mRNA_H-canaliculatus_F_contig1281.2343.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1281.2343.1
Unique NamemRNA_H-canaliculatus_F_contig1281.2343.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1281.2343.1 vs. uniprot
Match: A0A6H5K9J0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9J0_9PHAE)

HSP 1 Score: 474 bits (1219), Expect = 1.490e-161
Identity = 267/431 (61.95%), Postives = 304/431 (70.53%), Query Frame = 1
Query:    4 SRRAARALGLGTATLLVLTGATLPHPHPEVLVKQSCPAFCNGIPAALGCTRGLPRLVSAPGRARPATTTMAQTSGRSVVRGSPTRKEGALMAASMSVLLHDEPTSFGGRRPFTSHAARWLIKRCIHRKAVASAALNVEVEARSNRAAMTGRWESISVDFQEMIFDDIQVTGGARFELLGVDLLTLGLLPGPWRRLRRLRRPCEVTGTSRFTDVDVAYSPAIRRLAQRVVNHALRPRAKKADGGGGRAAAGAIGTGFNTNGGGSRW----------------GEGEQQHEVEPRVNVLRVRVRGNKLAIEGEMTNGGTFLRVPFRYEFSLSASRDGHILHFKGSNIYWGTPGGHVPLPMLPLQSFNVDLGDRARIEHLRIAGGILSVGGRFILTNTPGFTVAHQRFKRGSINFDLAESLSRVVSNILRLRRE 1248
            +R A R LGLGT TL+V  GA+ P  +       +     + +  A+   R LP   ++    RP    +A+   R V     T      +A ++SVLLHDEP SFGGRRPFTSHAARW IKR I   A ASAALNVEVEAR+NR AM GRWESIS+DF + IF+DIQV+GGA FELLGVD+LTLGLLPGPWRRLRRLRRPCE  G S FTDVDVAYSPAIRRLAQRVVNHAL+PRAK+A        AGA                              G  +QQ  +EP V+VL VRV GNKLAIEGEMTNGGTFLRVPFRY FSLSAS+DGH+L+FKGS++YWGTPGGHVPLPM+PLQSF +DLGDRARIEHLRI+ G+LSVGGRFILTNTPGFTVA    KRG IN+DLAE LSR+VSN L LRRE
Sbjct:    8 ARLAGRLLGLGTTTLVVAVGASSPSWNQRASSTTATAFLQSSLTIAVRPRRSLPSTAASESWVRPVVGGLAR---RPVGSSVDTNNRIKPLAMAVSVLLHDEPISFGGRRPFTSHAARWFIKRRILSTAKASAALNVEVEARNNRDAMRGRWESISIDFAKTIFEDIQVSGGA-FELLGVDVLTLGLLPGPWRRLRRLRRPCEAIGRSTFTDVDVAYSPAIRRLAQRVVNHALQPRAKRAG-----VVAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSAQQQGRLEPSVSVLGVRVHGNKLAIEGEMTNGGTFLRVPFRYHFSLSASQDGHVLYFKGSSVYWGTPGGHVPLPMMPLQSFKIDLGDRARIEHLRISRGVLSVGGRFILTNTPGFTVALPGLKRGDINYDLAEGLSRLVSNCLNLRRE 429          
BLAST of mRNA_H-canaliculatus_F_contig1281.2343.1 vs. uniprot
Match: D8LB91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB91_ECTSI)

HSP 1 Score: 447 bits (1149), Expect = 2.480e-152
Identity = 241/343 (70.26%), Postives = 263/343 (76.68%), Query Frame = 1
Query:  286 MSVLLHDEPTSFGGRRPFTSHAARWLIKRCIHRKAVASAALNVEVEARSNRAAMTGRWESISVDFQEMIFDDIQVTGGARFELLGVDLLTLGLLPGPWRRLRRLRRPCEVTGTSRFTDVDVAYSPAIRRLAQRVVNHALRPRAKKADGGGGRAAAGAIGTGFNTNGGGSRWGEG----------------------EQQHEVEPRVNVLRVRVRGNKLAIEGEMTNGGTFLRVPFRYEFSLSASRDGHILHFKGSNIYWGTPGGHVPLPMLPLQSFNVDLGDRARIEHLRIAGGILSVGGRFILTNTPGFTVAHQRFKRGSINFDLAESLSRVVSNILRLRRE 1248
