mRNA_H-canaliculatus_F_contig11713.1527.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig11713.1527.1 vs. uniprot
Match: A0A6H5K6A8_9PHAE (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6A8_9PHAE) HSP 1 Score: 384 bits (985), Expect = 2.750e-131 Identity = 197/286 (68.88%), Postives = 226/286 (79.02%), Query Frame = 1 Query: 1 QVFLIDATPNLRSQLWYIQH---EGGRTVPLKLGGILLTHAHTGHYTGLLQLGKEEADMRDVPVFCTPSMASFLLNNQPWAQLTERGNIVIRELGVNTTVGD-DAFPVALTPSLSFKPVSVPHRAELSDTVAYVVNLSVRGGGSPSSVAAISTTSDLHAPDTMSSCKK-TMTFLYCPDTDRWSDWTRSIKSWCSEVDVALLDATFYSKGELKGRDMSEVSHPIAQDTMAELAGCRAEVVFIHLNHTNPLITADSPERARAIAAGFKVGTFGMEWVMPPETPTNHSA 843 +VFLIDATP+LR QLWYIQH +G PL+LGGILLTHAH GHYTGLLQLGKEEADMR VPVFCTPSMASFL +NQPW QLT+RGNI I+EL ++ T DA PV LT SLS PV VPHRAELSDTVAYVV+++ R + + + + DL P +SS + TM LYCPDTD WSDW RSI SWC+EVDVALLDATF+ KGELKGRDMSEVSHPIA +TMA+LAGC+AEVV IHLNHTNPL+TADSPERA+A+AAG+KVG+FGMEW +TP A Sbjct: 35 KVFLIDATPDLREQLWYIQHPKRKGDSGRPLELGGILLTHAHIGHYTGLLQLGKEEADMRGVPVFCTPSMASFLRSNQPWRQLTDRGNIAIQELDMDATDNSKDAVPVQLTRSLSVLPVPVPHRAELSDTVAYVVSVASRAVDASDTAVSHAPKLDLGPPAEVSSGENDTMKLLYCPDTDGWSDWKRSISSWCNEVDVALLDATFHGKGELKGRDMSEVSHPIATETMAQLAGCKAEVVLIHLNHTNPLLTADSPERAQAVAAGYKVGSFGMEWAPTLKTPAGSRA 320
BLAST of mRNA_H-canaliculatus_F_contig11713.1527.1 vs. uniprot
Match: D7FQF9_ECTSI (Coenzyme PQQ synthesis protein B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQF9_ECTSI) HSP 1 Score: 299 bits (765), Expect = 3.110e-99 Identity = 151/228 (66.23%), Postives = 179/228 (78.51%), Query Frame = 1 Query: 166 MRDVPVFCTPSMASFLLNNQPWAQLTERGNIVIRELGVNTTVGD-DAFPVALTPSLSFKPVSVPHRAELSDTVAYVVNLSVRGGGSPSSVAAISTTSDLHAPDTMSSCKK-TMTFLYCPDTDRWSDWTRSIKSWCSEVDVALLDATFYSKGELKGRDMSEVSHPIAQDTMAELAGCRAEVVFIHLNHTNPLITADSPERARAIAAGFKVGTFGMEWVMPPETPTNHSA 843 MR VPVFCTPSMASFL +NQPW QLT+RGNI I+EL ++ T DA PV LT SLS PV VPHRAELSDT+AYVV+++ R + + + ++ DL P +SS + TM LYCPDTD WSDW R+I SWC+EVDVALLDATF+ KGELKGRDMSEVSHPIA +TMA+LAGC+AEVV IHLNHTNPL+TADSPERA+A+AAG+KVG+FGMEW ETP + A Sbjct: 1 MRGVPVFCTPSMASFLRSNQPWRQLTDRGNITIQELDIDATDNSKDAVPVQLTRSLSVLPVPVPHRAELSDTIAYVVSVASRAVDASGTAVSHTSKLDLGPPAEVSSGENDTMKLLYCPDTDGWSDWKRNISSWCNEVDVALLDATFHGKGELKGRDMSEVSHPIATETMAQLAGCKAEVVLIHLNHTNPLLTADSPERAQAVAAGYKVGSFGMEWAPTLETPADSRA 228
BLAST of mRNA_H-canaliculatus_F_contig11713.1527.1 vs. uniprot
