|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 395 |
| Cds size | 393 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929013.3514473-CDS-H-canaliculatus_F_contig1283:8774..8809 | 1622929013.3514473-CDS-H-canaliculatus_F_contig1283:8774..8809 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1283 8775..8809 - |
| 1696845647.2339377-CDS-H-canaliculatus_F_contig1283:8774..8809 | 1696845647.2339377-CDS-H-canaliculatus_F_contig1283:8774..8809 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1283 8775..8809 - |
| 1622929013.3667874-CDS-H-canaliculatus_F_contig1283:9077..9174 | 1622929013.3667874-CDS-H-canaliculatus_F_contig1283:9077..9174 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1283 9078..9174 - |
| 1696845647.2430873-CDS-H-canaliculatus_F_contig1283:9077..9174 | 1696845647.2430873-CDS-H-canaliculatus_F_contig1283:9077..9174 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1283 9078..9174 - |
| 1622929013.4035141-CDS-H-canaliculatus_F_contig1283:10687..10732 | 1622929013.4035141-CDS-H-canaliculatus_F_contig1283:10687..10732 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1283 10688..10732 - |
| 1696845647.2510524-CDS-H-canaliculatus_F_contig1283:10687..10732 | 1696845647.2510524-CDS-H-canaliculatus_F_contig1283:10687..10732 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1283 10688..10732 - |
| 1622929013.417069-CDS-H-canaliculatus_F_contig1283:11779..11995 | 1622929013.417069-CDS-H-canaliculatus_F_contig1283:11779..11995 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1283 11780..11995 - |
| 1696845647.2595985-CDS-H-canaliculatus_F_contig1283:11779..11995 | 1696845647.2595985-CDS-H-canaliculatus_F_contig1283:11779..11995 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1283 11780..11995 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1283.2360.1 >prot_H-canaliculatus_F_contig1283.2360.1 ID=prot_H-canaliculatus_F_contig1283.2360.1|Name=mRNA_H-canaliculatus_F_contig1283.2360.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=131bp
PVHNRTPSRVRRAPNREATPAPRSLPARSAAASRPSSCTKSRRPLTPASA
AFTPEGPLFESVGRRVADRDGRVMSLGPIAESAMSTQISFGISLPRGRFV
ARLLRHAVRSGGLLYAWRGVFLLEHPPEFS* back to topmRNA from alignment at H-canaliculatus_F_contig1283:8775..11995- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig1283.2360.1 ID=mRNA_H-canaliculatus_F_contig1283.2360.1|Name=mRNA_H-canaliculatus_F_contig1283.2360.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3221bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1283:8775..11995- (Hapterophycus canaliculatus Oshoro5f female)