            +SVLLHDEP SFGGRRPFTSHAARW IKR I   A ASAALNVEVEAR+NR AM GRWESIS+DF + IF+DIQV+GGA FELLGVD+LTLGLLPGPWRRLRRLRRPCE  G S FTDVDVAYSPAIRRLAQRVVNHALRPRAK+A      A A                                         +QQ  +EP V+VL VRV GNKLAIEGEMTNGGTFLRVPFRY FSLSAS DGH+L+FKGS++YWGTPGGHVPLPM+PLQSF +DLGDRARIEHLRI+ G+LS+GGRFILTNTPGFTVA    KRG IN+DLAESLSR+VSN L LRRE
Sbjct:    3 VSVLLHDEPISFGGRRPFTSHAARWFIKRRILSTAKASAALNVEVEARNNRDAMRGRWESISIDFAKTIFEDIQVSGGA-FELLGVDVLTLGLLPGPWRRLRRLRRPCEAIGRSTFTDVDVAYSPAIRRLAQRVVNHALRPRAKRA------AVAXXXXXXXXXXXXXXXXXXXXLPXXXXXXXXXXXXXXXXXSEQQQGGLEPSVSVLGVRVHGNKLAIEGEMTNGGTFLRVPFRYHFSLSASADGHVLYFKGSSVYWGTPGGHVPLPMMPLQSFKIDLGDRARIEHLRISRGVLSLGGRFILTNTPGFTVALPGLKRGDINYDLAESLSRLVSNCLNLRRE 338          
BLAST of mRNA_H-canaliculatus_F_contig1281.2343.1 vs. uniprot
Match: A0A6H5K8F0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8F0_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 3.610e-37
Identity = 93/304 (30.59%), Postives = 154/304 (50.66%), Query Frame = 1
Query:  334 PFTSHAARWLIKRCIHRKAVASAALNVEVEARSNRAAMTGRWESISVDFQEMIFDDIQVTGGARFELLGVDLLTLGLLPGPWRRLRRLRRPCEVTGTSRFTDVDVAYSPAIRRLAQRVVNHALRPRAKKADGGGGRAAAGAIGTGFNTNGGGSRWGEGEQQHEVEP----RVNVLRVRVRGNKLAIEGEMTNGGTFLRVPFRYEFSLSASRDGHILHFKGSNIYWGTPGGHVPLPMLPLQSFNVDLGDRARIEHLRIAGGILSVGGRFILTNTPGFTVAHQRFKRGSINFDLAESLSRVVSNIL 1233
            P  S    W+++R I  +A+    L V V+ARSNR AM+G  +S+ + F  +  +++Q++GGAR  +  +DL  + LL   W+R    ++P E+ G+   T  D++ S  +RRL   ++N  LR     A                                  EP     + + +V  + ++L IEGEM       +VPF Y  S+     GH+++ K + ++W   GG + LP+LPL++F+VD+G+ ARIE +RI  G +++  R +++  P   VA  R KR +  FD+AE LS    N++
Sbjct:  496 PLWSKILVWVLERAITNRAMLVEGLEVSVDARSNREAMSGLLQSVGITFNHLELENLQISGGARMNITNLDLKVMTLL---WKRFGSFKKPFEIEGSYVLTSEDLSTSSIVRRLVTNMMNSTLRKLETLA---------------------------------TEPLRKSSITITQVSAKRSRLVIEGEMAYDSA--KVPFTYRTSIGVKGKGHVVYLKDAEVFWENIGGSLSLPLLPLETFDVDMGEGARIESIRIVNGQVALKARVVISPFPPLLVASVR-KRAAFRFDVAERLSVTFGNLV 760          
BLAST of mRNA_H-canaliculatus_F_contig1281.2343.1 vs. uniprot
Match: D7G8F0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8F0_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 2.110e-26
Identity = 74/253 (29.25%), Postives = 125/253 (49.41%), Query Frame = 1
Query:  487 MIFDDIQVTGGARFELLGVDLLTLGLLPGPWRRLRRLRRPCEVTGTSRFTDVDVAYSPAIRRLAQRVVNHALRPRAKKADGGGGRAAAGAIGTGFNTNGGGSRWGEGEQQHEVEP----RVNVLRVRVRGNKLAIEGEMTNGGTFLRVPFRYEFSLSASRDGHILHFKGSNIYWGTPGGHVPLPMLPLQSFNVDLGDRARIEHLRIAGGILSVGGRFILTNTPGFTVAHQRFKRGSINFDLAESLSRVVSNIL 1233
