mRNA_H-canaliculatus_F_contig12818.2352.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12818.2352.1 vs. uniprot
Match: D7FNX8_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX8_ECTSI) HSP 1 Score: 556 bits (1432), Expect = 6.900e-185 Identity = 332/582 (57.04%), Postives = 383/582 (65.81%), Query Frame = 1
Query: 1 QVARVKPLRPRDAAQLLVDKVPTRFTKKELGLPLD--CSRNEVLAKLQGHPVLQAAGGHPGTLLRLAPLLEDHSLNDACVLQRAEKHRREYQLESNRLRAHSRASSTNSLASN--------GGNGLGPPHGAASDVGYA----GPTPTTPTSPNALRPAFSHDTHFMQQHHGPNGTHPNGDPAFFRD--SPPPMQMMQHPLLNGAGMAGVSSVHSSGLGGSSHAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQRRMTMMETLRAQEELEEPDPPQMNPEEKRAWDTARTAGLIDRGCRLVWVKATANASTHGWVYDG---SRSGGGGWTA-GLGAMXXXXXXXXXXXXGRGVARCDFVPWEYLREGLKQHLCGKLTIPSSHNEVVDDGPVGWITDLDGSGMAESGGYGAVNTPQVRWMNEDELAFVRGVLKTKQEKVRQKQERFRKQMANSGFDGVDLTLAGSSAATAADAFSGAGGEDGGHGGNEEDIVSLEAFVEFSLWWAPLMGTLSLLKNDWASTDPIRVHGFIGRLAAERKLGQMEPGTFLLRFSESKQGALVISFSEHVSSISSR 1686
+VA+VKPL+ RDAAQLL++KVPTRFTKKEL L L C+R ++L L+ HPVL+AA GHPGTLLRLAPLLEDH++NDACVL RA +HR EY+ E++ LR + RA S SLAS+ GG G+ P G ASD+ G P TPT P+ L A SHDTHF QQ P FF+D S M HPLLNGAGMAG SS+HSSG+GGS H G PQRRMT+M L AQ ELEEPDPPQM PEEKRAWDTARTAGL+DRGCRLVWVKAT NA +GW YDG S +GG GW A G GA GV D VPW+YLR GL QHLCGKLTIPSSH+EVVD+GP GW D G+ GYGAVNTPQVRWMNE+ELAFVRGVLK KQEKVR KQE+ R+Q A+ G+ G +L GSS A ADA SG D++SL+AFVEFSLWWAPLM TLSLL+NDWAST+P RVHGFI R+AAER+L + E GTFLLRFSES+ G LV+SF+EHV+ + R
Sbjct: 308 RVAKVKPLKDRDAAQLLINKVPTRFTKKELRLSLSHRCTREDILKALEAHPVLKAAEGHPGTLLRLAPLLEDHNVNDACVLHRANQHRLEYKQETHTLRRN-RAGSNTSLASSAGAAGTGMGGGGVALPSG-ASDMSLGNSMGGGRPMTPTQPHLLGHAMSHDTHFQQQQXXXXXXXXXVSP-FFQDLSSWAGGGEMHHPLLNGAGMAGGSSIHSSGIGGSGH-GIHSAAAPAAARASSHPHHHQRRHSSHPQSPTHPRQHHPQRRMTVMNQLMAQVELEEPDPPQMTPEEKRAWDTARTAGLMDRGCRLVWVKATTNALLNGWTYDGGGGSDNGGFGWPAEGAGAG--------------GVTNYDCVPWDYLRRGLMQHLCGKLTIPSSHDEVVDEGPYGWRGDASSVGVGVGNGYGAVNTPQVRWMNEEELAFVRGVLKAKQEKVRLKQEKLRQQRASRGYAGTELVSIGSSGA--ADAASGRXXXXXXXXXXXXDVISLDAFVEFSLWWAPLMPTLSLLRNDWASTNPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPR 869
BLAST of mRNA_H-canaliculatus_F_contig12818.2352.1 vs. uniprot
Match: A0A6H5KH01_9PHAE (CHAT domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH01_9PHAE) HSP 1 Score: 292 bits (748), Expect = 4.300e-86 Identity = 198/343 (57.73%), Postives = 228/343 (66.47%), Query Frame = 1
