mRNA_H-canaliculatus_F_contig12704.2256.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12704.2256.1 vs. uniprot
Match: D7FTM4_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTM4_ECTSI) HSP 1 Score: 358 bits (919), Expect = 1.220e-119 Identity = 177/210 (84.29%), Postives = 190/210 (90.48%), Query Frame = 1
Query: 1 DGSIHVVLEYMDRGSLGDVIHGWRGMEYGEDLMAAITFQILWGLGYLHYEHHVHRDVKPQNILLNSNGEVKLSDFGIARELQGETDLAQTMVGTIRYMSPERLAGTGYGVAADVWSLGVVLLEMAARRLPFENAVSQIELHDRLEARSGIAQERAVDDLIKLVPGHSPEFEEVLRGCLQANPDDRLRPEELLELEWFETFREPQPFLAEE 630
DGSIHVVLEYMDRGSL DVIHGWRGM+YGEDLMAAIT QILWGLGYLHYEHHVHRDVKPQN+LLNS+GEVKLSDFGIARELQGE DLAQTMVGTIRYMSPERLAG GYGVAADVWSLGV+LLEMAARRLPFE+AVSQIELHDRL+ Q+ AVDDLIKLVPGHSP+FE+VLRGCLQ P++RL P ELLEL+WF FREPQP + E
Sbjct: 135 DGSIHVVLEYMDRGSLSDVIHGWRGMDYGEDLMAAITLQILWGLGYLHYEHHVHRDVKPQNVLLNSHGEVKLSDFGIARELQGEMDLAQTMVGTIRYMSPERLAGDGYGVAADVWSLGVLLLEMAARRLPFESAVSQIELHDRLQ------QDLAVDDLIKLVPGHSPQFEQVLRGCLQPIPEERLTPAELLELDWFLRFREPQPPVVSE 338
BLAST of mRNA_H-canaliculatus_F_contig12704.2256.1 vs. uniprot
Match: A0A7S3UWL4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWL4_HETAK) HSP 1 Score: 203 bits (517), Expect = 1.720e-61 Identity = 109/199 (54.77%), Postives = 143/199 (71.86%), Query Frame = 1
Query: 4 GSIHVVLEYMDRGSLGDVIHGWRGMEYGEDLMAAITFQILWGLGYLHYEHHVHRDVKPQNILLNSNGEVKLSDFGIARELQGETDLAQTMVGTIRYMSPERLAGTGYGVAADVWSLGVVLLEMAARRLPFENAVSQIELHDRLEARSGIAQERAVDDLIKLVPGHSPEFEEVLRGCLQANPDDRLRPEELLELEWFETF 600
G+I+V+LE MDRGSL D+I+ + M E ++AAIT+QILWGLGYLHYE +HRD+KP NIL N++GE+KL+DFGIAREL ++++A T+VGT RYMSP RL G YG +D+WSLGV+L+E AAR LPF ++ +QIEL LE E +D++ L P S EF E++R CL P+DR R E+LLE W E F
Sbjct: 49 GNIYVILENMDRGSLNDLIYNYDDMP--EKVLAAITYQILWGLGYLHYEKRLHRDIKPSNILANNSGEIKLTDFGIARELD-DSNMASTIVGTFRYMSPGRLRGDPYGPPSDIWSLGVMLIECAARSLPFPSSNTQIELAQALE-------ELEIDEM--LPPDFSDEFCEMVRLCLAPAPEDRPRAEQLLEGPWLEKF 235
BLAST of mRNA_H-canaliculatus_F_contig12704.2256.1 vs. uniprot
Match: A0A7S2UX05_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX05_9STRA) HSP 1 Score: 199 bits (507), Expect = 3.560e-59 Identity = 101/195 (51.79%), Postives = 133/195 (68.21%), Query Frame = 1
Query: 10 IHVVLEYMDRGSLGDVIHGWRGMEYGEDLMAAITFQILWGLGYLHYEHHVHRDVKPQNILLNSNGEVKLSDFGIARELQGETDLAQTMVGTIRYMSPERLAGTGYGVAADVWSLGVVLLEMAARRLPFENAVSQIELHDRLEARSGIAQERAVDDLIKLVPGHSPEFEEVLRGCLQANPDDRLRPEELLELEWFE 594
I+VVLEYMDRGSL DVI + ++ E MAA+T+QILWGLGYLHYE +HRD+KP NIL+N G+VKL+DFGIARE+ ++ +A TM+GT +YMSPERL G Y + D+WSLG+VL+EM +R PF N +Q+++ L E +DLI G S E E ++ CLQ NP DRL E+L +L W +