            M+ + ++++GGAR  +  +DL  + LL   W+R    ++P E+ G+   T  D++ S  +RRL   ++N  LR     A                                  EP     + + +V  + ++L IEGEM       +VPF Y  S+     GH+++ K + ++W   GG + LP+LPL++F+VD+G+ ARIE +RI  G +++  R +++  P   VA  R KR +  FD+AE LS    N++
Sbjct:  288 MLVEGLEISGGARMNITNLDLKVMTLL---WKRFGSFKKPFEIEGSYVLTSEDLSTSSMVRRLVTNMMNSTLRKLETLA---------------------------------TEPLRKSSITITQVLAKRSRLVIEGEMAYDSA--KVPFTYRTSIGVKGKGHVVYLKDAEVFWENVGGSLSLPLLPLETFDVDMGEGARIESIRIVNGQVALKARVVISPFPPLLVASLR-KRAAFRFDVAERLSVTFGNLV 501          
BLAST of mRNA_H-canaliculatus_F_contig1281.2343.1 vs. uniprot
Match: A0A7S2V2K7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2K7_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 4.430e-19
Identity = 83/296 (28.04%), Postives = 137/296 (46.28%), Query Frame = 1
Query:  328 RRPFTSHAARWLIKRCIHRKAVASAALNVEVEARSNRAAMTGRWESISVDFQEMIFDDIQVTGGARFELLGVDLLTLGLLPGPWRRLRRLRRPCEVTGTSRFTDVDVAYSPAIRRLAQRVVNHALRPRAKKADGGGGRAAAGAIGTGFNTNGGGSRWGEGEQQHEVEPRVNVLRVRVRGNKLAIEGEMTNGGTFLRVPFRYEFSLSASRDGHILHFKGSNIYWGTPGG-HVPLPMLPLQSFNVDLGDRARIEHLRIAGGILSVGGRFILTNTPGFTVAHQRFKRGSINFDLAESLS 1212
            RRPF +  A W+ KR I  ++   + L+V V + SN   ++G  +SI V F ++ F+  QVTGG   ++LG++L  L      W  LR+L++P E+      T  D+  SPA+R +AQ ++N  L            RA   ++ +                       V V +V +  N++A  G + N      +PF     L    +GH++      +         + +P+  L   ++DLG+ A+IE L I    + VG R +++  P F VA Q  KR + ++DL + LS
Sbjct:  126 RRPFCAKFANWIGKRIIKSRSRYVSKLSVSVASDSNIQVLSGNLKSIEVSFDQLFFEKWQVTGGGYLQILGLNL-KLTAFVFTW--LRKLKKPFELYSEVVLTQSDLINSPALRDVAQVILNGVLS-----------RALDRSLLS-----------------------VKVRKVSIVDNRIAFYG-IANSAVTGSIPFTVWTGLQLKDNGHVISLDQLEVSTNPNTWLEMTVPVYSLGPIDIDLGENAKIERLTIENRKVLVGARAVISTVPPFQVA-QVEKRATYHYDLGKFLS 382          
BLAST of mRNA_H-canaliculatus_F_contig1281.2343.1 vs. uniprot
Match: A0A4D9D3X5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3X5_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 3.640e-18
Identity = 84/300 (28.00%), Postives = 136/300 (45.33%), Query Frame = 1
Query:  328 RRPFTSHAARWLIKRCIHRKAVASAALNVEVEARSNRAAMTGRWESISVDFQEMIFDDIQVTGGARFELLGVDLLTLGLLPGPWRRLRRLRRPCEVTGTSRFTDVDVAYSPAIRRLAQRVVNHALRPRAKKADGGGGRAAAGAIGTGFNTNGGGSRWGEGEQQHEVEPRVNVLRVRVRGN-KLAIEGEMTNGGTFLRVPFRYEFSLSASRDGHILHFKGSNIYWGTPGGHVPL--PMLPLQSFNVDLGDRARIEHLRI--AGGILSVGGRFILTNTPGFTVAHQRFKRGSINFDLAESLS 1212
