTCGTATCATGGCCACGAAAAGGCACGAGTGCGGACGGTGGACGG GAACTAGTGCGATGAAGCCTTCGCTGATTTTGGCGGCGACGGATTTACCG CACGTGTTTAGAGTTAGACCGAGTTCTACGTGCAGTCGGCGATGCACGAG ATTGGTCATGAATCCCATCGTTTGGTGCGTACGAGCTGGGCTGTTGATGC TCACTCGTTTTCTCGTTTGGTAAACCCTAAGAAAGCAAATTGACGCCCTC GGACGCCTCAGCACTAATCGCCTCAGACAGTGGGGGCAGGGGGTTCTATG GGTAGGGAGGGGTCGGCGGCAGCCCTGGACCGGGAGGAGCAGCATGCCGG CGCCTTTACTTGTTGGTGTTTACGAGTCGCATAGCTAACGGGATTTACGC GATTTCGAGCTCTCCTGAGAGCACGTACCCGTGGCTCGGAAAAAGGGGTA TCGTCACCAGAGCAGGAGCTGAGATAATACAAACTTCGCAAGCCTCTCTC CGCGAAGCCTCGATTTCCTAGCGGAGACGGAGACAGACGCACAGCACAGC GACAGGATCTCGAAAGCCGGCTGCTCCGAACGCGAACGCGAGGGAGTGGG GCAAGACCATGCGGACTGAATGACAAACTTTCTCTCTCCCAGTCCCCCTC TTCGTTCTGCTCGCGAGCCGCAGGCCACCCTGGTGTGTGCGTGAGGCAGG CCCTAAGAACAATGATTTTTTGTTTTGTTTTACAATCTGTTGGATCACAA ACGAGTGAAACGATCAATTGTGAAGGAAGCGAGAATATATCATTTTTTCT TTTCTTGTTTTTAAACAACGACGATAGGGATGACGAGTCGGAGGTGCGGC AGGCGGTGGACGAGTGCGCGTCGGCGGTCGGGGAAGCCTCGATCGACCTC GCAGCCGTTCTGGACGTCCTCCTTCCAGTCTTGAGGGGCGAGGTGAGCCG CGAAAAAGAGGAAGATATGTGAAAAGAGGTAATCGTCCTTGACAGGCGTT ACGGAGGCGGCACCTTTGTAAAGGTGACTTAGGCATCATCCCCCCGGTTT ATGAGAGTTTTTTTGGTTGTTAAGCAAGAAGAGGTCTACGAGAGGTACAG GCCCGCATCATTGCATTCTTCTTTCTTTTTTGGATAAGGAAGGGGGTCTT TTTTCTAGAAAAGGAAATAACTGGCCGCGGATTCAATTTCGGGTCTGTGC CACCGAGGCTAACAGTCTCTATCGTCGACGCCAAATGTGAAAAGAGGGAA TCGTCGCCGACAGACGTTGCGGAGGCGGCACCTTTCTAAAGGTGACCGCC ACAGAGAAGGAGCAAAAAAACAAGACAGAGAAAACAAACACGGAAAAGAA AAAAGGTCAGGAGGTGGCTCCCATCACCGCACGAACGCACGCACATACGC AGCATCTGAGGGATCTGTCGACAACGCACAAAGGGCTAAGACCTCATCCA TCGTGAGCCTACGGCTTCAAGCACGCGGGCACGCAGCAAATTACCCAGCC AACGAGTCCGCCACGTTCATACGAGGGTATGGGCATTTGGATGTTTCGCT GACGCCTCGAGGAAAAAGCCCGGCTTCGATTCCTTTGCGCTCAGTCTTGG GTGTGGCGTATATGTGTGCGCGTAAGTATGCGCGGTCAACTTAAGCGCGG GATAAGGATTCCTGAGCGCCCTCGGTGGGCTTCCAGACGCTTCTTTCGCT TGACTTGCCGGCCCTTGCTTACCGTTTTCGAACGGATTGGAGGATTGAGG CAAATATGTACTCGAGTACAACAGAGAACGGAGTACAGGTCACTTTCGTC TACTCTTTTTTGCTCTTTCAAGGGTGGAGGACCTTGGGTGATCGCTCGTG TCGCGTCTTTGTTGTCCTGCTTCCTCTCGAAAAAATGTCTATGTGTGTGT GTGTGTGTTTTCCGATCACATTTGTTGCTCTGGGGGTATCTAGAATTCGT