mRNA_H-canaliculatus_F_contig12576.2162.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig12576.2162.1
Unique NamemRNA_H-canaliculatus_F_contig12576.2162.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12576.2162.1 vs. uniprot
Match: D8LBW9_ECTSI (Novel cap binding protein nCBP n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBW9_ECTSI)

HSP 1 Score: 415 bits (1066), Expect = 1.990e-139
Identity = 209/255 (81.96%), Postives = 220/255 (86.27%), Query Frame = 1 
Query:    1 QNRYCFWYYRKGSQKESRDPSEAYESGIKVVDSFQTVEHFWRIYNHILRADQVPNATDVHLFRDGIKPTWEDSSNSRGGQLLIRLKKGLASRAWESLVLAIIGEQFDVGNEICGAVVSVRYSEDVISVWNRSASNTEGIDKIRESLKRLLQIPSFVQVEYRRHQDNLGAATVREERAGGGFPASSTGFGPRGGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDGDRTGHA-GGGMPQETWARGPPDARDRDRD 762
            QNRYCFWYYRKG+QKES+DPSEAYESGIKVVDSFQTVEHFWRIYNHILRADQVPNATDVHLFRDGIKPTWED+SNSRGGQLLIRLKKGLASRAWESLVLAIIGEQFDVGNEICGAVVSVRYSEDVISVWNRSASNTEGI+KIR+++KRLLQIPSFVQVEYRRHQDNLGAA+VREER GGGFPA+S GFGPRGGP                             KDG+R   A GGGMPQETWARGPP+ARDRDRD
Sbjct:   97 QNRYCFWYYRKGAQKESKDPSEAYESGIKVVDSFQTVEHFWRIYNHILRADQVPNATDVHLFRDGIKPTWEDASNSRGGQLLIRLKKGLASRAWESLVLAIIGEQFDVGNEICGAVVSVRYSEDVISVWNRSASNTEGIEKIRDTVKRLLQIPSFVQVEYRRHQDNLGAASVREERGGGGFPAASPGFGPRGGPPGGAWTRHGRGGGPRGMGDRGDDHHH---KDGERAAPAAGGGMPQETWARGPPEARDRDRD 348
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BLAST of mRNA_H-canaliculatus_F_contig12576.2162.1 vs. uniprot
Match: A0A835Z354_9STRA (Putative eukaryotic initiation factor 4E n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z354_9STRA)

HSP 1 Score: 239 bits (610), Expect = 7.660e-75
Identity = 112/167 (67.07%), Postives = 140/167 (83.83%), Query Frame = 1 
Query:    1 QNRYCFWYYRKGSQKESRDPSEAYESGIKVVDSFQTVEHFWRIYNHILRADQVPNATDVHLFRDGIKPTWEDSSNSRGGQLLIRLKKGLASRAWESLVLAIIGEQFDVGNEICGAVVSVRYSEDVISVWNRSASNTEGIDKIRESLKRLLQIPSFVQVEYRRHQDNL 501
            QNRYCFWY +KG+++ +   +E YES IK + SFQTVEHFWRIYNH+ R DQVP  TD HLF+DGIKP WEDS N+RGG  ++RLKKGLASR  + L+LA+IGEQFDVGNEICGAV+SVRYSEDV+ VWNR+A N E  DKIR+ ++R+L++P+FVQ+EYRRHQD++
Sbjct:   27 QNRYCFWYKQKGNKQLT---TEDYESSIKQLASFQTVEHFWRIYNHLQRPDQVPIGTDYHLFKDGIKPAWEDSHNARGGLWMMRLKKGLASR--QELLLAMIGEQFDVGNEICGAVMSVRYSEDVVYVWNRNADNREAADKIRDQIRRILKLPNFVQLEYRRHQDSM 188
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BLAST of mRNA_H-canaliculatus_F_contig12576.2162.1 vs. uniprot
Match: A0A6G0XTE8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XTE8_9STRA)

HSP 1 Score: 228 bits (580), Expect = 5.100e-69
Identity = 98/167 (58.68%), Postives = 133/167 (79.64%), Query Frame = 1 
Query:    1 QNRYCFWYYRKGSQKESRDPSEAYESGIKVVDSFQTVEHFWRIYNHILRADQVPNATDVHLFRDGIKPTWEDSSNSRGGQLLIRLKKGLASRAWESLVLAIIGEQFDVGNEICGAVVSVRYSEDVISVWNRSASNTEGIDKIRESLKRLLQIPSFVQVEYRRHQDNL 501
