mRNA_H-canaliculatus_F_contig1277.2304.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1277.2304.1
Unique NamemRNA_H-canaliculatus_F_contig1277.2304.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1277.2304.1 vs. uniprot
Match: D7G795_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G795_ECTSI)

HSP 1 Score: 337 bits (864), Expect = 4.650e-103
Identity = 171/222 (77.03%), Postives = 193/222 (86.94%), Query Frame = 1 
Query:  100 KENLRENVVAMGGSFDVNLTTSTTHLVAATTDTEKYRVATGMKGVVVVRPDWVLQSRREGRKLPCERHTLPPFEGLRITVTGLSSDRKAEMRAMIESGGGEYMGAMEARSTTHLVAEAAAGLKYEAAVSPEWNGSIKVVHSRWLSESLSRKREWGPATGWGVHGGSAGGDGRAEGVPSKEEALALPDGDYLSGCRLMIVGFEAESLVPLSLLVRKGCGVRCV 765
            +E+LRE V AMGGSFDVNLT STTHL+AA+ DTEKYRVATGMKGVVVVRPDWV++S REGRKLPCE H+LPPFEGLRIT+TGLS DRKAE+RAMIESGGGEYMGAMEAR+TTHLVAE A G+KYEAA+SPEWNGSIKVVHSRWL +S +R R             +AGG GR EGVP+KEEALALPDGDYLSGCR+MIVGF AE+++PLSLLVRKGCG+R +
Sbjct:   21 QEDLREKVNAMGGSFDVNLTMSTTHLLAASLDTEKYRVATGMKGVVVVRPDWVIESCREGRKLPCECHSLPPFEGLRITITGLSMDRKAELRAMIESGGGEYMGAMEARNTTHLVAEEATGMKYEAAISPEWNGSIKVVHSRWLQQSHARNRG----------NDAAGGGGRPEGVPTKEEALALPDGDYLSGCRVMIVGFPAEAVLPLSLLVRKGCGIRYI 232
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BLAST of mRNA_H-canaliculatus_F_contig1277.2304.1 vs. uniprot
Match: A0A6H5KJL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJL2_9PHAE)

HSP 1 Score: 301 bits (771), Expect = 3.460e-90
Identity = 177/337 (52.52%), Postives = 201/337 (59.64%), Query Frame = 1 
Query:   67 VVCSTGVTTTIKENLRENVVAMGGSFDVNLTTSTTHLVAATTDTEKYRVATGMKGVVVVRPDWVLQSRREGRKLPCERHTLPPFEGLRITVTGLSSDRKAEMRAMIESGGGEYMGAMEARSTTHLVAEAAAGLKYEAAVSPEWNGSIKVVHSRWLSESLSRKRE----WGPATGWGVH------------------------------------------------------------------------------GG------------------------SAGGDGRAEGVPSKEEALALPDGDYLSGCRLMIVGFEAESLVPLSLLVRKGCGVR 759
            V+C   +    +E+LRE V AMGGSFDVNLT STTHL+AA+ DTEKYRVATGMKGVVVVRPDWV +S REGRKLPCERH+LPPFEGLRIT+TGLS DRKAE+RAMIESGGGEYMGAMEAR+TTHLVAE A G+KYEAA+SPEWNGSIKVVHSRWL +S +R +     W PA    +H                                                                              GG                        +A   GR EGVP+KEEALALPDGDYLSGCR+MIVGF AE+++PLSLLVRKGCG+R
Sbjct:   13 VLCVNLLLGETQEDLREKVNAMGGSFDVNLTMSTTHLLAASLDTEKYRVATGMKGVVVVRPDWVTESCREGRKLPCERHSLPPFEGLRITITGLSLDRKAELRAMIESGGGEYMGAMEARNTTHLVAEEATGMKYEAAISPEWNGSIKVVHSRWLQQSHARNQARSPAWKPAPIVDIHPAERSDRPFCIVFPPLLLALSLPVRLPEEQFPVAPHHDEKQXXXXXXXXXXXXGKREGAHEAPTQDSGKGRQXXXXXXGGPAEPSSTAAASSRYPWANGEGDNDAAAAGGRPEGVPTKEEALALPDGDYLSGCRVMIVGFPAEAVLPLSLLVRKGCGIR 349
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BLAST of mRNA_H-canaliculatus_F_contig1277.2304.1 vs. uniprot
Match: L8HKJ6_ACACA (Subunit of DNA polymerase II n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HKJ6_ACACA)

HSP 1 Score: 110 bits (275), Expect = 8.760e-24
Identity = 60/166 (36.14%), Postives = 97/166 (58.43%), Query Frame = 1 
Query:   55 LHGVVVCSTGVTTTIKENLRENVVAMGGSFDVNLTTSTTHLVAATTDTEKYRVATGMKGVVVVRPDWVLQSRREGRKLPCERHTLPPFEGLRITVTGLSSDRKAEMRAMIESGGGEYMGAMEARSTTHLVAEAAAGLKYEAAVSPEWNGSIKVVHSRWLSESLSRK 552