Sbjct: 124 IYVVLEYMDRGSLTDVIQDYDRLD--ERYMAAVTYQILWGLGYLHYERRLHRDIKPSNILVNQEGKVKLTDFGIAREVDEDSKMATTMIGTYKYMSPERLKGDAYDSSGDIWSLGIVLIEMVTQRTPFPNVDNQLDMAQEL-------LEMKNEDLIPTGEGCSSELCEFIQACLQRNPADRLSTEQLFKLPWLD 309
BLAST of mRNA_H-canaliculatus_F_contig12704.2256.1 vs. uniprot
Match: A0A835Z5L4_9STRA (Mitogen-activated protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5L4_9STRA) HSP 1 Score: 176 bits (445), Expect = 1.650e-52 Identity = 81/122 (66.39%), Postives = 97/122 (79.51%), Query Frame = 1
Query: 1 DGSIHVVLEYMDRGSLGDVIHGWRGMEYGEDLMAAITFQILWGLGYLHYEHHVHRDVKPQNILLNSNGEVKLSDFGIARELQGETDLAQTMVGTIRYMSPERLAGTGYGVAADVWSLGVVLL 366
DG IHVVLE+MD G LGD+IH W + Y E +MAA Q+LWGL YLH+E +HRD+KPQNILL+S GEVKL DFGI+R L+ E+++A TMVGTIRYMSPERLAG YG D+WSLGV+LL
Sbjct: 34 DGCIHVVLEFMDMGCLGDMIHAWGHVAYDEQVMAAAALQVLWGLAYLHFERRLHRDIKPQNILLSSLGEVKLGDFGISRHLEEESEMAATMVGTIRYMSPERLAGEAYGAPGDIWSLGVLLL 155
BLAST of mRNA_H-canaliculatus_F_contig12704.2256.1 vs. uniprot
Match: A0A836C7K8_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7K8_9STRA) HSP 1 Score: 177 bits (450), Expect = 1.100e-48 Identity = 102/210 (48.57%), Postives = 132/210 (62.86%), Query Frame = 1
Query: 10 IHVVLEYMDRGSLGDVIHGWRGMEY-GEDLMAAITFQILWGLGYLHYEHHVHRDVKPQNILLNSNGEVKLSDFGIARELQGETDLAQTMVGTIRYMSPERLAGTGYGVAADVWSLGVVLLEMAARR------------LPFENAVSQIELHDRLEARSGIAQERAVDDLIKLVPGHSPEFEEVLRGCLQANPDDRLRPEELLELEWFETF 600
+HVVLE+MD GSL DVI+G+ G + E ++AAI +Q+LWGLGYLH+E +HRD+KP NILLN GEV+L+DFGIA ELQG+ +LA TMVGT RYMSPERL G YG AADVW LG+V+LE+A ++ PF N +QI+L+ LE + E + + S E LR CL A+P R+ L + F F
Sbjct: 147 VHVVLEHMDAGSLHDVIYGFTGGDLVPESVIAAIFYQVLWGLGYLHFERRLHRDIKPSNILLNRKGEVRLTDFGIATELQGD-ELASTMVGTFRYMSPERLRGDEYGAAADVWGLGLVILELATQQKLWSTSTSTYDSAPFVNCSNQIDLNQLLEE---VRMESFIPSRQR-----SSALCEALRSCLHADPQRRVPVPVLFDSPLFSDF 347
BLAST of mRNA_H-canaliculatus_F_contig12704.2256.1 vs. uniprot
Match: A0A7S1Z3W8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z3W8_9STRA) HSP 1 Score: 164 bits (415), Expect = 1.290e-45 Identity = 93/218 (42.66%), Postives = 129/218 (59.17%), Query Frame = 1
Query: 1 DGSIHVVLEYMDRGSLGDVIHGWRGMEYG---------------------EDLMAAITFQILWGLGYLHYEHHVHRDVKPQNILLNSNGEVKLSDFGIARELQGETDLAQTMVGTIRYMSPERLAGTGYGVAADVWSLGVVLLEMAARRLPFENAVSQIELHDRLEARSGIAQERAVDDLIKLVPGHSPEFEEVLRGCLQANPDDRLRPEELLELEWF 591