            QN YCFWY +K S K + D  E+YE  IK +  F+TV+ FWR+YNH++R + +PN TD HLF+ GIKP WED++N RGG+ +IR++KG+ASR WE LVLAIIGEQFDVGNEICGAV+S+RY+ED+IS+WNR+A N E   +IR+++++LL +P FV +EY+RH  +L
Sbjct:   23 QNTYCFWYMKKNSGK-TLDDQESYEKSIKEIGEFRTVQGFWRVYNHLIRPNDLPNTTDYHLFKSGIKPMWEDAANRRGGKWMIRIRKGIASRYWEDLVLAIIGEQFDVGNEICGAVMSIRYNEDIISLWNRNADNNEACYRIRDTMRKLLNLPQFVSLEYKRHDTSL 188
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BLAST of mRNA_H-canaliculatus_F_contig12576.2162.1 vs. uniprot
Match: A0A7S2B9L2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B9L2_9STRA)

HSP 1 Score: 222 bits (566), Expect = 2.110e-67
Identity = 94/167 (56.29%), Postives = 134/167 (80.24%), Query Frame = 1 
Query:    1 QNRYCFWYYRKGSQKESRDPSEAYESGIKVVDSFQTVEHFWRIYNHILRADQVPNATDVHLFRDGIKPTWEDSSNSRGGQLLIRLKKGLASRAWESLVLAIIGEQFDVGNEICGAVVSVRYSEDVISVWNRSASNTEGIDKIRESLKRLLQIPSFVQVEYRRHQDNL 501
            QNRY FW+ ++  Q +S   ++ +++ ++ + SFQTV+HFWR+Y+H+ RA  +P  TD HLF+DGIKPTWED SN +GG+ +IRL+KGLA+R WE L+L I+GEQFDVGNE+CGAV+S+RY+ED+IS+WNR+A NTE   KIR+ ++RLL++P+F+  EY+RH D L
Sbjct:   32 QNRYVFWFMQR--QSKSAVGNDNFDANLQQIASFQTVQHFWRVYDHVQRATSLPQMTDFHLFKDGIKPTWEDPSNKQGGKWIIRLRKGLAARYWEELLLGIVGEQFDVGNEVCGAVLSIRYNEDIISIWNRNADNTEATSKIRDHMRRLLRLPAFISTEYKRHADAL 196
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BLAST of mRNA_H-canaliculatus_F_contig12576.2162.1 vs. uniprot
Match: W4FZB5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FZB5_9STRA)

HSP 1 Score: 223 bits (567), Expect = 2.910e-67
Identity = 96/167 (57.49%), Postives = 132/167 (79.04%), Query Frame = 1 
Query:    1 QNRYCFWYYRKGSQKESRDPSEAYESGIKVVDSFQTVEHFWRIYNHILRADQVPNATDVHLFRDGIKPTWEDSSNSRGGQLLIRLKKGLASRAWESLVLAIIGEQFDVGNEICGAVVSVRYSEDVISVWNRSASNTEGIDKIRESLKRLLQIPSFVQVEYRRHQDNL 501
            QN Y FWY +K S K   D  E+YE  IK +  F+TV+ FWR+YNH++R + +PN TD HLF+ GIKP WED++N RGG+ +IR++KG+ASR WE LVLAI+GEQFDVGNEICGAV+S+RY+ED+IS+WNR+A N+E   +IR+++++LL +P FV +EY+RH  +L
Sbjct:   21 QNTYTFWYMKKNSGKALED-QESYEKSIKEISEFRTVQGFWRVYNHLIRPNDLPNTTDYHLFKAGIKPMWEDTANRRGGKWMIRIRKGIASRYWEDLVLAIVGEQFDVGNEICGAVMSIRYNEDIISLWNRNADNSEACYRIRDTMRKLLNLPQFVSLEYKRHDTSL 186
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BLAST of mRNA_H-canaliculatus_F_contig12576.2162.1 vs. uniprot
Match: A0A485LDV3_9STRA (Aste57867_20004 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LDV3_9STRA)

HSP 1 Score: 223 bits (568), Expect = 3.720e-67
Identity = 96/167 (57.49%), Postives = 132/167 (79.04%), Query Frame = 1 
Query:    1 QNRYCFWYYRKGSQKESRDPSEAYESGIKVVDSFQTVEHFWRIYNHILRADQVPNATDVHLFRDGIKPTWEDSSNSRGGQLLIRLKKGLASRAWESLVLAIIGEQFDVGNEICGAVVSVRYSEDVISVWNRSASNTEGIDKIRESLKRLLQIPSFVQVEYRRHQDNL 501