            L G VVCST ++  ++  L + V+ MGG + ++ T + TH++A    +EKY+VA       +V P WV +  ++   +P ++  +PPF GL +TVTG   D + +M+ +    GG+Y   +  RS THL+ E     K++ A+   W GS+KVVH RWL ES+ ++
Sbjct:  101 LLGAVVCSTAISADMRSALVQRVLWMGGEWHMDFTNTVTHMLAYMPGSEKYKVAVQRGRPALVHPSWVTECWKQQALVPIDQFPVPPFTGLTMTVTGFPHDEREKMKRLCMQHGGQYSSDLN-RSCTHLIVERPGSKKHQYALL--W-GSVKVVHPRWLYESVEKR 262
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BLAST of mRNA_H-canaliculatus_F_contig1277.2304.1 vs. uniprot
Match: A0A067CQH2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CQH2_SAPPC)

HSP 1 Score: 100 bits (249), Expect = 1.950e-20
Identity = 77/243 (31.69%), Postives = 118/243 (48.56%), Query Frame = 1 
Query:   67 VVCSTGVTTTIKENLRENVVAMGGSFDVNLTTSTTHLVAATTDTEKYRVATGMKGVVVVRPDWVLQSRREGRKLPCERHTLPPFEGLRITVTGLSSDRKAEMRAMIESGGGEYMGAMEARSTTHLVAEAAAGLKYEAAVSPEWNGSIKVVHSRWLSESLSRKREWGPATGWGVHGGSAGGDGRAEGVPSKE--------EALAL----PDGDYLSGCRLMIVGFEAESLVPLSLLVRKGCGVR 759
            +VCSTG+T       +  V  +G S+D +L    THL+A T  ++KY+ A    G+VVV+PDW+++  R G  +P   H L   EGL I  TGL  + +  +  + +     Y   +   +T+HL+AE A G KY+AA++      I VV  +W++  +  K           +   A  D   +  PS          + +AL    P GD+L GC L + GF  + L+ +  LVR G G R
Sbjct:    9 IVCSTGLTPEENTGAQGLVHELGMSWDDDLHVGVTHLLAKTVGSDKYKAAIAA-GMVVVKPDWLVECSRAGSIVPTAAHELGILEGLCICTTGLYMEDREMVEQLCDEHRAVYQTDLIFGTTSHLLAEQAGGAKYDAAIAH----GIPVVTLQWMAACVEAKA----LVDEDNYRVLADDDVTLDDGPSSSMKLSDELTQCIALLRDEPRGDFLDGCVLWLPGFSQDILLKMKWLVRFGMGTR 242
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BLAST of mRNA_H-canaliculatus_F_contig1277.2304.1 vs. uniprot
Match: A0A329RTN7_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RTN7_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.040e-18
Identity = 63/165 (38.18%), Postives = 92/165 (55.76%), Query Frame = 1 
Query:   61 GVVVCSTGVTTTIKENLRENVVAMGGSFDVNLT-TSTTHLVAATTDTEKYRVATGMKGVVVVRPDWVLQSRREGRKLPCERHTLPPFEGLRITVTGLSSDRKAEMRAMIESGGGEYMGAMEARSTTHLVAEAAAGLKYEAAVSPEWNGSIKVVHSRWLSESLSRK 552
            G+V+CSTG+   +KE +R+ VVA GG F+ +L  T+TTHL+A +  + KYR A  +  + V  P WV +S R  + L  +   L   EG+ I   GL+ + K  +     + G +Y G +E   T+ L+A+   G KYEAAV+ +    I VVH  WL   L RK
Sbjct:   10 GLVLCSTGLELDVKEQVRKIVVACGGRFEDDLDPTTTTHLIAESVGSLKYRAAV-VHELPVASPRWVFESFRAQKLLNAKDFGLRLLEGMGICTAGLTMEEKEAVAQQATANGAQYDGRLELGFTSILIAQHPEGAKYEAAVAND----IPVVHLGWLYACLERK 169
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BLAST of mRNA_H-canaliculatus_F_contig1277.2304.1 vs. uniprot
Match: K1PRR5_CRAGI (DNA topoisomerase 2-binding protein 1 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=K1PRR5_CRAGI)

HSP 1 Score: 95.1 bits (235), Expect = 1.640e-18
Identity = 60/169 (35.50%), Postives = 91/169 (53.85%), Query Frame = 1 
Query:   64 VVVCSTGVTTTIKENLRENVVAMGGSFDVNLTTSTTHLVAATTDTEKYRVATGMKGVVVVRPDWV------LQSRR-EGRKLPCERHTLPPFEGLRITVTGLSSDRKAEMRAMIESGGGEYMGAMEARSTTHLVAEAAAGLKYEAAVSPEWNGSIKVVHSRWLSESLSR 549