TCCACACAATGCAAGCAAGTCAGGCAGGCAGGCAGGAAGGCAGGCAGGCA GACAGGCAGACAAGGAGGCACTCATCTGTGCACCCCCCTCTCGAACAGCC AGCAGGGCACGCGAGGGCCGAGCGGGGTACTCACGACCCAAGGAGAAAAT CATGCCGGCTGCAAAAAAAGGAAACGTAAAACGCGGAAAAGCCTGCTGGC TAATTTCTCAGGGGGACGGTCGATCACGCTCGGGACGAACTCCTTGTAAC TTTGCGGTCCCCAAGCCCCGCCCAACACAGCGTCGCGTTGTTGGACCGCT TCGCGCCGCCGTGGTCGTTCAGATCACTCCGCAGAGTGAGCGTACAACCT TGAGTGAGTGTACAACCTTGGTCTTGAAACGAACTCCCCATCCGCACAGA ACCTGCCCCCTCCTGCTCTCTCCGACCTTTCTCACCCTACTCCTGGCCTG GCCTCCCAACAGACCCCCACAATCCGCCAAAGTTTTTGTCCAGCGTCAAT AGACCCCTGTGCGGAGAGCGTCCCCCGGCAAGCATTCGCGCCGACCAGCG AAACTGAAATCCACGGTACCCCTCCCCTCCCTCCCCCAATCTCTGCCCTG TCTGCCGTCCCCGGCCGGGTCCCAAAATGAAATCAAACGTGAACAACAAT CACCGACGACAACAACGACAATTCGACGAAGATTTCCGGCGAGTGCGGCG AGAAGCACCTCACCCAGGCCCTCGCGGTCCTAGCACCGGTGGTCTCGGCC GCGGCGGCGACGCGGCCGCGAGCCCTGGCACCGCACGTGGCGGCGGTGTG CGCGGCGCTGTGCGGTAAGGGCTTGCTCGGTGTCGACCCTTCGTCCTCCT CCTCCGTCGACGGCGGCGGCGAGGAGTTGTGGGAGGCGGGGCTGGAGGCG TGCAGGGCGGTGGTTGACACGGGGCTCGGGGAGGAGCTTCGGCGGCCGCA AGTGCGGTTGGACGTGAGTCGGGCGAGACGGCCGGAGGGGGGGGGGAGGG GGGAGTGCTGCCGCTTCGTCCTTTGATCGCTTTGGTCGTTGCGGTTGCCG GCCACTGTTCGCGTTTGTTGTCGCGGATGACGTTGCTATCGCTCGTGGTT CTGTTGTGCCCCTTTTCATTATGATGTGCAACTGCCGAAGGACGAGGGCC TTCGTGTCTTGGCCTTGCTCCCACCAACGCTCAGTCACGTGTGCTCTTTC TTCCCTGGAAATACCACTCCTCCTTCTCCTCCTCTTCCTCCTCCTCCCCC TCCTCCTCCTCCTCATCCTCCTCATCCTCCTCCTCCTCCTCCCACGCCTC ACTTCCACCGTACCTGCCGCCGCCGCCACCGCCGCCGCCGCGCAGCTCCT GCGGGCGCTCCTCTGGCTGCTCGCCGGGAGCGACGCCGGAGGCGGGGGGC CAGGGACGAAAGGAGGGGGCGGCGGAGGCGGAACTTCTGACGCCAGAGAA GAAGTGCTGGAGATCGCGTCCCAGCTGGCCGCTCACCAAGGCGACGGCGA CGCTTCCCAAGGCCAAGGCGCGCAAGACCTCTTCACCAGGCACTTCACCG ACCTCTTGGCCTACGTGGTAGGAGGAGACAGCAGCGAGGAAGACAACGGT GGGGGTTGGAGCAAGGGGTCCCGTCTTCGGACCGGATTCGAGGCCCTCCT GTGGTCGGTGCCGGGGGCGGTGGGCAGCCATCTCGGGGAGGTCATGCCCA TCTTCAGGGAGCTCCTGCACGACCCGACCAGGTGGGGGGGTTGGTGGCAT GCGCTCGAGAGGCGTGCTTCTAGGTAGGATGGGCAAGACTTGTAGGTGTC GCGTCGCGTTAGGATGGCGGCGTGTTGTGGTTCCGTCCCGTCGCGTGCGT GCTGCGTCGAGGGTGGTTGTCTCTGGCGGTTGTCTCTTCTCATGATCACG CTGTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTGGGT GGGTTGGTTAGCGGCGATTGGGTCCGGCTCCACGGACGTAGCAACACGCG GACACACAGATACACAGACACACATGGATGTAGGTACCGAGGGAAAGCGA GGGTGTGAATGTCCCAACCTGCGCCGATTACATGCTACACCTGTCCATAC ACACATACGTTTCTACGAGCGAATCAACACGCTCGACAACGGCATACACG ACAACCACAACGACGGCAGGGATCCCGAGCTCCGGCTGAACATGCTGGCG CTGCTGGAGTGCGTGGTGAGACAGGACGAGGTGACGGAGGAATCCATGAG GCCCTACGCGGAGGTCGTCCTCAGAGAGATGGTGCTGCCGAACGCGGTCT GGCGTGCTGGCTTGGTGGCGGCCACCGTCAGAAAGGTGAGATGCGGCCGG AGTTGGGAGGACGAGGCACCGTCATGAAATTCAGTGCTGGTAACATGGTA TTGTTGTCTCGTACGTGTTCCTCTTCGGTTCCGACCTTTTATTCTCCGTG TGAACATCTCGATGCGTGGTTGGGCACAAGACCGGGGCTTCTTTTATTTT GTCTCGGTGCTGTTGTGTCCGCCTGCAGCTCGTTTCTCTGGTGTACCTCT CGGTGGCTTCCTGCTCCTCGCCGGCTTCGTACCGTACCCCCCCGCCGCCT TCCATGTCGGCTCTCCGGCAGATGCTGATTGTTTTCGCCCGCCTCGCGTT TAGTCCTCCGCATAAAGAGTCCATGCTTCCTCGACCACTCTCTTTACACA TCTTCCCGCCGTACTTGTTCGGCCGAAGCCGTCGTCTCGCCTGTGTGCTA TCACACCACGCCCCTTTTTCGTCATTCCGAGGACATCGTGCATTGCTCCG TATGCCTGGCTTGGTCGAAATCGGAGCACGCGGCTGCGCTGCTTCCGCGG ACGGCCACGGTAGCACTCCCAGGGAAGGGACCGCCTTTTTTTTTGCTGGA GCCGTAGTTTATCGTTCTAAGCTCGCATCGTGTCCAACCCCTCCACCGAC GACGGCGACGAGACAACAGAGCCTGCTTCCTTCGCGCCTTGTGTTTGGAC GGCGCTGACGATGCGGCGCAATGACAGATGACGATAGCCGTGCTCTGCAC GTCCCTGCGGGGCAACAAGATCGGGGTGGAGGCGGTGTACGCCACCGCAC AACAGGTGAGTTTGTACACGAAGAAGAGGGGGGTTCCGAGGATGGTTTTG TGGAGACCTTTGGGGGTCTGGCGCGCGGGGGGGGGGATTGGGTGGCGGGG GGAGTGGAGGGTTCTGGGCGGTCCGGTCGATTTCGCGTAGCTCTCCGCCG CTGACAGAGCAGGCGGGCATTGTTACCCAGGCAGGCGAAGAGAAAGCGGC GGCGATTTTGCCGCATTTCCCCCCCCCCCCATCTGATAGAGCTCGCTTGC TCTGCATTTCGGCTGTTTGACTGGTTTTGTGGACGTTTTTGTTGCGGGGG CGGGGGAGGGCACGGTTTGGGTCCTCGTACAAGCGTTGCTTAAGCCTGTG GTGGCCCTCGATCGACTTGCGTTGGTGTGGAGCCAAGCCACACCTTCGCG AGGCCAGTGCTGGTTAAAGGGTTTTTGTCGTTTGTCCAAAGGCGGAGAAG AGACTGGTAATGATTGGTTGAGTCGAAACGTTGTATCGTTCTTCCGAAAA CGCCGGAGGGATCGAAATCCATCGATCGACTGAACCTAAAATCACGGAAT ACTGTAGGGCCATTCCGTGGTTGGTGTTATTTGTGAGCTCCCTGCCTCTC CGCGGTTGGTGAAGATGTCTGTACGGTTTGACCCTGCGGACACTGGTCGC ACACCTACTTTTCGTTGGTGCCAAGATTATGTTGTTGTTGTTGTTGTTGT TGCGCGTCTGCACGATAAGCTTATCGTCCGCGTCAAGCAGCGGCTCTGCG