            QN YCFWY +K S K     +E+YE  IK +  F+TV+ FWR+YNH++R + +PN TD HLF+ GIKP WED++N RGG+ +IR++KG+ASR WE LVLAI+GEQFDVGNEICGAV+S+RY+ED+IS+WNR+A N E   +IR+++++LL +P FV +EY+RH  +L
Sbjct:   23 QNTYCFWYMKKNSGK-----TESYEKSIKELGEFRTVQGFWRVYNHLIRPNDLPNTTDYHLFKAGIKPMWEDAANRRGGKWMIRIRKGIASRYWEDLVLAIVGEQFDVGNEICGAVMSIRYNEDIISLWNRNADNNEACYRIRDTMRKLLNLPQFVSLEYKRHDTSL 184
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BLAST of mRNA_H-canaliculatus_F_contig12576.2162.1 vs. uniprot
Match: A0A1V9Z309_9STRA (Eukaryotic initiation factor 4E n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z309_9STRA)

HSP 1 Score: 220 bits (560), Expect = 1.160e-66
Identity = 95/168 (56.55%), Postives = 133/168 (79.17%), Query Frame = 1 
Query:    1 QNRYCFWYYRKGSQ-KESRDPSEAYESGIKVVDSFQTVEHFWRIYNHILRADQVPNATDVHLFRDGIKPTWEDSSNSRGGQLLIRLKKGLASRAWESLVLAIIGEQFDVGNEICGAVVSVRYSEDVISVWNRSASNTEGIDKIRESLKRLLQIPSFVQVEYRRHQDNL 501
            QN YCFWY +K +  K + D  E+YE  IK +  F+TV+ FWR+Y+H++R + +PN TD HLF+ GIKP WED++N RGG+ +IR++KG++SR WE LVLAIIGEQFDVGNEICGAV+S+RY+ED+IS+WNR+A N E   +IR+++++LL +P FV +EY+RH  +L
Sbjct:    8 QNAYCFWYMKKNTGGKAALDDQESYEKSIKELGEFKTVQGFWRLYDHLIRPNDLPNTTDYHLFKAGIKPMWEDAANRRGGKWMIRIRKGISSRYWEDLVLAIIGEQFDVGNEICGAVMSIRYNEDIISLWNRNADNNEACYRIRDTMRKLLNLPQFVVLEYKRHDTSL 175
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BLAST of mRNA_H-canaliculatus_F_contig12576.2162.1 vs. uniprot
Match: A0A024TVS7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TVS7_9STRA)

HSP 1 Score: 220 bits (561), Expect = 1.660e-66
Identity = 96/167 (57.49%), Postives = 130/167 (77.84%), Query Frame = 1 
Query:    1 QNRYCFWYYRKGSQKESRDPSEAYESGIKVVDSFQTVEHFWRIYNHILRADQVPNATDVHLFRDGIKPTWEDSSNSRGGQLLIRLKKGLASRAWESLVLAIIGEQFDVGNEICGAVVSVRYSEDVISVWNRSASNTEGIDKIRESLKRLLQIPSFVQVEYRRHQDNL 501
            QN Y FWY +K S K   D  E+YE  IK +  F+TV+ FWR+YNH++R + +PN TD HLF+ GIKP WEDS+N RGG+ +IR++KG+ASR WE LVLAIIGEQFDVGNEICGAV+S+RY+ED+IS+WNR+A N E   +IR++++++L +P F  +EY+RH  +L
Sbjct:   20 QNTYTFWYMKKNSGKALED-QESYEKSIKEIAEFRTVQGFWRVYNHLIRPNDLPNTTDYHLFKAGIKPMWEDSANRRGGKWMIRIRKGIASRYWEDLVLAIIGEQFDVGNEICGAVMSIRYNEDIISLWNRNADNNEACYRIRDTMRKVLNLPQFASLEYKRHDTSL 185
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BLAST of mRNA_H-canaliculatus_F_contig12576.2162.1 vs. uniprot
Match: A0A7S3LL32_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LL32_9STRA)

HSP 1 Score: 219 bits (557), Expect = 7.230e-66
Identity = 96/183 (52.46%), Postives = 132/183 (72.13%), Query Frame = 1 
Query:    4 NRYCFWYYRKGSQKESRDPSEAYESGIKVVDSFQTVEHFWRIYNHILRADQVPNATDVHLFRDGIKPTWEDSSNSRGGQLLIRLKKGLASRAWESLVLAIIGEQFDVGNEICGAVVSVRYSEDVISVWNRSASNTEGIDKIRESLKRLLQIPSFVQVEYRRH----QDNLGAATVREERAGGG 540
