mRNA_H-canaliculatus_F_contig11826.1615.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig11826.1615.1
Unique NamemRNA_H-canaliculatus_F_contig11826.1615.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig11826.1615.1 vs. uniprot
Match: A0A6H5KAD0_9PHAE (Asparagine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KAD0_9PHAE)

HSP 1 Score: 406 bits (1044), Expect = 1.880e-137
Identity = 203/258 (78.68%), Postives = 214/258 (82.95%), Query Frame = 1
Query:    1 THTVPLLLSVLSLRIQATHDFFRGEGFLYLQSPIITASDCEGAGEMFRVTTLPSEVSKVPTLEDGSTDYSKDFFGKPAFLTVSGQLSGETHACAMGDVYTFGPTFRAENSQTARHLAEFWMIEPEMSFADLRDDMDNAEAFVKHVVAHAMEVCGPDLEFFNKFYDKQLLERLQRIKDKPFVR---------------------------------TEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNEDGKTVAAMD 675
            T+T+  +  V S   QATHDFFR EGFLYLQSPIITASDCEGAGEMFRVTTLPSEVSKVPTLEDGSTDY++DFFGKPAFLTVSGQLSGETHACA+GDVYTFGPTFRAENSQT RHLAEFWMIEPEMSFADLRDDMDNAEAFVKHVV+HAMEVCG DLEFFNKFYDK+LL+RLQRIKDKPFVR                                 TEHERWLAETRY+TAVFVYDYPRDIKAFYMRDN+DGKTVAAMD
Sbjct:  243 TNTIAAVARVRSALAQATHDFFRAEGFLYLQSPIITASDCEGAGEMFRVTTLPSEVSKVPTLEDGSTDYAQDFFGKPAFLTVSGQLSGETHACALGDVYTFGPTFRAENSQTTRHLAEFWMIEPEMSFADLRDDMDNAEAFVKHVVSHAMEVCGSDLEFFNKFYDKELLQRLQRIKDKPFVRVRYADAVTALQEEIAKDPSKWAFPDVSFGTDLQTEHERWLAETRYNTAVFVYDYPRDIKAFYMRDNDDGKTVAAMD 500          
BLAST of mRNA_H-canaliculatus_F_contig11826.1615.1 vs. uniprot
Match: A0A7S0YYM8_9CRYP (Asparagine--tRNA ligase (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YYM8_9CRYP)

HSP 1 Score: 321 bits (822), Expect = 6.080e-105
Identity = 157/258 (60.85%), Postives = 187/258 (72.48%), Query Frame = 1
Query:    1 THTVPLLLSVLSLRIQATHDFFRGEGFLYLQSPIITASDCEGAGEMFRVTTLPSEVSKVPTLEDGSTDYSKDFFGKPAFLTVSGQLSGETHACAMGDVYTFGPTFRAENSQTARHLAEFWMIEPEMSFADLRDDMDNAEAFVKHVVAHAMEVCGPDLEFFNKFYDKQLLERLQRIKDKPFVR---------------------------------TEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNEDGKTVAAMD 675
            T+T+  +  V S   QATH FF+G+GF Y+Q+P+ITASDCEGAGE+FRVTTLPSEVSK+P  E G  DYS+DFF KPA+LT SGQLS ET+A A+GDVYTFGPTFRAENSQT +HLAEFWMIEPE++F DL  DM NAE FVK+VV H ++ C  DL+FFN+FYDK LLERL  + +KPF R                                 TEHERWL+ET++  A FVY+YPR+IKAFYMRDN+DGKTVAAMD
Sbjct:  227 TNTIASVSRVRSALAQATHQFFQGKGFFYVQTPLITASDCEGAGELFRVTTLPSEVSKIPKTEGGQIDYSEDFFSKPAYLTCSGQLSAETYASALGDVYTFGPTFRAENSQTTKHLAEFWMIEPELAFCDLEGDMQNAEDFVKYVVKHVIDTCPEDLDFFNQFYDKGLLERLDALVNKPFARVTYTEAVELLQEEIAKDPSKWQFPDVKFGTDLQTEHERWLSETKFGAATFVYNYPREIKAFYMRDNDDGKTVAAMD 484          
BLAST of mRNA_H-canaliculatus_F_contig11826.1615.1 vs. uniprot
Match: A0A7S2RZ04_9STRA (Asparagine--tRNA ligase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZ04_9STRA)

HSP 1 Score: 313 bits (802), Expect = 1.460e-104
Identity = 158/258 (61.24%), Postives = 186/258 (72.09%), Query Frame = 1