GGCGCTGCGTCCCGAAGGCGTCGAGTCAACTCGGCCATCGCGAAGTCACA CGCCGCCGGAGTTTCGCTTTTCCTTGTGGAAAGGGTGATTCTTCGCTCGC CTTCATCGTGTGATGCAAAAACGAGAAACGTCGCCCCCCACTCGCACGAG CAACAACAGGTGCCGCTGGAGCCGGCGTGGAGACCCTCCACGCCCAGCGA CTACTCCCGCCGACCCTTTTTCGGCTTCTTCTTGTCCTCTTCTTCTCTTT TTTCTCTTACTTTATGTTTTCTTCTCTTGTCACTGTCCGTTCTGGTCAGC ACGAGTTTCGCAAGCCCGCGGTCCTTGTCCATAAACCGAAAAACCCTCCG CGCGTCCTCGTGTCAAACCGTGGTAACATGTAAACGCGACAGCTGCTACC GGTGCTCAAGACCAACCTGGAGGACCACGAGGCAACTACCAGGAAGATGA CATGCCTTTCTCTGAAGGTGCGTTTCCTTTTTGTGCGGCGTGGCTTTTGG AGATGTGTTGTGTGGGTATGCACGGTGGGAAGGAGCGCTAGTATTTTAAG AAGATTATGAAAGCGTCAGCGGTTTACTTTTAAACGGAGACAGATCTGCA TTTTGCTCAGGGGACTGTGCAAACTCATTTCAGGTTTGGTGGTAGCTGCT GCCGCATGGTGGTGGATGTGGTGGATGTGGTACATGTGGTACATGTGGTG CGCTTTCTTTCTGTCTGTCTCGTTCCCTTGCTCGATCTCTCTCCCCCTCT GACTCTGCGTCAAGATTGTCCTGCTTTCGACTTTCTACTGAAGTTTGACT TTCCGTTGAAAGGGTACACGCCGAAGGCCTCGCACGTGCCGACGGCTCGG TCTTACGCTCGGCTGCTGGTGCATGTGCTTGCCTCCACAACGTGGCGTGG TTTCCTTTCGCTTTAAGGTTACCCGGTAACGCTGGCACGACTGAACCACT GCTGTAGGCTCCTGTCTTTGTAGCAGCCTCCTCTGATTCCTTCCCTTTTG ACAGAAAGATTTCCGAACATGGTTCATGTCTAGGGAACACTTATCGATTT CGTCGAGGGCTACTCGCTCCCGTTCGATCCCATTCAACTCATCCCTGTGC GAACGACATTCGGTTCCATTCAACCCCAGTGAAACATTCTGATCAAGCTC AAACACCGCCCGATGTTTTCCTCGCGATTTCAAGCTACTGCCGTTCGATC AAACCCCTGGATTTTGGCGTTGTCGCGTCACGACCCGCTGTCTTGCCCCC CTTGCAGATGATGTTTCAGATGATGCCCGGCGCCCTGGGCGAGGAGCCGG TCAGGCTCATGTACCCGGAGCTCCTGAAGCGTCTGGACGACAGCAACGAC GTCGTGAGGCTGGCGGTCTGCGACACCATCGCGGCGTTCTTCAGGGTGAG GAACCATGAGAAAAAGGAAGATGTCTGTGCTGAACCCTCCCTGTAAGGAG CACAACATAGTCAGCCTGAGTCGCTACAATTTGTCTCTCAGTGGGTATTC CTTTGGTGTTCGTGACTCTTTCCCCGGAAAAAGAAAGTGTTTGCTCGCAA GATCAGGAGCGGAAGCTTCGTCTGTTGTTGTAGGCATATGTGCCCACTCA GCACAAGGAGGTTATTCGCGGAACCTACACGAGAGAGAGGCGGGGGGCTT CTTGTACCGGCCATGAACGCGCATTCAGGGCGAGAGGGCGGATCCGTTTG CTCGTTGCTCGGCTCATCTGATGTGTTTCTGTTGAATCGCCGTTCACCGC TTTTGGGTTGTTTCGTTGTTTCCGGAAATTTCTTGTTCTTGCTGCTGCTG CTGCTGCTGCTCCTGGTGCTACCGTACTGTTCTGGTTCATGCTTGTGTTG CATTGGACACCGATGCAGCGGCCGTGCTGCTCTCTGTCACCGCCCTCTCG