Query: 1 QVARVKPLRPRDAAQLLVDKVPTRFTKKELGLPLD--CSRNEVLAKLQGHPVLQAAGGHPGTLLRLAPLLEDHSLNDACVLQRAEKHRREYQLESNRLRAHSRASSTNSLASN--------GGNGLGPPHGAASDVGYA----GPTPTTPTSPNALRPAFSHDTHFMQQHHGP-NGTHPNGDPAFFRD--SPPPMQMMQHPLLNGAGMAGVSSVHSSGLGGSSHAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQRRMTMMETLRAQEELEEPDPPQMNPEEKRAWDTARTAGLIDRGCRLVWVKATANASTHGWVYDG---SRSGGGGWTAG 969
+VA+V+PL RDAAQLL+DKVPT+FTKKEL L L C+R ++L L+ H VL+AA GHPGTLLRLAPLLEDH++NDACVL+R + R EY+LE LR + RASS SLAS+ GG G+ P G ASD+ G P TPT P+ L A SHDTHF QQH+G NG NG FF++ S M HPLLNGAGMAG SS+HSSG+GGS H XXXXXX XXXXXXX PQRRMT++ L AQ ELEEPDPPQM P EKRAWDTARTAGL+DRGCRLVWV AT NA +GW YDG S +GG GW AG
Sbjct: 435 RVAKVRPLNDRDAAQLLLDKVPTKFTKKELRLSLSHRCTREDILKALEAHRVLKAAEGHPGTLLRLAPLLEDHNVNDACVLERVTQCRLEYKLEPQTLRRN-RASSNTSLASSVGAAGTGMGGGGVALPSG-ASDMSLGNSMGGGRPMTPTQPHFLGHAISHDTHFQQQHNGTGNG---NGASPFFQEFSSWAGGGEMHHPLLNGAGMAGGSSIHSSGIGGSGHGTHSAAXXXXXXRPSXXXXXXXRRHSAHLQSPTHPHQHRPQRRMTVVNQLMAQVELEEPDPPQMTPREKRAWDTARTAGLMDRGCRLVWVTATTNALLNGWTYDGGGGSDNGGFGWPAG 772
BLAST of mRNA_H-canaliculatus_F_contig12818.2352.1 vs. uniprot
Match: A0A6H5KJ41_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ41_9PHAE) HSP 1 Score: 247 bits (631), Expect = 1.110e-73 Identity = 133/206 (64.56%), Postives = 157/206 (76.21%), Query Frame = 1
Query: 1078 QHLCGKLTIPSSHNEVVDDGPVGWITDLD---GSGMAESGGYGAVNTPQVRWMNEDELAFVRGVLKTKQEKVRQKQERFRKQMANSGFDGVDLTLAGSSAATAADAFSGAGGEDGGHGGNEEDIVSLEAFVEFSLWWAPLMGTLSLLKNDWASTDPIRVHGFIGRLAAERKLGQMEPGTFLLRFSESKQGALVISFSEHVSSISSR 1686
QHLCG LTIPS+ +VVD+GP GW D G E GYGAVNTPQVRWMNE+ELAFVRGVLKTKQEKVR KQE+ R+Q+A+ G+ G +L GSS A A AF G DGG+G +++SLEAFVEFSLWWAPLM TLSLL+NDWAST+P RVHGFI R+AAER+L + E GTFLLRFSES+ G LV+SF+EHV+ + R
Sbjct: 2 QHLCGNLTIPSNDTKVVDEGPYGWRGDASVGFGGRGGEGNGYGAVNTPQVRWMNEEELAFVRGVLKTKQEKVRLKQEKLRQQLASRGYSGTELVSIGSSGAADA-AF----GRDGGNGNG--NVISLEAFVEFSLWWAPLMTTLSLLRNDWASTNPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPR 200
BLAST of mRNA_H-canaliculatus_F_contig12818.2352.1 vs. uniprot
Match: D7FNY6_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY6_ECTSI) HSP 1 Score: 188 bits (477), Expect = 3.030e-47 Identity = 192/609 (31.53%), Postives = 263/609 (43.19%), Query Frame = 1