Query:    1 THTVPLLLSVLSLRIQATHDFFRGEGFLYLQSPIITASDCEGAGEMFRVTTLPSEVSKVPTLEDGSTDYSKDFFGKPAFLTVSGQLSGETHACAMGDVYTFGPTFRAENSQTARHLAEFWMIEPEMSFADLRDDMDNAEAFVKHVVAHAMEVCGPDLEFFNKFYDKQLLERLQRIKDKPFVR---------------------------------TEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNEDGKTVAAMD 675
            T+T+  +  V S+   ATH++F+  GF YLQSP+ITASD EGAGEMFRVTTLPS+V+ +P  +DG  D+S+DFFGK A+LTVSGQLSGE +ACA+GD+YTFGPTFRAENSQT RHLAEF MIEPE++F DL  +MDNAE FVK VV  A+E CG DL FFN+F DK LLERL ++ D+PF R                                 TEHERWLAET++ TA FVYDYPRDIKAFYMRDN DGKTVAAMD
Sbjct:    9 TNTIAAVARVRSVLAFATHEYFQQLGFHYLQSPLITASDTEGAGEMFRVTTLPSDVAALPKTKDGQIDFSEDFFGKAAYLTVSGQLSGEVYACALGDIYTFGPTFRAENSQTTRHLAEFHMIEPEIAFCDLDQNMDNAEGFVKFVVQRALEKCGDDLSFFNQFIDKGLLERLNKVVDEPFARVSYSEAVALLQEEIAKDPSKWQFPDVEFGTDLQTEHERWLAETKFGTATFVYDYPRDIKAFYMRDNTDGKTVAAMD 266          
BLAST of mRNA_H-canaliculatus_F_contig11826.1615.1 vs. uniprot
Match: A0A7S2XZ42_9STRA (Asparagine--tRNA ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ42_9STRA)

HSP 1 Score: 321 bits (823), Expect = 3.460e-104
Identity = 159/258 (61.63%), Postives = 187/258 (72.48%), Query Frame = 1
Query:    1 THTVPLLLSVLSLRIQATHDFFRGEGFLYLQSPIITASDCEGAGEMFRVTTLPSEVSKVPTLEDGSTDYSKDFFGKPAFLTVSGQLSGETHACAMGDVYTFGPTFRAENSQTARHLAEFWMIEPEMSFADLRDDMDNAEAFVKHVVAHAMEVCGPDLEFFNKFYDKQLLERLQRIKDKPFVR---------------------------------TEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNEDGKTVAAMD 675
            T+T+  +  V S   Q+TH FF+ +GF YLQSP+ITASDCEGAGEMFRVTTLPS++  +P  EDG  D++KDFFGKPAFLTVSGQLS ETHACA+GDVYTFGPTFRAENSQTARHLAEF MIEPEM+F +L+++MDNAE +VK+VV H ++ CG DLEFF KFY+K+LL+RL  +  KPF R                                 TEHERWL E  +  A FVY+YPRDIKAFYMRDN DGKTVAAMD
Sbjct:  239 TNTIAAVARVRSALAQSTHRFFQDKGFFYLQSPLITASDCEGAGEMFRVTTLPSKIENMPKTEDGELDFTKDFFGKPAFLTVSGQLSAETHACALGDVYTFGPTFRAENSQTARHLAEFNMIEPEMAFTNLQENMDNAEEYVKYVVQHVLDNCGDDLEFFKKFYNKELLDRLDVLVSKPFARVEYTKAIELLVEEIAKDPSQWQFPDVKFGTDLQTEHERWLCEKHFGCATFVYNYPRDIKAFYMRDNADGKTVAAMD 496          
BLAST of mRNA_H-canaliculatus_F_contig11826.1615.1 vs. uniprot
Match: A0A835Z2U2_9STRA (Asparagine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2U2_9STRA)

HSP 1 Score: 317 bits (811), Expect = 1.840e-103
Identity = 161/258 (62.40%), Postives = 188/258 (72.87%), Query Frame = 1
Query:    1 THTVPLLLSVLSLRIQATHDFFRGEGFLYLQSPIITASDCEGAGEMFRVTTLPSEVSKVPTLEDGSTDYSKDFFGKPAFLTVSGQLSGETHACAMGDVYTFGPTFRAENSQTARHLAEFWMIEPEMSFADLRDDMDNAEAFVKHVVAHAMEVCGPDLEFFNKFYDKQLLERLQRIKDKPFVR---------------------------------TEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNEDGKTVAAMD 675
            T+T+  +  V S    ATH FF+GEGF YLQ+P+ITASDCEGAGEMFRVTTLP   +  PT + G+ D++KDFFG+PA+LTVSGQLS ETHACA+GDVYTFGPTFRAENSQT RHLAEF MIEPEM+FADL DDMDNAEAFVKHVV+H ++ C  DL+FF  FYDK L ++LQR+ D+PF R                                 TEHERWLAE +++TA FVY+YPR IKAFYMRDNEDG TVAAMD
