mRNA_H-canaliculatus_F_contig12802.2335.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12802.2335.1 vs. uniprot
Match: D7G521_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G521_ECTSI) HSP 1 Score: 323 bits (827), Expect = 3.260e-108 Identity = 154/167 (92.22%), Postives = 162/167 (97.01%), Query Frame = 1
Query: 1 RAKKAEMASSFLEWTSEPIHKSLTDVSGLKGEAKKQFKNLLGYCGDRKYQYPDPLIRDIVAKGVEMEQLRGELYVHAMKQLTKNPNPASVQRCWEMVTMLLTCFPPPKDLENYVHYFVRCNAPSDTREKFKLAVHMSVYDGVKTTAPSVKDIPPLLSGFFEREISAR 501
RAKKAE+ASSFLEWTS+PIHKSLTDVSGLKGEAKKQFKN+LGYCGDRKYQYPDPLIRDIVAKG+EM +LRGELYV AMKQLTKN NPASVQRCWE+VTMLLTCFPPPKD+ENYVHYFVRCNAP DTREKFKLAVHMSVYDGVK TAPSVK+IPPLLSGFFEREISAR
Sbjct: 40 RAKKAELASSFLEWTSDPIHKSLTDVSGLKGEAKKQFKNMLGYCGDRKYQYPDPLIRDIVAKGLEMTELRGELYVQAMKQLTKNANPASVQRCWEVVTMLLTCFPPPKDMENYVHYFVRCNAPEDTREKFKLAVHMSVYDGVKETAPSVKEIPPLLSGFFEREISAR 206
BLAST of mRNA_H-canaliculatus_F_contig12802.2335.1 vs. uniprot
Match: A0A6H5KSK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSK5_9PHAE) HSP 1 Score: 317 bits (813), Expect = 6.950e-98 Identity = 152/167 (91.02%), Postives = 161/167 (96.41%), Query Frame = 1
Query: 1 RAKKAEMASSFLEWTSEPIHKSLTDVSGLKGEAKKQFKNLLGYCGDRKYQYPDPLIRDIVAKGVEMEQLRGELYVHAMKQLTKNPNPASVQRCWEMVTMLLTCFPPPKDLENYVHYFVRCNAPSDTREKFKLAVHMSVYDGVKTTAPSVKDIPPLLSGFFEREISAR 501
+AKKAE+ASSFLEWTS+PIHKSLTDVSGLKGEAKKQFKN+LGYCGDRKYQYPDPLIRDIVAKG+EM +LRGELYV AMKQLTKN NPASVQR WE+VTMLLTCFPPPKD+ENYVHYFVRCNAP DTREKFKLAVHMSVYDGVK TAPSVK+IPPLLSGFFEREISAR
Sbjct: 1033 KAKKAELASSFLEWTSDPIHKSLTDVSGLKGEAKKQFKNMLGYCGDRKYQYPDPLIRDIVAKGLEMTELRGELYVQAMKQLTKNANPASVQRYWEVVTMLLTCFPPPKDMENYVHYFVRCNAPEDTREKFKLAVHMSVYDGVKETAPSVKEIPPLLSGFFEREISAR 1199
BLAST of mRNA_H-canaliculatus_F_contig12802.2335.1 vs. uniprot
Match: A0A836C908_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C908_9STRA) HSP 1 Score: 224 bits (572), Expect = 6.590e-65 Identity = 108/164 (65.85%), Postives = 127/164 (77.44%), Query Frame = 1
Query: 10 KAEMASSFLEWTSEPIHKSLTDVSGLKGEAKKQFKNLLGYCGDRKYQYPDPLIRDIVAKGVEMEQLRGELYVHAMKQLTKNPNPASVQRCWEMVTMLLTCFPPPKDLENYVHYFVRCNAPSDTREKFKLAVHMSVYDGVKTTAPSVKDIPPLLSGFFEREISAR 501
KA++A FL T+EPIHKSL VSGLKGEA KQFKNLLGY GDRKYQYPDPL+ +IVAKG+E+ LR ELYV AMKQLT NPNP S QRCWE++ +LL FPPP+D+ENYVH FVR AP+ R+K KLAVHMSV +G K AP ++IP +L FF+R I R