            VVVC T +   ++  L E V AMGG+   +LT+S THL+A    ++KY+VA    G  +  P WV       Q++   G       ++ P F+GL ITV+GL S+ + +++  +E  GG+Y G M+    THL+     G KYE A   +W   I +V S WL +S+ +
Sbjct:  111 VVVCCTNLVKQLRNELHEKVEAMGGTVSRDLTSSVTHLIAGEVGSKKYQVAASA-GKQIYLPSWVNKVWEASQTKHIHGSSSQFLEYSCPIFKGLVITVSGLDSEERNQVKKAVEDEGGKYTGEMKVNECTHLIINKPKGAKYEFA--KKWR--INIVKSDWLYDSIEK 274
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BLAST of mRNA_H-canaliculatus_F_contig1277.2304.1 vs. uniprot
Match: UPI00148AD0A1 (DNA topoisomerase 2-binding protein 1-A n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148AD0A1)

HSP 1 Score: 95.1 bits (235), Expect = 1.720e-18
Identity = 60/169 (35.50%), Postives = 91/169 (53.85%), Query Frame = 1 
Query:   64 VVVCSTGVTTTIKENLRENVVAMGGSFDVNLTTSTTHLVAATTDTEKYRVATGMKGVVVVRPDWV------LQSRR-EGRKLPCERHTLPPFEGLRITVTGLSSDRKAEMRAMIESGGGEYMGAMEARSTTHLVAEAAAGLKYEAAVSPEWNGSIKVVHSRWLSESLSR 549
            VVVC T +   ++  L E V AMGG+   +LT+S THL+A    ++KY+VA    G  +  P WV       Q++   G       ++ P F+GL ITV+GL S+ + +++  +E  GG+Y G M+    THL+     G KYE A   +W   I +V S WL +S+ +
Sbjct:  111 VVVCCTNLVKQLRNELHEKVEAMGGTVSRDLTSSVTHLIAGEVGSKKYQVAASA-GKQIYLPSWVNKVWEASQTKHIHGSSSQFLEYSCPIFKGLVITVSGLDSEERNQVKKAVEDEGGKYTGEMKVNECTHLIINKPKGAKYEFA--KKWR--INIVKSDWLYDSIEK 274
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BLAST of mRNA_H-canaliculatus_F_contig1277.2304.1 vs. uniprot
Match: A0A433QVG0_9FUNG (Uncharacterized protein n=3 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QVG0_9FUNG)

HSP 1 Score: 90.5 bits (223), Expect = 6.360e-17
Identity = 62/171 (36.26%), Postives = 97/171 (56.73%), Query Frame = 1 
Query:   52 LLHGVVVCSTGVTTTIKENLRENVVAMGGSFDVNLTTSTTHLVAATTDTEKYRVATGMKGVVVVRPDWVLQSRRE---GRKLPCER----HTLPPFEGLRITVTGLSSDRKAEMRAMIESGGGEYMGAMEARSTTHLVAEAAAGLKYEAAVSPEWNGSIKVVHSRWLSESL 543
            L H ++ CS G  T  ++ + + V  MGG +  NLT   THL+A T D+EKY+VA  +  + V+R +WV    +    G  +  ++    + LPPF  + I VTG S +++ ++R   ES GG Y   +  ++TTHL+A+A  G KYE AV  +W   I+VV  +W  +S+
Sbjct:   14 LKHSLICCS-GFPTEERDVIYQKVREMGGDWHPNLTRDVTHLIANTIDSEKYKVAVRLS-IPVMRAEWVHAMHQRWLAGEVVDLQKFSAEYLLPPFLDIVICVTGFSPEQREDIRRQTESLGGNYHADLS-KATTHLIADAPNGKKYEFAV--KWR--IQVVSLKWFFDSV 177
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BLAST of mRNA_H-canaliculatus_F_contig1277.2304.1 vs. uniprot
Match: A0A507CC56_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507CC56_9FUNG)

HSP 1 Score: 88.6 bits (218), Expect = 3.010e-16
Identity = 57/175 (32.57%), Postives = 100/175 (57.14%), Query Frame = 1 
Query:   55 LHGVVVCSTGVTTT-IKENLRENVVAMGGSFDVNLTTSTTHLVAATTDTEKYRVATGMKGVVVVRPDWVLQSRREGRKLPC-------ERHTLPPFEGLRITVTGLSS-DRKAEMRAMIESGGGEYMGAMEARSTTHLVAEAAAGLKYEAAVSPEWNGSIKVVHSRWLSESLSRK 552
            L G++ CSTG+    +++++ + +V MGG ++   T+ T+HL+A +T + KY+ A  ++  VV +P+W+     + R  P        + + LPPF GL I VTG +   ++++++ +IE  GG +   +  ++ THLVA A  G KY+ AV   W   + +V   WL ES+ +K
Sbjct:    8 LEGMLFCSTGLPANQLRDDMIDRIVKMGGQYNAAFTSDTSHLIALSTVSPKYKYAAKLEKPVV-KPEWIEVCWNQCRSSPSFDALSIMDEYRLPPFGGLVICVTGFTGVAQRSDIKKLIEDNGGVFSADL-LKTCTHLVASAPTGKKYDFAV--RWK--LMIVSLVWLEESVQKK 176
