mRNA_H-canaliculatus_F_contig11931.1696.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig11931.1696.1 vs. uniprot
Match: D7G5D8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D8_ECTSI) HSP 1 Score: 258 bits (659), Expect = 1.560e-79 Identity = 196/247 (79.35%), Postives = 204/247 (82.59%), Query Frame = 1
Query: 277 LWPYTADLVDGILAGNRTSLSRAITLVESHRLDHRRQAELLLDRVLSVRQEATLAPVPPPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSAGAVLGDPLRLGMRLGIAGPPGAGKSSFIEVLGKSLTTAGNRVAVISIDPSSIRTGGSILGDKTRMHELSRDPRRVGEAFVRGCPARGVLGGISRYTHDVVLLCQVAGYDPVIVETVGLGQNEV 1017
LWP TADLVDGILAG+R SLSRAITLVESHRLDHRRQAELLLDR+LS R +A P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G A G +LGMRLGIAGPPGAGKSSFIEVLGK LT+AGNRVAVISIDPSS+RTGGSILGDKTRM ELSRDP AFVRGCPARGVLGG+SRYTH+VVLLCQVAGYDPVIVETVGLGQNEV
Sbjct: 123 LWPSTADLVDGILAGSRASLSRAITLVESHRLDHRRQAELLLDRLLSARHQAG---APXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAEGLASSGRRDCSSGRLVAATGGFPKLGMRLGIAGPPGAGKSSFIEVLGKRLTSAGNRVAVISIDPSSLRTGGSILGDKTRMDELSRDP----SAFVRGCPARGVLGGLSRYTHEVVLLCQVAGYDPVIVETVGLGQNEV 362
BLAST of mRNA_H-canaliculatus_F_contig11931.1696.1 vs. uniprot
Match: W2NS63_PHYPR (LAO/AO transport system ATPase, variant 6 n=5 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NS63_PHYPR) HSP 1 Score: 171 bits (433), Expect = 3.350e-47 Identity = 109/260 (41.92%), Postives = 138/260 (53.08%), Query Frame = 1
Query: 262 ASARRLWPYTADLVDGILAGNRTSLSRAITLVESHRLDHRRQAELLLDRVLSVRQEATLAPVPPPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSAGAVLGDPLRLGMRLGIAGPPGAGKSSFIEVLGKSLTTAGNRVAVISIDPSSIRTGGSILGDKTRMHELSRDPRRVGEAFVRGCPARGVLGGISRYTHDVVLLCQVAGYDPVIVETVGLGQNEVPIFVCVDI 1041
A R + P T LV+G+L GNRT+LSR+ITLVES QAELLLD VL+ R+ A V PP RLGIAGPPGAGKS+FIE LG LT G++VAV++IDPSS R+GGSILGDKTRM +LS DP AFVR P+RG LGG++++T+++VLLC+ GYD ++VE+VGLGQ+E+ I VD+
Sbjct: 29 APTREMRPMTQRLVEGVLQGNRTALSRSITLVESTLKSDEEQAELLLDSVLTQRRSLRPAHVDPPELTS-----------------------------------------------------------------------FRLGIAGPPGAGKSTFIETLGLFLTAQGHKVAVLAIDPSSSRSGGSILGDKTRMEKLSNDPN----AFVRPSPSRGTLGGVAQHTNEIVLLCEAGGYDIILVESVGLGQSEIVIDDTVDM 213
BLAST of mRNA_H-canaliculatus_F_contig11931.1696.1 vs. uniprot
Match: W2HAL9_PHYPR (LAO/AO transport system ATPase, variant 4 n=5 Tax=Phytophthora parasitica TaxID=4792 RepID=W2HAL9_PHYPR) HSP 1 Score: 171 bits (433), Expect = 3.760e-47 Identity = 109/260 (41.92%), Postives = 138/260 (53.08%), Query Frame = 1
Query: 262 ASARRLWPYTADLVDGILAGNRTSLSRAITLVESHRLDHRRQAELLLDRVLSVRQEATLAPVPPPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSAGAVLGDPLRLGMRLGIAGPPGAGKSSFIEVLGKSLTTAGNRVAVISIDPSSIRTGGSILGDKTRMHELSRDPRRVGEAFVRGCPARGVLGGISRYTHDVVLLCQVAGYDPVIVETVGLGQNEVPIFVCVDI 1041
A R + P T LV+G+L GNRT+LSR+ITLVES QAELLLD VL+ R+ A V PP RLGIAGPPGAGKS+FIE LG LT G++VAV++IDPSS R+GGSILGDKTRM +LS DP AFVR P+RG LGG++++T+++VLLC+ GYD ++VE+VGLGQ+E+ I VD+