            R+P  S     L  + + + A     L+V+V ARSN   + G    +   F  ++ +++Q++GG R E+ G+++  L LL    RRL  +R+P EV G    T  DV+ S  IR + Q +VN+ LR                   T F +             H     V++  VR+    KLA+ G      +   +PF     +  + DGHI++     +    P   +P+  P+  +++F+VD+GD ARIE L I  A G+ +V  R ++T  P F V     KR +  +D+    S
Sbjct:    4 RKPILSTVVEVLASKLVRKTARRVTGLDVDVGARSNSDVLAGNLPLVKAKFSRIVLENLQISGGGRMEITGLNIRLLALLLA--RRLSLIRKPFEVCGEYVLTQQDVSASKLIRDMVQLLVNNVLR-------------------TLFPS------------LHLTFFDVSIDSVRISPRRKLAVHGTANVAESASGMPFTLLTGVGLAGDGHIVYLDDPELVLN-PKAPLPVKVPLGSIRAFDVDIGDNARIERLEIDEARGV-TVTARTLITPAPPFQVTDVG-KRAAFLYDMGAFFS 267          
BLAST of mRNA_H-canaliculatus_F_contig1281.2343.1 vs. uniprot
Match: W7TXL0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXL0_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 7.330e-18
Identity = 85/304 (27.96%), Postives = 137/304 (45.07%), Query Frame = 1
Query:  316 SFGGRRPFTSHAARWLIKRCIHRKAVASAALNVEVEARSNRAAMTGRWESISVDFQEMIFDDIQVTGGARFELLGVDLLTLGLLPGPWRRLRRLRRPCEVTGTSRFTDVDVAYSPAIRRLAQRVVNHALRPRAKKADGGGGRAAAGAIGTGFNTNGGGSRWGEGEQQHEVEPRVNVLRVRVRGN-KLAIEGEMTNGGTFLRVPFRYEFSLSASRDGHILHFKGSNIYWGTPGGHVPL--PMLPLQSFNVDLGDRARIEHLRI--AGGILSVGGRFILTNTPGFTVAHQRFKRGSINFDLAESLS 1212
            S   R+P  S     L  + + + A     L+V+V ARSN   + G    +   F  ++ +++Q++GG R E+ G+++  L LL    RRL  +R+P EV G    T  DV+ S  IR + Q +VN+ LR                   T F +             H     V++  VR+    KLA+ G      +   +PF     +  + DGHI++     +    P   +P+  P+  +++F+VD+GD ARIE L I  A G+ +V  R ++T  P F V     KR +  +D+    S
Sbjct:   91 SMSERKPILSTVVEVLASKLVRKTARRVTGLDVDVGARSNSDVLAGNLPLVKAKFSRIVLENLQISGGGRMEITGLNIRLLALLLA--RRLSLIRKPFEVCGEYVLTQQDVSASKLIRDMVQLLVNNVLR-------------------TLFPS------------LHLTFFDVSIDSVRISPRRKLAVHGTANVAESASGMPFTLLTGVGLAGDGHIVYLDDPELVLN-PEAPLPVKVPLGSIRAFDVDIGDNARIERLEIDEARGV-TVTARTLITPAPPFQVTDVG-KRAAFLYDMGAFFS 358          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1281.2343.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5K9J0_9PHAE1.490e-16161.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB91_ECTSI2.480e-15270.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K8F0_9PHAE3.610e-3730.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8F0_ECTSI2.110e-2629.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2V2K7_9STRA4.430e-1928.04Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9D3X5_9STRA3.640e-1828.00Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TXL0_9STRA7.330e-1827.96Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1281contigH-canaliculatus_F_contig1281:17518..20620 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-27_004760.1