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BLAST of mRNA_H-canaliculatus_F_contig1277.2304.1 vs. uniprot
Match: A0A8B8EDC5_CRAVI (DNA topoisomerase 2-binding protein 1-like isoform X1 n=2 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8EDC5_CRAVI)

HSP 1 Score: 88.2 bits (217), Expect = 4.040e-16
Identity = 58/169 (34.32%), Postives = 89/169 (52.66%), Query Frame = 1 
Query:   64 VVVCSTGVTTTIKENLRENVVAMGGSFDVNLTTSTTHLVAATTDTEKYRVATGMKGVVVVRPDWV------LQSRR-EGRKLPCERHTLPPFEGLRITVTGLSSDRKAEMRAMIESGGGEYMGAMEARSTTHLVAEAAAGLKYEAAVSPEWNGSIKVVHSRWLSESLSR 549
            VV+C T +    +  L E V AMGG+   +LT + THL+A    ++KY+VA    G  +  P WV       Q++   G       +  P F+GL ITV+GL S+ + +++  +E+ GG+Y G M+    THL+     G KYE A   +W   I +V S WL +S+ +
Sbjct:  111 VVLCCTNLVKQKRNELHEKVEAMGGTVSRDLTNNVTHLIAGEVGSKKYQVAAST-GKQIYLPCWVDKVWEASQTKHIHGSSSQFLEYACPIFKGLVITVSGLDSEERNQVKKAVEAEGGKYTGEMKVNECTHLIINKPKGPKYEFA--KKWK--IHIVKSDWLYDSIEK 274
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1277.2304.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G795_ECTSI4.650e-10377.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJL2_9PHAE3.460e-9052.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
L8HKJ6_ACACA8.760e-2436.14Subunit of DNA polymerase II n=1 Tax=Acanthamoeba ... [more]
A0A067CQH2_SAPPC1.950e-2031.69Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A329RTN7_9STRA1.040e-1838.18Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
K1PRR5_CRAGI1.640e-1835.50DNA topoisomerase 2-binding protein 1 n=1 Tax=Cras... [more]
UPI00148AD0A11.720e-1835.50DNA topoisomerase 2-binding protein 1-A n=1 Tax=Cr... [more]
A0A433QVG0_9FUNG6.360e-1736.26Uncharacterized protein n=3 Tax=Jimgerdemannia fla... [more]
A0A507CC56_9FUNG3.010e-1632.57Uncharacterized protein n=1 Tax=Synchytrium microb... [more]
A0A8B8EDC5_CRAVI4.040e-1634.32DNA topoisomerase 2-binding protein 1-like isoform... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1277contigH-canaliculatus_F_contig1277:20709..27380 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score339.7
Seed ortholog evalue1.2e-90
Seed eggNOG ortholog2880.D7G795
KEGG koko:K03507,ko:K10728
KEGG Pathwayko03440,map03440
EggNOG free text desc.protein localization to site of double-strand break
EggNOG OGsKOG1929@1,KOG1929@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03032,ko03400
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionBRCT domain
Ec32 orthologEc-04_003680.1
Exons6
Model size765
Cds size765
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1277.2304.1prot_H-canaliculatus_F_contig1277.2304.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1277 20709..27380 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928998.0739834-CDS-H-canaliculatus_F_contig1277:20708..208101622928998.0739834-CDS-H-canaliculatus_F_contig1277:20708..20810Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1277 20709..20810 +
