mRNA_H-canaliculatus_F_contig12818.2352.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig12818.2352.1
Unique NamemRNA_H-canaliculatus_F_contig12818.2352.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig12818.2352.1 vs. uniprot
Match: D7FNX8_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX8_ECTSI)

HSP 1 Score: 556 bits (1432), Expect = 6.900e-185
Identity = 332/582 (57.04%), Postives = 383/582 (65.81%), Query Frame = 1
Query:    1 QVARVKPLRPRDAAQLLVDKVPTRFTKKELGLPLD--CSRNEVLAKLQGHPVLQAAGGHPGTLLRLAPLLEDHSLNDACVLQRAEKHRREYQLESNRLRAHSRASSTNSLASN--------GGNGLGPPHGAASDVGYA----GPTPTTPTSPNALRPAFSHDTHFMQQHHGPNGTHPNGDPAFFRD--SPPPMQMMQHPLLNGAGMAGVSSVHSSGLGGSSHAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQRRMTMMETLRAQEELEEPDPPQMNPEEKRAWDTARTAGLIDRGCRLVWVKATANASTHGWVYDG---SRSGGGGWTA-GLGAMXXXXXXXXXXXXGRGVARCDFVPWEYLREGLKQHLCGKLTIPSSHNEVVDDGPVGWITDLDGSGMAESGGYGAVNTPQVRWMNEDELAFVRGVLKTKQEKVRQKQERFRKQMANSGFDGVDLTLAGSSAATAADAFSGAGGEDGGHGGNEEDIVSLEAFVEFSLWWAPLMGTLSLLKNDWASTDPIRVHGFIGRLAAERKLGQMEPGTFLLRFSESKQGALVISFSEHVSSISSR 1686
            +VA+VKPL+ RDAAQLL++KVPTRFTKKEL L L   C+R ++L  L+ HPVL+AA GHPGTLLRLAPLLEDH++NDACVL RA +HR EY+ E++ LR + RA S  SLAS+        GG G+  P G ASD+       G  P TPT P+ L  A SHDTHF QQ            P FF+D  S      M HPLLNGAGMAG SS+HSSG+GGS H G                                     PQRRMT+M  L AQ ELEEPDPPQM PEEKRAWDTARTAGL+DRGCRLVWVKAT NA  +GW YDG   S +GG GW A G GA               GV   D VPW+YLR GL QHLCGKLTIPSSH+EVVD+GP GW  D    G+    GYGAVNTPQVRWMNE+ELAFVRGVLK KQEKVR KQE+ R+Q A+ G+ G +L   GSS A  ADA SG             D++SL+AFVEFSLWWAPLM TLSLL+NDWAST+P RVHGFI R+AAER+L + E GTFLLRFSES+ G LV+SF+EHV+  + R
Sbjct:  308 RVAKVKPLKDRDAAQLLINKVPTRFTKKELRLSLSHRCTREDILKALEAHPVLKAAEGHPGTLLRLAPLLEDHNVNDACVLHRANQHRLEYKQETHTLRRN-RAGSNTSLASSAGAAGTGMGGGGVALPSG-ASDMSLGNSMGGGRPMTPTQPHLLGHAMSHDTHFQQQQXXXXXXXXXVSP-FFQDLSSWAGGGEMHHPLLNGAGMAGGSSIHSSGIGGSGH-GIHSAAAPAAARASSHPHHHQRRHSSHPQSPTHPRQHHPQRRMTVMNQLMAQVELEEPDPPQMTPEEKRAWDTARTAGLMDRGCRLVWVKATTNALLNGWTYDGGGGSDNGGFGWPAEGAGAG--------------GVTNYDCVPWDYLRRGLMQHLCGKLTIPSSHDEVVDEGPYGWRGDASSVGVGVGNGYGAVNTPQVRWMNEEELAFVRGVLKAKQEKVRLKQEKLRQQRASRGYAGTELVSIGSSGA--ADAASGRXXXXXXXXXXXXDVISLDAFVEFSLWWAPLMPTLSLLRNDWASTNPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPR 869          
BLAST of mRNA_H-canaliculatus_F_contig12818.2352.1 vs. uniprot
Match: A0A6H5KH01_9PHAE (CHAT domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH01_9PHAE)

HSP 1 Score: 292 bits (748), Expect = 4.300e-86
Identity = 198/343 (57.73%), Postives = 228/343 (66.47%), Query Frame = 1
Query:    1 QVARVKPLRPRDAAQLLVDKVPTRFTKKELGLPLD--CSRNEVLAKLQGHPVLQAAGGHPGTLLRLAPLLEDHSLNDACVLQRAEKHRREYQLESNRLRAHSRASSTNSLASN--------GGNGLGPPHGAASDVGYA----GPTPTTPTSPNALRPAFSHDTHFMQQHHGP-NGTHPNGDPAFFRD--SPPPMQMMQHPLLNGAGMAGVSSVHSSGLGGSSHAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQRRMTMMETLRAQEELEEPDPPQMNPEEKRAWDTARTAGLIDRGCRLVWVKATANASTHGWVYDG---SRSGGGGWTAG 969