Query: 1 QVARVKPLRPRDAAQLLVDKVPTRFTKKELGLPLD-CSRNEVLAKLQGHPVL----QAAGGHPGTLLRLAPLLEDHSLNDACVLQR-AEKHRREYQLESNRLRAHSR------ASSTNSLA------SNGGNGLGPPHGAASDVGYAGPTPTTPTSPNALRPAFSHDTHFMQQHH--GPNGTHPNGDPAFFRDSPPPMQMMQHPLLNGA-GMAGVSSVHSSGLGGSSHAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQRRMTMMETLRAQEELEE-PDPPQMNPEEKRAWDTARTAGLIDRGCRLVWVKATANASTHGWVYDGSRSGGGGWTAGLGAMXXXXXXXXXXXXGRGVARCDFVPWEYLREGLKQHLCGKLTIPSS------HNEV-------VDDGP---------------VGWITDLDGSGMAESGGYGAVNTPQV-RWMNEDELAFVRGVLKTKQEKVRQKQERFRKQMANSGFDGVDLT---LAGSSAATAADAFSGAGGEDGGHGGNEEDIVSLEAFVEFSLWWAPLMGTLSLLKNDWASTDPIRVHGFIGRLAAERKLGQMEPGTFLLRFSESKQGALVISFSEH 1665
+VA V+PL R A++LL+D P +ELGL S+ V++ Q HPVL + AGGHPGTL+RLAP+L + L+DAC L+ A R +++ +S R R H R A S++SLA S G+ LG S P P TP+ A+ AFS D + N T+ + D + P + G G+ H SG G R MM A+E LEE P+ PQMN E++ AWD A AG ++RGCRL+WV AT+N + W D XXXX R +FV W +LREGL+++L ++T+P S H+ + +DDG + G +G P R ++ + F+RG+L+ KQ K++AN+G VD T L G D +S+E F +FS WW PLMGTL +++NDWA T P+ VHGFIGRL + L + G FLLRFSES G LVIS + H
Sbjct: 453 RVAEVEPLETRHASELLIDNSPRDLQPEELGLQSGGLSKAHVVSAAQNHPVLKEVLEIAGGHPGTLVRLAPVLLNGPLDDACKLKEMATSCRADFRDKSYRRRGHRRSGSGTSAGSSSSLAMIAREMSEAGSSLGT-SAPTSRSQCGSPAPATPSQRPAMGNAFSEDAGHGRDRKRVSLNRTNSSIDGSXXXXXXXXXXXXXPPYPDEEDGGGGLPRAHGSGPTGRCRNPRCHGRPQQQPSLGQQSGSPPGCCLRHQFAQELRDRVAMMHRRQMM----AREALEEQPELPQMNMEQQHAWDMAEAAG-VERGCRLLWVTATSNMAND-WRRDNGXX--------------------XXXXXXASKRGEFVSWNHLREGLQRNLDVRMTVPCSSSGGDRHDALEGTQYTYLDDGQEVDSEEVXXXXXXXXXXXXXERAAGGERRTGNRRMGPLPHATRVLDRSQWGFIRGILRKKQ-----------KELANAGVQTVDCTEYRLDG-----------------------RYDFISVETFAKFSRWWVPLMGTLGIIRNDWARTRPVFVHGFIGRLETDENLRRAR-GAFLLRFSESHPGKLVISRAYH 999
BLAST of mRNA_H-canaliculatus_F_contig12818.2352.1 vs. uniprot
Match: D7FNY4_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY4_ECTSI) HSP 1 Score: 180 bits (456), Expect = 1.450e-44 Identity = 186/611 (30.44%), Postives = 252/611 (41.24%), Query Frame = 1
Query: 4 VARVKPLRPRDAAQLLVDKVPTRFTKKELGLPLD-CSRNEVLAKLQGHPVL----QAAGGHPGTLLRLAPLLEDHSLNDACVLQR-----------------------------------------AEKHRREYQLESNRLRAHSRASSTNSLASNGGNGLGPPHGAASDVGYAGPTPTTPTSPNALRPAFSHDTHFMQQHHGPNGTHPNGDPAFF-RDSPPP----------MQMMQHPLLNGAGMAGVSSVHSSGLGGSSHAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQRRMTMMETLRAQEELEEPDPPQMNPEEKRAWDTARTAGLIDRGCRLVWVKATANASTHGWVYDGSRSGGGGWTAGLGAMXXXXXXXXXXXXGRGVARCDFVPWEYLREGLKQHLC-GKLTIPSSHNEVVDDGPVGWITDLDGSGMAESGGYGAVNTPQVRWMNEDELAFVRGVLKTKQEKVRQKQERFRKQMANSGFDGVDLTLAGSSAATAADAFSGAGGEDGGHGGNEEDIVSLEAFVEFSLWWAPLMGTLSLLKNDWASTDPIRVHGFIGRLAAERKLGQMEPGTFLLRFSESKQGALVISFSE 1662