Sbjct:  153 TNTIGAVARVRSALAFATHQFFQGEGFQYLQTPLITASDCEGAGEMFRVTTLPP--ASPPTDDAGAVDFAKDFFGRPAYLTVSGQLSAETHACALGDVYTFGPTFRAENSQTTRHLAEFNMIEPEMAFADLIDDMDNAEAFVKHVVSHVLQNCRSDLDFFAGFYDKGLFDKLQRLVDQPFARIEYTAAVKLLQEEIAMDPSQWQFPDVSFGTDLQTEHERWLAEKKFNTATFVYNYPRTIKAFYMRDNEDGATVAAMD 408          
BLAST of mRNA_H-canaliculatus_F_contig11826.1615.1 vs. uniprot
Match: A0A7S0DYW5_9EUKA (Asparagine--tRNA ligase n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0DYW5_9EUKA)

HSP 1 Score: 311 bits (797), Expect = 3.670e-101
Identity = 156/258 (60.47%), Postives = 184/258 (71.32%), Query Frame = 1
Query:    1 THTVPLLLSVLSLRIQATHDFFRGEGFLYLQSPIITASDCEGAGEMFRVTTLPSEVSKVPTLEDGSTDYSKDFFGKPAFLTVSGQLSGETHACAMGDVYTFGPTFRAENSQTARHLAEFWMIEPEMSFADLRDDMDNAEAFVKHVVAHAMEVCGPDLEFFNKFYDKQLLERLQRIKDKPFVR---------------------------------TEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNEDGKTVAAMD 675
            T+++  +  V S   QATH FF+GEGF Y+Q+P+ITASDCEGAGEMFRVTTLP+E   VP   D   DYS+DFFGKPAFLTVSGQLS ET ACA+GDVYTFGPTFRAE+S T RHLAEFWMIEPEM+FADL+DDMDNAEAFVK  VA A+E C  DLEFF++FY+K LL++L+ + + PF R                                 TEHERW++E  +    FVYDYP++IKAFYMRDN DGKTVAAMD
Sbjct:  166 TNSIAAVARVRSTLAQATHQFFQGEGFRYVQTPLITASDCEGAGEMFRVTTLPAEPELVPLTADKKVDYSQDFFGKPAFLTVSGQLSAETMACALGDVYTFGPTFRAEDSNTGRHLAEFWMIEPEMAFADLQDDMDNAEAFVKFAVAQALEHCPDDLEFFDQFYEKGLLDKLKGLLEGPFGRVRYEDAVGMVAAEIAKDPSKWEFPECEFGTDLATEHERWISEVAFGKPTFVYDYPKEIKAFYMRDNPDGKTVAAMD 423          
BLAST of mRNA_H-canaliculatus_F_contig11826.1615.1 vs. uniprot
Match: A0A7S2MHU0_9STRA (Asparagine--tRNA ligase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MHU0_9STRA)

HSP 1 Score: 310 bits (793), Expect = 3.930e-100
Identity = 156/258 (60.47%), Postives = 186/258 (72.09%), Query Frame = 1
Query:    1 THTVPLLLSVLSLRIQATHDFFRGEGFLYLQSPIITASDCEGAGEMFRVTTLPSEVSKVPTLEDGSTDYSKDFFGKPAFLTVSGQLSGETHACAMGDVYTFGPTFRAENSQTARHLAEFWMIEPEMSFADLRDDMDNAEAFVKHVVAHAMEVCGPDLEFFNKFYDKQLLERLQRIKDKPFVR---------------------------------TEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNEDGKTVAAMD 675
            T+T+  +  V S+   ATH++F+  GF +LQSP+ITASDCEGAGEMFRVTTLPSEV+K+PT +DG  DY +DFFGK A+LTVSGQLS ET+A A+GDVYTFGPTFRAENSQT RHLAEF MIEPE++F DL   MDNAE FVK VV+ A+  C  DL+FFN+FYDK L+ERLQR+ ++PF R                                 TEHERWL+ET + TA FV+ YPR IKAFYMRDNEDG+TVAAMD
Sbjct:  201 TNTIAAVARVRSVLAFATHEYFQDLGFHFLQSPLITASDCEGAGEMFRVTTLPSEVAKIPTTDDGMVDYKEDFFGKAAYLTVSGQLSAETYASALGDVYTFGPTFRAENSQTTRHLAEFHMIEPEIAFCDLDQSMDNAENFVKFVVSQALAKCRDDLDFFNQFYDKSLIERLQRVVNEPFARVSYREAISLLQTEISKDPSKWSFPDVVFGTDLQTEHERWLSETHFGTATFVHGYPRGIKAFYMRDNEDGETVAAMD 458          
BLAST of mRNA_H-canaliculatus_F_contig11826.1615.1 vs. uniprot
Match: A0A7S4D5P5_HETAK (Asparagine--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5P5_HETAK)