1696845644.002437-CDS-H-canaliculatus_F_contig1277:20708..208101696845644.002437-CDS-H-canaliculatus_F_contig1277:20708..20810Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1277 20709..20810 +
1622928998.1018708-CDS-H-canaliculatus_F_contig1277:23665..237911622928998.1018708-CDS-H-canaliculatus_F_contig1277:23665..23791Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1277 23666..23791 +
1696845644.0160017-CDS-H-canaliculatus_F_contig1277:23665..237911696845644.0160017-CDS-H-canaliculatus_F_contig1277:23665..23791Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1277 23666..23791 +
1622928998.1192079-CDS-H-canaliculatus_F_contig1277:24869..249961622928998.1192079-CDS-H-canaliculatus_F_contig1277:24869..24996Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1277 24870..24996 +
1696845644.024126-CDS-H-canaliculatus_F_contig1277:24869..249961696845644.024126-CDS-H-canaliculatus_F_contig1277:24869..24996Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1277 24870..24996 +
1622928998.1343722-CDS-H-canaliculatus_F_contig1277:25201..252961622928998.1343722-CDS-H-canaliculatus_F_contig1277:25201..25296Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1277 25202..25296 +
1696845644.0330064-CDS-H-canaliculatus_F_contig1277:25201..252961696845644.0330064-CDS-H-canaliculatus_F_contig1277:25201..25296Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1277 25202..25296 +
1622928998.1506424-CDS-H-canaliculatus_F_contig1277:26182..262911622928998.1506424-CDS-H-canaliculatus_F_contig1277:26182..26291Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1277 26183..26291 +
1696845644.044794-CDS-H-canaliculatus_F_contig1277:26182..262911696845644.044794-CDS-H-canaliculatus_F_contig1277:26182..26291Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1277 26183..26291 +
1622928998.169684-CDS-H-canaliculatus_F_contig1277:27174..273801622928998.169684-CDS-H-canaliculatus_F_contig1277:27174..27380Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1277 27175..27380 +
1696845644.05315-CDS-H-canaliculatus_F_contig1277:27174..273801696845644.05315-CDS-H-canaliculatus_F_contig1277:27174..27380Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1277 27175..27380 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1277.2304.1

>prot_H-canaliculatus_F_contig1277.2304.1 ID=prot_H-canaliculatus_F_contig1277.2304.1|Name=mRNA_H-canaliculatus_F_contig1277.2304.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=255bp
MKRSRGGTREARERAEGLLHGVVVCSTGVTTTIKENLRENVVAMGGSFDV
NLTTSTTHLVAATTDTEKYRVATGMKGVVVVRPDWVLQSRREGRKLPCER
HTLPPFEGLRITVTGLSSDRKAEMRAMIESGGGEYMGAMEARSTTHLVAE
AAAGLKYEAAVSPEWNGSIKVVHSRWLSESLSRKREWGPATGWGVHGGSA
GGDGRAEGVPSKEEALALPDGDYLSGCRLMIVGFEAESLVPLSLLVRKGC
GVRCV
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mRNA from alignment at H-canaliculatus_F_contig1277:20709..27380+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1277.2304.1 ID=mRNA_H-canaliculatus_F_contig1277.2304.1|Name=mRNA_H-canaliculatus_F_contig1277.2304.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=6672bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1277:20709..27380+ (Hapterophycus canaliculatus Oshoro5f female)