VARV+PL R A++LL+D +P ELGL S +VL +Q HPVL + A GHPGTL+RLAP+L D SL+DAC L+ +E+ R +++ +S R R + R +S + S+ G L +S G P +P + + PAF DTH + GD F RDS M P+ N G + HSS Q+ L + +EP+ PQM+ EE+R D AR AG++DRGCRLVWV AT+ + G D W++ G + V WE L+E L +HL G T + + ++ P G + D TPQ L F+RG+L+ QE V + A G G + GG D +S+EAF +FS WWAPL+ TL +++NDWA T P+RVHGF+ RLAA+R L Q E GTFLLRFSESK GALVISF++
Sbjct: 335 VARVEPLETRHASELLMDNLPRNLELTELGLESGGLSLADVLTAVQNHPVLKEVLEIAEGHPGTLVRLAPVLLDGSLDDACRLKEMTTRRVVVAARVMVWRLFEWLLLLGATKVAYNWDLATIGSLSEECRADFRDKSYRRRRYGRPNSNRTAVSSKGE-LSVTMTLSSSTG----APRSPMILSPMGPAFG-DTHDQRN---------RGDTRFLQRDSSSXXXXXXXXRAGMTSPVRPVPNETVREGPARAHSSS-----------------------PPARCRNPEWHGPPQPPPHSLLHQQLQDHRRVLAQEAPDDEPESPQMDMEEQRTRDLARAAGVVDRGCRLVWVTATSRMAG-GCRQDDXXXXXXXWSSRRGKL---------------------VSWECLQESLMEHLREGTKTTRNWDDPIIS--PHGRVAD----------------TPQ--------LEFIRGILRRGQEAVAR---------ARWGATGDECPEV--------------------DGGCRYDFISVEAFAKFSQWWAPLISTLGIIRNDWARTRPVRVHGFMSRLAAKRLLMQRECGTFLLRFSESKMGALVISFTQ 830
BLAST of mRNA_H-canaliculatus_F_contig12818.2352.1 vs. uniprot
Match: A0A6H5JPT3_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPT3_9PHAE) HSP 1 Score: 165 bits (417), Expect = 3.230e-41 Identity = 112/297 (37.71%), Postives = 151/297 (50.84%), Query Frame = 1
Query: 793 EPDPPQMNPEEKRAWDTARTAGLIDRGCRLVWVKATANASTHGWVYDGSRSGGGGWTAGLGAMXXXXXXXXXXXXGRGVARCDFVPWEYLREGLKQHLC-GKLTIPSSHNEVVDDGPVGWITDLDGSGMAESGGYGAVNTPQVRWMNEDELAFVRGVLKTKQEKVRQKQERFRKQMANSGFDGVDLTLAGSSAATAADAFSGAGGEDGGHGGNEEDIVSLEAFVEFSLWWAPLMGTLSLLKNDWASTDPIRVHGFIGRLAAERKLGQMEPGTFLLRFSESKQGALVISFSEHVSSIS 1680
EP+ QM+ +E+RAWD AR AG++DRGCRL+WV AT+ + G D GGGW++ R + V WE L+E L +HL G T + + ++ P G + D TPQ L F+RG+L+ QE V + A G G + T G G +D VS+EAF FS WWAPLM TL +++NDWA+T P+RVHGF+ R+A++R L Q E GTFLLRFSES+ GALVISF++ S+S
Sbjct: 120 EPESSQMDLKEQRAWDLARAAGVVDRGCRLIWVTATSRMA-RGCRQDDGGGSGGGWSS---------------------RRGEIVSWECLQESLMEHLREGTKTTRNWDDPIIL--PHGRVVD----------------TPQ--------LEFIRGILRRGQEAVAK---------ARWGATGDECTEVG--------------------GDGRDDFVSVEAFANFSQWWAPLMATLGIIRNDWATTRPVRVHGFMSRVASKRLLMQRECGTFLLRFSESRMGALVISFTQPSVSVS 339