Match: A0A835Z5U1_9STRA (Pyrroloquinoline quinone biosynthesis protein PqqB n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5U1_9STRA) HSP 1 Score: 226 bits (575), Expect = 8.590e-69 Identity = 125/276 (45.29%), Postives = 159/276 (57.61%), Query Frame = 1 Query: 1 QVFLIDATPNLRSQLWYIQ-----HEGGRTVPLKLGGILLTHAHTGHYTGLLQLGKEEADMRDVPVFCTPSMASFLLNNQPWAQLTERGNIVIRELGVNTTVGDDAFPVALTPSLSFKPVSVPHRAELSDTVAYVVNLSVRGGGSPSSVAAISTTSDLHAPDTMSSCKKTMTFLYCPDTDRWSD-WTRSIKSWCSEVDVALLDATFYSKGELK-GRDMSEVSHPIAQDTMAELAGCRAEVVFIHLNHTNPLITADSPERARAIAAGFKVGTFGMEW 807 + FL+DATP++ SQLW +Q ++G V LGGILLTHAH GHY+GLLQLGKE VPVFCT SMA+FL N PW+ L E +IVI EL + L L P+SVPHR E+SDTVA + SC LYCPDT+ W + W + I++WC EV+VA++D TFYS EL GR ++++ HP+ DT+A L+GC A+VVF HLNHTNP+ TA S +R AG V FGM+W Sbjct: 61 KAFLVDATPDIGSQLWELQQAIPANDGPGNV---LGGILLTHAHMGHYSGLLQLGKEALGAAQVPVFCTASMAAFLHENLPWSLLVEGNSIVITELTPGSAY-------RLCTGLCVTPISVPHRDEISDTVAMLF-----------------------------SCGDQSKLLYCPDTNGWGEGWGKGIRAWCDEVEVAVVDGTFYSADELPAGRSIADIPHPLIPDTVARLSGCSAQVVFTHLNHTNPVATAASEQRRSVTDAGMSVAEFGMQW 297
BLAST of mRNA_H-canaliculatus_F_contig11713.1527.1 vs. uniprot
Match: A0A524ARI4_9CHLR (Pyrroloquinoline quinone biosynthesis protein PqqB n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=A0A524ARI4_9CHLR) HSP 1 Score: 201 bits (510), Expect = 6.540e-60 Identity = 121/271 (44.65%), Postives = 148/271 (54.61%), Query Frame = 1 Query: 1 QVFLIDATPNLRSQLWYIQHEGGRTVPLKLGGILLTHAHTGHYTGLLQLGKEEADMRDVPVFCTPSMASFLLNNQPWAQLTERGNIVIRELGVNTTVGDDAFPVALTPSLSFKPVSVPHRAELSDTVAYVVNLSVRGGGSPSSVAAISTTSDLHAPDTMSSCKKTMTFLYCPDTDRWSDWTRSIKSWCSEVDVALLDATFYSKGELKGRDMSEVSHPIAQDTMAELAGCRAEVVFIHLNHTNPLITADSPERARAIAAGFKVGTFGMEWVM 813 Q +LIDATP+ R QL + H PL GI+LTHAH GHYTGL+ LG+E RD+PV+ T +ASFL ++ PW+QL GNI +R L T G D L+P L PV VPHR ELSDT+A VV H P YCPD D W W +++ + + +DVALLDATF+S EL GRD+SE+ HP A DT LA +V IHLNHTNPL+ A PER A VG FG WV+ Sbjct: 51 QSWLIDATPDFREQL-HALHNLAPDCPL--AGIVLTHAHMGHYTGLIHLGREAMCTRDLPVYATLRLASFLHDSAPWSQLVALGNIELRLL----TPGTDT---QLSPDLHLTPVLVPHRDELSDTLALVV----------------------HGP--------ARRLFYCPDIDAWDKWEHNLRDFVAGMDVALLDATFFSHDELPGRDLSEIPHPSAIDTAERLAKVDCDVRLIHLNHTNPLL-APGPERDWLAAQEISVGAFGARWVL 280
BLAST of mRNA_H-canaliculatus_F_contig11713.1527.1 vs. uniprot
Match: A0A4R6Y2H1_9GAMM (Pyrroloquinoline quinone biosynthesis protein B n=2 Tax=Marinicella litoralis TaxID=644220 RepID=A0A4R6Y2H1_9GAMM) HSP 1 Score: 192 bits (488), Expect = 4.990e-56 Identity = 106/272 (38.97%), Postives = 150/272 (55.15%), Query Frame = 1 Query: 1 QVFLIDATPNLRSQLWYIQHEGGRTVPLKLGGILLTHAHTGHYTGLLQLGKEEADMRDVPVFCTPSMASFLLNNQPWAQLTERGNIVIRELGVNTTVGDDAFPVALTPSLSFKPVSVPHRAELSDTVAYVVNLSVRGGGSPSSVAAISTTSDLHAPDTMSSCKKTMTFLYCPDTDRWSDWTRSIKSWCSEVDVALLDATFYSKGELKGRDMSEVSHPIAQDTMAELAGC----RAEVVFIHLNHTNPLITADSPERARAIAAGFKVGTFGME 804 Q +L++ATP++R Q+ + H+ L GI LTH H