mRNA_H-canaliculatus_F_contig1172.1530.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1172.1530.1
Unique NamemRNA_H-canaliculatus_F_contig1172.1530.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1172.1530.1 vs. uniprot
Match: A0A6H5KYY6_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYY6_9PHAE)

HSP 1 Score: 363 bits (933), Expect = 3.830e-120
Identity = 179/184 (97.28%), Postives = 183/184 (99.46%), Query Frame = 1 
Query:    1 SGRGQLHLTVLIENMRREGFELLVGPPTVITKQVDGKTHEPFETVEVQVPDEYTGAVVDLLSRRKGEMLNMSPVETGGDAQMTNIEYLVPTRGMIGLRNNMLTATRGTAVMDTIFDSYRPYAGDIEARDKGSLVAHENGVATPFGIAGAQSRGVMMVSAKDEIYRDMIIGLHQRPGDLRVNICK 552
            SGRGQLHLTVLIENMRREGFELLVGPPTVITKQVDG THEPFETVEVQVPDEYTGAVVDLLSRRKGEMLNM+PVETGGDAQMTNIEYLVPTRGMIGLRN+MLTATRGTAVMDTIFDSYRPYAGDIEARDKGSL+AHENGVATPFGIAGAQSRGVMMVSAKDEIYRDMI+GLHQRPGDLRVNICK
Sbjct:  448 SGRGQLHLTVLIENMRREGFELLVGPPTVITKQVDGSTHEPFETVEVQVPDEYTGAVVDLLSRRKGEMLNMTPVETGGDAQMTNIEYLVPTRGMIGLRNSMLTATRGTAVMDTIFDSYRPYAGDIEARDKGSLIAHENGVATPFGIAGAQSRGVMMVSAKDEIYRDMIVGLHQRPGDLRVNICK 631
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BLAST of mRNA_H-canaliculatus_F_contig1172.1530.1 vs. uniprot
Match: X2KU57_SCYLO (TypA/BipA GTP binding protein n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=X2KU57_SCYLO)

HSP 1 Score: 362 bits (929), Expect = 1.080e-119
Identity = 179/184 (97.28%), Postives = 184/184 (100.00%), Query Frame = 1 
Query:    1 SGRGQLHLTVLIENMRREGFELLVGPPTVITKQVDGKTHEPFETVEVQVPDEYTGAVVDLLSRRKGEMLNMSPVETGGDAQMTNIEYLVPTRGMIGLRNNMLTATRGTAVMDTIFDSYRPYAGDIEARDKGSLVAHENGVATPFGIAGAQSRGVMMVSAKDEIYRDMIIGLHQRPGDLRVNICK 552
            SGRGQLHLTVLIENMRREGFELLVGPPTVITKQVDGKT+EPFETVEVQVPDEYTGAVVDLLSRRKGEMLNMSPVETGGDA+MTN+EYLVPTRGMIGLRN+MLTATRGTAV+DTIFDSYRPYAGDIEARDKGSLVAHENGVATPFGIAGAQSRGVMMVSAKDEIYRDMIIGLHQRPGDLRVNICK
Sbjct:  435 SGRGQLHLTVLIENMRREGFELLVGPPTVITKQVDGKTYEPFETVEVQVPDEYTGAVVDLLSRRKGEMLNMSPVETGGDAKMTNVEYLVPTRGMIGLRNSMLTATRGTAVLDTIFDSYRPYAGDIEARDKGSLVAHENGVATPFGIAGAQSRGVMMVSAKDEIYRDMIIGLHQRPGDLRVNICK 618
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BLAST of mRNA_H-canaliculatus_F_contig1172.1530.1 vs. uniprot
Match: A0A836CE33_9STRA (PBipA, plastid GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE33_9STRA)