            +VA+V+PL  RDAAQLL+DKVPT+FTKKEL L L   C+R ++L  L+ H VL+AA GHPGTLLRLAPLLEDH++NDACVL+R  + R EY+LE   LR + RASS  SLAS+        GG G+  P G ASD+       G  P TPT P+ L  A SHDTHF QQH+G  NG   NG   FF++  S      M HPLLNGAGMAG SS+HSSG+GGS H      XXXXXX   XXXXXXX                 PQRRMT++  L AQ ELEEPDPPQM P EKRAWDTARTAGL+DRGCRLVWV AT NA  +GW YDG   S +GG GW AG
Sbjct:  435 RVAKVRPLNDRDAAQLLLDKVPTKFTKKELRLSLSHRCTREDILKALEAHRVLKAAEGHPGTLLRLAPLLEDHNVNDACVLERVTQCRLEYKLEPQTLRRN-RASSNTSLASSVGAAGTGMGGGGVALPSG-ASDMSLGNSMGGGRPMTPTQPHFLGHAISHDTHFQQQHNGTGNG---NGASPFFQEFSSWAGGGEMHHPLLNGAGMAGGSSIHSSGIGGSGHGTHSAAXXXXXXRPSXXXXXXXRRHSAHLQSPTHPHQHRPQRRMTVVNQLMAQVELEEPDPPQMTPREKRAWDTARTAGLMDRGCRLVWVTATTNALLNGWTYDGGGGSDNGGFGWPAG 772          
BLAST of mRNA_H-canaliculatus_F_contig12818.2352.1 vs. uniprot
Match: A0A6H5KJ41_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ41_9PHAE)

HSP 1 Score: 247 bits (631), Expect = 1.110e-73
Identity = 133/206 (64.56%), Postives = 157/206 (76.21%), Query Frame = 1
Query: 1078 QHLCGKLTIPSSHNEVVDDGPVGWITDLD---GSGMAESGGYGAVNTPQVRWMNEDELAFVRGVLKTKQEKVRQKQERFRKQMANSGFDGVDLTLAGSSAATAADAFSGAGGEDGGHGGNEEDIVSLEAFVEFSLWWAPLMGTLSLLKNDWASTDPIRVHGFIGRLAAERKLGQMEPGTFLLRFSESKQGALVISFSEHVSSISSR 1686
            QHLCG LTIPS+  +VVD+GP GW  D     G    E  GYGAVNTPQVRWMNE+ELAFVRGVLKTKQEKVR KQE+ R+Q+A+ G+ G +L   GSS A  A AF    G DGG+G    +++SLEAFVEFSLWWAPLM TLSLL+NDWAST+P RVHGFI R+AAER+L + E GTFLLRFSES+ G LV+SF+EHV+  + R
Sbjct:    2 QHLCGNLTIPSNDTKVVDEGPYGWRGDASVGFGGRGGEGNGYGAVNTPQVRWMNEEELAFVRGVLKTKQEKVRLKQEKLRQQLASRGYSGTELVSIGSSGAADA-AF----GRDGGNGNG--NVISLEAFVEFSLWWAPLMTTLSLLRNDWASTNPTRVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPR 200          
BLAST of mRNA_H-canaliculatus_F_contig12818.2352.1 vs. uniprot
Match: D7FNY6_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY6_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 3.030e-47
Identity = 192/609 (31.53%), Postives = 263/609 (43.19%), Query Frame = 1
Query:    1 QVARVKPLRPRDAAQLLVDKVPTRFTKKELGLPLD-CSRNEVLAKLQGHPVL----QAAGGHPGTLLRLAPLLEDHSLNDACVLQR-AEKHRREYQLESNRLRAHSR------ASSTNSLA------SNGGNGLGPPHGAASDVGYAGPTPTTPTSPNALRPAFSHDTHFMQQHH--GPNGTHPNGDPAFFRDSPPPMQMMQHPLLNGA-GMAGVSSVHSSGLGGSSHAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQRRMTMMETLRAQEELEE-PDPPQMNPEEKRAWDTARTAGLIDRGCRLVWVKATANASTHGWVYDGSRSGGGGWTAGLGAMXXXXXXXXXXXXGRGVARCDFVPWEYLREGLKQHLCGKLTIPSS------HNEV-------VDDGP---------------VGWITDLDGSGMAESGGYGAVNTPQV-RWMNEDELAFVRGVLKTKQEKVRQKQERFRKQMANSGFDGVDLT---LAGSSAATAADAFSGAGGEDGGHGGNEEDIVSLEAFVEFSLWWAPLMGTLSLLKNDWASTDPIRVHGFIGRLAAERKLGQMEPGTFLLRFSESKQGALVISFSEH 1665
            +VA V+PL  R A++LL+D  P     +ELGL     S+  V++  Q HPVL    + AGGHPGTL+RLAP+L +  L+DAC L+  A   R +++ +S R R H R      A S++SLA      S  G+ LG      S      P P TP+   A+  AFS D    +       N T+ + D +              P  +   G  G+   H SG  G                                             R  MM    A+E LEE P+ PQMN E++ AWD A  AG ++RGCRL+WV AT+N +   W  D                        XXXX     R +FV W +LREGL+++L  ++T+P S      H+ +       +DDG                     +    G   +G       P   R ++  +  F+RG+L+ KQ           K++AN+G   VD T   L G                         D +S+E F +FS WW PLMGTL +++NDWA T P+ VHGFIGRL  +  L +   G FLLRFSES  G LVIS + H