BLAST of mRNA_H-canaliculatus_F_contig12818.2352.1 vs. uniprot
Match: A0A6H5KC67_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC67_9PHAE) HSP 1 Score: 157 bits (397), Expect = 6.220e-37 Identity = 183/610 (30.00%), Postives = 250/610 (40.98%), Query Frame = 1
Query: 4 VARVKPLRPRDAAQLLVDKVPTRFTKKELGLPLD-CSRNEVLAKLQGHPVLQA----AGGHPGTLLRLAPLLEDHSLNDACVLQR-AEKHRREYQLESNRLRAHSRASSTNSLASNG--------GNGLGPPHGAASDVGYAGPTPTTPTSPNALRPAFSHDTHFMQQHH--GPNGTHPNGDPAFFRDSPPPMQMMQHPLLNGA-------GMAGVSSVHSSGLGGSSHAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQRRMTMMETLRAQEELEEPDPPQMNPEEKRAWDTARTAGLIDRGCRLVWVKATANASTHGWVYDGSRS----GGGGWTAGLGAMXXXXXXXXXXXXGRGVARCDFVPWEYLREGLKQHLCGKLTIPSS-------------HNEVVDDGPVGWITDLD----------------GSGMAESGGYGAVNTPQVRWMNEDELAFVRGVLKTKQEKVRQKQERFRKQMANSGFDGVDLTLAGSSAATAADAFSGAGGEDGGHGGNEEDIVSLEAFVEFSLWWAPLMGTLSLLKNDWASTDPIRVHGFIGRLAAERKLGQMEPGTFLLRFSESKQGALVISFSEH 1665
VA VKPL+ + A++LL+D P +ELGL S+ +V++ ++ HPVL+ AGGHPGTL+RLAP+L SLNDA L+ A K R ++ +S R R H R+ S S S+ G+ LG S + P P TP+ A+ AFS D + N T+ + D + P G G HS +G SH +R+M E L Q EL PQMN E + AWD A A ++RG RLVW AT+ ++ D R GGGGW G GR + + VP +YL E L+ HL ++T+P S H +DDG +++ G G R ++E +L F+R +L+ K ++ K AN+ D L G ED +S+ F FS WW PLM TL ++NDWA PIRVHGFIGR A+ L +M+P FLLRFSE G LV+S + H
Sbjct: 433 VATVKPLKMQHASELLMDNSPRDLQPEELGLQSGGFSKADVVSAVENHPVLKEVLKIAGGHPGTLVRLAPVLLHGSLNDARKLKEVATKCRASFRDKSYRQRGHRRSGSCTSAGSSNVARELSEAGSSLGT-SAPTSRSPHGSPAPATPSQRPAMGNAFSEDAGHRRDRRCVSLNRTNSSIDGSGXXXXXXXXXWGTRPXXXXXXXXXEEDGGEGRPRPHSGNVG--SHGSLERHDWLQSCVHQLSLERQDEVNGMH------------RRQMLAREALEEQPEL-----PQMNTEMQHAWDMAEAA-RVERGSRLVWANATS------YMVDDRRRNKGCGGGGWGVG----------------GR-LKLGEAVPLKYLLESLRWHLDVRMTVPCSSSSGGRHDPLEGTHYTYLDDGEEVDFEEVEADDXXXXXXXDQERAAGEGRRTGNRRMRPMRHATRVLDERQLGFIRSILR--------KNQKLAKAEANTQ-DSTACELDGL-----------------------EDPISVGTFSRFSQWWTPLMVTLGNIRNDWARIWPIRVHGFIGRHEAQALL-RMKPTAFLLRFSERHPGKLVVSRACH 965
BLAST of mRNA_H-canaliculatus_F_contig12818.2352.1 vs. uniprot
Match: A0A2D4BXK4_PYTIN (SH2 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXK4_PYTIN) HSP 1 Score: 62.4 bits (150), Expect = 1.490e-6 Identity = 33/73 (45.21%), Postives = 44/73 (60.27%), Query Frame = 1
Query: 1432 EDIVSLEAFVEFSLWWAPLMGTLSLLKNDWASTDPIRVHGFIGRLAAERKLGQMEPGTFLLRFSESKQGALVI 1650
E+ VSLE F F W+APL ++ + WA T P +HGF+ + A L PGTFLLRFSE++Q +VI
