mRNA_H-canaliculatus_F_contig1222.1907.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1222.1907.1 vs. uniprot
Match: D7FXK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXK8_ECTSI) HSP 1 Score: 204 bits (519), Expect = 5.440e-56 Identity = 91/109 (83.49%), Postives = 99/109 (90.83%), Query Frame = 2
Query: 650 RYAKQWVEAYPSARSYACPGLAEREPDVGFTREVGASPDDESPPEWKGEIQACLMDCETNPFTGKPFFNEVVFFHRPTKTFMASDLYWNYPRKDIPFGTKVWKWGMDKV 976
+YAKQWVEAYPSA SYACPGLAER+P+VGFTREVGAS +DES PEW EI AC MDCETNPFTGKPFFNEVVFFHRPTKT + SDLYWNYPRK++P GT+VWKWGMDKV
Sbjct: 96 KYAKQWVEAYPSAVSYACPGLAERQPEVGFTREVGASIEDESLPEWGDEILACFMDCETNPFTGKPFFNEVVFFHRPTKTLITSDLYWNYPRKEVPLGTRVWKWGMDKV 204
BLAST of mRNA_H-canaliculatus_F_contig1222.1907.1 vs. uniprot
Match: A0A8J9RQ74_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RQ74_9CHLO) HSP 1 Score: 143 bits (360), Expect = 2.390e-34 Identity = 65/109 (59.63%), Postives = 80/109 (73.39%), Query Frame = 2
Query: 650 RYAKQWVEAYPSARSYACPGLAEREPDVGFTREVGASPDDESPPEWKGEIQACLMDCETNPFTGKPFFNEVVFFHRPTKTFMASDLYWNYPRKDIPFGTKVWKWGMDKV 976
+YAKQW+E YP ARSYACPGL E+EP V +T E+G + PPEW GE+Q + E NPF GKPFFNEVVFF +P K + SDL+WNYP + P GTK+WK+GMD+V
Sbjct: 114 KYAKQWIERYPGARSYACPGLKEKEPQVPYTTELGGGGGE--PPEWLGEVQTTCLTYERNPFNGKPFFNEVVFFFKPEKLLITSDLFWNYPNQ-APGGTKLWKFGMDRV 219
BLAST of mRNA_H-canaliculatus_F_contig1222.1907.1 vs. uniprot
Match: A0A6U5BPS5_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U5BPS5_HEMAN) HSP 1 Score: 141 bits (355), Expect = 5.080e-33 Identity = 60/111 (54.05%), Postives = 81/111 (72.97%), Query Frame = 2
Query: 650 RYAKQWVEAYPSARSYACPGLAEREPDVGFTREVGASPDDESPPEWKGEIQACLMDCETNPFTGKPFFNEVVFFHRPTKTFMASDLYWNYPRKDIPFGTKVWKWGMDKVMG 982
++AKQW EA+P+A + CPG+ E+ PDVG+ EV AS D P W EI+A DCE NPFTGKPFFNEV F H ++T + +D +WNYP++++PFGT+ WK+GMD+V G
Sbjct: 156 KFAKQWFEAFPNAAACGCPGIKEKYPDVGYQTEVPAS-DGSMPQGWPAEIEAIFFDCEKNPFTGKPFFNEVNFVHTASRTLITTDTFWNYPKREVPFGTRAWKFGMDQVYG 265
BLAST of mRNA_H-canaliculatus_F_contig1222.1907.1 vs. uniprot
Match: A0A7S0Y1A6_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y1A6_HEMAN) HSP 1 Score: 137 bits (346), Expect = 3.330e-32 Identity = 58/108 (53.70%), Postives = 79/108 (73.15%), Query Frame = 2
Query: 650 RYAKQWVEAYPSARSYACPGLAEREPDVGFTREVGASPDDESPPEWKGEIQACLMDCETNPFTGKPFFNEVVFFHRPTKTFMASDLYWNYPRKDIPFGTKVWKWGMDK 973
++AKQW EA+P+A + CPG+ E+ PDVG+ EV AS D P W EI+A DCE NPFTGKPFFNEV F H ++T + +D +WNYP++++PFGT+ WK+GMD+