Sbjct:  453 RVAEVEPLETRHASELLIDNSPRDLQPEELGLQSGGLSKAHVVSAAQNHPVLKEVLEIAGGHPGTLVRLAPVLLNGPLDDACKLKEMATSCRADFRDKSYRRRGHRRSGSGTSAGSSSSLAMIAREMSEAGSSLGT-SAPTSRSQCGSPAPATPSQRPAMGNAFSEDAGHGRDRKRVSLNRTNSSIDGSXXXXXXXXXXXXXPPYPDEEDGGGGLPRAHGSGPTGRCRNPRCHGRPQQQPSLGQQSGSPPGCCLRHQFAQELRDRVAMMHRRQMM----AREALEEQPELPQMNMEQQHAWDMAEAAG-VERGCRLLWVTATSNMAND-WRRDNGXX--------------------XXXXXXASKRGEFVSWNHLREGLQRNLDVRMTVPCSSSGGDRHDALEGTQYTYLDDGQEVDSEEVXXXXXXXXXXXXXERAAGGERRTGNRRMGPLPHATRVLDRSQWGFIRGILRKKQ-----------KELANAGVQTVDCTEYRLDG-----------------------RYDFISVETFAKFSRWWVPLMGTLGIIRNDWARTRPVFVHGFIGRLETDENLRRAR-GAFLLRFSESHPGKLVISRAYH 999          
BLAST of mRNA_H-canaliculatus_F_contig12818.2352.1 vs. uniprot
Match: D7FNY4_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY4_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 1.450e-44
Identity = 186/611 (30.44%), Postives = 252/611 (41.24%), Query Frame = 1
Query:    4 VARVKPLRPRDAAQLLVDKVPTRFTKKELGLPLD-CSRNEVLAKLQGHPVL----QAAGGHPGTLLRLAPLLEDHSLNDACVLQR-----------------------------------------AEKHRREYQLESNRLRAHSRASSTNSLASNGGNGLGPPHGAASDVGYAGPTPTTPTSPNALRPAFSHDTHFMQQHHGPNGTHPNGDPAFF-RDSPPP----------MQMMQHPLLNGAGMAGVSSVHSSGLGGSSHAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQRRMTMMETLRAQEELEEPDPPQMNPEEKRAWDTARTAGLIDRGCRLVWVKATANASTHGWVYDGSRSGGGGWTAGLGAMXXXXXXXXXXXXGRGVARCDFVPWEYLREGLKQHLC-GKLTIPSSHNEVVDDGPVGWITDLDGSGMAESGGYGAVNTPQVRWMNEDELAFVRGVLKTKQEKVRQKQERFRKQMANSGFDGVDLTLAGSSAATAADAFSGAGGEDGGHGGNEEDIVSLEAFVEFSLWWAPLMGTLSLLKNDWASTDPIRVHGFIGRLAAERKLGQMEPGTFLLRFSESKQGALVISFSE 1662
            VARV+PL  R A++LL+D +P      ELGL     S  +VL  +Q HPVL    + A GHPGTL+RLAP+L D SL+DAC L+                                          +E+ R +++ +S R R + R +S  +  S+ G  L      +S  G     P +P   + + PAF  DTH  +           GD  F  RDS             M     P+ N     G +  HSS                                               Q+       L  +   +EP+ PQM+ EE+R  D AR AG++DRGCRLVWV AT+  +  G   D        W++  G +                     V WE L+E L +HL  G  T  +  + ++   P G + D                TPQ        L F+RG+L+  QE V +         A  G  G +                         GG   D +S+EAF +FS WWAPL+ TL +++NDWA T P+RVHGF+ RLAA+R L Q E GTFLLRFSESK GALVISF++
Sbjct:  335 VARVEPLETRHASELLMDNLPRNLELTELGLESGGLSLADVLTAVQNHPVLKEVLEIAEGHPGTLVRLAPVLLDGSLDDACRLKEMTTRRVVVAARVMVWRLFEWLLLLGATKVAYNWDLATIGSLSEECRADFRDKSYRRRRYGRPNSNRTAVSSKGE-LSVTMTLSSSTG----APRSPMILSPMGPAFG-DTHDQRN---------RGDTRFLQRDSSSXXXXXXXXRAGMTSPVRPVPNETVREGPARAHSSS-----------------------PPARCRNPEWHGPPQPPPHSLLHQQLQDHRRVLAQEAPDDEPESPQMDMEEQRTRDLARAAGVVDRGCRLVWVTATSRMAG-GCRQDDXXXXXXXWSSRRGKL---------------------VSWECLQESLMEHLREGTKTTRNWDDPIIS--PHGRVAD----------------TPQ--------LEFIRGILRRGQEAVAR---------ARWGATGDECPEV--------------------DGGCRYDFISVEAFAKFSQWWAPLISTLGIIRNDWARTRPVRVHGFMSRLAAKRLLMQRECGTFLLRFSESKMGALVISFTQ 830          
BLAST of mRNA_H-canaliculatus_F_contig12818.2352.1 vs. uniprot
Match: A0A6H5JPT3_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPT3_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 3.230e-41
Identity = 112/297 (37.71%), Postives = 151/297 (50.84%), Query Frame = 1