Sbjct: 1148 KADLARGFLSHTTEPIHKSLLRVSGLKGEALKQFKNLLGYAGDRKYQYPDPLLHEIVAKGLEVPTLRSELYVQAMKQLTDNPNPQSEQRCWEVLMLLLHTFPPPEDVENYVHAFVRARAPAGQRDKLKLAVHMSVVEGAKAAAPPEREIPAILGAFFDRAIEPR 1311
BLAST of mRNA_H-canaliculatus_F_contig12802.2335.1 vs. uniprot
Match: A0A7S1U0W2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0W2_9STRA) HSP 1 Score: 135 bits (340), Expect = 1.030e-33 Identity = 66/167 (39.52%), Postives = 105/167 (62.87%), Query Frame = 1
Query: 10 KAEMASSFLEWTSEPIHKSLTDVSGLKGE--AKKQFKNLLGYCGDRKYQYPDPLIRDIVAKGVE-MEQLRGELYVHAMKQLTKNPNPASVQRCWEMVTMLLTCFPPPKDLENYVHYFVRCNAPSDTREKFKLAVHMSVYDGVKTTAPSVKDIPPLLSGFFEREISAR 501
K ++A+ L T++PIH LTD+ A +QF++L+ Y GDR Y YPD LI + + G+ +LR E Y+ MKQL NP+ S ++ WE++ +L+ FPPP+ +EN+V F+R AP ++KF +A+H S Y G ++ S+ + P +LS F+E+E+SA+
Sbjct: 732 KKDVAAGMLNHTAKPIHACLTDLEAEDERKLATRQFRSLMAYMGDRAYSYPDQLIAEYLELGLRGKSELRAEFYIQVMKQLRNNPSTESAKKGWEVMIFMLSSFPPPESVENFVALFLRQMAPEGQKDKFSIALHASTYGGGRSAPISLPEFPQILSKFYEQEMSAK 898
BLAST of mRNA_H-canaliculatus_F_contig12802.2335.1 vs. uniprot
Match: A0A7S2WRB6_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WRB6_9STRA) HSP 1 Score: 119 bits (298), Expect = 4.680e-28 Identity = 60/157 (38.22%), Postives = 95/157 (60.51%), Query Frame = 1
Query: 7 KKAEMASSFLEWTSEPIHKSLTDVSG-LKGEAKKQFKNLLGYCGDRKYQYPDPLIRDIVAKGVEM-EQLRGELYVHAMKQLTKNPNPASVQRCWEMVTMLLTCFPPPKDLENYVHYFVRCNAPSDTREKFKLAVHMSVYDGVKTTAPSVKDIPPLLS 471
K+ E+A + L+W I SLT + L A + K +LG+CGD+ P+ L ++IV+ G++ E+LR E+Y +K LT+NP+P S+ + W++ + + FPP DL NY+H F+R NAP ++ +K ++ YDG K AP+V IP L+S
Sbjct: 1217 KREELARNMLKWQKGGIKTSLTQMDPTLAKNAVRIHKAILGWCGDKTNPSPNSLAQEIVSSGIQQSEKLRDEIYCQILKHLTENPDPQSLSQAWKLFALCIQYFPPSTDLGNYLHIFIRNNAPPHLKDSYKQYLYSIEYDGAKPVAPAVDQIPSLVS 1373
BLAST of mRNA_H-canaliculatus_F_contig12802.2335.1 vs. uniprot
Match: A0A7S3YT57_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YT57_9EUKA) HSP 1 Score: 111 bits (278), Expect = 2.310e-25 Identity = 51/155 (32.90%), Postives = 92/155 (59.35%), Query Frame = 1
Query: 16 EMASSFLEWTSEPIHKSLTDVSGLKG-EAKKQFKNLLGYCGDRKYQYPDPLIRDIVAKGVEMEQLRGELYVHAMKQLTKNPNPASVQRCWEMVTMLLTCFPPPKDLENYVHYFVRCNAPSDT-REKFKLAVHMSVYDGVKTTAPSVKDIPPLLSG 474