            ++YCFWY R+G  +        YE  IK +  F TVE FW++YNH++R ++VP+ TD HLF+ GIKP WED +N  GG+ ++RL+KG+ASR WE+ +LAIIGE  DVGNEICGAV+SVRYSED+I+VWNR+A N E + KIR++L+++L++P F +VEY+RH    QD+         R GGG
Sbjct:   37 SQYCFWYMRRGGGERKPSGPTDYEKSIKQIGEFATVEGFWQLYNHLVRPNEVPHTTDYHLFKSGIKPIWEDPANKMGGKWIVRLRKGIASRYWEAALLAIIGEDIDVGNEICGAVISVRYSEDIIAVWNRNADNVEAVQKIRDALRKILRVPDFAKVEYKRHDTALQDSSSFRNTNVWRGGGG 219
[Close]
BLAST of mRNA_H-canaliculatus_F_contig12576.2162.1 vs. uniprot
Match: D0MYJ6_PHYIT (Eukaryotic initiation factor 4E, putative n=11 Tax=Phytophthora TaxID=4783 RepID=D0MYJ6_PHYIT)

HSP 1 Score: 215 bits (547), Expect = 9.800e-65
Identity = 93/167 (55.69%), Postives = 131/167 (78.44%), Query Frame = 1 
Query:    1 QNRYCFWYYRKGSQKESRDPSEAYESGIKVVDSFQTVEHFWRIYNHILRADQVPNATDVHLFRDGIKPTWEDSSNSRGGQLLIRLKKGLASRAWESLVLAIIGEQFDVGNEICGAVVSVRYSEDVISVWNRSASNTEGIDKIRESLKRLLQIPSFVQVEYRRHQDNL 501
            QN Y FWY ++ +  ++   SE+YE  IK +  F+TV+ FW+IYNH++R + +PN  D HLF+ GIKP WEDS+N RGG+ ++RL+KG+ASR WE LVLAIIGEQFDVGNEICGAV+S+RY+ED+IS+WNR+A N E   +IR++++++L +P FV +EY+RH  +L
Sbjct:   25 QNMYTFWYIKRSTGNKA--VSESYEKSIKGLGDFKTVQDFWKIYNHLVRPNDLPNTMDYHLFKTGIKPMWEDSANRRGGKWMVRLRKGIASRYWEDLVLAIIGEQFDVGNEICGAVISIRYNEDIISLWNRNADNNEACYRIRDTMRKVLNLPQFVALEYKRHDTSL 189
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12576.2162.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBW9_ECTSI1.990e-13981.96Novel cap binding protein nCBP n=2 Tax=Ectocarpus ... [more]
A0A835Z354_9STRA7.660e-7567.07Putative eukaryotic initiation factor 4E n=1 Tax=T... [more]
A0A6G0XTE8_9STRA5.100e-6958.68Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A7S2B9L2_9STRA2.110e-6756.29Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
W4FZB5_9STRA2.910e-6757.49Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A485LDV3_9STRA3.720e-6757.49Aste57867_20004 protein n=1 Tax=Aphanomyces stella... [more]
A0A1V9Z309_9STRA1.160e-6656.55Eukaryotic initiation factor 4E n=1 Tax=Achlya hyp... [more]
A0A024TVS7_9STRA1.660e-6657.49Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A7S3LL32_9STRA7.230e-6652.46Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
D0MYJ6_PHYIT9.800e-6555.69Eukaryotic initiation factor 4E, putative n=11 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12576contigH-canaliculatus_F_contig12576:1..3334 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score417.9
Seed ortholog evalue4.5e-114
Seed eggNOG ortholog2880.D8LBW9
Preferred nameEIF4E2
KEGG koko:K03259
KEGG Pathwayko01521,ko03013,ko04066,ko04150,ko04151,ko04211,ko04910,map01521,map03013,map04066,map04150,map04151,map04211,map04910
KEGG ModuleM00428