HSP 1 Score: 298 bits (763), Expect = 5.870e-96
Identity = 152/260 (58.46%), Postives = 182/260 (70.00%), Query Frame = 1
Query:    1 THTVPLLLSVLSLRIQATHDFFRGEGFLYLQSPIITASDCEGAGEMFRVTTLPSEVSKVPTLEDGS--TDYSKDFFGKPAFLTVSGQLSGETHACAMGDVYTFGPTFRAENSQTARHLAEFWMIEPEMSFADLRDDMDNAEAFVKHVVAHAMEVCGPDLEFFNKFYDKQLLERLQRIKDKPFVR---------------------------------TEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNEDGKTVAAMD 675
            T+T+  +  V S    ATH+FF+G+GF YLQ+P+ITASDCEGAGEMFRV+TLPS +S++P  ED     D+ +DFFG  AFLTVSGQL+ ET+ACA+GDVYTFGPTFRAENSQT RHLAEF MIEPEM+FADL DDM NAEAFVKHV          DL+FF +F+DK L  RL+R++D+PF R                                 TEHERWL+E ++ TA FVY+YPR IKAFYMRDNEDG+TVAAMD
Sbjct:  171 TNTIAAVARVRSQLAYATHNFFQGQGFQYLQTPLITASDCEGAGEMFRVSTLPSRISELPRREDDPDRVDFGRDFFGAEAFLTVSGQLNAETYACALGDVYTFGPTFRAENSQTTRHLAEFNMIEPEMAFADLADDMANAEAFVKHVXXXXXXXXXXDLQFFQQFFDKGLTARLERVRDQPFARVEYREAVALLQEEIAKDRSKWQYPDVEFGTDLQTEHERWLSEAKFGTATFVYNYPRGIKAFYMRDNEDGETVAAMD 430          
BLAST of mRNA_H-canaliculatus_F_contig11826.1615.1 vs. uniprot
Match: W7TW83_9STRA (Asparagine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TW83_9STRA)

HSP 1 Score: 300 bits (768), Expect = 6.520e-96
Identity = 155/260 (59.62%), Postives = 182/260 (70.00%), Query Frame = 1
Query:    1 THTVPLLLSVLSLRIQATHDFFRGEGFLYLQSPIITASDCEGAGEMFRVTTLPSEVSKVPTLE--DGSTDYSKDFFGKPAFLTVSGQLSGETHACAMGDVYTFGPTFRAENSQTARHLAEFWMIEPEMSFADLRDDMDNAEAFVKHVVAHAMEVCGPDLEFFNKFYDKQLLERLQRIKDKPFVR---------------------------------TEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNEDGKTVAAMD 675
            T+T+  +  V S    ATH+FF+ +GF YLQSPIITASDCEGAGEMFRVTTLP +VS++P +E  +   DYS DFFG PA+LTVSGQLSGE +ACAMGDVYTFGPTFRAENSQT RHLAEF MIEPEM+FADL+D+M NAEA+VK +V H ++ C  DL FF KFYDK L+ RL  +  + F R                                 TEHERWL E ++  A FVY+YPR+IKAFYMRDNEDGKTVAAMD
Sbjct:  239 TNTLAAVARVRSALAFATHNFFQEQGFYYLQSPIITASDCEGAGEMFRVTTLPDKVSELPRVEGEEDRIDYSHDFFGAPAYLTVSGQLSGEAYACAMGDVYTFGPTFRAENSQTTRHLAEFNMIEPEMAFADLQDNMRNAEAYVKAIVRHVLKECEEDLAFFEKFYDKTLMARLNTLVSESFARVEYTEAVRLLQEEIAKDRGAWQFPDVDFGTDLQTEHERWLCEKKFQRATFVYNYPREIKAFYMRDNEDGKTVAAMD 498          
BLAST of mRNA_H-canaliculatus_F_contig11826.1615.1 vs. uniprot
Match: B7G8H8_PHATC (Asparagine--tRNA ligase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G8H8_PHATC)

HSP 1 Score: 288 bits (737), Expect = 1.240e-92
Identity = 149/267 (55.81%), Postives = 186/267 (69.66%), Query Frame = 1
Query:    1 THTVPLLLSVLSLRIQATHDFFRGEGFLYLQSPIITASDCEGAGEMFRVTTLPSE-VSKVPTL------EDGSTDYSKDFFGKPAFLTVSGQLSGETHACAMGDVYTFGPTFRAENSQTARHLAEFWMIEPEMSFADLRDDMDNAEAFVKHVVAHAMEVCGPDLEFFNKFYDKQLLERLQRIKDKPFVR---------------------------------TEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNED--GKTVAAMD 675