Exons5
Model size1519
Cds size1041
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929004.014026-UTR-H-canaliculatus_F_contig1281:17517..177851622929004.014026-UTR-H-canaliculatus_F_contig1281:17517..17785Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1281 17518..17785 -
1696845646.479345-UTR-H-canaliculatus_F_contig1281:17517..177851696845646.479345-UTR-H-canaliculatus_F_contig1281:17517..17785Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1281 17518..17785 -
1622929004.104351-UTR-H-canaliculatus_F_contig1281:20410..206201622929004.104351-UTR-H-canaliculatus_F_contig1281:20410..20620Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1281 20411..20620 -
1696845646.5444908-UTR-H-canaliculatus_F_contig1281:20410..206201696845646.5444908-UTR-H-canaliculatus_F_contig1281:20410..20620Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1281 20411..20620 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929004.0296016-CDS-H-canaliculatus_F_contig1281:17785..179691622929004.0296016-CDS-H-canaliculatus_F_contig1281:17785..17969Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1281 17786..17969 -
1696845646.489786-CDS-H-canaliculatus_F_contig1281:17785..179691696845646.489786-CDS-H-canaliculatus_F_contig1281:17785..17969Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1281 17786..17969 -
1622929004.043916-CDS-H-canaliculatus_F_contig1281:18537..190971622929004.043916-CDS-H-canaliculatus_F_contig1281:18537..19097Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1281 18538..19097 -
1696845646.50044-CDS-H-canaliculatus_F_contig1281:18537..190971696845646.50044-CDS-H-canaliculatus_F_contig1281:18537..19097Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1281 18538..19097 -
1622929004.0615518-CDS-H-canaliculatus_F_contig1281:19772..199671622929004.0615518-CDS-H-canaliculatus_F_contig1281:19772..19967Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1281 19773..19967 -
1696845646.5107586-CDS-H-canaliculatus_F_contig1281:19772..199671696845646.5107586-CDS-H-canaliculatus_F_contig1281:19772..19967Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1281 19773..19967 -
1622929004.0801866-CDS-H-canaliculatus_F_contig1281:20257..203011622929004.0801866-CDS-H-canaliculatus_F_contig1281:20257..20301Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1281 20258..20301 -
1696845646.5212302-CDS-H-canaliculatus_F_contig1281:20257..203011696845646.5212302-CDS-H-canaliculatus_F_contig1281:20257..20301Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1281 20258..20301 -