GHYTGL+ +G E A M++ PV+ P +L NN PW+QL + NIV+++L D V L P+LS KP+ VPHR E ++TVAYV+ G SV L+ PD D+W W + IK+ S+VD A LDATF++ GE+ RDM+E+ HP ++++ L +A+V+FIH NHTNPL+ DS + A GFKV GM+ Sbjct: 92 QKYLLEATPDIREQMHQL-HQVAPDGLYNLAGIFLTHGHMGHYTGLMHMGHEAAGMKNTPVYVMPRFKKYLQNNGPWSQLVDYKNIVLQDL-------HDQSTVQLNPNLSIKPMLVPHRDEYTETVAYVIK------GPRKSV------------------------LFIPDIDKWQKWNKDIKAEISQVDYAFLDATFFANGEIPNRDMAEIPHPFVEESLQLLKDLSPKDKAKVIFIHFNHTNPLLNHDSEASEQVKAHGFKVAYRGMK 325
BLAST of mRNA_H-canaliculatus_F_contig11713.1527.1 vs. uniprot
Match: UPI002014F72B (MBL fold metallo-hydrolase n=2 Tax=Shewanella TaxID=22 RepID=UPI002014F72B) HSP 1 Score: 189 bits (479), Expect = 2.960e-55 Identity = 106/269 (39.41%), Postives = 143/269 (53.16%), Query Frame = 1 Query: 7 FLIDATPNLRSQLWYIQHEGGRTVPLKLGGILLTHAHTGHYTGLLQLGKEEADMRDVPVFCTPSMASFLLNNQPWAQLTERGNIVIRELGVNTTVGDDAFPVALTPSLSFKPVSVPHRAELSDTVAYVVNLSVRGGGSPSSVAAISTTSDLHAPDTMSSCKKTMTFLYCPDTDRWSDWTRSIKSWCSEVDVALLDATFYSKGELKGRDMSEVSHPIAQDTMAELAGCRAE----VVFIHLNHTNPLITADSPERARAIAAGFKVGTFGM 801 +L +ATP+L QL+ +Q E +L G+ LTHAH GHYTGL+ G+E A + +PV+ P M SFL NN PW+QL + NI ++EL V + ++ PV VPHR E S+TV Y++ KT T L+ PD D+W W +I+ +VD ALLDATFYS ELKGR M+EV HP+ ++M E V+FIHLNHTNPL+ + SPE AGF+V + G+ Sbjct: 48 YLFEATPDLPQQLYLLQQEWSNP-DYQLQGVFLTHAHMGHYTGLMHFGRESASTKQLPVYAMPQMRSFLENNGPWSQLVKLNNIELKELQNKREV--------VLGNVRVTPVLVPHRDEFSETVGYLIK------------------------------GKTKTALFIPDIDKWEKWDTAIEELIPQVDYALLDATFYSADELKGRTMAEVPHPLVVESMNRFRELPPEQKRKVIFIHLNHTNPLLDSSSPESLAVTDAGFRVASEGL 277
BLAST of mRNA_H-canaliculatus_F_contig11713.1527.1 vs. uniprot
Match: A0A2V7XRA8_9BACT (Pyrroloquinoline quinone biosynthesis protein PqqB n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7XRA8_9BACT) HSP 1 Score: 190 bits (482), Expect = 3.160e-55 Identity = 118/275 (42.91%), Postives = 144/275 (52.36%), Query Frame = 1 Query: 1 QVFLIDATPNLRSQLWYIQHEGGRTVPLK-LGGILLTHAHTGHYTGLLQLGKEEADMRDVPVFCTPSMASFLLNNQPWAQLTERGNIVIRELGVNTTVGDDAFPVALTPSLSFKPVSVPHRAELSDTVAYVVNLSVRGGGSPSSVAAISTTSDLHAPDTMSSCKKTMTFLYCPDTDRWSDWTRSIKSWCSEVDVALLDATFYSKGELKGRDMSEVSHPIAQDTMAELAGCRAEVVFIHLNHTNPLITADSPERARAIAAGFKVGTFGMEWVMPPE 822 Q FLIDATP++ SQL + P + + GILLTHAH GHYTGL+ G+E VPV+ T MA+FL N PW+QL G I +RE+ + LTPSL+F PV VPHR ELSDTV YVV RG T LY PD D+W W R ++ + V ALLD TF+S EL GR + EV HP+ +T A L + VVFIHLNHTNPL+ D R GF V T G+ V+P E Sbjct: 83 QRFLIDATPDMASQLESLNTGRALADPRRPVDGILLTHAHIGHYTGLMYFGREALGAHAVPVYTTTHMAAFLRANGPWSQLVALGQIELREI-------EPGRETVLTPSLAFTPVRVPHRDELSDTVGYVV----RG--------------------------PTGALLYVPDIDKWEKWDRRVEGEVARVGTALLDGTFFSADELPGRSIDEVPHPLVSETAARLGELSSRVVFIHLNHTNPLLWDDRLRRDLR-GRGFTVATDGL--VIPLE 317