            T+T+  +  V S    A H FF+ +GF+Y+Q+P++TASDCEGAGE+FRVTTL  + VS +P        E    DYS+DFFGKPA+LTVSGQL GETHACA+GD+YTFGPTFRAENSQT+RHLAEF M+EPEM+FADL   M+NAE  +K+VV H ++ CG DLEFF KFYDK L+ RL+++  KPFVR                                 TEHERWLAET++++AVFVY+YP+ IKAFYMRDNE+  G+TV AMD
Sbjct:  116 TNTIAAVARVRSHLAGAIHAFFQTQGFVYVQTPLVTASDCEGAGELFRVTTLNLDSVSTLPKAKNENGKEQDRVDYSEDFFGKPAYLTVSGQLGGETHACALGDIYTFGPTFRAENSQTSRHLAEFHMVEPEMAFADLTSAMNNAENMLKYVVQHVLDSCGEDLEFFQKFYDKALMTRLEKLVQKPFVRVSYREAIEFLQEEINKDPSKWQFPDVSFGTDLATEHERWLAETKFESAVFVYNYPKAIKAFYMRDNEEDGGETVNAMD 382          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11826.1615.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KAD0_9PHAE1.880e-13778.68Asparagine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S0YYM8_9CRYP6.080e-10560.85Asparagine--tRNA ligase (Fragment) n=1 Tax=Hemisel... [more]
A0A7S2RZ04_9STRA1.460e-10461.24Asparagine--tRNA ligase (Fragment) n=1 Tax=Rhizoch... [more]
A0A7S2XZ42_9STRA3.460e-10461.63Asparagine--tRNA ligase n=1 Tax=Fibrocapsa japonic... [more]
A0A835Z2U2_9STRA1.840e-10362.40Asparagine--tRNA ligase n=1 Tax=Tribonema minus Ta... [more]
A0A7S0DYW5_9EUKA3.670e-10160.47Asparagine--tRNA ligase n=1 Tax=Phaeocystis antarc... [more]
A0A7S2MHU0_9STRA3.930e-10060.47Asparagine--tRNA ligase n=1 Tax=Dictyocha speculum... [more]
A0A7S4D5P5_HETAK5.870e-9658.46Asparagine--tRNA ligase n=1 Tax=Heterosigma akashi... [more]
W7TW83_9STRA6.520e-9659.62Asparagine--tRNA ligase n=2 Tax=Monodopsidaceae Ta... [more]
B7G8H8_PHATC1.240e-9255.81Asparagine--tRNA ligase n=2 Tax=Phaeodactylum tric... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig11826contigH-canaliculatus_F_contig11826:1..3879 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score291.6
Seed ortholog evalue3.2e-76
Seed eggNOG ortholog2850.Phatr42247
KEGG rclassRC00055,RC00523
KEGG koko:K01893
KEGG ReactionR03648
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
GOsGO:0003674,GO:0003824,GO:0004812,GO:0004816,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006421,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.OB-fold nucleic acid binding domain
EggNOG OGs2XBAQ@2836,COG0017@1,KOG0554@2759
EC6.1.1.22
COG Functional cat.J
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionAsparaginyl-tRNA Synthetase
Ec32 orthologEc-16_001810.1
Exons5
Model size675
Cds size675
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig11826.1615.1prot_H-canaliculatus_F_contig11826.1615.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig11826 1..3879 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928883.5743716-CDS-H-canaliculatus_F_contig11826:0..1291622928883.5743716-CDS-H-canaliculatus_F_contig11826:0..129Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11826 1..129 -