GOsGO:0000339,GO:0000340,GO:0001701,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005845,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0007275,GO:0007553,GO:0007554,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009790,GO:0009792,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010565,GO:0010566,GO:0010605,GO:0010608,GO:0010629,GO:0010817,GO:0010893,GO:0017148,GO:0019216,GO:0019218,GO:0019222,GO:0019538,GO:0019899,GO:0030371,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031625,GO:0032268,GO:0032269,GO:0032350,GO:0032352,GO:0032501,GO:0032502,GO:0032991,GO:0034248,GO:0034249,GO:0034518,GO:0034641,GO:0034645,GO:0043009,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044389,GO:0044424,GO:0044444,GO:0044464,GO:0045182,GO:0045834,GO:0045940,GO:0045966,GO:0045998,GO:0046885,GO:0046886,GO:0046889,GO:0046890,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048580,GO:0048582,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050810,GO:0051094,GO:0051171,GO:0051172,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0060255,GO:0062012,GO:0062013,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0090030,GO:0090031,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000026,GO:2000112,GO:2000113
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG5053@1,KOG1669@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03012,ko03019
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionnovel cap binding protein nCBP
Ec32 orthologEc-20_003570.1
Exons5
Model size1026
Cds size1026
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12576.2162.1prot_H-canaliculatus_F_contig12576.2162.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig12576 1..3334 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928972.2438548-CDS-H-canaliculatus_F_contig12576:0..3541622928972.2438548-CDS-H-canaliculatus_F_contig12576:0..354Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12576 1..354 -
1696845635.4614956-CDS-H-canaliculatus_F_contig12576:0..3541696845635.4614956-CDS-H-canaliculatus_F_contig12576:0..354Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12576 1..354 -
1622928972.2603629-CDS-H-canaliculatus_F_contig12576:1254..14551622928972.2603629-CDS-H-canaliculatus_F_contig12576:1254..1455Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12576 1255..1455 -
1696845635.4743037-CDS-H-canaliculatus_F_contig12576:1254..14551696845635.4743037-CDS-H-canaliculatus_F_contig12576:1254..1455Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12576 1255..1455 -
1622928972.273123-CDS-H-canaliculatus_F_contig12576:2009..22521622928972.273123-CDS-H-canaliculatus_F_contig12576:2009..2252Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12576 2010..2252 -