ATGAAACGGAGCCGCGGCGGAACAAGAGAGGCAAGAGAGAGGGCTGAAGG
ATTACTACATGGCGTGGTAGTCTGCTCCACAGGTGTCACCACCACCATCA
AGGTCAGATTTGCTTTAAGTTTCTGACGCAAAATATTACACGGTTATCTG
ATTTCCTCTACAAAAACGAGGGCCGTACGGATGTATTTGTACATTTGTAC
TCGAAGCACCTGTAGTACACGCGGGTTTACTCCCTGCAGCAGTAGCTCCT
TGTGCTTGTCGGTGGACGTTTCCTGCGAAGTTCGTATTGTTATACGGTAG
TCGCGATCTCAGTGACAACGTGGAAATCCACCCGCGCAGTGGATGATGCA
GTGAGTTCACGATCCTCGGTTGTTCCCATACGGATCTACAAAGTGTCAAC
CGGCATCTACCTCCCCCGACCTGCTTTTTCTCGCTGCTCTTCGTTTTTAT
GTCCGACGGATGAACCATATCGATAGCACGGTCAATCCAGCTCTCTCGTA
CCATCCCACAGAGCCTTGCGAACCTTAACCTTACCTCTTCATTCGCAGCG
GGCGCGCGAATACTGCAAACTAACCCTCTGCTGTGGGTGGAACCCTTCCT
TGGCGACCATAAACCTCACCCAGGGGGGGGCGGGAGGTGGCTACCGTATA
TGACACAAGATAACACACCCCCTGGACCGATTTTCAGACCTCAATTACTC
CGCAACAAGTACGATTCCAACCTCAAATGACATGTTTTCTGACAGATCTT
GAAGAGTCCAAGAGATCTTCCCAACGCCGCTCTTTCTGGGACTGGTGTGC
CTCTTGCTGTGGAGGAAATGAGGTTTGAAAATCCGTCCAGGGGGTGTATT
ATCTTGTGTCATATACGGTACGTGGGTGCAGAGTAACCCACCGGCGGCCC
CTCAGCGCCGTCAGCGCCGTTAGGCCACGCATGGCAACGAGCGAGTTCTT
CCACGCCACGACTCATCGTGTCGTTGCCGTCAGCAACACCACTCGGGTGC
TCGTATTGTTTGTGCTGTATGTACAAGTATCATAGGGGCAAGCACGCCGA
TGCTCGCGGCGCCTACGAACAAAAACACAATGTACAAAGATACCTCTCAC
CCCGTGTTGGCGGCGGGGGGGAGCACACATGGTGGCTGCACGGCTGGGGC
GAAACACTCGAGAAACGAGCGGCGTCTATCCTCTGGGGCGTCGCGGGCAT
GCCTGCCGAGGGGAGTTCATTGTCTGGAAAGGCGGGTCTTGGAAGGCAGC
AACACTCGCTAACGCAACTGCAGCTGGGGAGAACAAAAGATAGCGCACAG
GAAAAAAGCAAAAGGGAAAAGTCGCTCGGGGAGACTTGAGGCGCATTCCC
GAAGAGGCAACGGGCCCACCGTTGTGAGAAGTGAGAGGCGATCACGCAAG
CGCCACCGTTAGCGTCAGCGATAACCACGAAAGACGGCAGTGATATGTAC
GAAAAGACGGTCAACCTCCGCCGTCACCCTCTCACGCAGCTCCCGGTCCC
GGGACTCCCAATGACCCCACGTTTCCCCTCGACCGGAACTCTCGGGATCG
AAGTCCCTCCGGCCTGCGGACTCTCTCCCCGAACTCCTCGTCACAGCGGG
TCTCACACAAGCGCCACTTCCAACCACGCCCACATTTCTTGTCTTTGAAT
GAAATACGCCTATGTGTGGAGACCGCGGCTGTCTCAAGAGACAAACGATT
TGCCTCCTTCGCCGAGGCAAACAGAACGCCCGTCGTCAGCCCCGATGGCG
CACGAAACCATGTCGACGGACAGCAACAGCCTCGTTGCGAGGAGCGCATC
GGCAGCGGTCGTTCCTTTATCCTTTTTCCGCGGGCGCGCGCGGCCTTGGG
GAAGGAGGAGGAGACCGACGAATTTACGCATCGGAGAGGAGGTGTGCGTT
GTTCTGGTGTAGCGTCGGTCTCCTTCGCCGCGGAGAGAACGGTGTGGTGT
TGCGGGGTTGGTTTTGGTGTTTCCTGGCTTGTGCCCGCATCGAGTCGGCG
TCGCCGTACGGGGGCGTCTGACGACCGAACATCTAGCGACCGATCCATCC
ACCAACGAGCGGATCGAGTTGATGCGCCCCGTGCGATCATGCGCCACGGA
CCATCTTTGTTTTTGTCGGAAATAAAGAGTCAGCGACAAGGAAGGAGAAA
GGAATGCCCTCCTCCTGAGACACGTCTCACGAGGAGGCCTCTCAGGAGGC
TTGGGTCGAACTCCATACGGGTAGGGTTCGGTGCGTTGGACGGGTAAAAA
CACAAAAGTGCAGGATTTCCTTCTTTTCTTTCTTTCTATTCCTTTTTTCA
GGGGATATGCTCCTTTTCCCTGTCGTCGATTGCATGCAAGTGCATCTGCT
TGTCGTTTGTCTCCTCAGTCTTCACCTGTTTATCTTGCCTCGTCTTTTTC
ACGTCTGACCGGTGTAAGCGGCTTCTCTTGGACCTACTTGTGTGACGCTT
TTTTCTTGCGAAAAGAGGGTAAAAGAGGGTATACCTTATATTTTCGGTGG
ATCGCCTGTGACCACGGAAGTTCCCGAGACGGAATGTTTTTAATGTGACA
ACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC
AACAGCTCCTGCACAAACTTTGGCTTTACCGTCGACGAGCGAGAGGGAAT
GCCGAGCCCCCACTTCCGCGATAAAAACGAAGGCAAGCACCGTAGGCAGA
AGATGGAGAAAGAAAACGAACGAAAGAAACGAAAAAAAACTCCGGTCATG
ACCTTCCTCCTGTGTGACCCCGAGTGAAACACCGCAAGAGTTGTCGACCG