1696845600.4551778-CDS-H-canaliculatus_F_contig11826:0..1291696845600.4551778-CDS-H-canaliculatus_F_contig11826:0..129Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11826 1..129 -
1622928883.5894907-CDS-H-canaliculatus_F_contig11826:1848..19801622928883.5894907-CDS-H-canaliculatus_F_contig11826:1848..1980Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11826 1849..1980 -
1696845600.4732137-CDS-H-canaliculatus_F_contig11826:1848..19801696845600.4732137-CDS-H-canaliculatus_F_contig11826:1848..1980Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11826 1849..1980 -
1622928883.600624-CDS-H-canaliculatus_F_contig11826:2644..28031622928883.600624-CDS-H-canaliculatus_F_contig11826:2644..2803Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11826 2645..2803 -
1696845600.4864843-CDS-H-canaliculatus_F_contig11826:2644..28031696845600.4864843-CDS-H-canaliculatus_F_contig11826:2644..2803Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11826 2645..2803 -
1622928883.618388-CDS-H-canaliculatus_F_contig11826:3234..33241622928883.618388-CDS-H-canaliculatus_F_contig11826:3234..3324Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11826 3235..3324 -
1696845600.4943802-CDS-H-canaliculatus_F_contig11826:3234..33241696845600.4943802-CDS-H-canaliculatus_F_contig11826:3234..3324Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11826 3235..3324 -
1622928883.629032-CDS-H-canaliculatus_F_contig11826:3714..38791622928883.629032-CDS-H-canaliculatus_F_contig11826:3714..3879Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11826 3715..3879 -
1696845600.5054414-CDS-H-canaliculatus_F_contig11826:3714..38791696845600.5054414-CDS-H-canaliculatus_F_contig11826:3714..3879Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig11826 3715..3879 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig11826.1615.1

>prot_H-canaliculatus_F_contig11826.1615.1 ID=prot_H-canaliculatus_F_contig11826.1615.1|Name=mRNA_H-canaliculatus_F_contig11826.1615.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=225bp
THTVPLLLSVLSLRIQATHDFFRGEGFLYLQSPIITASDCEGAGEMFRVT
TLPSEVSKVPTLEDGSTDYSKDFFGKPAFLTVSGQLSGETHACAMGDVYT
FGPTFRAENSQTARHLAEFWMIEPEMSFADLRDDMDNAEAFVKHVVAHAM
EVCGPDLEFFNKFYDKQLLERLQRIKDKPFVRTEHERWLAETRYDTAVFV
YDYPRDIKAFYMRDNEDGKTVAAMD
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mRNA from alignment at H-canaliculatus_F_contig11826:1..3879-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig11826.1615.1 ID=mRNA_H-canaliculatus_F_contig11826.1615.1|Name=mRNA_H-canaliculatus_F_contig11826.1615.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3879bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11826:1..3879- (Hapterophycus canaliculatus Oshoro5f female)