Sbjct: 410 ENKVSLEMFAHFWRWFAPLTECIAFSRL-WAFTQPRLLHGFLSKGACVAMLQHAPPGTFLLRFSETRQRCVVI 481
BLAST of mRNA_H-canaliculatus_F_contig12818.2352.1 vs. uniprot
Match: A0A5D6XJL3_9STRA (SH2 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJL3_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 4.370e-6 Identity = 32/73 (43.84%), Postives = 44/73 (60.27%), Query Frame = 1
Query: 1438 IVSLEAFVEFSLWWAPLMGTLSLLKNDWASTDPIRVHGFIGRLAAERKLGQMEPGTFLLRFSESKQGALVISF 1656
VSLE F F W+APL + + WA T P +HGF+ + A L + PGTFLLRFSE++Q +VI++
Sbjct: 791 FVSLEMFAAFWHWFAPLTECIRYSRL-WAFTQPRLLHGFLSKGACVNMLQRAPPGTFLLRFSETRQRCVVIAY 862
BLAST of mRNA_H-canaliculatus_F_contig12818.2352.1 vs. uniprot
Match: A0A225WTC8_9STRA (SH2 domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WTC8_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 3.630e-5 Identity = 30/72 (41.67%), Postives = 42/72 (58.33%), Query Frame = 1
Query: 1441 VSLEAFVEFSLWWAPLMGTLSLLKNDWASTDPIRVHGFIGRLAAERKLGQMEPGTFLLRFSESKQGALVISF 1656
VSL F F W+ PL+ + L W T+P +HGF+ + A L + PGTFLLRFSE++ LVI++
Sbjct: 595 VSLRMFAAFWAWFRPLVDCI-LYSTLWPHTEPRLLHGFLSKGACVSMLERAPPGTFLLRFSETRVRCLVIAY 665 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12818.2352.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12818.2352.1 >prot_H-canaliculatus_F_contig12818.2352.1 ID=prot_H-canaliculatus_F_contig12818.2352.1|Name=mRNA_H-canaliculatus_F_contig12818.2352.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=562bp QVARVKPLRPRDAAQLLVDKVPTRFTKKELGLPLDCSRNEVLAKLQGHPVback to top mRNA from alignment at H-canaliculatus_F_contig12818:169..2928+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12818.2352.1 ID=mRNA_H-canaliculatus_F_contig12818.2352.1|Name=mRNA_H-canaliculatus_F_contig12818.2352.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2760bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12818:169..2928+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12818:169..2928+ >mRNA_H-canaliculatus_F_contig12818.2352.1 ID=mRNA_H-canaliculatus_F_contig12818.2352.1|Name=mRNA_H-canaliculatus_F_contig12818.2352.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3372bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12818:169..2928+ (Hapterophycus canaliculatus Oshoro5f female)back to top |