AAATTTTACCGTGCTGGTGACCCCCCAAGACTCTCACGGGGCATGCAGCA GGCATGCACACACGCTTGTGCTTTCGGCCTGCCATTCGGTTGCCTTTTCT CTTGTCTCGGCAAGAGGCTGCGTGGACCCATCGCCTCGCCTGGTAATGAA CTAGTCGGCAGAGGCCACGGCTATCTTTTGCGCGACCCCAACACGCCGCC GTGAGGGAGGGGGCTGGCTTCCACGAAAGTTCTAATCTTCGTCTTCATAA TTTATCAAACAAGAGTCAACAAACACAGGAGGGGACACTATCTTAGATAG GGCTCGGGCGAGGCGGTCGGTTAGGGACCCGGCACAGCCTTTCTTGGAGG CAACACCCCATCACTTGATGTGATGCCGTACAGTATCGCTTTATGCTGCG CGCCTCGTTACGGAAAGGCGACCCAAATCTCCATCCCATCCCACTCCTGC TTGATACCCTCCCTTAGCACAAACAAGCATCAAGTGTATTTGAGCTTCGC TGCATGGACGGATTGGGGGATTCTCCACGGCGGCCATGCAAACTGACTGA TGTACACTTCTATATTCGTATCACACAAACCGAGGACCAGTTTTTTTGTT CGCCTCGGCTGCTTTTTTTTTCTCCCCTTTCTCATCCTCCCGAGGCTCTG TTTTTGCCCGCCACACTATTGTTGTTGTTCCGCGTGTGCGTGTGCGCACT TGCCAGGCAACCGCGCCTCAGAACGTTCGCGGATCGGTCCTCAACTACTC CTCGGAGCAGCTGCTGGTCCACCTCGACGACCAGGACGAGAGCATGCAGA GGGCCGTCTTCTCGGTCATGGAGGTGCGTGTGCTCGTCCACGTGCCTTTC CCTGTGCGTGGGACTATGTCGATTGATTGTCTTGCTTGTGCTCGCGTTTG TCGTGTGTTGGTGTGTTTGTCCACGTTTGCTGCTTTGTGTGCCCGTGTCG TGTATGTCATGTGCACTTATGCGCACGAAGACGTATGTGTTTATGGATTG TGTGCTCGTGTTTGGGATCTTGTGTGTGAGAGAGAGAGAGCACAGTACCG GCCCGCTAGTAAGAAGCTGGAATTCCGGCCGAGGCTGGCGTTCTTAACGC AGTTATATGGTGGGTTTTATCATCACACTCGCCACGGAGCCCCTTTTTTT CGTAAATCCGAGCCCACATTTCTTATTATTGCGTTTCTTAGTAGCGGGCC GGTACTGTATGTGTTTTGACGTATTTTTGTGTTTGTATCGATGTGCGTGT ACGTAACGTGGAATGTAGCGTTCTTCGCCCCAGGACGTGTTCCTACGGCG TTGTTGTGCCTTCCCTTAAAAAAGCATGGGGCGTATGTGCCGTTTTGCTT CGTCCGCTCCTTAAATGCCAGGAAGCATCAATACACCCTCACGCGCATGT GAAACTCCCGAACTATGGCGCAATCCTCGCATTCAGACGAAGAACCACCA GCGAACCCGTTCCGTCCCACACAAGCTCGTGGGTTGATCCGCACTCCATT CCCTGATTCGTTGGCTCGTTCTTTGGCTGCGCTTCCGTCTCTTCCTTTTT GTTCTTGCGCGCTGTCTGTGCGCGAAAAAGGTGGCCATTGCGATCGATCC GGAGAGCGTGAAGAAGCTGGCCTCAGATGCGCGGTCGTCCCACAGGACTC CGGACCTCTGCGACCGCCTCGTCGATCTGTGTCGACCCGGTTGAAGAACG AGCCGTGCCGCCAGACATGAAAACACAACCGAGGCAGGTCGTCCGTCTAT GTTAACGCTCGCCGGTGGTATGGCGTGCGACGGCGTCGCTGTGCGGCGGG GTAATTTTGTTATTTTCTGCTCTGCCGCGGTGGTCTTTCTCTCGTCGGCT GGCTGTCGCTTGCTGACGGAGGGTGCCACAAGCTCAAGAGAGGACGCAGT TGACCCACGATACCTAGCGAATTAATGGATCGGAGATCGGAGTGGAAAGA