1622929004.0917363-CDS-H-canaliculatus_F_contig1281:20352..204101622929004.0917363-CDS-H-canaliculatus_F_contig1281:20352..20410Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1281 20353..20410 -
1696845646.5333533-CDS-H-canaliculatus_F_contig1281:20352..204101696845646.5333533-CDS-H-canaliculatus_F_contig1281:20352..20410Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1281 20353..20410 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1281.2343.1prot_H-canaliculatus_F_contig1281.2343.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1281 17786..20410 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1281.2343.1

>prot_H-canaliculatus_F_contig1281.2343.1 ID=prot_H-canaliculatus_F_contig1281.2343.1|Name=mRNA_H-canaliculatus_F_contig1281.2343.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=347bp
MAQTSGRSVVRGSPTRKEGALMAASMSVLLHDEPTSFGGRRPFTSHAARW
LIKRCIHRKAVASAALNVEVEARSNRAAMTGRWESISVDFQEMIFDDIQV
TGGARFELLGVDLLTLGLLPGPWRRLRRLRRPCEVTGTSRFTDVDVAYSP
AIRRLAQRVVNHALRPRAKKADGGGGRAAAGAIGTGFNTNGGGSRWGEGE
QQHEVEPRVNVLRVRVRGNKLAIEGEMTNGGTFLRVPFRYEFSLSASRDG
HILHFKGSNIYWGTPGGHVPLPMLPLQSFNVDLGDRARIEHLRIAGGILS
VGGRFILTNTPGFTVAHQRFKRGSINFDLAESLSRVVSNILRLRRE*
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mRNA from alignment at H-canaliculatus_F_contig1281:17518..20620-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1281.2343.1 ID=mRNA_H-canaliculatus_F_contig1281.2343.1|Name=mRNA_H-canaliculatus_F_contig1281.2343.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3103bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1281:17518..20620- (Hapterophycus canaliculatus Oshoro5f female)
CTCTCCAGACGAGCAGCGCGGGCGCTGGGGCTTGGGACCGCCACCCTTCT GGTCCTGACTGGAGCGACTCTCCCCCATCCGCACCCGGAGGTGTTGGTGA AGCAAAGCTGCCCGGCATTCTGCAACGGGATTCCTGCGGCTTTGGGATGT ACGAGAGGTCTCCCGCGGCTCGTATCGGCGCCCGGGCGGGCGAGGCCCGC CACCACAACGATGGCGCAGACCTCCGGGAGGTCGGTGGTGCGGGGTTCGC CTACAAGGAAAGAGGGCGGTTGGAGCTCGCAGGGGGGCGCTCCCGCGCAG GGGAAGGCGAACGGGGGAGCCCTCATGGCTGCGAGTATGTCGGTCTTGCT GCATGATGAACCGGTGAGAGAGCGCTGGACAGGGGGAGGTTTGGGTCGCC TCTAAAAGATTTGGGAGAGGGGACGGTTGATCGACCGCTGCGATTTCCCG CGACCGCACCAGCACTGCAGTGCCCGCTGGCCTGATTCGTGGAGATCGCC GTTCGTGTTTGCGCTGTTGACCGGACCAGGTTCACGCACTTATTTTCCCG CGTTTTTGTATCGTCTCTGTCGATCATTTGACCCTTGTCTCCGAATCCTC CTTTTCCTTTCTCTGTCCCCGCGCGCGCATACGACTCCTACGTAACATGA AAGACCTCGTTCGGCGGCCGCCGGCCGTTTACCAGCCATGCGGCCCGGTG GCTCATCAAGCGTTGCATCCATCGAAAAGCTGTCGCCAGCGCAGCACTCA