+G++ +VLEYMDRGSLG ++ G E A+I +Q+LWGLGYLH+E+ +HRDVKP N+L+N+ GEVKLSDFGIA + + ++ T+VGT RYMSPERL YG ++D+WSLG+VLLE + PFE+ SQ+EL +E E + D+ I V SP E+L+ CLQ +P+ R+ L+ WF
Sbjct: 125 EGTVTLVLEYMDRGSLGSLLGSDPGTNSSTSNHLSLISHVESNLGRNGLPEKATASIAYQMLWGLGYLHHENMIHRDVKPGNVLVNTRGEVKLSDFGIASQREVGQEMNVTVVGTTRYMSPERLRAKPYGSSSDLWSLGLVLLECCTGKSPFEDVTSQVELLLTVE-------ETSADEWIP-VDTLSPGLVEILKSCLQQSPERRIPASILIGSPWF 334
BLAST of mRNA_H-canaliculatus_F_contig12704.2256.1 vs. uniprot
Match: A0A7S2SL27_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SL27_9STRA) HSP 1 Score: 165 bits (418), Expect = 1.450e-45 Identity = 88/198 (44.44%), Postives = 122/198 (61.62%), Query Frame = 1
Query: 1 DGSIHVVLEYMDRGSLGDVIHGWRGMEYGEDLMAAITFQILWGLGYLHYEHHVHRDVKPQNILLNSNGEVKLSDFGIARELQGETDLAQTMVGTIRYMSPERLAGTGYGVAADVWSLGVVLLEMAARRLPFENAVSQIELHDR-LEARSGIAQERAVDDLIKLVPGHSPEFEEVLRGCLQANPDDRLRPEELLELEWF 591
+GSI + LEYMD+G LG V+ ++ + E ++AA+TFQ LWGLGYL + VHRD+KPQNIL NSNGEVKL+DFGI++EL+ L QT VGT +YMSPER+ Y A+D+WSLG+VL+E A P+ + I++ LE+ I ++ S EF + CL+ P +R+R + LL W
Sbjct: 166 EGSISIALEYMDQGCLGTVLENYQRIP--EPVLAAVTFQALWGLGYLRHAKRVHRDIKPQNILCNSNGEVKLTDFGISKELENSIGLCQTFVGTFKYMSPERIQSHPYSYASDIWSLGLVLMECAQGSYPYPECRTYIDMVQTILESPPPIPEKGTA----------SAEFIDFATCCLKKTPKERVRADVLLSAPWL 351
BLAST of mRNA_H-canaliculatus_F_contig12704.2256.1 vs. uniprot
Match: A0A7S3HFG8_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HFG8_9STRA) HSP 1 Score: 161 bits (408), Expect = 1.110e-44 Identity = 92/210 (43.81%), Postives = 123/210 (58.57%), Query Frame = 1
Query: 1 DGSIHVVLEYMDRGSLGDVIHGWRGMEYGEDLMAAITFQILWGLGYLHYEHHVHRDVKPQNILLNSNGEVKLSDFGIARELQGETDLAQTMVGTIRYMSPERLAGTGYGVAADVWSLGVVLLEMAARRLPFENAVSQIELHDRLEARSGIAQERAVDDLIKLVPGHSPEFEEVLRGCLQANPDDRLRPEELLELEWFETFREPQPFLAEE 630
+GSI + LEYMD GSL +V+ + E ++A + FQILWGL YL ++ VHRD+KP N+L+NS GEVK++DFG++ ELQ + T VGT +YMSPER+ Y A+D+WSLG+VL+E A R PF + IE +AQ ++ L G S EF + L+ CL NPD RL E LL W + P LA E
Sbjct: 127 EGSITIALEYMDGGSLANVLAQVGPIP--ERVLANMAFQILWGLAYLKHDKRVHRDLKPSNLLINSRGEVKVTDFGVSAELQNSIAMCGTFVGTFKYMSPERIRNLPYSYASDIWSLGLVLMECATGRYPFHEHNNCIE----------VAQTILDAEIPDLPKGFSIEFCDFLKQCLHKNPDARLPAEVLLGSPWLLQYGATSPELATE 324
BLAST of mRNA_H-canaliculatus_F_contig12704.2256.1 vs. uniprot
Match: A0A835YV97_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV97_9STRA) HSP 1 Score: 163 bits (412), Expect = 2.840e-44 Identity = 92/186 (49.46%), Postives = 120/186 (64.52%), Query Frame = 1