CCGCGAGAAAACGTTTGGCTTAGGGCACGATGGGGTGTTTTATTTCCGGC TCTCGCTTGAGAAAAATTTCGGGAGCGAAAGCTTCGGGTGTGGGCTATCC GCCGCCGTGCGTGCTACTATCTGCGGGATCGATACGAGGAATCATCGCAC ACATCCACAGCGAGAAAAGTTGGATGTCTGTGTCCGTACACGCGCACAGC AGTAGTGATGACCGGAAGATATTGACGCCGTTGGCGAACCGAAGGGCTGC TATTTTACCCCGAGTCAAGGCGACCGCATGCTGGTGTGCCGGGCCACAAT GCTTCTGGCGATGGAGATCGACCAATCGCCAGGCACCCTCAACACCATTT GGCAGAGCGGCCAGTCGCCGAGAGGCCTGGCTGTCCTTCCCGCACACTGA TGCGCTAAAAAAAACTGGTATTTCCACGTAGATGTACAGGGGGGGCCAGG ATTGTTTGAATAATTGCGTAAGACGGAGAGGGAAGTCGTGGTCCACGCCA GGCACTGGACCACCCCCGGCACATGTCCTACCCCGTCGAAGAGATCAAGT ACTGGCTGCAGTAGGCGTACGAGGCACCGAGTAGTTTTAGTCCTTCTAGG TCCGCGGGAAGACTTCGCGGCGAAGAGGCTACCAGGGATAATGCCCATAT AGGGCATGAGGGGGGGGGGGTACACGCAGCTTGCGTACTGAAGTTGGATA CTCGCGAGTCTGTGCATGCGCGTTGAAGGCTCGAAGGGACCGGACGGTGT GGTCGACACGACACGTAATTTCGTCCATGAAACTGCTCGTGTCTTTTGAT TCGTCTACGATTGTCGGATGTTCGCTCCGCGCCCCCTCCCCCGATGAAAT GTTTTTTGGTCATTTTTCTCGCTGCCAGCACCGTTGGGCTCTCTGTTCGA CGGTGAGTGCCCCATCGCATCGCCGTCAGCATCTCGTCTACTCCCAATCC AAGCTTCGACGCGTACCTTGGATACGTGGATTTAACACGAAGATCACCGG AAAATGTCGGGGCGCGTGGGAGGGTCTCAACAAACACACATGACGACCGC CGCCTTTCAGCGAGAGGTGAAGGTAGCAGCGAGGACGACGAAAAAACGAA GGACATGTGGTAGCTGAAGACAGAAACAGCACCGAAAATCCGGAACTATT TTCGGATGGATTCCGTTCCAACGTCGACACGCCCACCAGGTTATTTGTTT TTCC
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1284:558..14261+

>mRNA_H-canaliculatus_F_contig1284.2366.1 ID=mRNA_H-canaliculatus_F_contig1284.2366.1|Name=mRNA_H-canaliculatus_F_contig1284.2366.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=4182bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1284:558..14261+ (Hapterophycus canaliculatus Oshoro5f female)
ATGGATGTCGGCGACGACGACAACACCAGCGGCGGCGGCGGCAGCGGCAG
CAGCAATAACCACGGCGGTATGGATGTCGGCGACGACGACAACACCAGCG
GCGGCGGCGGCAGCGGCAGCAGCAATAACCACGGCGGTGAAGCAGCGTCG
GATAGGGGCACCGCGGGGACGGGGACGGAGGGGGAGGGGGGGGCGAAGCG
GACTGCGAAGAGGAATGTCGAGAGGAAAAACAAGTATCTCGAGCCGTTCC
GGGCGGAGCTGGTGTCTCTGCTGATGAAGCTGCTGGCGGACGAGTCAGAG
GCGGTTTGCGAGCAGGCCGGAGGGCTCATCGAGGAGGTCGGAGAGGAAGC