HSP 1 Score: 280 bits (717), Expect = 5.750e-88
Identity = 136/184 (73.91%), Postives = 157/184 (85.33%), Query Frame = 1 
Query:    1 SGRGQLHLTVLIENMRREGFELLVGPPTVITKQVDGKTHEPFETVEVQVPDEYTGAVVDLLSRRKGEMLNMSPVETGGDAQMTNIEYLVPTRGMIGLRNNMLTATRGTAVMDTIFDSYRPYAGDIEARDKGSLVAHENGVATPFGIAGAQSRGVMMVSAKDEIYRDMIIGLHQRPGDLRVNICK 552
            SGRGQLHLTVLIENMRREGFELLVGPPTVIT++ +GK  EPFE VEVQVPDEY G+VVDLLSRRKGEM+NM+P  T G+   TN+EY+VPTRGMIGLRN MLT TRGTAVMDTIF+SYR +AG IEARD+GSL+AHE+G  TP G+ GAQ RG +  S KD++Y  MI+G+HQRPGDL VN+CK
Sbjct:  433 SGRGQLHLTVLIENMRREGFELLVGPPTVITRKDNGKLMEPFEKVEVQVPDEYVGSVVDLLSRRKGEMINMAPA-TEGETGFTNVEYVVPTRGMIGLRNQMLTVTRGTAVMDTIFESYREFAGHIEARDRGSLIAHEDGPVTPNGVLGAQDRGSLFCSPKDDVYSGMIVGIHQRPGDLVVNVCK 615
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BLAST of mRNA_H-canaliculatus_F_contig1172.1530.1 vs. uniprot
Match: A0A7S2FAD4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FAD4_9STRA)

HSP 1 Score: 253 bits (645), Expect = 2.430e-80
Identity = 120/184 (65.22%), Postives = 153/184 (83.15%), Query Frame = 1 
Query:    1 SGRGQLHLTVLIENMRREGFELLVGPPTVITKQVDGKTHEPFETVEVQVPDEYTGAVVDLLSRRKGEMLNMSPVETGGDAQMTNIEYLVPTRGMIGLRNNMLTATRGTAVMDTIFDSYRPYAGDIEARDKGSLVAHENGVATPFGIAGAQSRGVMMVSAKDEIYRDMIIGLHQRPGDLRVNICK 552
            SGRGQLHLTVLIENMRREGFEL+VG P+VIT+++DG   EPFE +E  VP+EY G  VDLLSRRKGE+L+M  V   G+  MT ++YL+PTRG++GLRN MLTATRGTA++D++FDSY+P+AGD+E R+KGSL+A ENGV TP G+ GAQ RG + V  + ++Y +MIIG+HQRPGDL+VN+CK
Sbjct:  158 SGRGQLHLTVLIENMRREGFELMVGAPSVITQEIDGVKCEPFEAIECSVPEEYVGGCVDLLSRRKGELLDM--VANPGEG-MTLLKYLLPTRGLLGLRNAMLTATRGTAIVDSVFDSYKPWAGDLETREKGSLLAFENGVVTPHGVTGAQDRGQLFVPPRVDVYENMIIGIHQRPGDLKVNVCK 338
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BLAST of mRNA_H-canaliculatus_F_contig1172.1530.1 vs. uniprot
Match: A0A482SLH6_9ARCH (EFG_C domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SLH6_9ARCH)

HSP 1 Score: 246 bits (628), Expect = 9.410e-78
Identity = 115/183 (62.84%), Postives = 148/183 (80.87%), Query Frame = 1 
Query:    4 GRGQLHLTVLIENMRREGFELLVGPPTVITKQVDGKTHEPFETVEVQVPDEYTGAVVDLLSRRKGEMLNMSPVETGGDAQMTNIEYLVPTRGMIGLRNNMLTATRGTAVMDTIFDSYRPYAGDIEARDKGSLVAHENGVATPFGIAGAQSRGVMMVSAKDEIYRDMIIGLHQRPGDLRVNICK 552
            GRGQLHLTVLIE MRREGFEL++GPPTVI + +DG   EPFE V++ VP+EY  +VVD+L++R+GEM  M P E  G  + T +++LVPTRGMIG+R+ +LTAT+GT V+DTIFDSY+P AG I+ R+KGSL+A E+G   PFGI+ AQ RG + +S KDE+Y+DMIIG+HQRPGDL VN+CK
Sbjct:  154 GRGQLHLTVLIETMRREGFELMIGPPTVIERTIDGVKCEPFELVDITVPNEYASSVVDILNKRRGEMAEMGPAE--GAEESTALKFLVPTRGMIGVRSALLTATKGTVVLDTIFDSYKPIAGVIQQREKGSLLAFEDGACNPFGISNAQDRGRLFISPKDEVYKDMIIGVHQRPGDLHVNVCK 334
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BLAST of mRNA_H-canaliculatus_F_contig1172.1530.1 vs. uniprot
Match: F0XW47_AURAN (Tr-type G domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XW47_AURAN)