1696845635.4874806-CDS-H-canaliculatus_F_contig12576:2009..22521696845635.4874806-CDS-H-canaliculatus_F_contig12576:2009..2252Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12576 2010..2252 -
1622928972.2905672-CDS-H-canaliculatus_F_contig12576:2930..30021622928972.2905672-CDS-H-canaliculatus_F_contig12576:2930..3002Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12576 2931..3002 -
1696845635.5007098-CDS-H-canaliculatus_F_contig12576:2930..30021696845635.5007098-CDS-H-canaliculatus_F_contig12576:2930..3002Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12576 2931..3002 -
1622928972.30392-CDS-H-canaliculatus_F_contig12576:3178..33341622928972.30392-CDS-H-canaliculatus_F_contig12576:3178..3334Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12576 3179..3334 -
1696845635.510758-CDS-H-canaliculatus_F_contig12576:3178..33341696845635.510758-CDS-H-canaliculatus_F_contig12576:3178..3334Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12576 3179..3334 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig12576.2162.1

>prot_H-canaliculatus_F_contig12576.2162.1 ID=prot_H-canaliculatus_F_contig12576.2162.1|Name=mRNA_H-canaliculatus_F_contig12576.2162.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=342bp
QNRYCFWYYRKGSQKESRDPSEAYESGIKVVDSFQTVEHFWRIYNHILRA
DQVPNATDVHLFRDGIKPTWEDSSNSRGGQLLIRLKKGLASRAWESLVLA
IIGEQFDVGNEICGAVVSVRYSEDVISVWNRSASNTEGIDKIRESLKRLL
QIPSFVQVEYRRHQDNLGAATVREERAGGGFPASSTGFGPRGGPPGGGAG
AWTRHRGGGPRGMGGGGGDDHHHKDGDRTGHAGGGMPQETWARGPPDARD
RDRDGGGGGGGGGFRGGGGGGGMGGFRPPPGRWAERRAAAEEGAGGAGAG
GGGNKDYGGGGGERERGDGGGGKGFAPRGDRGDREKDLEKWG
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mRNA from alignment at H-canaliculatus_F_contig12576:1..3334-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig12576.2162.1 ID=mRNA_H-canaliculatus_F_contig12576.2162.1|Name=mRNA_H-canaliculatus_F_contig12576.2162.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3334bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12576:1..3334- (Hapterophycus canaliculatus Oshoro5f female)
CAGAATCGGTACTGCTTCTGGTACTACCGCAAGGGGTCGCAGAAGGAGAG
CAGGGACCCCAGCGAGGCGTACGAGAGTGGGATCAAGGTGGTGGACAGCT
TCCAGACCGTCGAGCACTTCTGGCGCATCTACAACCATATCCTCCGCGCC
GATCAGGTTTGAGAAAGAGGCAACGACCGCGGTCGTGATGGAACGACTCA
CGCATGAGTCCTGAGTCCTACAGAGAGAGGGTGTCGGATGACACGTATGT
TAGCGTCTTCCTTTCCCCATTGCTTGGTTTTCCCACCGGATCGTTGGGGT
GACGACAAGCGCACTGCCGCGCTTTATTCCAGGTGCCGAACGCTACGGAC
GTCCACCTGTTCAGAGATGGTATCAAGCCCACGTGGGAAGACTCCTCCAA
TTCGGTGAGTTGTTCGTTCGTTCGTGCACGTGTTTTTCCCAAGGTTTGCG
GCTGCAACGACGCCATAAAGCTGGCAGCGGCGACAACATGGCCAAAGGCA
GCAACGTCGTCGCACGGCTCGGTCGGCTTTGATTGGTTCACGTCGAGCTA
AGAGACAGAACGGGATTTTAACAGGCGGGGACCCGCCGCATTTCGATCGA