Query: 4 GSIHVVLEYMDRGSLGDVIHGWRGM-EYGEDLMAAITFQILWGLGYLHYEHHVHRDVKPQNILLNSNGEVKLSDFGIARELQGETDLAQTMVGTIRYMSPERLAGTGYGVAADVWSLGVVLLEMAARRLPFENAVSQIELHDRLEARSGIAQERAVDDLIKLVPGHSPEFEEVLRGCLQANPDDRL 558
G +H+VLE+MD G L DV+ E+++AAI +Q+LWGL YLHYE +HRD+KP NIL+N GEV+L+DFGIA +L+ E LA T+VGT RYMSPERL G YG AADVWSLG+V+LE+A ++PF +Q++L+ LE E V+ I S EVL CL P+ RL
Sbjct: 109 GKVHMVLEHMDLGGLHDVLQLTEKCGPMPENVIAAIFYQVLWGLSYLHYERKLHRDIKPSNILMNRKGEVRLTDFGIATDLK-EDALASTVVGTFRYMSPERLRGDEYGAAADVWSLGLVILELATGQVPFSTCNNQLDLNQLLE-------EVKVEIFIPWGQ-RSESLCEVLSACLHTEPNLRL 285
BLAST of mRNA_H-canaliculatus_F_contig12704.2256.1 vs. uniprot
Match: A0A6V1SQ10_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SQ10_HETAK) HSP 1 Score: 156 bits (394), Expect = 1.190e-42 Identity = 88/198 (44.44%), Postives = 121/198 (61.11%), Query Frame = 1
Query: 1 DGSIHVVLEYMDRGSLGDVIHGWRGMEYGEDLMAAITFQILWGLGYLHYEHHVHRDVKPQNILLNSNGEVKLSDFGIARELQGETDLAQTMVGTIRYMSPERLAGTGYGVAADVWSLGVVLLEMAARRLPFENAVSQIELHDRLEARSGIAQERAVDDLIKLVPGHSPEFEEVLRGCLQANPDDRLRPEELLELEWFE 594
+GSI + LEYM+ GSL +V+ + E +A +T+QILWGL YL +E +HRD+KP N+L+NS GEVKL+DFG++RELQ +LA T VGT RYMSPER+ Y AADVW+LG+ L+E A P+E+ + I + + + + + + D + S EF E L CLQ + DRL E LL W E
Sbjct: 125 EGSITIALEYMNGGSLANVLKQVGPVP--ESALANMTYQILWGLAYLKHEKRLHRDLKPGNLLINSKGEVKLTDFGVSRELQSSIELAGTFVGTFRYMSPERIRSRPYNYAADVWALGLCLIEAATGEYPYEDERTAIGMVETI-----VNSDIPIPDDGRF----SSEFCEFLEQCLQKDSQDRLPAEALLGAPWLE 311 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12704.2256.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12704.2256.1 >prot_H-canaliculatus_F_contig12704.2256.1 ID=prot_H-canaliculatus_F_contig12704.2256.1|Name=mRNA_H-canaliculatus_F_contig12704.2256.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=223bp MDRGSLGDVIHGWRGMEYGEDLMAAITFQILWGLGYLHYEHHVHRDVKPQback to top mRNA from alignment at H-canaliculatus_F_contig12704:5..2880- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12704.2256.1 ID=mRNA_H-canaliculatus_F_contig12704.2256.1|Name=mRNA_H-canaliculatus_F_contig12704.2256.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2876bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12704:5..2880- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12704:5..2880- >mRNA_H-canaliculatus_F_contig12704.2256.1 ID=mRNA_H-canaliculatus_F_contig12704.2256.1|Name=mRNA_H-canaliculatus_F_contig12704.2256.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1338bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12704:5..2880- (Hapterophycus canaliculatus Oshoro5f female)back to top |