E+ + WT PIH SL ++ G G +A + F+NLLG+ GDR+Y +P+ L+++I+ +G++ LR EL+ +KQ+T+NP+ S + W + + L FPP + ENY ++R N + R ++ +H +++ G + PS D+ +++G
Sbjct: 1198 ELQRTMFRWTKSPIHASLIELPGRLGKDATRMFRNLLGFMGDRQYNFPELLLKEILEQGIQNPPLRDELFAQIIKQITQNPDNQSSHKGWSAMAVCLESFPPQPEFENYFEVWIRKNIKDEAKRTRYLTLLHQAIFCGARQFPPSEGDMKRIMAG 1352
BLAST of mRNA_H-canaliculatus_F_contig12802.2335.1 vs. uniprot
Match: A0A7S4IN46_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IN46_9EUKA) HSP 1 Score: 110 bits (274), Expect = 7.860e-25 Identity = 52/150 (34.67%), Postives = 89/150 (59.33%), Query Frame = 1
Query: 10 KAEMASSFLEWTSEPIHKSLTDVSGL-KGEAKKQFKNLLGYCGDRKYQYPDPLIRDIVAKGVEMEQLRGELYVHAMKQLTKNPNPASVQRCWEMVTMLLTCFPPPKDLENYVHYFVRCNAPSDTREKFKLAVHMSVYDGVKTTAPSVKDI 456
K ++ + W+ PIH LT + L + ++ FKN++G+ GDR +P+ L R+++ KG++ +LR E+Y+ +KQ+T NPNP+S ++ ++M+ M L CFPP + ENY+ + R S + + K A+H V+ G PS + I
Sbjct: 1275 KDKVKEQMMNWSKHPIHAPLTRIPNLFQKDSVLSFKNIMGFMGDRVMSFPNMLAREVLEKGIQQPELRDEIYIQLIKQVTVNPNPSSTEKGYKMMNMCLHCFPPSTEFENYLEIYFRNKGDSKSNDLRK-ALHQIVWSGPVAVPPSPEQI 1423
BLAST of mRNA_H-canaliculatus_F_contig12802.2335.1 vs. uniprot
Match: A0A7S3LM69_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LM69_9STRA) HSP 1 Score: 102 bits (254), Expect = 3.600e-22 Identity = 62/180 (34.44%), Postives = 90/180 (50.00%), Query Frame = 1
Query: 7 KKAEMASSFLEWTSEPIHKSLTDVSG--LKGEAKKQFKNLLGYCGDRKYQYPDPLIRDIVAKGVEME---------------------QLRGELYVHAMKQLTKNPNPASVQRCWEMVTMLLTCFPPPKDLENYVHYFVRCNAPSDTREKFKLAVHMSVYDGVKTTAPSVKDIPPLLSGF 477
K+ E A++ L WT I SL D G A K K +LG+CGD+ +P+ L R+IVA + + +R E++ MK T NP+ SV + W++ + + F +DL NYVH F+R NAPS ++K A++ Y+G KT PSV IP L+S F
Sbjct: 669 KREEFATNMLCWTKYTILASLLDAEGPYFSKTAIKLHKAILGFCGDKNNPHPNSLAREIVATALTISADTGSSNQRGSIRYGSTNIGIDVRDEIFCLLMKHTTANPSAHSVSQAWKLFGLCIQFFSAGEDLSNYVHIFIRRNAPSHLKQKLIDAMYTREYEGSKTVPPSVDQIPLLISNF 848
BLAST of mRNA_H-canaliculatus_F_contig12802.2335.1 vs. uniprot
Match: A0A6B2KWF1_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KWF1_9EUKA) HSP 1 Score: 101 bits (251), Expect = 9.590e-22 Identity = 57/155 (36.77%), Postives = 91/155 (58.71%), Query Frame = 1
Query: 10 KAEMASSFLEWTSEPIHKSLTDVSG--LKGEAKKQFKNLLGYCGDRKYQYPDPLIRDIVAKGVEMEQLRGELYVHAMKQLTKNPNPASVQRCWEMVTMLLTCFPPPKDLENYVHYFVRCNAPSDTREKFKLAVHMSVYDGVKTTAPSVKDIPPLL 468