HSP 1 Score: 251 bits (641), Expect = 4.640e-77
Identity = 122/184 (66.30%), Postives = 146/184 (79.35%), Query Frame = 1 
Query:    1 SGRGQLHLTVLIENMRREGFELLVGPPTVITKQVDGKTHEPFETVEVQVPDEYTGAVVDLLSRRKGEMLNMSPVETGGDAQMTNIEYLVPTRGMIGLRNNMLTATRGTAVMDTIFDSYRPYAGDIEARDKGSLVAHENGVATPFGIAGAQSRGVMMVSAKDEIYRDMIIGLHQRPGDLRVNICK 552
            SGRG LHLTVLIE MRREGFEL +GPP VI K VDG   EPF+ +E+QVPDEY   VVDLL+RRKGEM +M   ETG     T ++YL+PTR  IGLR NML+ATRGTAV+D+ FDSYRP+AGD+EAR+KGSL+A E+G AT FG+ GAQ RG +  + K  +Y+DMI+G+HQRPGDLRVNICK
Sbjct:  402 SGRGPLHLTVLIETMRREGFELEIGPPEVIIKDVDGVKSEPFDALEIQVPDEYASNVVDLLNRRKGEMTDMGKTETG---DFTYVKYLLPTRSSIGLRTNMLSATRGTAVIDSNFDSYRPFAGDLEAREKGSLLAFEDGEATSFGLTGAQDRGQLFATPKTSVYKDMIVGVHQRPGDLRVNICK 582
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BLAST of mRNA_H-canaliculatus_F_contig1172.1530.1 vs. uniprot
Match: A0A7S3GZA7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GZA7_9STRA)

HSP 1 Score: 243 bits (621), Expect = 1.630e-76
Identity = 119/183 (65.03%), Postives = 147/183 (80.33%), Query Frame = 1 
Query:    4 GRGQLHLTVLIENMRREGFELLVGPPTVITKQVDGKTHEPFETVEVQVPDEYTGAVVDLLSRRKGEMLNMSPVETGGDAQMTNIEYLVPTRGMIGLRNNMLTATRGTAVMDTIFDSYRPYAGDIEARDKGSLVAHENGVATPFGIAGAQSRGVMMVSAKDEIYRDMIIGLHQRPGDLRVNICK 552
            GRGQLHLTVLIENMRREGFELL+GPPTVI K VDG   EPFE VEV VP EY   VVD+L+RRKG+ML M+P E  G   MT + +LVPTRGMIG+R+ +LTAT+GT ++DT FDSY+P  G I  R+KGSL+  E+GV+ P+GIA AQ RG + +++K+EI++DMIIG+HQRPGDL VN+CK
Sbjct:  169 GRGQLHLTVLIENMRREGFELLLGPPTVIEKVVDGVKCEPFEKVEVTVPQEYASNVVDMLNRRKGDMLLMAPCE--GSEGMTLLTFLVPTRGMIGIRSALLTATKGTVILDTQFDSYKPCVGAIAQREKGSLLGTESGVSNPYGIASAQERGRLFINSKEEIFKDMIIGVHQRPGDLHVNVCK 349
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BLAST of mRNA_H-canaliculatus_F_contig1172.1530.1 vs. uniprot
Match: A0A7S4DC59_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DC59_HETAK)

HSP 1 Score: 240 bits (612), Expect = 3.780e-74
Identity = 111/184 (60.33%), Postives = 145/184 (78.80%), Query Frame = 1 
Query:    1 SGRGQLHLTVLIENMRREGFELLVGPPTVITKQVDGKTHEPFETVEVQVPDEYTGAVVDLLSRRKGEMLNMSPVETGGDAQMTNIEYLVPTRGMIGLRNNMLTATRGTAVMDTIFDSYRPYAGDIEARDKGSLVAHENGVATPFGIAGAQSRGVMMVSAKDEIYRDMIIGLHQRPGDLRVNICK 552
            SGRG++HLTVLIE MRREGFELLVGPP+VIT++VDG+  EPFE ++VQV  +  G ++ +L+ RKG++ ++ P    G   MT   +L+PTRGMIGLR+ +LTATRGTAVMD++F SY+PYAG+IE+R+KGSL AH  G  T +G+ GAQ RG + VS KDE+Y  M+IG+HQRPGDL VN+CK
Sbjct:  260 SGRGEMHLTVLIETMRREGFELLVGPPSVITREVDGRRREPFELLDVQVDPDLLGNLISILTSRKGQVAHVEPENGSG---MTEASFLIPTRGMIGLRSQILTATRGTAVMDSVFHSYQPYAGEIESREKGSLTAHSTGTVTTYGVIGAQERGSLFVSPKDEVYEGMVIGIHQRPGDLAVNVCK 440
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BLAST of mRNA_H-canaliculatus_F_contig1172.1530.1 vs. uniprot
Match: A0A4D9D157_9STRA (Tr-type G domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D157_9STRA)