ACACACACCGTGCCCCTCCTGCTTTCCGTTTTATCGCTGCGCATCCAGGC TACCCACGACTTTTTCCGAGGGGAGGGGTTCCTGTACCTGCAGTCCCCCA TCATCACCGCCTCCGACTGCGAGGGCGCCGGCGAGATGTTCCGCGTCACC ACCTTGCCTTCGGAGGTACGGACGACTCGAGTCAGCTCCCCACTATCCAC AACCCCGCTGAATCAAACGAGTGCCTAAGCTCGGTCCATGCGCACGTGTA TGTGTATGTGTATGTACGTGCGTCGGTGGAAACAAGTCTTCCGGAGAAAG CGGCTTGGGACGGGCCATCGTCCCCGACCACTAGCGGATGAATGCCTCTC CTCGCGTGGCTTGGCGTGTGTGGTTGTGGATCCACGAGACGTTCGGCCTG GCACCGACGCTTGTGATGCTGGAGCTGCTGCCGCCGCTGCCGCCGCTGCT GCTGCTGCTGCTTCTATGAGTCGCAGTTGTCGCCGCTCACCACCGGGGAC GTCGATGCCGCTTGTTTCGTCGCTGCTGCTGCTGCTGTTGCTGCAACTAC TCTAGGTGTCTAAGGTGCCGACCCTGGAGGACGGTTCCACGGACTACTCC AAGGACTTCTTCGGGAAGCCGGCCTTCCTCACCGTGTCTGGACAGGTAAG ACGGGCTCGGGCCCGGGCTTGGAAGACAGCCAAGGTCGACGCGGCTATAA GGGGATATCTCGATGTGCTCGCGAACCCGAGCGATCCACTGCGGTTCCGT CAAGTCTATTTTTCGAATCTGGCGGGTTGGATGGGAACGCTCCGTCTGTT TCTGTTGAAGCGCCAACAGAACTTCCCAGGTGTCGGCGATCGAGATGGTA TGCGAACCCGCTCAACGCCCCTTGCCTAGCCTAGCCTTGCCTAGCCTTGC CTCTCATCTAACAAACGCTTCTAATGATTCTGGCTTCTGGCCTAGTTTGT GAACCCGGGGCTTGCCGGACTGCGCCTCTTAAAAGGTTGTGTTTGTGGTC AACGACCACATGACTTCCGTCAACACGTCACCGAGATAGCCCCTGCCCCT CGCCCCCGCAATCAACACGCCACCAGCTTTCGGGGGAGACCCACGCCTGC GCCATGGGCGATGTGTACACGTTCGGGCCGACGTTCCGCGCGGAGAACAG CCAGACCGCGAGGCACCTCGCCGAGTTCTGGATGATCGAGCCGGAGATGT CGTTCGCGGATCTGAGGGATGACATGGACAACGCGGTGAGGGGAGGGGAT CCGCGGTCGATCACTGTTCGATTCGTTTGCTCGTCCGACCGGCCTTCTGC TCGAGTCGCTGCAATGCTGTTGTGTCCTGCTGCCCCTAGAGCCCGTGCAC TCTGCGTGTCGAATTCTCGAGCGCGCTGCAGCTTTGATATATCTGTGTCG GTACTCTTGTTCTCTAGTCGCGAGCCTCGCTCTGTTGGCGTGTTGCTGCC GCACGTATCCTGCTGCTGCGAGCCTTTTTTTTAAAGAAAACATAACAACA CCGTTAGAACACCTCCTGAGGTGCGTCGTGTGAGGCTTACCCCGAGGCTT CTGTTGAGTTCAAACCTTTTTTTTGTTTCGCTCGTTTTGGCTCTTTTTGA GCTGCGGGTTCCTAAGGATCTAACGGTAGATAACGGCCGTACTCCTCGTC GGCGGAAGTATGGGCGCTTGATCTCCTACGGAGATCGTGGTCTGCTTTCG GGTTTCGCAGGGAGAGGGAGATGCGGGGATCCGAACGCTCACGTAGCGCC ACCGGGCCATAATATTGTTTTGGAGCAGGTGCAGTTTTTGTTGCATGCGG CGTTTTTTTCCGCCCGCTGCGTGTGTTTCAATTTCTTTTTTCAAGTGCCA CGCGATGAGTGAATTGCTTCACAGCAGCAACAACGACAAACGTCGACAGG AAGCCTTCGTCAAGCACGTGGTGGCTCACGCGATGGAAGTGTGCGGCCCT GACCTGGAGTTCTTCAACAAGTTCTACGACAAGCAGCTCCTCGAGAGGCT CCAGAGGATCAAAGACAAGCCTTTCGTCAGGGTGAGGGGATCCGCCCGTC AGGGTTGGCACAAGGGTACGGGGTAGGGGTGATGGTGGGGGGGCAGCTCA GAGGGCTCAAGGATGTGCGTGGCAAAGAGAAAAAGGAGTAAAAGATGTGT GTGAAAAGAGAGAGGAGAGCAACGACCTACTTACTGCTTGAAAATGGTGA GGCCAGAACGAGGAGCGGCACAAAGCCAGGATCGCGAAAGGGAGACAAAG ACAAGAGCAAGGAGCTGATCGAGGTGGTGGAAGAGCTTTGGGGATGAAGT GTCAAGCCACGGCGCAATCACTCTATTATTTTCTTCTTCTACGTTGAAAA GGTCGATACGTAAGTCGGTGGACACCACGAAAACAGATCTTTCAGGTTGA CTACCAACCTGAAAGGTGCTGGACGTGAACGGGCTACATGAGTAGAAAGC TCCTTGGGTGAGCACCCAAATGAGGAGAGACCTGGACCCCCCCCTACCCC CCCCCCTTCGCCATTTTCCCCGTTCTTCTGCTGCACATAGGTCCGCTACG CCGATGCGGTGACGGCCTTGCAAGAGGAGATCGCGAAGGACCCTTCCAAG TGGGCCTTCCCGGACGTCAACTTCGGCACCGACCTGCAGGTGTGGTTGTA TTTGTGCGGATCATGGAGCGGGGCTTCACTCTCTGTTCCTTTTTTATCGG TTTCTTCTTCTGGCGCAAATGTTTTTTTTCTTGTTTCTTTTTTGACTTAC TGACACAAACGCTTCATCTCTCGCTTGAACGTGTCGATGTTTGCTTGCAC CCGAAGACTGACTGCTCATGGGCGGAAAATCGAGGTCGTATTTTGGTGCT GTCATCGTTGTTATTCGTTGGACAACAAGCAAGAGCGGTAACTACGGCGT