Sbjct: 29 APTREMRPMTQRLVEGVLQGNRTALSRSITLVESTLKSDEEQAELLLDSVLTQRRSLRPAHVDPPELTS-----------------------------------------------------------------------FRLGIAGPPGAGKSTFIETLGLFLTAQGHKVAVLAIDPSSSRSGGSILGDKTRMEKLSNDPN----AFVRPSPSRGTLGGVAQHTNEIVLLCEAGGYDIILVESVGLGQSEIVIDDTVDM 213
BLAST of mRNA_H-canaliculatus_F_contig11931.1696.1 vs. uniprot
Match: W2LL69_PHYPR (LAO/AO transport system ATPase, variant 3 n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2LL69_PHYPR) HSP 1 Score: 171 bits (433), Expect = 1.770e-46 Identity = 109/260 (41.92%), Postives = 138/260 (53.08%), Query Frame = 1
Query: 262 ASARRLWPYTADLVDGILAGNRTSLSRAITLVESHRLDHRRQAELLLDRVLSVRQEATLAPVPPPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSAGAVLGDPLRLGMRLGIAGPPGAGKSSFIEVLGKSLTTAGNRVAVISIDPSSIRTGGSILGDKTRMHELSRDPRRVGEAFVRGCPARGVLGGISRYTHDVVLLCQVAGYDPVIVETVGLGQNEVPIFVCVDI 1041
A R + P T LV+G+L GNRT+LSR+ITLVES QAELLLD VL+ R+ A V PP RLGIAGPPGAGKS+FIE LG LT G++VAV++IDPSS R+GGSILGDKTRM +LS DP AFVR P+RG LGG++++T+++VLLC+ GYD ++VE+VGLGQ+E+ I VD+
Sbjct: 29 APTREMRPMTQRLVEGVLQGNRTALSRSITLVESTLKSDEEQAELLLDSVLTQRRSLRPAHVDPPELTS-----------------------------------------------------------------------FRLGIAGPPGAGKSTFIETLGLFLTAQGHKVAVLAIDPSSSRSGGSILGDKTRMEKLSNDPN----AFVRPSPSRGTLGGVAQHTNEIVLLCEAGGYDIILVESVGLGQSEIVIDDTVDM 213
BLAST of mRNA_H-canaliculatus_F_contig11931.1696.1 vs. uniprot
Match: A0A5D6Y0Y2_9STRA (AAA domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0Y2_9STRA) HSP 1 Score: 172 bits (435), Expect = 3.590e-46 Identity = 112/260 (43.08%), Postives = 142/260 (54.62%), Query Frame = 1
Query: 262 ASARRLWPYTADLVDGILAGNRTSLSRAITLVESHRLDHRRQAELLLDRVLSVRQEATLAPVPPPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSAGAVLGDPLRLGMRLGIAGPPGAGKSSFIEVLGKSLTTAGNRVAVISIDPSSIRTGGSILGDKTRMHELSRDPRRVGEAFVRGCPARGVLGGISRYTHDVVLLCQVAGYDPVIVETVGLGQNEVPIFVCVDI 1041
A A+++ P T LVDG+LAGNRT+LSR+ITLVES +QAELLLD VL+ R+EA G P R+GIAGPPGAGKS+FIE LG+ LT ++VAV++IDPSS RTGGSILGDKTRM LS DP AFVR P+RG LGG++++T+D+VLLC+ AGYD ++VE+VGLGQ+E+ I VD+
Sbjct: 29 AGAQQMRPETQRLVDGVLAGNRTALSRSITLVESSLKSDEQQAELLLDAVLTHRREANA--------------------------------------------------------------------KEKEFRGLPT---FRVGIAGPPGAGKSTFIETLGQFLTAKNHKVAVLAIDPSSSRTGGSILGDKTRMTYLSNDPH----AFVRPSPSRGTLGGVAQHTNDIVLLCEAAGYDIILVESVGLGQSEIVIDDTVDM 213
BLAST of mRNA_H-canaliculatus_F_contig11931.1696.1 vs. uniprot
Match: H3GW23_PHYRM (AAA domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=H3GW23_PHYRM) HSP 1 Score: 167 bits (424), Expect = 1.150e-44 Identity = 109/259 (42.08%), Postives = 137/259 (52.90%), Query Frame = 1
Query: 265 SARRLWPYTADLVDGILAGNRTSLSRAITLVESHRLDHRRQAELLLDRVLSVRQEATLAPVPPPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSAGAVLGDPLRLGMRLGIAGPPGAGKSSFIEVLGKSLTTAGNRVAVISIDPSSIRTGGSILGDKTRMHELSRDPRRVGEAFVRGCPARGVLGGISRYTHDVVLLCQVAGYDPVIVETVGLGQNEVPIFVCVDI 1041