Query:  793 EPDPPQMNPEEKRAWDTARTAGLIDRGCRLVWVKATANASTHGWVYDGSRSGGGGWTAGLGAMXXXXXXXXXXXXGRGVARCDFVPWEYLREGLKQHLC-GKLTIPSSHNEVVDDGPVGWITDLDGSGMAESGGYGAVNTPQVRWMNEDELAFVRGVLKTKQEKVRQKQERFRKQMANSGFDGVDLTLAGSSAATAADAFSGAGGEDGGHGGNEEDIVSLEAFVEFSLWWAPLMGTLSLLKNDWASTDPIRVHGFIGRLAAERKLGQMEPGTFLLRFSESKQGALVISFSEHVSSIS 1680
            EP+  QM+ +E+RAWD AR AG++DRGCRL+WV AT+  +  G   D     GGGW++                      R + V WE L+E L +HL  G  T  +  + ++   P G + D                TPQ        L F+RG+L+  QE V +         A  G  G + T  G                    G   +D VS+EAF  FS WWAPLM TL +++NDWA+T P+RVHGF+ R+A++R L Q E GTFLLRFSES+ GALVISF++   S+S
Sbjct:  120 EPESSQMDLKEQRAWDLARAAGVVDRGCRLIWVTATSRMA-RGCRQDDGGGSGGGWSS---------------------RRGEIVSWECLQESLMEHLREGTKTTRNWDDPIIL--PHGRVVD----------------TPQ--------LEFIRGILRRGQEAVAK---------ARWGATGDECTEVG--------------------GDGRDDFVSVEAFANFSQWWAPLMATLGIIRNDWATTRPVRVHGFMSRVASKRLLMQRECGTFLLRFSESRMGALVISFTQPSVSVS 339          
BLAST of mRNA_H-canaliculatus_F_contig12818.2352.1 vs. uniprot
Match: A0A6H5KC67_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC67_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 6.220e-37
Identity = 183/610 (30.00%), Postives = 250/610 (40.98%), Query Frame = 1
Query:    4 VARVKPLRPRDAAQLLVDKVPTRFTKKELGLPLD-CSRNEVLAKLQGHPVLQA----AGGHPGTLLRLAPLLEDHSLNDACVLQR-AEKHRREYQLESNRLRAHSRASSTNSLASNG--------GNGLGPPHGAASDVGYAGPTPTTPTSPNALRPAFSHDTHFMQQHH--GPNGTHPNGDPAFFRDSPPPMQMMQHPLLNGA-------GMAGVSSVHSSGLGGSSHAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQRRMTMMETLRAQEELEEPDPPQMNPEEKRAWDTARTAGLIDRGCRLVWVKATANASTHGWVYDGSRS----GGGGWTAGLGAMXXXXXXXXXXXXGRGVARCDFVPWEYLREGLKQHLCGKLTIPSS-------------HNEVVDDGPVGWITDLD----------------GSGMAESGGYGAVNTPQVRWMNEDELAFVRGVLKTKQEKVRQKQERFRKQMANSGFDGVDLTLAGSSAATAADAFSGAGGEDGGHGGNEEDIVSLEAFVEFSLWWAPLMGTLSLLKNDWASTDPIRVHGFIGRLAAERKLGQMEPGTFLLRFSESKQGALVISFSEH 1665
            VA VKPL+ + A++LL+D  P     +ELGL     S+ +V++ ++ HPVL+     AGGHPGTL+RLAP+L   SLNDA  L+  A K R  ++ +S R R H R+ S  S  S+         G+ LG      S   +  P P TP+   A+  AFS D    +       N T+ + D +              P            G  G    HS  +G  SH                                        +R+M   E L  Q EL     PQMN E + AWD A  A  ++RG RLVW  AT+      ++ D  R     GGGGW  G                GR +   + VP +YL E L+ HL  ++T+P S             H   +DDG      +++                G G               R ++E +L F+R +L+        K ++  K  AN+  D     L G                        ED +S+  F  FS WW PLM TL  ++NDWA   PIRVHGFIGR  A+  L +M+P  FLLRFSE   G LV+S + H
Sbjct:  433 VATVKPLKMQHASELLMDNSPRDLQPEELGLQSGGFSKADVVSAVENHPVLKEVLKIAGGHPGTLVRLAPVLLHGSLNDARKLKEVATKCRASFRDKSYRQRGHRRSGSCTSAGSSNVARELSEAGSSLGT-SAPTSRSPHGSPAPATPSQRPAMGNAFSEDAGHRRDRRCVSLNRTNSSIDGSGXXXXXXXXXWGTRPXXXXXXXXXEEDGGEGRPRPHSGNVG--SHGSLERHDWLQSCVHQLSLERQDEVNGMH------------RRQMLAREALEEQPEL-----PQMNTEMQHAWDMAEAA-RVERGSRLVWANATS------YMVDDRRRNKGCGGGGWGVG----------------GR-LKLGEAVPLKYLLESLRWHLDVRMTVPCSSSSGGRHDPLEGTHYTYLDDGEEVDFEEVEADDXXXXXXXDQERAAGEGRRTGNRRMRPMRHATRVLDERQLGFIRSILR--------KNQKLAKAEANTQ-DSTACELDGL-----------------------EDPISVGTFSRFSQWWTPLMVTLGNIRNDWARIWPIRVHGFIGRHEAQALL-RMKPTAFLLRFSERHPGKLVVSRACH 965          