K ++ +S L+W+ E I SLT + L EA + FKN++G+ GD++ QYP + R++V KG ++ LR E+YV +KQLT NPN S Q+ W+++ + L FPP E+Y+ F+R N + R +H + +GV+ PS + I L+
Sbjct: 1163 KDKVKNSMLQWSKETIPTSLTTIEDKLLLKEAVRNFKNIMGWSGDKQVQYPQMVAREVVEKGCQLPALRDEIYVQIIKQLTDNPNNESTQKLWQLMQLCLLHFPPTNMFEHYLESFLR-NKGGEPRWYTIRTLHDTQENGVQPV-PSGEQIDVLI 1315
BLAST of mRNA_H-canaliculatus_F_contig12802.2335.1 vs. uniprot
Match: A0A7S0GZ93_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GZ93_9EUKA) HSP 1 Score: 95.5 bits (236), Expect = 8.850e-20 Identity = 53/153 (34.64%), Postives = 93/153 (60.78%), Query Frame = 1
Query: 19 MASSFLEWTSEPIHKSLTDVSGLKGE-AKKQFKNLLGYCGDRKYQYPDPLIRDIVAKGVEMEQLRGELYVHAMKQLTKNPNPASVQRCWEMVTMLLTCFPPPKDLENYVHYFVRCNAPSDTREKFKLAVHMSVYDGVKTTAPSVKDIPPLLSG 474
+A S L++T+ PIH +LT+ + A K FKNL+G+ GDR Y+ L ++I +G+E E +R EL++H +KQLT NP+P S +R W+ +++LL F PP L+N++ ++ NA + + K ++ ++Y G + + S + ++ G
Sbjct: 218 LAQSMLKFTTYPIHAALTETNAKSNNLAIKLFKNLMGFMGDRTYKNAVLLSQEICKEGLENEDIRDELFLHTIKQLTANPSPKSRERGWQHLSLLLHTF-PPSGLDNFLDKWIMDNA-KERKAKLLHILYATLYTGKRYSPLSDDETKNVMDG 368 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12802.2335.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12802.2335.1 >prot_H-canaliculatus_F_contig12802.2335.1 ID=prot_H-canaliculatus_F_contig12802.2335.1|Name=mRNA_H-canaliculatus_F_contig12802.2335.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=162bp MASSFLEWTSEPIHKSLTDVSGLKGEAKKQFKNLLGYCGDRKYQYPDPLIback to top mRNA from alignment at H-canaliculatus_F_contig12802:486..3326+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12802.2335.1 ID=mRNA_H-canaliculatus_F_contig12802.2335.1|Name=mRNA_H-canaliculatus_F_contig12802.2335.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2841bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12802:486..3326+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12802:486..3326+ >mRNA_H-canaliculatus_F_contig12802.2335.1 ID=mRNA_H-canaliculatus_F_contig12802.2335.1|Name=mRNA_H-canaliculatus_F_contig12802.2335.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=972bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12802:486..3326+ (Hapterophycus canaliculatus Oshoro5f female)back to top |