HSP 1 Score: 244 bits (623), Expect = 4.050e-74
Identity = 120/184 (65.22%), Postives = 144/184 (78.26%), Query Frame = 1 
Query:    1 SGRGQLHLTVLIENMRREGFELLVGPPTVITKQVDGKTHEPFETVEVQVPDEYTGAVVDLLSRRKGEMLNMSPVETGGDAQMTNIEYLVPTRGMIGLRNNMLTATRGTAVMDTIFDSYRPYAGDIEARDKGSLVAHENGVATPFGIAGAQSRGVMMVSAKDEIYRDMIIGLHQRPGDLRVNICK 552
            +GRGQ+HLTVLIENMRREGFEL +GPP VI K +DG   EP+E+VEV VPDEY G VVDLL++RKGEML+M      G      +EYLVPTRGMIGLRN MLTATRG AVM++ F SYRP  G+I +RDKGSL+A E G +TPFGI GAQ RG + +  K ++Y DMI+G+HQRPGDL+VN+CK
Sbjct:  436 AGRGQMHLTVLIENMRREGFELWIGPPRVIEKVIDGVKCEPYESVEVTVPDEYMGGVVDLLAKRKGEMLSMGTALEDGAGY---VEYLVPTRGMIGLRNAMLTATRGMAVMESSFHSYRPNCGEISSRDKGSLLAFETGDSTPFGIIGAQDRGQLFIEPKMKVYADMIVGVHQRPGDLKVNVCK 616
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BLAST of mRNA_H-canaliculatus_F_contig1172.1530.1 vs. uniprot
Match: A0A8J2WJI0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WJI0_9STRA)

HSP 1 Score: 239 bits (610), Expect = 1.970e-72
Identity = 119/185 (64.32%), Postives = 144/185 (77.84%), Query Frame = 1 
Query:    1 SGRGQLHLTVLIENMRREGFELLVGPPTVITKQVD-GKTHEPFETVEVQVPDEYTGAVVDLLSRRKGEMLNMSPVETGGDAQMTNIEYLVPTRGMIGLRNNMLTATRGTAVMDTIFDSYRPYAGDIEARDKGSLVAHENGVATPFGIAGAQSRGVMMVSAKDEIYRDMIIGLHQRPGDLRVNICK 552
            SGRG LHLTVLIE MRREGFEL +GPP VI K  D GK  EP++ VEVQVPDEY   VVDLL+RRKGEM +M   + G     T ++YL+PTRG IGLR N+L+ATRGTAV+D+ FDSYR +AGDIEARDKGSL+A E+G AT  G+ GAQ RG +  + K  +Y+DM++G+HQRPGDLRVN+CK
Sbjct:  407 SGRGPLHLTVLIETMRREGFELEIGPPEVIIKTGDDGKKQEPYDAVEVQVPDEYASNVVDLLNRRKGEMQDMGKTDVG---DYTYVKYLLPTRGSIGLRTNLLSATRGTAVIDSNFDSYRAFAGDIEARDKGSLLAFEDGEATSHGLLGAQDRGQLFATPKTAVYKDMVVGVHQRPGDLRVNVCK 588
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1172.1530.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYY6_9PHAE3.830e-12097.28Tr-type G domain-containing protein n=2 Tax=Ectoca... [more]
X2KU57_SCYLO1.080e-11997.28TypA/BipA GTP binding protein n=1 Tax=Scytosiphon ... [more]
A0A836CE33_9STRA5.750e-8873.91PBipA, plastid GTPase n=1 Tax=Tribonema minus TaxI... [more]
A0A7S2FAD4_9STRA2.430e-8065.22Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A482SLH6_9ARCH9.410e-7862.84EFG_C domain-containing protein n=1 Tax=archaeon T... [more]
F0XW47_AURAN4.640e-7766.30Tr-type G domain-containing protein n=1 Tax=Aureoc... [more]
A0A7S3GZA7_9STRA1.630e-7665.03Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S4DC59_HETAK3.780e-7460.33Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9D157_9STRA4.050e-7465.22Tr-type G domain-containing protein n=2 Tax=Monodo... [more]
A0A8J2WJI0_9STRA1.970e-7264.32Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1172contigH-canaliculatus_F_contig1172:12312..13688 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score365.5
Seed ortholog evalue1.4e-98
Seed eggNOG ortholog2880.D7FV09
KEGG koko:K06207
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006414,GO:0006417,GO:0006448,GO:0006518,GO:0006725,GO:0006807,GO:0006950,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009409,GO:0009507,GO:0009536,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016070,GO:0016072,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019222,GO:0019538,GO:0022613,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031647,GO:0032268,GO:0032270,GO:0034248,GO:0034250,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042802,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045727,GO:0045901,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050821,GO:0050896,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990145,GO:2000112
EggNOG free text desc.GTPase activity
EggNOG OGsCOG0481@1,KOG0462@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Hectar predicted targeting categoryother localisation
Exons3
Model size553
Cds size552
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1172.1530.1prot_H-canaliculatus_F_contig1172.1530.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1172 12312..13687 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928867.711225-CDS-H-canaliculatus_F_contig1172:12311..124551622928867.711225-CDS-H-canaliculatus_F_contig1172:12311..12455Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1172 12312..12455 +
1696845595.0600073-CDS-H-canaliculatus_F_contig1172:12311..124551696845595.0600073-CDS-H-canaliculatus_F_contig1172:12311..12455Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1172 12312..12455 +
1622928867.7214594-CDS-H-canaliculatus_F_contig1172:12715..129381622928867.7214594-CDS-H-canaliculatus_F_contig1172:12715..12938Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1172 12716..12938 +
1696845595.0884545-CDS-H-canaliculatus_F_contig1172:12715..129381696845595.0884545-CDS-H-canaliculatus_F_contig1172:12715..12938Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1172 12716..12938 +
1622928867.7304666-CDS-H-canaliculatus_F_contig1172:13502..136871622928867.7304666-CDS-H-canaliculatus_F_contig1172:13502..13687Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1172 13503..13687 +
1696845595.098659-CDS-H-canaliculatus_F_contig1172:13502..136871696845595.098659-CDS-H-canaliculatus_F_contig1172:13502..13687Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1172 13503..13687 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1172.1530.1