AACTCTTGCGAGGGGATTTTTCAAACAACCACACTCCGATAATCTCCTGG
ACTTGCTTGATAATGCAGGGTTCAGATTCTCTACTACCGCCATTCGGCAT
TTTTTTCGTGCGTTGTTTCTTCGTTTCGAAGTCATCTTGACAACGTAGCC
TTCTGCGCCGCAAGACCACACGTTCGCGTGTGCTTGCAGGCGGTGCGGTC
AATCAGCTCACAATCTTAACGCACAGCAGTGGTATACCAGCCCTGAGACA
GAGAAGGACTATGATACGTAAACAAACAACGGCTGGGTTTAAGCAGTCTG
CCCTTCTGTGGCTTCCGTCTTCGTATTTTGGACCAGGGGGCTCAGTGCAT
ACTTGTCTTTAGGGATGCAGCCAGTGCTGATGACGGGCGTCCAAAAACAG
GCACGACGGTTTCTCGACCCAACCTCGCTGGCATCCAGGTTTCTCAATTT
TTCGCGTTCCACACTAACCCTCCGCCTTACAGAGAGGCGGCCAGCTGCTG
ATACGCCTCAAGAAGGGCCTCGCAAGCCGCGCGTGGGAGAGCCTGGTGCT
TGCCATCATCGGGGAGCAGTTCGACGTCGGCAACGAGATATGCGGGGCGG
TGGTGTCCGTCCGTTACAGCGAGGACGTGATCTCGGTGTGGAACAGGTCG
GCGTCCAATACGGAGGGCATCGACAAGATCCGCGAGTCTCTCAAACGCCT
CCTGCAGATCCCGTCCTTCGTTCAGGTGTGGGTCCGGATGCGGGGGGATG
CGGTGGGTTGCCCGTTATGATCCTATTTCTCCACGTCATTCAGCGTCTGT
CCCCTGTGGCGACGATTTCGAAAGGTGCGGTGTTCGTCGCAGAGAGCAAC
ATGCCTCTGTGCGTTGATGAAGGTTTTTGATGGACCATTTTTCTTTTCCA
TTTTGAACTCCAACTTTGTGAACCCTCTGGTCAAGTTGCTGAGCACTTCA
TCATCGATGGTCTACCCCACTTTCGTCCTCTTCCGCCGAAATCAAAGTAA
CGAAGGGCACTTGTTTTTCCCAATTTTATCCCCTCCGGACGAGACGCGAC
CTAACTTCCCTACGCCGACGAACCCCCTCCCCACCCCCCTTCCCCTCAAC
CCGTCCGGCAAAAAAAACCCCGACAGAACCAAGCGTGCTCCATTCCCGCT
TTGCGCTGCAATGGTGCGAGGCTCACGGAACCATGACTTCTGGACCGCGT
GCATCGATATTGCGTACCCCCCGCCGCCATGTCTACCCCCGTAAACCTCA
CACCCGGGATGAATTTCTTGCCGCCGCAGGTTGAGTATAGGCGCCACCAG
GACAATCTCGGAGCGGCCACTGTGCGAGAGGAACGAGCGGGCGGGGGTTT
CCCAGCGTCGTCAACTGGCTTCGGTCCTCGAGGCGGTCCCCCCGGCGGGG
GCGCCGGCGCCTGGACACGCCACAGGGGTGGCGGCCCGCGCGGAATGGGA
GGGGGGGGAGGCGATGATCACCACCACAAGGTGAGGGGGGCGGGGGCGGC
TAAGGTTCGCGATATTGGAGTGCCGGTGGTGGCGCTTGCGGGGGCTGCGG
TTAGGATGTTGTTGTGATCTTGTGTGTGTGGTTGATGAAGCGCCGGCGGG
TCGGCGATGCTTTGCCGAGATTGGTCGGCCTTGCGGACGATACTGAACGA
CAGCAGTCCGTGATGATGCTGCTGCTGCTGCTGCTGCTGCTGCCGCTGTT
GCTGTTGCTGTTGCTCCATCGGTGCCACTGAAAGCAATCAGCGGCATGTT
GCTGTCCAGCCCCCTCTCAAATATTCTCGTGAGTGTACGTGCGCGGGTAG
CTTTGCCGAAGTCACAATCAGTCAAGTGCATTCCAGTTTCGTCGTGCAGC
TGGGATAAATACGAAGAGTACTCCGTATTATCATTTCTCTTTTAGTTGTC
TAGGCTCGTGCATGTCGACAAAGAACACAGTTATCCCGTGTTCCGACTCG
CTTGCCAGGTGAAATGCCAGGAAGGCAGACAGGCGACCCTTAGCGATTCG
CCTTGCGCCAACGTCTTCTCTCTCGACGCTGAAACGGGGGGAGGCAGGAG
AAAAAGAAGGCGCACACACAATCGTGCGCAAGGCACCGATTGGTCGAAAT
CAACCGTCCGGCCGCTTGTGTAAGAACACCTTGCGCACTCGTAAAGTGCC
GCCGTCTGTTCTTGGTGCCTTCATCGTAGCCTCACTCAATCCCTACGCGA
CAAAATCCTCCCCACCCCCACCCCCGCCCATAAGAACGACAGTTAAAACG
TCAGCACAAAAGATGGACATCATACATGAAGATAGCCGTAAGCACGAACA
CTTGAAAATCAACATCGCTACGTGAACACCGGCACCACTAACAACAACAA
CAACAACAACAACAACGACAACGACAACAGGACGGAGACCGCACCGGACA
CGCCGGCGGCGGCATGCCCCAAGAAACCTGGGCCAGAGGCCCGCCCGATG
CGAGGGACCGAGACCGCGATGGCGGCGGCGGAGGGGGCGGCGGGGGGTTC
CGGGGAGGAGGAGGGGGAGGGGGGATGGGTGGTTTCCGTCCCCCGCCGGG
CAGGTGGGCGGAGCGGCGGGCGGCGGCGGAAGAGGGCGCGGGCGGCGCAG