AGCGTCGGATAGGGGCACCGCGGGGACGGGGACGGAGGGGGAGGGGGGGG
CGAAGCGGACTGCGAAGAGGAATGTCGAGAGGAAAAACAAGTATCTCGAG
CCGTTCCGGGCGGAGCTGGTGTCTCTGCTGATGAAGCTGCTGGCGGACGA
GTCAGAGGCGGTTTGCGAGCAGGCCGGAGGGCTCATCGAGGAGGTCGGAG
AGGTTTGGGCTCGATCATCCGCCGAGGCTGCGGCAGCGGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCGGCGGCACA
ACCAGGCTGTCCACAACAACAACCCTCTCCGACGGTGCCCCCACTTCCAC
CACCAACCCGCTCTCCGGCGACCGCGGTCGCCCCGGCAGAAAACGGTACG
TCTCTCAAAGCGGTGCCGGCTGCAGCGGCGCGAGCCCTGTGCTCTTCGCT
GCTCCCTCTCACCATGCCCGCGGCGATAGACGAGGCGAGCCACTGGACCG
TCAGGGGTCGACGGCGCGCGCTGCGTCTGATGTGCTTCCTGGTGCGGTTT
GGGCTCGATCATCCGCCGAGGCTGCGGCAGCGGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCGGCGGCACAACCAGG
CTGTCCACAACAACAACCCTCTCCGACGGTGCCCCCACTTCCACCACCAA
CCCGCTCTCCGGCGACCGCGGTCGCCCCGGCAGAAAACGGTACGTCTCTC
AAAGCGGTGCCGGCTGCAGCGGCGCGAGCCCTGTGCTCTTCGCTGCTCCC
TCTCACCATGCCCGCGGCGATAGACGAGGCGAGCCACTGGACCGTCAGGG
GTCGACGGCGCGCGCTGCGTCTGATGTGCTTCCTGGTGCGGGATGACGAG
TCGGAGGTGCGGCAGGCGGTGGACGAGTGCGCGTCGGCGGTCGGGGAAGC
CTCGATCGACCTCGCAGCCGTTCTGGACGTCCTCCTTCCAGTCTTGAGGG
GCGAGGGATGACGAGTCGGAGGTGCGGCAGGCGGTGGACGAGTGCGCGTC
GGCGGTCGGGGAAGCCTCGATCGACCTCGCAGCCGTTCTGGACGTCCTCC
TTCCAGTCTTGAGGGGCGAGATTTCCGGCGAGTGCGGCGAGAAGCACCTC
ACCCAGGCCCTCGCGGTCCTAGCACCGGTGGTCTCGGCCGCGGCGGCGAC
GCGGCCGCGAGCCCTGGCACCGCACGTGGCGGCGGTGTGCGCGGCGCTGT
GCGGTAAGGGCTTGCTCGGTGTCGACCCTTCGTCCTCCTCCTCCGTCGAC
GGCGGCGGCGAGGAGTTGTGGGAGGCGGGGCTGGAGGCGTGCAGGGCGGT
GGTTGACACGGGGCTCGGGGAGGAGCTTCGGCGGCCGCAAGTGCGGTTGG
ACATTTCCGGCGAGTGCGGCGAGAAGCACCTCACCCAGGCCCTCGCGGTC
CTAGCACCGGTGGTCTCGGCCGCGGCGGCGACGCGGCCGCGAGCCCTGGC
ACCGCACGTGGCGGCGGTGTGCGCGGCGCTGTGCGGTAAGGGCTTGCTCG
GTGTCGACCCTTCGTCCTCCTCCTCCGTCGACGGCGGCGGCGAGGAGTTG
TGGGAGGCGGGGCTGGAGGCGTGCAGGGCGGTGGTTGACACGGGGCTCGG
GGAGGAGCTTCGGCGGCCGCAAGTGCGGTTGGACCTCCTGCGGGCGCTCC
TCTGGCTGCTCGCCGGGAGCGACGCCGGAGGCGGGGGGCCAGGGACGAAA
GGAGGGGGCGGCGGAGGCGGAACTTCTGACGCCAGAGAAGAAGTGCTGGA
GATCGCGTCCCAGCTGGCCGCTCACCAAGGCGACGGCGACGCTTCCCAAG
GCCAAGGCGCGCAAGACCTCTTCACCAGGCACTTCACCGACCTCTTGGCC