>prot_H-canaliculatus_F_contig1172.1530.1 ID=prot_H-canaliculatus_F_contig1172.1530.1|Name=mRNA_H-canaliculatus_F_contig1172.1530.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=184bp
SGRGQLHLTVLIENMRREGFELLVGPPTVITKQVDGKTHEPFETVEVQVP
DEYTGAVVDLLSRRKGEMLNMSPVETGGDAQMTNIEYLVPTRGMIGLRNN
MLTATRGTAVMDTIFDSYRPYAGDIEARDKGSLVAHENGVATPFGIAGAQ
SRGVMMVSAKDEIYRDMIIGLHQRPGDLRVNICK
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mRNA from alignment at H-canaliculatus_F_contig1172:12312..13688+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1172.1530.1 ID=mRNA_H-canaliculatus_F_contig1172.1530.1|Name=mRNA_H-canaliculatus_F_contig1172.1530.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1377bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1172:12312..13688+ (Hapterophycus canaliculatus Oshoro5f female)
AGCGGGCGAGGGCAACTACATCTGACGGTTCTGATTGAGAATATGCGGCG
AGAGGGCTTTGAATTGCTTGTTGGGCCTCCAACAGTTATCACGAAGCAGG
TGGACGGCAAGACTCACGAACCCTTCGAAACGGTGGAGGTTCAGGTTCGT
TTATTTCGAGTCGGGTTGATACGTTTTGTTCTTCGTTGCACGGTTTTGTT
GGCGTGGCCGAACATCGCAACGATGGTGGTCACCTTTTTAGTCCCGGGTC
AAGAAGAGAAATCGGCCACCCCTGACTTGTCTGCAAGTACGAGACTCTGC
CCCATCCAAATGTGCACGTACTCCGCAGCAGTACTGGAGAAGCAATAGTC
GTGAGTGACATCCAACCTTCTCTTGTTTCGGTTCGCTAACCCTGCGGTCG
ACAGGTGCCTGACGAATACACCGGTGCAGTAGTGGACTTGCTTTCACGTC
GGAAGGGGGAAATGCTCAACATGTCGCCTGTCGAGACCGGAGGCGATGCC
CAGATGACGAATATCGAATATCTCGTGCCTACGCGTGGTATGATCGGTCT
TCGCAACAACATGCTGACTGCGACGCGCGGCACGGCAGTTATGGACACGA
TATTTGACTCGTACAGGCCATACGCAGGTACGTTTGCAAGCAGGGTCCCC
GGTATATGGCGTTAACTTTCGTGGTGGCCCAACAGTCGATTCAATTCATT
TCCGCCTGGGCACTCTGAAATACTTTTGAACGAGTGCTATCTGGCGTATG
CACATCCCACAAAATGATGGTAGCTCATGTGGCGCCCTGTGTTGCCACTT
CCCGCCCCAAAACCGATTTCATGTCGTTGGAGTCGAACCGGGCGGGTTTT
CTCGACAGGCTCTGTCCGAATACACATGTTCGACACTGCATGGTTTCTTG
GTACTCAGGAATAAGTTTGGCGCCGAGGGTTCTGGTTGATCCCGGGCCGT
TCATCATCGCGATCGAACGCAAATTACGCTAGAGAGGCGCGCTTTACGCG
TTGGGATGCCATCGTCACCGATGAAAGTTTACACGGAAAATTGTGTCGGT
GGAGGCAGACCTCGGCCAGTCTTGCGCTTGGTCGTTTCAACTCAACGGCC
TGTACCGCCGTCTCTTCGACCGACCGTCTCCCGGTGTCAACAACCGGGAG
GCTACAGCTTTCACATTTTTCTCGACCTTCCACGTTTACAGGTGATATCG
AAGCCCGAGACAAGGGATCTCTGGTTGCCCACGAAAATGGCGTCGCTACG
CCGTTTGGGATCGCCGGAGCTCAAAGCCGTGGTGTAATGATGGTCTCAGC
GAAGGATGAGATCTACCGCGACATGATCATTGGCTTGCATCAGCGCCCAG
GAGATCTAAGGGTCAACATCTGTAAGG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1172:12312..13688+