GAGCAGGAGGAGGGGGGAACAAGGACTACGGAGGGGGCGGAGGGGAGAGG
GAGAGGGGGGACGGCGGAGGGGGCAAGGGCTTCGCGCCTCGGGGGGACCG
TGGGGACCGCGAGAAGGATCTGGAGAAGTGGGGG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12576:1..3334-

>mRNA_H-canaliculatus_F_contig12576.2162.1 ID=mRNA_H-canaliculatus_F_contig12576.2162.1|Name=mRNA_H-canaliculatus_F_contig12576.2162.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2052bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12576:1..3334- (Hapterophycus canaliculatus Oshoro5f female)
CAGAATCGGTACTGCTTCTGGTACTACCGCAAGGGGTCGCAGAAGGAGAG
CAGGGACCCCAGCGAGGCGTACGAGAGTGGGATCAAGGTGGTGGACAGCT
TCCAGACCGTCGAGCACTTCTGGCGCATCTACAACCATATCCTCCGCGCC
GATCAGCAGAATCGGTACTGCTTCTGGTACTACCGCAAGGGGTCGCAGAA
GGAGAGCAGGGACCCCAGCGAGGCGTACGAGAGTGGGATCAAGGTGGTGG
ACAGCTTCCAGACCGTCGAGCACTTCTGGCGCATCTACAACCATATCCTC
CGCGCCGATCAGGTGCCGAACGCTACGGACGTCCACCTGTTCAGAGATGG
TATCAAGCCCACGTGGGAAGACTCCTCCAATTCGGTGCCGAACGCTACGG
ACGTCCACCTGTTCAGAGATGGTATCAAGCCCACGTGGGAAGACTCCTCC
AATTCGAGAGGCGGCCAGCTGCTGATACGCCTCAAGAAGGGCCTCGCAAG
CCGCGCGTGGGAGAGCCTGGTGCTTGCCATCATCGGGGAGCAGTTCGACG
TCGGCAACGAGATATGCGGGGCGGTGGTGTCCGTCCGTTACAGCGAGGAC
GTGATCTCGGTGTGGAACAGGTCGGCGTCCAATACGGAGGGCATCGACAA
GATCCGCGAGTCTCTCAAACGCCTCCTGCAGATCCCGTCCTTCGTTCAGA
GAGGCGGCCAGCTGCTGATACGCCTCAAGAAGGGCCTCGCAAGCCGCGCG
TGGGAGAGCCTGGTGCTTGCCATCATCGGGGAGCAGTTCGACGTCGGCAA
CGAGATATGCGGGGCGGTGGTGTCCGTCCGTTACAGCGAGGACGTGATCT
CGGTGTGGAACAGGTCGGCGTCCAATACGGAGGGCATCGACAAGATCCGC
GAGTCTCTCAAACGCCTCCTGCAGATCCCGTCCTTCGTTCAGGTTGAGTA
TAGGCGCCACCAGGACAATCTCGGAGCGGCCACTGTGCGAGAGGAACGAG
CGGGCGGGGGTTTCCCAGCGTCGTCAACTGGCTTCGGTCCTCGAGGCGGT
CCCCCCGGCGGGGGCGCCGGCGCCTGGACACGCCACAGGGGTGGCGGCCC
GCGCGGAATGGGAGGGGGGGGAGGCGATGATCACCACCACAAGGTTGAGT
ATAGGCGCCACCAGGACAATCTCGGAGCGGCCACTGTGCGAGAGGAACGA
GCGGGCGGGGGTTTCCCAGCGTCGTCAACTGGCTTCGGTCCTCGAGGCGG
TCCCCCCGGCGGGGGCGCCGGCGCCTGGACACGCCACAGGGGTGGCGGCC
CGCGCGGAATGGGAGGGGGGGGAGGCGATGATCACCACCACAAGGACGGA
GACCGCACCGGACACGCCGGCGGCGGCATGCCCCAAGAAACCTGGGCCAG
AGGCCCGCCCGATGCGAGGGACCGAGACCGCGATGGCGGCGGCGGAGGGG
GCGGCGGGGGGTTCCGGGGAGGAGGAGGGGGAGGGGGGATGGGTGGTTTC
CGTCCCCCGCCGGGCAGGTGGGCGGAGCGGCGGGCGGCGGCGGAAGAGGG
CGCGGGCGGCGCAGGAGCAGGAGGAGGGGGGAACAAGGACTACGGAGGGG
GCGGAGGGGAGAGGGAGAGGGGGGACGGCGGAGGGGGCAAGGGCTTCGCG
CCTCGGGGGGACCGTGGGGACCGCGAGAAGGATCTGGAGAAGTGGGGGGA
CGGAGACCGCACCGGACACGCCGGCGGCGGCATGCCCCAAGAAACCTGGG
CCAGAGGCCCGCCCGATGCGAGGGACCGAGACCGCGATGGCGGCGGCGGA
GGGGGCGGCGGGGGGTTCCGGGGAGGAGGAGGGGGAGGGGGGATGGGTGG
TTTCCGTCCCCCGCCGGGCAGGTGGGCGGAGCGGCGGGCGGCGGCGGAAG
AGGGCGCGGGCGGCGCAGGAGCAGGAGGAGGGGGGAACAAGGACTACGGA
GGGGGCGGAGGGGAGAGGGAGAGGGGGGACGGCGGAGGGGGCAAGGGCTT
CGCGCCTCGGGGGGACCGTGGGGACCGCGAGAAGGATCTGGAGAAGTGGG
GG
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