TACGTGGTAGGAGGAGACAGCAGCGAGGAAGACAACGGTGGGGGTTGGAG
CAAGGGGTCCCGTCTTCGGACCGGATTCGAGGCCCTCCTGTGGTCGGTGC
CGGGGGCGGTGGGCAGCCATCTCGGGGAGGTCATGCCCATCTTCAGGGAG
CTCCTGCACGACCCGACCAGCTCCTGCGGGCGCTCCTCTGGCTGCTCGCC
GGGAGCGACGCCGGAGGCGGGGGGCCAGGGACGAAAGGAGGGGGCGGCGG
AGGCGGAACTTCTGACGCCAGAGAAGAAGTGCTGGAGATCGCGTCCCAGC
TGGCCGCTCACCAAGGCGACGGCGACGCTTCCCAAGGCCAAGGCGCGCAA
GACCTCTTCACCAGGCACTTCACCGACCTCTTGGCCTACGTGGTAGGAGG
AGACAGCAGCGAGGAAGACAACGGTGGGGGTTGGAGCAAGGGGTCCCGTC
TTCGGACCGGATTCGAGGCCCTCCTGTGGTCGGTGCCGGGGGCGGTGGGC
AGCCATCTCGGGGAGGTCATGCCCATCTTCAGGGAGCTCCTGCACGACCC
GACCAGGGATCCCGAGCTCCGGCTGAACATGCTGGCGCTGCTGGAGTGCG
TGGTGAGACAGGACGAGGTGACGGAGGAATCCATGAGGCCCTACGCGGAG
GTCGTCCTCAGAGAGATGGTGCTGCCGAACGCGGTCTGGCGTGCTGGCTT
GGTGGCGGCCACCGTCAGAAAGGGATCCCGAGCTCCGGCTGAACATGCTG
GCGCTGCTGGAGTGCGTGGTGAGACAGGACGAGGTGACGGAGGAATCCAT
GAGGCCCTACGCGGAGGTCGTCCTCAGAGAGATGGTGCTGCCGAACGCGG
TCTGGCGTGCTGGCTTGGTGGCGGCCACCGTCAGAAAGATGACGATAGCC
GTGCTCTGCACGTCCCTGCGGGGCAACAAGATCGGGGTGGAGGCGGTGTA
CGCCACCGCACAACAGATGACGATAGCCGTGCTCTGCACGTCCCTGCGGG
GCAACAAGATCGGGGTGGAGGCGGTGTACGCCACCGCACAACAGCTGCTA
CCGGTGCTCAAGACCAACCTGGAGGACCACGAGGCAACTACCAGGAAGAT
GACATGCCTTTCTCTGAAGCTGCTACCGGTGCTCAAGACCAACCTGGAGG
ACCACGAGGCAACTACCAGGAAGATGACATGCCTTTCTCTGAAGATGATG
TTTCAGATGATGCCCGGCGCCCTGGGCGAGGAGCCGGTCAGGCTCATGTA
CCCGGAGCTCCTGAAGCGTCTGGACGACAGCAACGACGTCGTGAGGCTGG
CGGTCTGCGACACCATCGCGGCGTTCTTCAGGATGATGTTTCAGATGATG
CCCGGCGCCCTGGGCGAGGAGCCGGTCAGGCTCATGTACCCGGAGCTCCT
GAAGCGTCTGGACGACAGCAACGACGTCGTGAGGCTGGCGGTCTGCGACA
CCATCGCGGCGTTCTTCAGGGCAACCGCGCCTCAGAACGTTCGCGGATCG
GTCCTCAACTACTCCTCGGAGCAGCTGCTGGTCCACCTCGACGACCAGGA
CGAGAGCATGCAGAGGGCCGTCTTCTCGGTCATGGAGGCAACCGCGCCTC
AGAACGTTCGCGGATCGGTCCTCAACTACTCCTCGGAGCAGCTGCTGGTC
CACCTCGACGACCAGGACGAGAGCATGCAGAGGGCCGTCTTCTCGGTCAT
GGAGGTGGCCATTGCGATCGATCCGGAGAGCGTGAAGAAGCTGGCCTCAG
ATGCGCGGTCGTCCCACAGGACTCCGGACCTCTGCGACCGCCTCGTCGAT
CTGTGTCGACCCGGTTGAGTGGCCATTGCGATCGATCCGGAGAGCGTGAA
GAAGCTGGCCTCAGATGCGCGGTCGTCCCACAGGACTCCGGACCTCTGCG
ACCGCCTCGTCGATCTGTGTCGACCCGGTTGA
back to top