Sbjct: 176 KFAKQWFEAFPNAAACGCPGIKEKYPDVGYQTEVPAS-DGSMPQGWPAEIEAIFFDCEKNPFTGKPFFNEVNFVHTASRTLITTDTFWNYPKREVPFGTRAWKFGMDQ 282
BLAST of mRNA_H-canaliculatus_F_contig1222.1907.1 vs. uniprot
Match: A0A1Y1IMY2_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IMY2_KLENI) HSP 1 Score: 135 bits (340), Expect = 4.150e-31 Identity = 59/108 (54.63%), Postives = 76/108 (70.37%), Query Frame = 2
Query: 653 YAKQWVEAYPSARSYACPGLAEREPDVGFTREVGASPDDESPPEWKGEIQACLMDCETNPFTGKPFFNEVVFFHRPTKTFMASDLYWNYPRKDIPFGTKVWKWGMDKV 976
+A+QW+EAYP A++YACPGL ++PDV + E+GA+ +P EW GE DCE NPFT KPFFNEVV+ H P+ +DL+WNYP K +P GT +WK GMDKV
Sbjct: 172 FAQQWIEAYPDAKAYACPGLRAKKPDVRYAAEIGAN-GSATPAEWGGEFSFAFFDCEHNPFTLKPFFNEVVYVHHPSGVLFVTDLFWNYPGKAVPPGTFIWKQGMDKV 278
BLAST of mRNA_H-canaliculatus_F_contig1222.1907.1 vs. uniprot
Match: A0A5J4YDZ7_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YDZ7_9CHLO) HSP 1 Score: 127 bits (320), Expect = 3.000e-28 Identity = 55/109 (50.46%), Postives = 78/109 (71.56%), Query Frame = 2
Query: 650 RYAKQWVEAYPSARSYACPGLAEREPDVGFTREVGASPDDESPPEWKGEIQACLMDCETNPFTGKPFFNEVVFFHRPTKTFMASDLYWNYPRKDIPFGTKVWKWGMDKV 976
++A+QW++AYPSA+SY CPG ++ PD+ +++EVG D++PPEW GEI+ + E P PFFNEVVF H+P+ T +A+DL WNYP P GT+ WK+GMD+V
Sbjct: 176 KFAQQWIDAYPSAKSYVCPGGLKKYPDIKYSQEVGEG--DKAPPEWLGEIEPTFLSYEAVPLLNFPFFNEVVFVHKPSGTLIATDLIWNYPGSGTPKGTQAWKFGMDRV 282
BLAST of mRNA_H-canaliculatus_F_contig1222.1907.1 vs. uniprot
Match: A0A7S4C8N9_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4C8N9_9EUGL) HSP 1 Score: 130 bits (328), Expect = 8.390e-28 Identity = 58/109 (53.21%), Postives = 73/109 (66.97%), Query Frame = 2
Query: 650 RYAKQWVEAYPSARSYACPGLAEREPDVGFTREVGASPDDESPPEWKGEIQACLMDCETNPFTGKPFFNEVVFFHRPTKTFMASDLYWNYPRKDIPFGTKVWKWGMDKV 976
+YA+QW++AYP A +Y CPG E+ P + F EVG + P W ++ MDCE NPFT PFFNEVVF H PTKT + +DL+WNYP D P GT+ WKWGMD+V
Sbjct: 253 KYAQQWIDAYPDAIAYGCPGAKEKFPQISFQAEVGVG--NAVPEAWASDLLVTYMDCEHNPFTRSPFFNEVVFVHLPTKTLIVTDLFWNYPI-DAPAGTRAWKWGMDEV 358
BLAST of mRNA_H-canaliculatus_F_contig1222.1907.1 vs. uniprot
Match: A0A0G4F7M5_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4F7M5_9ALVE) HSP 1 Score: 121 bits (303), Expect = 3.280e-26 Identity = 56/113 (49.56%), Postives = 76/113 (67.26%), Query Frame = 2
Query: 650 RYAKQWVEAYPSARSYACPGLAEREPDVGFTREVGASPD--DESPPEWKGEIQACLMDCETNPFTGKPFFNEVVFFHRPTKTFMASDLYWNYPRKD--IPFGTKVWKWGMDKV 976
++A W +PS+ + CPGLAEREP VGF + V + + +P EW GE + C +D E NPFT +PFFNEV+FFH+P+KT + SD WNYP + +P T+VWK GMDK+
