mRNA_H-canaliculatus_F_contig11731.1538.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig11731.1538.1 vs. uniprot
Match: D7FZX8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZX8_ECTSI) HSP 1 Score: 98.2 bits (243), Expect = 1.360e-24 Identity = 54/63 (85.71%), Postives = 57/63 (90.48%), Query Frame = 1 Query: 1 MSLSELPATQKNDMVVSLAALLLEDAGSELSAENLSAVAAATKNELPGYYPALFAAMLEKSGG 189 MSLSELPA QKNDMVVSLAALLLEDAGS L+AEN+SAV AATKNE+P YYP LFAAMLEKS G Sbjct: 38 MSLSELPAPQKNDMVVSLAALLLEDAGSVLTAENISAVVAATKNEVPAYYPTLFAAMLEKSEG 100
BLAST of mRNA_H-canaliculatus_F_contig11731.1538.1 vs. uniprot
Match: A0A6H5KQL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQL7_9PHAE) HSP 1 Score: 77.0 bits (188), Expect = 6.980e-17 Identity = 42/50 (84.00%), Postives = 45/50 (90.00%), Query Frame = 1 Query: 40 MVVSLAALLLEDAGSELSAENLSAVAAATKNELPGYYPALFAAMLEKSGG 189 MVVSLAALLLEDAGS L+AEN+SAV AATKNE+P YYP LFAAMLEKS G Sbjct: 1 MVVSLAALLLEDAGSVLTAENISAVVAATKNEVPAYYPTLFAAMLEKSEG 50
BLAST of mRNA_H-canaliculatus_F_contig11731.1538.1 vs. uniprot
Match: W7TDP6_9STRA (60s acidic ribosomal protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TDP6_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 2.790e-14 Identity = 36/63 (57.14%), Postives = 51/63 (80.95%), Query Frame = 1 Query: 1 MSLSELPATQKNDMVVSLAALLLEDAGSELSAENLSAVAAATKNELPGYYPALFAAMLEKSGG 189 MSL+EL QK +MV+SL+ALLL+D+G ++SAENL AV A+ N + YYPAL+A+++EK+GG Sbjct: 1 MSLAELSPAQKEEMVISLSALLLQDSGVDMSAENLDAVIKASGNTVAAYYPALYASLIEKAGG 63
BLAST of mRNA_H-canaliculatus_F_contig11731.1538.1 vs. uniprot
Match: A0A482S1F3_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S1F3_9ARCH) HSP 1 Score: 64.3 bits (155), Expect = 4.540e-12 Identity = 31/54 (57.41%), Postives = 44/54 (81.48%), Query Frame = 1 Query: 28 QKNDMVVSLAALLLEDAGSELSAENLSAVAAATKNELPGYYPALFAAMLEKSGG 189 +K+ +VVSLAALLL D G+E+SA++LS+V +A+ N +P YYP LFA +EK+GG Sbjct: 11 EKDQLVVSLAALLLSDVGAEISADSLSSVLSASNNTVPAYYPTLFAGFIEKAGG 64
BLAST of mRNA_H-canaliculatus_F_contig11731.1538.1 vs. uniprot
Match: A0A835YLZ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLZ6_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 5.270e-12 Identity = 36/63 (57.14%), Postives = 50/63 (79.37%), Query Frame = 1 Query: 1 MSLSELPATQKNDMVVSLAALLLEDAGSELSAENLSAVAAATKNELPGYYPALFAAMLEKSGG 189 M+ +EL QK++MVVSLAALL EDAG ELSAENL++ +A+ N++ Y+ +LFA+ LEK+GG Sbjct: 1 MAFAELTEGQKSEMVVSLAALLCEDAGVELSAENLNSAVSASGNKVAPYWTSLFASYLEKAGG 63
BLAST of mRNA_H-canaliculatus_F_contig11731.1538.1 vs. uniprot
Match: A0A7S2UUV6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUV6_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 4.050e-11 Identity = 33/63 (52.38%), Postives = 49/63 (77.78%), Query Frame = 1 Query: 1 MSLSELPATQKNDMVVSLAALLLEDAGSELSAENLSAVAAATKNELPGYYPALFAAMLEKSGG 189 M+LS+L K +MVVSLAAL+L D+G ++SA+NL+AV +A+ N++ Y+ LFA+ LEK+GG Sbjct: 1 MALSDLSGAAKEEMVVSLAALVLADSGVDMSADNLNAVVSASGNDIAPYWSTLFASFLEKAGG 63
BLAST of mRNA_H-canaliculatus_F_contig11731.1538.1 vs. uniprot