ACGTCGAAGTGGAGGCGAGATCCAATCGAGCCGCGATGACGGGGAGGTGG GAGAGCATCAGCGTCGACTTTCAAGAAATGATCTTTGACGACATCCAGGT GCGTCCATCATCACACACATCGACGAAGTTCGGGCACCCTTTACACCACC GCAGTTCAGCGTGCCGAGTTCTAGGGGAATTTTAGGGGAGGCATCTGGGT GTACGTATGAACGTGCGTGGTCCCAGGGAGGCCCGCTTATGGAGGGTGGC TGCTGTCACGCGATGTATGTGTCGCGCGTTGCATGTCAAACAAAGTTGAC TCCTGCAGCTGACCGAATTGAGTCTGGCATGCCCATCCGTGCTGTGGTCC TTCTGCGCGGAGGCACATTTTTGGAAAGTCAACAACAGCAAATGAACGCC CTCCTCTGAGACAAATTATGACGACAGGGCGACTAGTGTGTTGAATTCCT CACACTGAAGTTTCAGTACGGTCGACGGAACAAAGATACGGTAGGTGCAG AAGGTTGCAAGGTTCTTGTCTTGCGAGATCTGGTGAGATAACGGCGACCA AAGTTCAGGTACTGTACTCGTATATTTCACCGTTTTTATTGCACGCATAT TGCGGTGGGTGCCTTCATCCAAAGGGAAGCATGCAGGGTCCGCGCGAGTG AAACAGAAAAAACAAACCTTATTTTCGAGGCAGATGAGACGGTGGGTGGG CGGTACACAAAAGGCGTACTGGGCTAACTTCGGCGTGCGATGCCAATTGC GGATTCTCTTTGTGTCCCGAAAGGTTACCGGCGGTGCGAGGTTCGAGCTC CTCGGCGTCGACCTTCTGACTCTCGGGCTGCTGCCGGGCCCCTGGCGCCG ACTCCGCCGCCTCAGGCGACCCTGCGAAGTCACCGGTACCTCGAGATTCA CCGACGTTGACGTGGCGTACTCCCCCGCTATCCGCCGCCTCGCGCAGCGC GTGGTCAACCACGCGCTCAGGCCGCGCGCAAAGAAGGCGGACGGTGGTGG CGGCAGGGCGGCGGCCGGTGCTATCGGCACCGGTTTCAACACGAACGGCG GCGGCAGCCGCTGGGGAGAAGGCGAGCAGCAGCACGAGGTAGAGCCGCGG GTGAACGTGCTGAGGGTGCGAGTGCGCGGGAACAAGCTCGCGATCGAAGG AGAGATGACCAATGGGGGAACGTTCCTGCGCGTCCCCTTCCGGTACGAGT TTTCGCTGAGCGCGTCTCGGGACGGACACATCCTGCACTTCAAGGGCTCT AATATCTACTGGGGGACGCCCGGAGGCCACGTGCCCCTACCCATGTTGCC GTTGCAGTCCTTCAACGTCGACCTGGGCGATAGGTGTGTGAGCGCGCGGG GTTGGGTTTGTCGGCCTCCCTTGCTGCAGCTGGTGATGTGACCGGAGAGC GATAGAATTTGGGTTATGAGACAGCCGTGGCGAGGCATAGACCAACCCGG GGGTTGTTTTTTTTTGTTTTCTGGGCACTCGAAAATACTACGCGGATTGG GCGGCCAGTCGCACGCTGCGCATCCGCCGGACGTCGGACTCGTGCGTTCG ACGCGATGCTGTGCGAATCGATTCGTGCGAAGTTCTTTTTTTCTTCGCAG GTACCTGTTGACGAAAAGAACGTGGGCACAGGGTCGCTGTTGACGCATTC GTTCCCGCGCGCGAAGTGCTCTGTTGCGGGTCGCGGTTGATCGATCTACC CAACCGGTGCTTCGGAACAGTCTGGAGTGCGTTCGCATCGAAAACTTGGA AGTGTCTACCAAATCCCGATTCCTTCCGCACCACCTGCCACGACATCCAC TTTTTTCACACGCACCGAACTCTCTTCCTGCTTCACGCTTCACACGCGCG GTCACGCCTAATCCTGTTGAACCTGGTGTGTGCTCGTCTTACTTTTGGCA GGGCGAGGATTGAGCACTTGAGAATCGCCGGGGGGATCCTCTCGGTCGGT GGAAGGTTCATCCTCACCAACACCCCCGGTTTCACCGTCGCGCACCAGCG CTTCAAGAGGGGCAGCATCAATTTCGACCTGGCGGAGAGCCTGAGTCGTG TTGTCAGTAACATCTTACGCCTGCGGAGGGAGTGACGAGTCCCTCTTTCT CGCTCTCCCCTCGTTCAGCGCCGACAGGGGGCCGAAAAAGCAATAATAAA AAAAACGCGTAGGAATGAGTGTCCCGTGTTCGTCTAGCCGCCGCGCTGGT AGGGTTCAACTCCGCGCTGTAGGCCGCCTCCGGGGCGGGAATATGCGGAA TGGCTCGCATGCCTCGTGTCCGCGACGCTGCTGTCCCTGTTGCGACGTAC AAGCTTGCATGCGGTGAGAAGTAGCGCTGCTTCCCCTGCTGGTTTCCACG TGA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1281:17518..20620-