+ R + P T L DG+L GNRT+LSR+ITLVES QAELLLD VL+ R+ V SAG RLGIAGPPGAGKS+FIE LG+ LT G++VAV++IDPSS R+GGSILGDKTRM +LS DP AFVR P RG LGG++++T+D+VLLC+ GYD ++VE+VGLGQ+E+ I VD+
Sbjct: 22 ATREMQPKTQRLADGVLDGNRTALSRSITLVESTLKSDEEQAELLLDSVLAQRRSLKPTHVD----------------------------------------------------------------SAGLT-------SFRLGIAGPPGAGKSTFIETLGQLLTAQGHKVAVLAIDPSSSRSGGSILGDKTRMEKLSNDPN----AFVRPSPTRGTLGGVAQHTNDIVLLCEAGGYDIILVESVGLGQSEIVIDDTVDM 205
BLAST of mRNA_H-canaliculatus_F_contig11931.1696.1 vs. uniprot
Match: A0A2D4BST0_PYTIN (LAO/AO transport system ATPase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BST0_PYTIN) HSP 1 Score: 167 bits (422), Expect = 1.460e-44 Identity = 110/253 (43.48%), Postives = 138/253 (54.55%), Query Frame = 1
Query: 283 PYTADLVDGILAGNRTSLSRAITLVESHRLDHRRQAELLLDRVLSVRQEATLAPVPPPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSAGAVLGDPLRLGMRLGIAGPPGAGKSSFIEVLGKSLTTAGNRVAVISIDPSSIRTGGSILGDKTRMHELSRDPRRVGEAFVRGCPARGVLGGISRYTHDVVLLCQVAGYDPVIVETVGLGQNEVPIFVCVDI 1041
P T LV+G++AGNRT+LSRAITL ES +QAEL+LD VL R++A S LG P RLGIAGPPGAGKS+FIE LG+ LT G++VAV++IDPSS R+GGSILGDKTRM LS DP AFVR P+RG LGG++++T+D+VLLC+ AGYD V+VE+VGLGQ+E+ I VD+
Sbjct: 3 PSTQRLVEGVIAGNRTALSRAITLAESSLKRDEQQAELMLDTVLKKRRDARHGHARQSSS-----------------------------------------------------------------LGLP---SFRLGIAGPPGAGKSTFIESLGQHLTERGHKVAVLAIDPSSSRSGGSILGDKTRMTNLSNDPN----AFVRPSPSRGTLGGVAQHTNDIVLLCEAAGYDIVLVESVGLGQSEIIIDDTVDM 183
BLAST of mRNA_H-canaliculatus_F_contig11931.1696.1 vs. uniprot
Match: G4ZEZ6_PHYSP (AAA domain-containing protein n=21 Tax=Phytophthora TaxID=4783 RepID=G4ZEZ6_PHYSP) HSP 1 Score: 166 bits (421), Expect = 1.770e-44 Identity = 108/253 (42.69%), Postives = 135/253 (53.36%), Query Frame = 1
Query: 283 PYTADLVDGILAGNRTSLSRAITLVESHRLDHRRQAELLLDRVLSVRQEATLAPVPPPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSAGAVLGDPLRLGMRLGIAGPPGAGKSSFIEVLGKSLTTAGNRVAVISIDPSSIRTGGSILGDKTRMHELSRDPRRVGEAFVRGCPARGVLGGISRYTHDVVLLCQVAGYDPVIVETVGLGQNEVPIFVCVDI 1041
P T L DG+L GNRT+LSR+ITLVES QAELLLD VL+ R+ A V AG RLGIAGPPGAGKS+FIE LG+ LT G++VAV++IDPSS R+GGSILGDKTRM +LS DP AFVR P+RG LGG++++T+D+VLLC+ GYD ++VE+VGLGQ+E+ I VD+
Sbjct: 3 PMTRRLADGVLQGNRTALSRSITLVESTLKSDEEQAELLLDSVLAQRRSLKPAHVD----------------------------------------------------------------QAGLT-------SFRLGIAGPPGAGKSTFIETLGQFLTAQGHKVAVLAIDPSSSRSGGSILGDKTRMEKLSNDPN----AFVRPSPSRGTLGGVAQHTNDIVLLCEAGGYDIILVESVGLGQSEIVIDDTVDM 180
BLAST of mRNA_H-canaliculatus_F_contig11931.1696.1 vs. uniprot
Match: W7TPV1_9STRA (Methylmalonic aciduria type a mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPV1_9STRA) HSP 1 Score: 167 bits (424), Expect = 4.310e-44 Identity = 110/257 (42.80%), Postives = 138/257 (53.70%), Query Frame = 1