BLAST of mRNA_H-canaliculatus_F_contig12818.2352.1 vs. uniprot
Match: A0A2D4BXK4_PYTIN (SH2 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXK4_PYTIN)

HSP 1 Score: 62.4 bits (150), Expect = 1.490e-6
Identity = 33/73 (45.21%), Postives = 44/73 (60.27%), Query Frame = 1
Query: 1432 EDIVSLEAFVEFSLWWAPLMGTLSLLKNDWASTDPIRVHGFIGRLAAERKLGQMEPGTFLLRFSESKQGALVI 1650
            E+ VSLE F  F  W+APL   ++  +  WA T P  +HGF+ + A    L    PGTFLLRFSE++Q  +VI
Sbjct:  410 ENKVSLEMFAHFWRWFAPLTECIAFSRL-WAFTQPRLLHGFLSKGACVAMLQHAPPGTFLLRFSETRQRCVVI 481          
BLAST of mRNA_H-canaliculatus_F_contig12818.2352.1 vs. uniprot
Match: A0A5D6XJL3_9STRA (SH2 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJL3_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 4.370e-6
Identity = 32/73 (43.84%), Postives = 44/73 (60.27%), Query Frame = 1
Query: 1438 IVSLEAFVEFSLWWAPLMGTLSLLKNDWASTDPIRVHGFIGRLAAERKLGQMEPGTFLLRFSESKQGALVISF 1656
             VSLE F  F  W+APL   +   +  WA T P  +HGF+ + A    L +  PGTFLLRFSE++Q  +VI++
Sbjct:  791 FVSLEMFAAFWHWFAPLTECIRYSRL-WAFTQPRLLHGFLSKGACVNMLQRAPPGTFLLRFSETRQRCVVIAY 862          
BLAST of mRNA_H-canaliculatus_F_contig12818.2352.1 vs. uniprot
Match: A0A225WTC8_9STRA (SH2 domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WTC8_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 3.630e-5
Identity = 30/72 (41.67%), Postives = 42/72 (58.33%), Query Frame = 1
Query: 1441 VSLEAFVEFSLWWAPLMGTLSLLKNDWASTDPIRVHGFIGRLAAERKLGQMEPGTFLLRFSESKQGALVISF 1656
            VSL  F  F  W+ PL+  + L    W  T+P  +HGF+ + A    L +  PGTFLLRFSE++   LVI++
Sbjct:  595 VSLRMFAAFWAWFRPLVDCI-LYSTLWPHTEPRLLHGFLSKGACVSMLERAPPGTFLLRFSETRVRCLVIAY 665          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12818.2352.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7FNX8_ECTSI6.900e-18557.04SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KH01_9PHAE4.300e-8657.73CHAT domain-containing protein (Fragment) n=1 Tax=... [more]
A0A6H5KJ41_9PHAE1.110e-7364.56SH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FNY6_ECTSI3.030e-4731.53SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
D7FNY4_ECTSI1.450e-4430.44SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JPT3_9PHAE3.230e-4137.71SH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KC67_9PHAE6.220e-3730.00SH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A2D4BXK4_PYTIN1.490e-645.21SH2 domain-containing protein n=1 Tax=Pythium insi... [more]
A0A5D6XJL3_9STRA4.370e-643.84SH2 domain-containing protein n=1 Tax=Pythium bras... [more]
A0A225WTC8_9STRA3.630e-541.67SH2 domain-containing protein n=1 Tax=Phytophthora... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12818contigH-canaliculatus_F_contig12818:169..2928 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score561.6
Seed ortholog evalue4.1e-157
Seed eggNOG ortholog2880.D7FNX8
EggNOG OGs28NM8@1,2QV6X@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size1686
Cds size1686