CGTACAGGCACCACCCCAGTGCCGGTGAAAGGGGGGGCAGTGTCAAGTTA AACGACACGTGGACTTTTTTTTTGTGTGTGAGAAGGAAATGAGTGACTGA ACGACTTCGTTCTGTTCGTGGCGTCCCTCACTTCCAGCGCATGTCTCCTG TTTCGAAGTACAGTCCATCGGAAAGTCATAGCTATTCCCAAGGAACACCC TCTGAGACAGGACTTTCTTGTTGTCCTCGGAGTGTGTCGGCTAGTCGGGA CGGGGCATCGCCCGTGATATCAAAGAAGCATGGCAACCGTAGGCCCTCGT GCACAGCAATGTCACGAGTTATCTTGCTGTATCCCTCTGAACGATGTACT GCCTTCTGATGGCGAACACGCGTAGCGTGAGGACGTACGTAACAAAACCA AGTATCGTAAAAGCTGGTGGTATCTGTCCGCCTTCTAGTTCCCTTTCGAG CCGGGACAGCGAGCCAAAGTACGTCTGTGCGTGTGGATTCGTGGGTGTTT GTCGGCCTCACGAGCGATGGCCTCCGCGGCATCTCGTGACCAACCCCGAG GAAAAGCGAAGCCCAAGTGAACATCAAACCGTGAAATTATTATGATTCGG CCGGGTCGGGGTGCGTGCCCACCGGCCCATGTCTGCGCTGTGTCCCGTCC AGACTGATCACGGGCGCTTGCAAGCGAAAACTCGGCACGGCCGACGCCAG CGGGTGCGAAAAGCCTGTCGCACGTGGAAACACCATGTTCGTATCCGACG TCTAAGTCGTGTCGTGTTTGTTGTTGTCGTCCGACGATTAACCCCGGTCC TTTTTCTCCTCTCGTTCGCGCACGGGTTTTTCTTGTTTGCTCGCCCTCAG ACGGAGCACGAGCGCTGGCTGGCGGAGACACGGTACGACACGGCCGTGTT TGTGTACGACTACCCCCGTGACATCAAGGCGTTCTACATGAGGGACAACG AGGACGGGAAGACCGTGGCCGCGATGGAC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11826:1..3879-

>mRNA_H-canaliculatus_F_contig11826.1615.1 ID=mRNA_H-canaliculatus_F_contig11826.1615.1|Name=mRNA_H-canaliculatus_F_contig11826.1615.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1350bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11826:1..3879- (Hapterophycus canaliculatus Oshoro5f female)
ACACACACCGTGCCCCTCCTGCTTTCCGTTTTATCGCTGCGCATCCAGGC
TACCCACGACTTTTTCCGAGGGGAGGGGTTCCTGTACCTGCAGTCCCCCA
TCATCACCGCCTCCGACTGCGAGGGCGCCGGCGAGATGTTCCGCGTCACC
ACCTTGCCTTCGGAGACACACACCGTGCCCCTCCTGCTTTCCGTTTTATC
GCTGCGCATCCAGGCTACCCACGACTTTTTCCGAGGGGAGGGGTTCCTGT
ACCTGCAGTCCCCCATCATCACCGCCTCCGACTGCGAGGGCGCCGGCGAG
ATGTTCCGCGTCACCACCTTGCCTTCGGAGGTGTCTAAGGTGCCGACCCT
GGAGGACGGTTCCACGGACTACTCCAAGGACTTCTTCGGGAAGCCGGCCT
TCCTCACCGTGTCTGGACAGGTGTCTAAGGTGCCGACCCTGGAGGACGGT
TCCACGGACTACTCCAAGGACTTCTTCGGGAAGCCGGCCTTCCTCACCGT
GTCTGGACAGCTTTCGGGGGAGACCCACGCCTGCGCCATGGGCGATGTGT
ACACGTTCGGGCCGACGTTCCGCGCGGAGAACAGCCAGACCGCGAGGCAC
CTCGCCGAGTTCTGGATGATCGAGCCGGAGATGTCGTTCGCGGATCTGAG
GGATGACATGGACAACGCGCTTTCGGGGGAGACCCACGCCTGCGCCATGG
GCGATGTGTACACGTTCGGGCCGACGTTCCGCGCGGAGAACAGCCAGACC
GCGAGGCACCTCGCCGAGTTCTGGATGATCGAGCCGGAGATGTCGTTCGC
GGATCTGAGGGATGACATGGACAACGCGGAAGCCTTCGTCAAGCACGTGG
TGGCTCACGCGATGGAAGTGTGCGGCCCTGACCTGGAGTTCTTCAACAAG
TTCTACGACAAGCAGCTCCTCGAGAGGCTCCAGAGGATCAAAGACAAGCC
TTTCGTCAGGGAAGCCTTCGTCAAGCACGTGGTGGCTCACGCGATGGAAG
TGTGCGGCCCTGACCTGGAGTTCTTCAACAAGTTCTACGACAAGCAGCTC
CTCGAGAGGCTCCAGAGGATCAAAGACAAGCCTTTCGTCAGGACGGAGCA
CGAGCGCTGGCTGGCGGAGACACGGTACGACACGGCCGTGTTTGTGTACG
ACTACCCCCGTGACATCAAGGCGTTCTACATGAGGGACAACGAGGACGGG
AAGACCGTGGCCGCGATGGACACGGAGCACGAGCGCTGGCTGGCGGAGAC
ACGGTACGACACGGCCGTGTTTGTGTACGACTACCCCCGTGACATCAAGG
CGTTCTACATGAGGGACAACGAGGACGGGAAGACCGTGGCCGCGATGGAC
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