Query: 283 PYTADLVDGILAGNRTSLSRAITLVESHRLDHRRQAELLLDRVL-----SVRQEATLAPVPPPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSAGAVLGDPLRLG-------MRLGIAGPPGAGKSSFIEVLGKSLTTAGN-RVAVISIDPSSIRTGGSILGDKTRMHELSRDPRRVGEAFVRGCPARGVLGGISRYTHDVVLLCQVAGYDPVIVETVGLGQNE 1014
P T L +G+L GNR +LSRAITL+ES + HR AE LLD V+ VR++ L P S A + D R+G +R+GIAGPPGAGKS+FIE LGK LT + RVAVI++DPSS R+GGSILGDKTRM+EL++DP+ AFVR CP GVLGG++RYT+DVVLLCQ A +D V +E+VGLGQ+E
Sbjct: 46 PETRQLAEGVLRGNRLALSRAITLIESTKESHRLDAEALLDHVVYERSRRVREKGRLKP--------------------------------------------------------------GNSTSNAACVADEGRIGTSENVRPLRVGIAGPPGAGKSTFIEALGKYLTDSKKLRVAVIAVDPSSSRSGGSILGDKTRMYELAKDPK----AFVRACPTSGVLGGVARYTNDVVLLCQAASFDIVFIESVGLGQSE 236
BLAST of mRNA_H-canaliculatus_F_contig11931.1696.1 vs. uniprot
Match: A0A8K1CFL8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CFL8_PYTOL) HSP 1 Score: 165 bits (418), Expect = 6.950e-44 Identity = 110/258 (42.64%), Postives = 135/258 (52.33%), Query Frame = 1
Query: 283 PYTADLVDGILAGNRTSLSRAITLVESHRLDHRRQAELLLDRVLSVRQE-----ATLAPVPPPRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSAGAVLGDPLRLGMRLGIAGPPGAGKSSFIEVLGKSLTTAGNRVAVISIDPSSIRTGGSILGDKTRMHELSRDPRRVGEAFVRGCPARGVLGGISRYTHDVVLLCQVAGYDPVIVETVGLGQNEVPIFVCVDI 1041
P T LV+G+ AGNRT+LSRAITLVES QAELLLD VL R++ L +P RLGIAGPPGAGKS+FIE LG+ LT G++VAV++IDPSS RTGGSILGDKTRM LS DP AFVR P+RG LGG++++T+D+VLLC+ AGYD V+VE+VGLGQ+E+ I VD+
Sbjct: 17 PITKKLVEGVTAGNRTALSRAITLVESTLKSDGEQAELLLDEVLKRRRDIRNRQTKLQALP----------------------------------------------------------------------------SFRLGIAGPPGAGKSTFIEALGQYLTKKGHKVAVLAIDPSSSRTGGSILGDKTRMTYLSNDPN----AFVRPSPSRGTLGGVAQHTNDIVLLCEAAGYDIVLVESVGLGQSEIVIDDTVDM 194 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11931.1696.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11931.1696.1 >prot_H-canaliculatus_F_contig11931.1696.1 ID=prot_H-canaliculatus_F_contig11931.1696.1|Name=mRNA_H-canaliculatus_F_contig11931.1696.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=399bp HARSTLNCLLCVVFLSRLATSTQLWSCIEGRHRPCPPSSVDRAASCSTTTback to top mRNA from alignment at H-canaliculatus_F_contig11931:42..3300- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig11931.1696.1 ID=mRNA_H-canaliculatus_F_contig11931.1696.1|Name=mRNA_H-canaliculatus_F_contig11931.1696.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3259bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11931:42..3300- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11931:42..3300- >mRNA_H-canaliculatus_F_contig11931.1696.1 ID=mRNA_H-canaliculatus_F_contig11931.1696.1|Name=mRNA_H-canaliculatus_F_contig11931.1696.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2394bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11931:42..3300- (Hapterophycus canaliculatus Oshoro5f female)back to top |