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12818.2352.1prot_H-canaliculatus_F_contig12818.2352.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig12818 169..2928 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929012.1806736-CDS-H-canaliculatus_F_contig12818:168..3511622929012.1806736-CDS-H-canaliculatus_F_contig12818:168..351Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12818 169..351 +
1696845646.8064976-CDS-H-canaliculatus_F_contig12818:168..3511696845646.8064976-CDS-H-canaliculatus_F_contig12818:168..351Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12818 169..351 +
1622929012.1991522-CDS-H-canaliculatus_F_contig12818:889..9571622929012.1991522-CDS-H-canaliculatus_F_contig12818:889..957Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12818 890..957 +
1696845646.8208644-CDS-H-canaliculatus_F_contig12818:889..9571696845646.8208644-CDS-H-canaliculatus_F_contig12818:889..957Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12818 890..957 +
1622929012.2116268-CDS-H-canaliculatus_F_contig12818:1493..29281622929012.2116268-CDS-H-canaliculatus_F_contig12818:1493..2928Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12818 1494..2928 +
1696845646.8610575-CDS-H-canaliculatus_F_contig12818:1493..29281696845646.8610575-CDS-H-canaliculatus_F_contig12818:1493..2928Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12818 1494..2928 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig12818.2352.1

>prot_H-canaliculatus_F_contig12818.2352.1 ID=prot_H-canaliculatus_F_contig12818.2352.1|Name=mRNA_H-canaliculatus_F_contig12818.2352.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=562bp
QVARVKPLRPRDAAQLLVDKVPTRFTKKELGLPLDCSRNEVLAKLQGHPV
LQAAGGHPGTLLRLAPLLEDHSLNDACVLQRAEKHRREYQLESNRLRAHS
RASSTNSLASNGGNGLGPPHGAASDVGYAGPTPTTPTSPNALRPAFSHDT
HFMQQHHGPNGTHPNGDPAFFRDSPPPMQMMQHPLLNGAGMAGVSSVHSS
GLGGSSHAGSHASSHAQHHRRHSAHPLSPTHSQHHSHHRPHHQPSHPQRR
MTMMETLRAQEELEEPDPPQMNPEEKRAWDTARTAGLIDRGCRLVWVKAT
ANASTHGWVYDGSRSGGGGWTAGLGAMGVGGVGAGGAGGGRGVARCDFVP
WEYLREGLKQHLCGKLTIPSSHNEVVDDGPVGWITDLDGSGMAESGGYGA
VNTPQVRWMNEDELAFVRGVLKTKQEKVRQKQERFRKQMANSGFDGVDLT
LAGSSAATAADAFSGAGGEDGGHGGNEEDIVSLEAFVEFSLWWAPLMGTL
SLLKNDWASTDPIRVHGFIGRLAAERKLGQMEPGTFLLRFSESKQGALVI
SFSEHVSSISSR
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mRNA from alignment at H-canaliculatus_F_contig12818:169..2928+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig12818.2352.1 ID=mRNA_H-canaliculatus_F_contig12818.2352.1|Name=mRNA_H-canaliculatus_F_contig12818.2352.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2760bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12818:169..2928+ (Hapterophycus canaliculatus Oshoro5f female)
CAGGTGGCGAGAGTAAAGCCTCTGCGACCCAGAGACGCTGCGCAGCTCCT GGTGGACAAGGTGCCGACGCGCTTCACCAAGAAGGAGCTGGGCCTTCCGC TGGACTGTTCGCGCAATGAAGTACTGGCGAAGTTGCAGGGGCACCCGGTT TTGCAGGCGGCGGGCGGACATCCGGGGACGCTGGTGAGACATCTAACCAC CCCGTCCTTTCTTCACCGCGCCGGGAGGGACCGGCAGCGCGAGGGAGGGG GACGGCGTGAGGAGGGGGGAGGGGTCGGGAGGAGTCAGCGAACGTAAAAT AATGTGAAAGGTGATAAATTTTGGGGCCGTTTCTGATGGTGATCCGATTA TCACTACCTTTGTTGGGCATGCGCTCCAGGAACGACTGCTGTGGTGAAGT GTAGGAGGTCGGACCTCTCGTCGCCCGACCTGCGATCACCGAGCCAACCT TTTGTCTTGTGGCGACGAGTTGTACAGGCGCCTGCCGAGGCGATCGACGC