>mRNA_H-canaliculatus_F_contig1281.2343.1 ID=mRNA_H-canaliculatus_F_contig1281.2343.1|Name=mRNA_H-canaliculatus_F_contig1281.2343.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2082bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1281:17518..20620- (Hapterophycus canaliculatus Oshoro5f female)
ATGGCGCAGACCTCCGGGAGGTCGGTGGTGCGGGGTTCGCCTACAAGGAA
AGAGGGCGATGGCGCAGACCTCCGGGAGGTCGGTGGTGCGGGGTTCGCCT
ACAAGGAAAGAGGGCGCCCTCATGGCTGCGAGTATGTCGGTCTTGCTGCA
TGATGAACCGCCCTCATGGCTGCGAGTATGTCGGTCTTGCTGCATGATGA
ACCGACCTCGTTCGGCGGCCGCCGGCCGTTTACCAGCCATGCGGCCCGGT
GGCTCATCAAGCGTTGCATCCATCGAAAAGCTGTCGCCAGCGCAGCACTC
AACGTCGAAGTGGAGGCGAGATCCAATCGAGCCGCGATGACGGGGAGGTG
GGAGAGCATCAGCGTCGACTTTCAAGAAATGATCTTTGACGACATCCAGA
CCTCGTTCGGCGGCCGCCGGCCGTTTACCAGCCATGCGGCCCGGTGGCTC
ATCAAGCGTTGCATCCATCGAAAAGCTGTCGCCAGCGCAGCACTCAACGT
CGAAGTGGAGGCGAGATCCAATCGAGCCGCGATGACGGGGAGGTGGGAGA
GCATCAGCGTCGACTTTCAAGAAATGATCTTTGACGACATCCAGGTTACC
GGCGGTGCGAGGTTCGAGCTCCTCGGCGTCGACCTTCTGACTCTCGGGCT
GCTGCCGGGCCCCTGGCGCCGACTCCGCCGCCTCAGGCGACCCTGCGAAG
TCACCGGTACCTCGAGATTCACCGACGTTGACGTGGCGTACTCCCCCGCT
ATCCGCCGCCTCGCGCAGCGCGTGGTCAACCACGCGCTCAGGCCGCGCGC
AAAGAAGGCGGACGGTGGTGGCGGCAGGGCGGCGGCCGGTGCTATCGGCA
CCGGTTTCAACACGAACGGCGGCGGCAGCCGCTGGGGAGAAGGCGAGCAG
CAGCACGAGGTAGAGCCGCGGGTGAACGTGCTGAGGGTGCGAGTGCGCGG
GAACAAGCTCGCGATCGAAGGAGAGATGACCAATGGGGGAACGTTCCTGC
GCGTCCCCTTCCGGTACGAGTTTTCGCTGAGCGCGTCTCGGGACGGACAC
ATCCTGCACTTCAAGGGCTCTAATATCTACTGGGGGACGCCCGGAGGCCA
CGTGCCCCTACCCATGTTGCCGTTGCAGTCCTTCAACGTCGACCTGGGCG
ATAGGTTACCGGCGGTGCGAGGTTCGAGCTCCTCGGCGTCGACCTTCTGA
CTCTCGGGCTGCTGCCGGGCCCCTGGCGCCGACTCCGCCGCCTCAGGCGA
CCCTGCGAAGTCACCGGTACCTCGAGATTCACCGACGTTGACGTGGCGTA
CTCCCCCGCTATCCGCCGCCTCGCGCAGCGCGTGGTCAACCACGCGCTCA
GGCCGCGCGCAAAGAAGGCGGACGGTGGTGGCGGCAGGGCGGCGGCCGGT
GCTATCGGCACCGGTTTCAACACGAACGGCGGCGGCAGCCGCTGGGGAGA
AGGCGAGCAGCAGCACGAGGTAGAGCCGCGGGTGAACGTGCTGAGGGTGC
GAGTGCGCGGGAACAAGCTCGCGATCGAAGGAGAGATGACCAATGGGGGA
ACGTTCCTGCGCGTCCCCTTCCGGTACGAGTTTTCGCTGAGCGCGTCTCG
GGACGGACACATCCTGCACTTCAAGGGCTCTAATATCTACTGGGGGACGC
CCGGAGGCCACGTGCCCCTACCCATGTTGCCGTTGCAGTCCTTCAACGTC
GACCTGGGCGATAGGGCGAGGATTGAGCACTTGAGAATCGCCGGGGGGAT
CCTCTCGGTCGGTGGAAGGTTCATCCTCACCAACACCCCCGGTTTCACCG
TCGCGCACCAGCGCTTCAAGAGGGGCAGCATCAATTTCGACCTGGCGGAG
AGCCTGAGTCGTGTTGTCAGTAACATCTTACGCCTGCGGAGGGAGTGAGG
CGAGGATTGAGCACTTGAGAATCGCCGGGGGGATCCTCTCGGTCGGTGGA
AGGTTCATCCTCACCAACACCCCCGGTTTCACCGTCGCGCACCAGCGCTT
CAAGAGGGGCAGCATCAATTTCGACCTGGCGGAGAGCCTGAGTCGTGTTG
TCAGTAACATCTTACGCCTGCGGAGGGAGTGA
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