Match: A0A7S3HK71_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HK71_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 7.240e-10 Identity = 28/59 (47.46%), Postives = 46/59 (77.97%), Query Frame = 1 Query: 13 ELPATQKNDMVVSLAALLLEDAGSELSAENLSAVAAATKNELPGYYPALFAAMLEKSGG 189 ++ K+ +V SLAA++L D+G++++AE+L+AV AA+ N++P YY LFA+ +EKSGG Sbjct: 6 QVTGADKDQLVTSLAAIVLSDSGADITAESLNAVIAASGNQVPAYYATLFASFIEKSGG 64
BLAST of mRNA_H-canaliculatus_F_contig11731.1538.1 vs. uniprot
Match: A0A6V1KRU0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KRU0_HETAK) HSP 1 Score: 57.4 bits (137), Expect = 4.880e-9 Identity = 32/63 (50.79%), Postives = 46/63 (73.02%), Query Frame = 1 Query: 1 MSLSELPATQKNDMVVSLAALLLEDAGSELSAENLSAVAAATKNELPGYYPALFAAMLEKSGG 189 MSL+EL K ++VVSLA+L++ D+ ++LSAENL AV A+ N + Y+ +LFA+ LEKS G Sbjct: 1 MSLAELSGAAKEELVVSLASLVVADSDADLSAENLEAVIKASGNSVASYWTSLFASFLEKSEG 63
BLAST of mRNA_H-canaliculatus_F_contig11731.1538.1 vs. uniprot
Match: A0A7S0QBW6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0QBW6_9EUKA) HSP 1 Score: 54.7 bits (130), Expect = 5.280e-8 Identity = 24/59 (40.68%), Postives = 44/59 (74.58%), Query Frame = 1 Query: 13 ELPATQKNDMVVSLAALLLEDAGSELSAENLSAVAAATKNELPGYYPALFAAMLEKSGG 189 ++ K+ +V SLAA++L D G+++SA+ +++V +A+ N +P YYP L+A+ +EK+GG Sbjct: 15 QVTGADKDQLVTSLAAIILSDCGADISADAINSVLSASGNTVPAYYPTLYASYIEKAGG 73
BLAST of mRNA_H-canaliculatus_F_contig11731.1538.1 vs. uniprot
Match: A0A7S0FQS0_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FQS0_9STRA) HSP 1 Score: 53.1 bits (126), Expect = 3.830e-7 Identity = 30/62 (48.39%), Postives = 45/62 (72.58%), Query Frame = 1 Query: 4 SLSELPATQKNDMVVSLAALLLEDAGSELSAENLSAVAAATKNELPGYYPALFAAMLEKSGG 189 SL++L A+QK D+V SLAA+++ G E+SA+ LSAVA +L G +LFA++++KSGG Sbjct: 31 SLTDLSASQKEDLVASLAAMVVGSTGGEMSADALSAVAKEAGCDLSGAMASLFASVVDKSGG 92 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11731.1538.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11731.1538.1 >prot_H-canaliculatus_F_contig11731.1538.1 ID=prot_H-canaliculatus_F_contig11731.1538.1|Name=mRNA_H-canaliculatus_F_contig11731.1538.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=63bp MSLSELPATQKNDMVVSLAALLLEDAGSELSAENLSAVAAATKNELPGYYback to top mRNA from alignment at H-canaliculatus_F_contig11731:2562..3262+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig11731.1538.1 ID=mRNA_H-canaliculatus_F_contig11731.1538.1|Name=mRNA_H-canaliculatus_F_contig11731.1538.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=701bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11731:2562..3262+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11731:2562..3262+ >mRNA_H-canaliculatus_F_contig11731.1538.1 ID=mRNA_H-canaliculatus_F_contig11731.1538.1|Name=mRNA_H-canaliculatus_F_contig11731.1538.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=378bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11731:2562..3262+ (Hapterophycus canaliculatus Oshoro5f female)back to top |