AGGAGTTGCAAGGAATGCTTAACCTGGAGTCTCTCAGAAGCACGGCTACA CACGAGAGGGACAGCTTCAGCCAGGAAATAAAAGCTGTGATCCGCGGTGC CTGTGTGCCGGTCTGTTCGGCAGATGCTGGTCGTGGTTCGGCTAAACCTT GACGAAGCGTTGACCCGCTTTCTCTGTCTACCTGCACGTACCTTGCTCTA CTTTTTTTTGTTTTTGCGCAGTTGCGACTCGCCCCGCTTCTTGAGGACCA CAGCCTGAACGACGCGTGCGTCTTGCAACGGGCGGAAAAGTAAGTCGCCG GTAAGAGCCTGCCCACGGCCGGTGACGCGAGGTGCTGCTCCCGCGTGGCC AGGCGTGGAAGGCTCTTCTCCGTGCAGCCGGTGTCGTGCAGCTTGTTGCG ACCGCGTAGACGGTGGTTGCCGACCGACTTTCTGTCTGGGGTTGTGTGTC TTGCGTGTGGGCAGCGATGAGCAGACTGGCCCCCGCGTCTCCCCCGATTT CGAGGAGAGTTGATGAATCGTGGGCGCGACGAGATATTTGCTGGGGTCTT TTTGCCCTCGTCGCGGGGTTCATCTCCGTGCCAGGAGTGTGGTTTGTACG TATGAAAGGCGGTCTTCATCGTGCGTCGCCAGGGTGGGGGGGGGAGCGGG AATAAGTCGGTGTGCGCCAACAGTCATGCTCGGACCTCGCGAGCGGATCT CCAGGTCGTTTACTATTTTCACCATCGTTGGTGTGCTCACGTCCATTATT TATTTCGACACAGGCATCTATCTCCCTTCTCTTACCCAAGACCGCGCTCC GCCCATCTCTCGTCTATGCTAAAAGGCATCGCCGCGAGTACCAGCTGGAA TCGAACCGGCTCAGAGCACACAGCCGAGCAAGCTCCACCAACTCCCTGGC GAGCAACGGCGGCAACGGGTTGGGGCCCCCGCATGGCGCAGCGAGCGACG TTGGCTACGCGGGGCCAACGCCGACGACACCCACGTCGCCGAACGCGCTG AGGCCCGCGTTCAGCCACGACACCCACTTCATGCAGCAACATCACGGCCC CAACGGTACACATCCGAACGGCGATCCGGCGTTTTTCCGAGACAGCCCGC CGCCCATGCAGATGATGCAGCACCCCCTGCTGAACGGGGCCGGCATGGCC GGGGTCTCCAGCGTGCACAGCTCCGGGTTGGGCGGCAGCAGCCACGCGGG CAGCCACGCGAGCAGCCACGCTCAGCACCACAGGCGGCACTCCGCCCACC CTCTCTCGCCGACCCACTCGCAGCACCACTCCCACCATCGCCCCCACCAC CAGCCCTCGCACCCGCAGCGACGAATGACGATGATGGAAACCCTGAGGGC GCAGGAGGAGCTGGAGGAGCCGGACCCGCCGCAGATGAATCCGGAGGAGA AGCGTGCGTGGGACACCGCTCGCACGGCCGGGCTGATAGACCGCGGGTGC CGACTCGTCTGGGTCAAGGCCACCGCGAACGCGTCCACTCACGGCTGGGT TTACGACGGCAGCCGTAGCGGCGGCGGCGGGTGGACGGCGGGGTTGGGCG CGATGGGTGTCGGGGGGGTGGGGGCCGGGGGGGCAGGGGGAGGGAGAGGT GTGGCTCGGTGCGATTTCGTGCCGTGGGAGTACCTCCGGGAGGGGCTTAA GCAGCACCTCTGCGGGAAGCTGACGATCCCCAGCAGCCACAACGAGGTCG TGGACGACGGCCCGGTCGGCTGGATCACCGACCTCGACGGCAGCGGCATG GCGGAGAGCGGCGGGTACGGGGCGGTCAACACGCCGCAGGTGCGCTGGAT GAACGAGGACGAGCTCGCGTTCGTCCGGGGGGTGCTCAAGACCAAGCAGG AGAAGGTCCGGCAGAAGCAGGAGAGGTTCCGCAAGCAGATGGCCAACAGC GGGTTCGACGGCGTCGACCTGACGTTGGCCGGCAGCAGCGCCGCCACCGC CGCCGACGCGTTCTCGGGGGCCGGGGGAGAGGACGGCGGCCACGGCGGTA ACGAGGAGGATATTGTGTCGCTTGAGGCGTTCGTGGAGTTCTCGCTGTGG TGGGCGCCCCTGATGGGGACGCTGTCGCTGCTGAAGAACGACTGGGCGTC GACCGACCCGATCAGGGTGCACGGGTTCATTGGGAGGCTCGCGGCGGAGC GAAAGCTCGGGCAGATGGAACCGGGGACGTTCCTCCTGCGGTTTAGCGAG TCCAAGCAGGGCGCGCTGGTAATCAGCTTCTCGGAGCACGTGAGTTCGAT CTCGTCTCGG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12818:169..2928+

>mRNA_H-canaliculatus_F_contig12818.2352.1 ID=mRNA_H-canaliculatus_F_contig12818.2352.1|Name=mRNA_H-canaliculatus_F_contig12818.2352.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3372bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12818:169..2928+ (Hapterophycus canaliculatus Oshoro5f female)
CAGGTGGCGAGAGTAAAGCCTCTGCGACCCAGAGACGCTGCGCAGCTCCT
GGTGGACAAGGTGCCGACGCGCTTCACCAAGAAGGAGCTGGGCCTTCCGC
TGGACTGTTCGCGCAATGAAGTACTGGCGAAGTTGCAGGGGCACCCGGTT
TTGCAGGCGGCGGGCGGACATCCGGGGACGCTGCAGGTGGCGAGAGTAAA
GCCTCTGCGACCCAGAGACGCTGCGCAGCTCCTGGTGGACAAGGTGCCGA
CGCGCTTCACCAAGAAGGAGCTGGGCCTTCCGCTGGACTGTTCGCGCAAT
GAAGTACTGGCGAAGTTGCAGGGGCACCCGGTTTTGCAGGCGGCGGGCGG
ACATCCGGGGACGCTGTTGCGACTCGCCCCGCTTCTTGAGGACCACAGCC