>mRNA_H-canaliculatus_F_contig1172.1530.1 ID=mRNA_H-canaliculatus_F_contig1172.1530.1|Name=mRNA_H-canaliculatus_F_contig1172.1530.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1104bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1172:12312..13688+ (Hapterophycus canaliculatus Oshoro5f female)
AGCGGGCGAGGGCAACTACATCTGACGGTTCTGATTGAGAATATGCGGCG
AGAGGGCTTTGAATTGCTTGTTGGGCCTCCAACAGTTATCACGAAGCAGG
TGGACGGCAAGACTCACGAACCCTTCGAAACGGTGGAGGTTCAGAGCGGG
CGAGGGCAACTACATCTGACGGTTCTGATTGAGAATATGCGGCGAGAGGG
CTTTGAATTGCTTGTTGGGCCTCCAACAGTTATCACGAAGCAGGTGGACG
GCAAGACTCACGAACCCTTCGAAACGGTGGAGGTTCAGGTGCCTGACGAA
TACACCGGTGCAGTAGTGGACTTGCTTTCACGTCGGAAGGGGGAAATGCT
CAACATGTCGCCTGTCGAGACCGGAGGCGATGCCCAGATGACGAATATCG
AATATCTCGTGCCTACGCGTGGTATGATCGGTCTTCGCAACAACATGCTG
ACTGCGACGCGCGGCACGGCAGTTATGGACACGATATTTGACTCGTACAG
GCCATACGCAGGTGCCTGACGAATACACCGGTGCAGTAGTGGACTTGCTT
TCACGTCGGAAGGGGGAAATGCTCAACATGTCGCCTGTCGAGACCGGAGG
CGATGCCCAGATGACGAATATCGAATATCTCGTGCCTACGCGTGGTATGA
TCGGTCTTCGCAACAACATGCTGACTGCGACGCGCGGCACGGCAGTTATG
GACACGATATTTGACTCGTACAGGCCATACGCAGGTGATATCGAAGCCCG
AGACAAGGGATCTCTGGTTGCCCACGAAAATGGCGTCGCTACGCCGTTTG
GGATCGCCGGAGCTCAAAGCCGTGGTGTAATGATGGTCTCAGCGAAGGAT
GAGATCTACCGCGACATGATCATTGGCTTGCATCAGCGCCCAGGAGATCT
AAGGGTCAACATCTGTAAGGTGATATCGAAGCCCGAGACAAGGGATCTCT
GGTTGCCCACGAAAATGGCGTCGCTACGCCGTTTGGGATCGCCGGAGCTC
AAAGCCGTGGTGTAATGATGGTCTCAGCGAAGGATGAGATCTACCGCGAC
ATGATCATTGGCTTGCATCAGCGCCCAGGAGATCTAAGGGTCAACATCTG
TAAG
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