Sbjct: 162 KFAGDWKREFPSSVASGCPGLAEREPGVGFDQTVPVVGEGGEGAPSEWLGEFEVCFLDFEHNPFTRRPFFNEVIFFHKPSKTLIVSDALWNYPGQPERVPLLTRVWKLGMDKL 274
BLAST of mRNA_H-canaliculatus_F_contig1222.1907.1 vs. uniprot
Match: A0A8J5XJ41_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XJ41_DIALT) HSP 1 Score: 118 bits (296), Expect = 9.000e-26 Identity = 56/111 (50.45%), Postives = 75/111 (67.57%), Query Frame = 2
Query: 650 RYAKQWVEAYPSARSYACPGLAEREPDVGFTREVGASPDDESPPEWKGEIQACLMDCETNPFTG-KPFFNEVVFFHRPTKTFMASDLYWNYPR-KDIPFGTKVWKWGMDKV 976
++A+ W+EAYP A SYACPGL ER+P VG+TR VG P D+ P ++AC + E P G +PFF+EVVFFH P++ +DL+WNYP D+P T+ WKW MD+V
Sbjct: 122 KWARDWIEAYPGATSYACPGLRERKPHVGWTRTVGL-PGDQHP------LEACWVSAERVPLIGSEPFFSEVVFFHAPSRVLFVTDLFWNYPAGADVPASTRAWKWAMDRV 225
BLAST of mRNA_H-canaliculatus_F_contig1222.1907.1 vs. uniprot
Match: A0A0G4EB62_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EB62_VITBC) HSP 1 Score: 119 bits (297), Expect = 1.150e-25 Identity = 57/113 (50.44%), Postives = 71/113 (62.83%), Query Frame = 2
Query: 650 RYAKQWVEAYPSARSYACPGLAEREPDVGFTREVGASPDDESPPEWKGEIQACLMDCETNPFTGKPFFNEVVFFHRPTKTFMASDLYWNYPR----KDIPFGTKVWKWGMDKV 976
+Y W +AYP A +Y CPGL REP +EV P P W E + C +DCE NPFT K FFNEVVFFH+P+KT + SD YWNYP + IP T++WK+GMD+V
Sbjct: 143 KYGPLWGQAYPDAVTYGCPGLMAREP--WCMQEVANDP----PDSWLDEFECCFIDCEQNPFTRKSFFNEVVFFHKPSKTLITSDFYWNYPSTSPSRPIPQSTRLWKFGMDRV 249 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1222.1907.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1222.1907.1 >prot_H-canaliculatus_F_contig1222.1907.1 ID=prot_H-canaliculatus_F_contig1222.1907.1|Name=mRNA_H-canaliculatus_F_contig1222.1907.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=140bp MKKSRRHQRKYPPLRQIVSTRWGCVEVLTVRFQYDGGEVSLSRSNPSTLLback to top mRNA from alignment at H-canaliculatus_F_contig1222:7963..11733- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1222.1907.1 ID=mRNA_H-canaliculatus_F_contig1222.1907.1|Name=mRNA_H-canaliculatus_F_contig1222.1907.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3771bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1222:7963..11733- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1222:7963..11733- >mRNA_H-canaliculatus_F_contig1222.1907.1 ID=mRNA_H-canaliculatus_F_contig1222.1907.1|Name=mRNA_H-canaliculatus_F_contig1222.1907.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=840bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1222:7963..11733- (Hapterophycus canaliculatus Oshoro5f female)back to top |