TGAACGACGCGTGCGTCTTGCAACGGGCGGAAAATTGCGACTCGCCCCGC
TTCTTGAGGACCACAGCCTGAACGACGCGTGCGTCTTGCAACGGGCGGAA
AAGCATCGCCGCGAGTACCAGCTGGAATCGAACCGGCTCAGAGCACACAG
CCGAGCAAGCTCCACCAACTCCCTGGCGAGCAACGGCGGCAACGGGTTGG
GGCCCCCGCATGGCGCAGCGAGCGACGTTGGCTACGCGGGGCCAACGCCG
ACGACACCCACGTCGCCGAACGCGCTGAGGCCCGCGTTCAGCCACGACAC
CCACTTCATGCAGCAACATCACGGCCCCAACGGTACACATCCGAACGGCG
ATCCGGCGTTTTTCCGAGACAGCCCGCCGCCCATGCAGATGATGCAGCAC
CCCCTGCTGAACGGGGCCGGCATGGCCGGGGTCTCCAGCGTGCACAGCTC
CGGGTTGGGCGGCAGCAGCCACGCGGGCAGCCACGCGAGCAGCCACGCTC
AGCACCACAGGCGGCACTCCGCCCACCCTCTCTCGCCGACCCACTCGCAG
CACCACTCCCACCATCGCCCCCACCACCAGCCCTCGCACCCGCAGCGACG
AATGACGATGATGGAAACCCTGAGGGCGCAGGAGGAGCTGGAGGAGCCGG
ACCCGCCGCAGATGAATCCGGAGGAGAAGCGTGCGTGGGACACCGCTCGC
ACGGCCGGGCTGATAGACCGCGGGTGCCGACTCGTCTGGGTCAAGGCCAC
CGCGAACGCGTCCACTCACGGCTGGGTTTACGACGGCAGCCGTAGCGGCG
GCGGCGGGTGGACGGCGGGGTTGGGCGCGATGGGTGTCGGGGGGGTGGGG
GCCGGGGGGGCAGGGGGAGGGAGAGGTGTGGCTCGGTGCGATTTCGTGCC
GTGGGAGTACCTCCGGGAGGGGCTTAAGCAGCACCTCTGCGGGAAGCTGA
CGATCCCCAGCAGCCACAACGAGGTCGTGGACGACGGCCCGGTCGGCTGG
ATCACCGACCTCGACGGCAGCGGCATGGCGGAGAGCGGCGGGTACGGGGC
GGTCAACACGCCGCAGGTGCGCTGGATGAACGAGGACGAGCTCGCGTTCG
TCCGGGGGGTGCTCAAGACCAAGCAGGAGAAGGTCCGGCAGAAGCAGGAG
AGGTTCCGCAAGCAGATGGCCAACAGCGGGTTCGACGGCGTCGACCTGAC
GTTGGCCGGCAGCAGCGCCGCCACCGCCGCCGACGCGTTCTCGGGGGCCG
GGGGAGAGGACGGCGGCCACGGCGGTAACGAGGAGGATATTGTGTCGCTT
GAGGCGTTCGTGGAGTTCTCGCTGTGGTGGGCGCCCCTGATGGGGACGCT
GTCGCTGCTGAAGAACGACTGGGCGTCGACCGACCCGATCAGGGTGCACG
GGTTCATTGGGAGGCTCGCGGCGGAGCGAAAGCTCGGGCAGATGGAACCG
GGGACGTTCCTCCTGCGGTTTAGCGAGTCCAAGCAGGGCGCGCTGGTAAT
CAGCTTCTCGGAGCACGTGAGTTCGATCTCGTCTCGGGCATCGCCGCGAG
TACCAGCTGGAATCGAACCGGCTCAGAGCACACAGCCGAGCAAGCTCCAC
CAACTCCCTGGCGAGCAACGGCGGCAACGGGTTGGGGCCCCCGCATGGCG
CAGCGAGCGACGTTGGCTACGCGGGGCCAACGCCGACGACACCCACGTCG
CCGAACGCGCTGAGGCCCGCGTTCAGCCACGACACCCACTTCATGCAGCA
ACATCACGGCCCCAACGGTACACATCCGAACGGCGATCCGGCGTTTTTCC
GAGACAGCCCGCCGCCCATGCAGATGATGCAGCACCCCCTGCTGAACGGG
GCCGGCATGGCCGGGGTCTCCAGCGTGCACAGCTCCGGGTTGGGCGGCAG
CAGCCACGCGGGCAGCCACGCGAGCAGCCACGCTCAGCACCACAGGCGGC
ACTCCGCCCACCCTCTCTCGCCGACCCACTCGCAGCACCACTCCCACCAT
CGCCCCCACCACCAGCCCTCGCACCCGCAGCGACGAATGACGATGATGGA
AACCCTGAGGGCGCAGGAGGAGCTGGAGGAGCCGGACCCGCCGCAGATGA
ATCCGGAGGAGAAGCGTGCGTGGGACACCGCTCGCACGGCCGGGCTGATA
GACCGCGGGTGCCGACTCGTCTGGGTCAAGGCCACCGCGAACGCGTCCAC
TCACGGCTGGGTTTACGACGGCAGCCGTAGCGGCGGCGGCGGGTGGACGG
CGGGGTTGGGCGCGATGGGTGTCGGGGGGGTGGGGGCCGGGGGGGCAGGG
GGAGGGAGAGGTGTGGCTCGGTGCGATTTCGTGCCGTGGGAGTACCTCCG
GGAGGGGCTTAAGCAGCACCTCTGCGGGAAGCTGACGATCCCCAGCAGCC
ACAACGAGGTCGTGGACGACGGCCCGGTCGGCTGGATCACCGACCTCGAC
GGCAGCGGCATGGCGGAGAGCGGCGGGTACGGGGCGGTCAACACGCCGCA
GGTGCGCTGGATGAACGAGGACGAGCTCGCGTTCGTCCGGGGGGTGCTCA
AGACCAAGCAGGAGAAGGTCCGGCAGAAGCAGGAGAGGTTCCGCAAGCAG
ATGGCCAACAGCGGGTTCGACGGCGTCGACCTGACGTTGGCCGGCAGCAG
CGCCGCCACCGCCGCCGACGCGTTCTCGGGGGCCGGGGGAGAGGACGGCG
GCCACGGCGGTAACGAGGAGGATATTGTGTCGCTTGAGGCGTTCGTGGAG
TTCTCGCTGTGGTGGGCGCCCCTGATGGGGACGCTGTCGCTGCTGAAGAA
CGACTGGGCGTCGACCGACCCGATCAGGGTGCACGGGTTCATTGGGAGGC
TCGCGGCGGAGCGAAAGCTCGGGCAGATGGAACCGGGGACGTTCCTCCTG
CGGTTTAGCGAGTCCAAGCAGGGCGCGCTGGTAATCAGCTTCTCGGAGCA
CGTGAGTTCGATCTCGTCTCGG
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