GTCCACGAAGCATGGGATGACAACACACATGCACTCTCTCTCTCTGTCTC
TCTCTCGCGCGCACGCGCTCCTGCCAATACTCAACGGCGCACCGCCGTGA
TCCCCCCCCCCCGCCCCCGCCTCATCTTCTTTCGTTTGCGTTTCTTACCT
TTGACAGGAGAACCTCAGGGAAAACGTGGTCGCCATGGGCGGGAGCTTCG
ACGTCAACCTCACCACTAGCACCACCCATCTCGTGGCCGCCACCACCGAC
ACGGAGAAGTACAGGGTTGCCACGGGCATGAAGGTAGCGTGGCACGATTG
GGTGGCTGGGTTCCACCGTCTTCCGTGGGATTTGACGGATTTGACCTTGT
CTCATTGGTTTGGCCGACTGGGTGGGTGGGTGGGTGGGTGGGTGGGTGAC
CGACTGATCTTGTCGGTGTCGGCGTGCGCGCGCGTTCATCACTTCTCTCC
ACCTCTCTTTCTTCGTCGCCGCTGCTGTGTGGCGTCGACCTCTCAAAGCT
GGCTGGCCGATGTTGAAGCCCCAGCTTCACGGGCGGGCTTTCTTCGAGTA
GCACTGCTGTTGTTCCAGATCATCGTTCTCCGATGCTCCGCAAGAGGTGG
GGCAGGGGGGGGGGGCAGGAGCGGGGGAGGGGACGACAGGAGGACGGAGG
TCCGCCCGCCCGGCCGCTTGCTTGCAGATCTCCGGGATTGCACAGCGAGC
AGGGGAAAGAAAACACCAAGGCGGGCGATCATCGTGGCTTGTTTCCAAAA
CTTCTTTTCTCTCGCGTCTCGCGCGCGGATCTCTGCGGCTACATGGTTGT
TTCAGTTTCAGCTTTTTTTTGCCGCTAAACGGCGTCGTCGAAATCTCTCC
CCTGGCCTCTCCCCTGTGCTCCGAAGGCTTGAAGTGGCTGTATTTTGGCC
CGGGCTAGGTGTTTGCGCCGGGATGTGCCGCGGCGTTTTGAGTGCCGTTT
CGTGGTGAGGAGGTCCGGTAGTACCAGGTGGTTCGTTTCCATTCCGCCAT
CGGCGTAGGTAGGGGTGACTCTCTCTTGGTGGGGATCGTTTCGGATTGCC
TCTCGGCGGCAACGATAAAACTGGGACGCAAAAACGACTCCGTTGACTCG
ATGTTGTTCGCCGGCGACGCATACGCTGTGCCCGTTTGTGTCCGTTTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGGTGTGTGTGTGTGTGTT
GTGTGTTGGTGTGTGTGTGTGTGTGTTGTTTTTGGCGCGTTTCTCTGCTT
GTTCGTGTGTCTTTGTGTCTGTCAACCCGTCCGTCCACTTCGGCTCTGCC
CCCCTCCCCCCGTAATAATGCCCCCATTGTGCTCGTGCTTCGTGCCCCCG
TGCGAAAAAAGGGCGTCGTTGTCGTCCGGCCCGATTGGGTTCTCCAGAGC
CGCAGGGAGGGTCGCAAGCTACCGTGCGAGCGCCACACCCTCCCTCCTTT
CGAGGGGCTCCGCATAACGGTCACCGGCCTGTCCTCAGGTAAGCACGGCA
GAGTGTTTGGTTTTGCTCTTGTCGTTGCTTTTGCTGCCGAACGTCTCATG
GAAAACGGGGAGAAGATGTGGTGCAGATCCCCCCGCTTCTCATCTGAAAG
TATGCTGGTACAGCCTAACTTTCCGCGGCGTGGTTGCCCATGACTCCCCC
GCCCCCTCCGAACCTCTCTCTGGACTTGTCGTCGACGCCCTAGATCGGAA
GGCGGAAATGCGGGCGATGATCGAGAGCGGCGGGGGGGAGTACATGGGGG
CGATGGAGGCCCGCAGCACCACGCACCTCGTGGCGGAGGTGCGAGCGGCT
TGTGTCGCGCTGTTGTCTCGTGGACTTATTTCTTGATTCCCAGTAGCGTG
CCCCCCCATTGTCTCACGAGGCCTCTGTTGATGGCGCTGGCTCACCGGCT
GACCAACATTTCGAAAAGGAGCCTTGTTGCACCGCAGCGGGATCCGTAAC
TTGGGGGACGGGGACGGGGACGGGGACGGGGGTCGAAGTAGACGTGGTGC
CATTGTCCTGTCCGCCTCCAGACTGATGGGTGCTTTGCTGGAGAGGAGTC
CAGGCATGGAAATGGCTCGTCTTCTCCTCGCCCTGCTTTTGTCTCTTGGG
GACGCGCGCTGCGGTGCTTCATCTTCTGCGACACGGCTTGTGCTGCTCTG
CTGTCAGCCAGTCTGCCTCGGCGGTTTCGCTCTTTCGCGGGCGATGCTGT
GGCGAGGAGCACGCGGGGGACCTACACTGCGAGGGCGTCTTGAGCGCTGC
TGGGAACCTGTGAATGGTTGCTCACGTCCGTCCGTCCGTCCGTCCGTCCT
TGCCTCGATACCTATCCCGTACTGCCGTTCGTTGTCACCCCTGACATGCG
CACACGGGCGTGCAACCGCTACCTGCGTATGTGCCCCCCCCGCCCCCCCC
CTCCTCCCCCTGCCTTCCCTCGCGTCTCTCCTGAGCCCTGGGCCCGCTAG
CGTCCGGCGGTGGCGCAGCGCCTGTCGAAGGGGTGTGGCCACGGAGGAAC
TACTCGTGAAAGTCTTGTTTTGGTCGTCGTGGCGCTGCCCTCTTGAGATA
CGGGGGGGAAAATGCCGATGCGTTTATCCCATCTCGCTCCCCGTCCCATG
ACGCTGCTCCGACCTCGTCCCGCTCGTACTCTGGCCCTGCCCCTGCCTCC
GGACCCTTGTTCTTCCCGTCGCAGGCCGCTGCCGGGTTGAAGTATGAGGC
GGCCGTCAGCCCCGAGTGGAACGGGAGCATCAAAGTCGTGCACAGCAGGT
GGCTATCGGAAAGCCTGTCTCGGAAGCGTGAGTGTGCCTGTTGTTGTTGT
TGTTGTTGTGGACTTGAGGCAGAAAACACTTCCGCGCCGGTTTCAGCCTT
CAAAGAAAGACATAAAAACACCGTAGGAACGCCTCCTGAGGTGTTTCGTG