CCCGTCCATAATAGAACGCCCTCCAGGGTTCGCCGGGCTCCAAACAGGGA
AGCTACGCCTGCGCCTCGATCGCTACCGGCGAGATCTGCCGCAGCTTCGA
GGCCATCTTCGTGTACGAAATCGAGAAGGCCCCTCACTCCTGCCTCGGCT
GCTTTTACGCCCGAAGGGCCACTCTTTGAATCCGTCGGCCGCCGGGTTGC
CGACCGCGACGGCAGGGTGAGAGCGGCAGTAGGAGTTATCCCTGCCGAAA
GTTGCCTCGTCTGTCGGCATTTTGGTGGTCGCCGACGCATGAAAGACTTC
CTAGCAACGAGCCACGAGGCCGTCGGTTGTTTGGCTGAGAATTCGTCTCT
TACTGGCGCATCGTTGCTAGCTGCAATCGTCAAACCGACCCTATCTCATT
CTGGATTTATAAGTAACCACGCTTCTCCTCGGCAATATGTAGCAAAGGGA
TTTCGGGGTTGCTGGTTAGCGAACTTACCCCTTCGAGTATTTGTTTGCTT
TGGCGACGGTGACAAGCTCAATCCTAGCGTGGTCATCGGGGCTACGAACG
TACGTCCAACAGTGCGTCGCCCACATCACTATCTGTCTTGTACCCAAATC
CAAGCAACAACAAACGAAGTCTGACCGTGGCACTCGTTTCTATTACGAAC
GATGGAAATTAGCTGGTTCTCAGGTTAGATGGGCTTGCGTTTGTAGACTA
TGCAGTTGAAACCCACACAGAAGCGAGCCACGGACACGATTGTGGCGTTT
GCCTTCCTTTCTTCCTTTCTAGTGCATTCATAGTCCGACGTGCGAACAAA
CCACGGCCGGTTGCATTTCGTGGTTCGCAGCTTCCATTTCTACAATGATT
GAAGGGGGGGGGCTCCCCCGTCTCAGGTATCGATCGATGACCGTGTCGCA
CACCTAAGGAATGGTCTTCGAAAAATCGCCTTGGCTTTCTCAAAGAAACC
GACGTCATTTATAACCTTATCCTCGGGAATCCTCGCGTTCGGTGGAGATC
AATTCAACCCTGGTGACGGTTACTGACGCCCAGCAGTGGGCGATAGTCGC
GGCCGATCAACGGTCACACCTCCTTCCTCACAATCTTGGGGACATTTTCG
GTGTAGATGCATGATTGTCACTGGTCGTGTCCCCCTCTCCGTTGCAGCTC
AATAAGCACCGGTTCGGACAAGCATTTCATACCTGACTCGAGAAAACACT
GGTCCCGTTTGTCTTCGTTGGCCTGTATCACCGCTCTGTCCTGTATTTGT
TATCCCGACACAGGTGATGTCCTTGGGACCGATCGCCGAGTCCGCCATGT
CCACGCAGGTGAGCGTGGGCGGTGCAGTCCGCTCTCTCGTTGTCTCACAC
CTGGTTTCAACTTGCCTCCAACTCTCGCCCGGCCTGAGCATTCTGTTTGT
TACGTTTCCGCCGCCTGTCTGCCCGGATTCTTGACCTCCTGCGTTTGGTT
TCCTTTTTCCTTCCTTCAAAAGAAAGAGTTCACAACACGAAACGAATACC
CTCCGCTGAGACAAATAATAGCGACGCAAGGGTGTTGTGCTAAATTCCTT
GCAGTGAGGGTTCAGGATGGCGGAAACATATTTCATAGTGCTAGATGAGA
CATTTAAAGCGGGTGGTTCTTTTGTTTTGTCATTGAAAGCGTGTGCTTCT
TTCGTTCACCGTATATAACACAAGATGACACCCCCCCCTCGACCGCGGAT
TTTCAAATCTCGAGTACTCCCCAGCAAGAGGCACACCAGTTTCCAAAAGG
GCGGCGTTGGAAATATCTCTTCGAGATCTGCCAGAAAACGTGTCATTTGG
TGTTGGAATCGTATTCGTTGCGGAGTACCGTAATCATGCGAAGGTTCGCA
CCGGGTGCGATCGCGTTTTTAAATGTTTCTACGTTGTGTTTTTTATCGCA
CCCCGGTCCTATCTCTCCGATGGGGGTGCGGAAACACATTAAAATTATGG
CGTTGTTCTATTTTGGCGCACCCGCGGTGCGATCTCTCCGATGGGTGCGC
TGCTGAATCGAAATACACCAGGCCGTACTGGGGCAACGGTGCTGCGTACA
TGCACCCCGCTGCGAACTCTCCGATGGGTACGATACCGAGTACCACAACA