CGAGACGTGCCTCGAGTTTTCGGTACAGGTTCCAACAATGAGGGTTCATT
GTGCAGGTAGGGACAAACACATGTCCAGCCTTGTTTTCCTTGTGTTCCCC
ACCGAGCTCGTAGGCGGTGCACTTGTTCGACCACACACATTCAGAAAATA
ACCCTTGAACGTTGGCGTATGTTTCACTAGTCCAGGAGCACGGAGATAGA
GATTGCGTATGGGTGGCGGGTGAGGGACAGGTGGCTATCTTGTCCCCCCC
CCCCCCAACACGCCCCTCCTCCTCCTCCTCCTCCTCGTCTCTTGTGATTT
TTTTCCCGTCATGCGTCTGCCTTGGTTCGCTCTCGGACAGTTCGGCTGCC
GGAGCAAAAGTTCCCGGTCGTCCCCAACCGACGGGGATCTCAAGAGAGGG
AGGAGGAGAGAGAAGAGGAGGAGAAGGAACAAGAAGAAGAGGAGGAGGAG
GTTGAAGGGGACGAGATGGAGAAAGAGGGGGAGCGGGGAGAACGTTCTGG
CGGACCTTCGAAGGAGGCGTACCACGCGCGAACGCAGCAAAGCTTGGAAA
ATCGACACCAGCAGCAGCAGGGTGGCGGAGCTACCTCAGCTGCGCTGGGG
GCGGCGCCAGGCACAGCGGCAACAGCGGCGGCGGCGACGGCAGCCGGGCC
CTTAGAAGCGCCTGACCCTAACGGCGCCGCTCGCGTCGACCGCTCGCGCT
ACCCCTGGTCGGCCGGCGCGTCGGCAGCTGCTGCTGCGGCGGCGGCGGCG
GGGGGGGAGGAGGGAGGGGGCCCGGCGACGGGATGGGGCGTCCATGGTGG
TTCCGCCGGAGGCGACGGGCGAGCAGAGGGGGTTCCTAGCAAGGAGGAGG
CGTTGGCACTCCCGGACGGGGACTACCTTTCCGGGTGCCGCTTGATGATC
GTCGGGTTCGAGGCGGAGTCGCTGGTGCCGCTATCGCTCCTGGTCCGGAA
GGGTTGCGGAGTCAGGTGTGTG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1277:20709..27380+

>mRNA_H-canaliculatus_F_contig1277.2304.1 ID=mRNA_H-canaliculatus_F_contig1277.2304.1|Name=mRNA_H-canaliculatus_F_contig1277.2304.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1530bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1277:20709..27380+ (Hapterophycus canaliculatus Oshoro5f female)
ATGAAACGGAGCCGCGGCGGAACAAGAGAGGCAAGAGAGAGGGCTGAAGG
ATTACTACATGGCGTGGTAGTCTGCTCCACAGGTGTCACCACCACCATCA
AGATGAAACGGAGCCGCGGCGGAACAAGAGAGGCAAGAGAGAGGGCTGAA
GGATTACTACATGGCGTGGTAGTCTGCTCCACAGGTGTCACCACCACCAT
CAAGGAGAACCTCAGGGAAAACGTGGTCGCCATGGGCGGGAGCTTCGACG
TCAACCTCACCACTAGCACCACCCATCTCGTGGCCGCCACCACCGACACG
GAGAAGTACAGGGTTGCCACGGGCATGAAGGAGAACCTCAGGGAAAACGT
GGTCGCCATGGGCGGGAGCTTCGACGTCAACCTCACCACTAGCACCACCC
ATCTCGTGGCCGCCACCACCGACACGGAGAAGTACAGGGTTGCCACGGGC
ATGAAGGGCGTCGTTGTCGTCCGGCCCGATTGGGTTCTCCAGAGCCGCAG
GGAGGGTCGCAAGCTACCGTGCGAGCGCCACACCCTCCCTCCTTTCGAGG
GGCTCCGCATAACGGTCACCGGCCTGTCCTCAGGGCGTCGTTGTCGTCCG
GCCCGATTGGGTTCTCCAGAGCCGCAGGGAGGGTCGCAAGCTACCGTGCG
AGCGCCACACCCTCCCTCCTTTCGAGGGGCTCCGCATAACGGTCACCGGC
CTGTCCTCAGATCGGAAGGCGGAAATGCGGGCGATGATCGAGAGCGGCGG
GGGGGAGTACATGGGGGCGATGGAGGCCCGCAGCACCACGCACCTCGTGG
CGGAGATCGGAAGGCGGAAATGCGGGCGATGATCGAGAGCGGCGGGGGGG
AGTACATGGGGGCGATGGAGGCCCGCAGCACCACGCACCTCGTGGCGGAG
GCCGCTGCCGGGTTGAAGTATGAGGCGGCCGTCAGCCCCGAGTGGAACGG
GAGCATCAAAGTCGTGCACAGCAGGTGGCTATCGGAAAGCCTGTCTCGGA
AGCGTGAGTGCCGCTGCCGGGTTGAAGTATGAGGCGGCCGTCAGCCCCGA
GTGGAACGGGAGCATCAAAGTCGTGCACAGCAGGTGGCTATCGGAAAGCC
TGTCTCGGAAGCGTGAGTGGGGCCCGGCGACGGGATGGGGCGTCCATGGT
GGTTCCGCCGGAGGCGACGGGCGAGCAGAGGGGGTTCCTAGCAAGGAGGA
GGCGTTGGCACTCCCGGACGGGGACTACCTTTCCGGGTGCCGCTTGATGA
TCGTCGGGTTCGAGGCGGAGTCGCTGGTGCCGCTATCGCTCCTGGTCCGG
AAGGGTTGCGGAGTCAGGTGTGTGGGGGCCCGGCGACGGGATGGGGCGTC
CATGGTGGTTCCGCCGGAGGCGACGGGCGAGCAGAGGGGGTTCCTAGCAA
GGAGGAGGCGTTGGCACTCCCGGACGGGGACTACCTTTCCGGGTGCCGCT
TGATGATCGTCGGGTTCGAGGCGGAGTCGCTGGTGCCGCTATCGCTCCTG
GTCCGGAAGGGTTGCGGAGTCAGGTGTGTG
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