GGTGGGTAGTTACCCACCCTTGTTGCATATGTAGGGCACAGTAAGCACAG
CAGCTAACACACACCTTACGTCACCCAAAGCGGTGTGCCGGCAAATTGAG
AATCGATCCGGCAAAATACGGTATAATACGGCACAAGATCCCGAAAAAAC
GCGGCGGAATTCCGCTGATATGCGCAGCGTCCACACAAACCCAAGGCATC
TAGACCACCCCATGCAGCATCATGTCAGAGAGTGCCGAGGCTGCCTCTTC
ATAGGCCAATGAGATGTGTGCTTGGTTGAGAGCATACAAATTAAATGACT
CAAGGCTACGTAAAATGACTTGACCTACCATGTGTTGGTAAAGTACGTTT
GAGAGGAGTGCCGCGCTGGTGATATCTCATCGGAGTTTGAAATAAATGAG
AATATTACCTACTACTATAGACCCGCTGCGGTGGCCGTCAAATTTCTATT
TATGCCGTAACGGTCGCACCCCAGTACGATCTCCCCGATGGGGGTGCGAA
AACACGATTAGATGTTTTTACCTTGTGTTTTTTATCGCACCCCGGTGCTA
TCTCTCCGATGGGTGCGAACCTTCGCATGATTACGGTAACCGAGCTTTGA
AAATAGGTCCAGGGGGTGTATTGTTTTGTGTCACATACGGTAGTCACCCT
CCTCTGATCGTGTCCTTAGTTCTTGGTGATTGCGGCATTCATTTACCACC
GCCTTGCAATCGTGTCAACAGATCAGCTTCGGGATTTCTTTGCCTCGAGG
AAGATTCGTCGCACGACTACTTCGGCACGCGGTACGGAGCGGAGGTCTAC
TTTATGCTTGGCGGGGTGGCAAGTGTTCTTGTTGGCATCGGCGTTGATTT
TCGTTTGGCCCCTTCGAGTGGGCTACCATCGTATTTATTCCCATGTTCCT
GTCGTTGGCGTACCTTTGCCGTCGATGACGACGAGAACGACAATGTTTCT
ACTGCTTCTCCTTATTGTAGCGGTTCGCATCCCAAAAATTCCTTCATGGT
CCCCGGCCTCCCTGTTTTCCCACTTATCCATACCCCGCACCCGAACCACG
CGCTTGTTCCTCCCGTCCGTGCGTCCGTTCGTCCAGTGTTTCTGCTCGAA
CACCCTCCAGAATTCTCCTGA back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig1283:8775..11995- >mRNA_H-canaliculatus_F_contig1283.2360.1 ID=mRNA_H-canaliculatus_F_contig1283.2360.1|Name=mRNA_H-canaliculatus_F_contig1283.2360.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=786bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1283:8775..11995- (Hapterophycus canaliculatus Oshoro5f female)
CCCGTCCATAATAGAACGCCCTCCAGGGTTCGCCGGGCTCCAAACAGGGA
AGCTACGCCTGCGCCTCGATCGCTACCGGCGAGATCTGCCGCAGCTTCGA
GGCCATCTTCGTGTACGAAATCGAGAAGGCCCCTCACTCCTGCCTCGGCT
GCTTTTACGCCCGAAGGGCCACTCTTTGAATCCGTCGGCCGCCGGGTTGC
CGACCGCGACGGCAGGCCCGTCCATAATAGAACGCCCTCCAGGGTTCGCC
GGGCTCCAAACAGGGAAGCTACGCCTGCGCCTCGATCGCTACCGGCGAGA
TCTGCCGCAGCTTCGAGGCCATCTTCGTGTACGAAATCGAGAAGGCCCCT
CACTCCTGCCTCGGCTGCTTTTACGCCCGAAGGGCCACTCTTTGAATCCG
TCGGCCGCCGGGTTGCCGACCGCGACGGCAGGGTGATGTCCTTGGGACCG
ATCGCCGAGTCCGCCATGTCCACGCAGGTGATGTCCTTGGGACCGATCGC
CGAGTCCGCCATGTCCACGCAGATCAGCTTCGGGATTTCTTTGCCTCGAG
GAAGATTCGTCGCACGACTACTTCGGCACGCGGTACGGAGCGGAGGTCTA
CTTTATGCTTGGCGGGGTGATCAGCTTCGGGATTTCTTTGCCTCGAGGAA
GATTCGTCGCACGACTACTTCGGCACGCGGTACGGAGCGGAGGTCTACTT
TATGCTTGGCGGGGTGTGTTTCTGCTCGAACACCCTCCAGAATTCTCCTG
ATGTTTCTGCTCGAACACCCTCCAGAATTCTCCTGA back to top
|