BLAST of mRNA_H-canaliculatus_F_contig11713.1527.1 vs. uniprot
Match: A0A1Q3T670_9SPHI (Pyrroloquinoline quinone biosynthesis protein PqqB n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A1Q3T670_9SPHI) HSP 1 Score: 188 bits (477), Expect = 2.030e-54 Identity = 109/271 (40.22%), Postives = 141/271 (52.03%), Query Frame = 1 Query: 1 QVFLIDATPNLRSQLWYIQHEGGRTVPLKLGGILLTHAHTGHYTGLLQLGKEEADMRDVPVFCTPSMASFLLNNQPWAQLTERGNIVIRELGVNTTVGDDAFPVALTPSLSFKPVSVPHRAELSDTVAYVVNLSVRGGGSPSSVAAISTTSDLHAPDTMSSCKKTMTFLYCPDTDRWSDWTRSIKSWCSEVDVALLDATFYSKGELKGRDMSEVSHPIAQDTMAELAGC----RAEVVFIHLNHTNPLITADSPERARAIAAGFKVGTFGM 801 Q +L +ATP++ +Q +Q GI THAH GHY GLLQLG+E R VPV+ P M SFL N PW+QL E NI + L ++++ L+PSL KP+ VPHR E S+TV +++ S KK L+ PD D+W W R+I S+VD+A LD TFY GEL GRDM EV HP +++M AG R+++VFIH NHTNPL S E+ A GFKV GM Sbjct: 88 QYWLFEATPDITTQFHSVQQYLSSQAGHIPAGIFTTHAHIGHYAGLLQLGREAMGARSVPVWTMPRMDSFLRYNAPWSQLVELKNIQLNALKEDSSI-------TLSPSLKVKPLVVPHRDEFSETVGFIIE---------------------------SVGKK---ILFIPDIDKWEKWDRNINEEVSKVDIAFLDGTFYKNGELPGRDMKEVPHPFVEESMQLFAGLPDTVRSKIVFIHFNHTNPLRKKGSSEKEEVSAKGFKVAEEGM 321
BLAST of mRNA_H-canaliculatus_F_contig11713.1527.1 vs. uniprot
Match: A0A0R2SXS5_9GAMM (Pyrroloquinoline quinone biosynthesis protein PqqB n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A0R2SXS5_9GAMM) HSP 1 Score: 186 bits (473), Expect = 6.460e-54 Identity = 105/269 (39.03%), Postives = 145/269 (53.90%), Query Frame = 1 Query: 7 FLIDATPNLRSQLWYIQHEGGRTVPLKLGGILLTHAHTGHYTGLLQLGKEEADMRDVPVFCTPSMASFLLNNQPWAQLTERGNIVIRELGVNTTVGDDAFPVALTPSLSFKPVSVPHRAELSDTVAYVVNLSVRGGGSPSSVAAISTTSDLHAPDTMSSCKKTMTFLYCPDTDRWSDWTRSIKSWCSEVDVALLDATFYSKGELKGRDMSEVSHPIAQDTMAELAGC----RAEVVFIHLNHTNPLITADSPERARAIAAGFKVGTFGM 801 +L +ATP+L QL+ +Q E T L G+ LTHAH GHY GL+ G+E + + +PV+ P M+++L NN PW+QL N+ + LG N PVALT +LS P+ VPHR E S+TV Y + P+ A L+ PD ++W+DW I + VD ALLDATF++ GEL RDMS++ HP ++MA + R +V FIH NHTNPL+ SPE R I AG+ + T G+ Sbjct: 83 YLFEATPHLPEQLYALQKEAP-TTRTGLDGVFLTHAHIGHYAGLMHFGREAMNAQGLPVYAMPVMSAYLRNNGPWSQLVALNNVALMPLGDNR-------PVALTTALSVTPMLVPHRDEFSETVGYRIE-------GPNKSA-----------------------LFIPDINKWADWDTDIAALLKTVDYALLDATFFADGELGNRDMSQIPHPFVAESMALFSVLPTEERDKVWFIHFNHTNPLLDLKSPESLRVIGAGYHIATEGL 313
BLAST of mRNA_H-canaliculatus_F_contig11713.1527.1 vs. uniprot
Match: A0A520V9T6_9FLAO (MBL fold metallo-hydrolase n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A520V9T6_9FLAO) HSP 1 Score: 186 bits (473), Expect = 7.610e-54 Identity = 104/265 (39.25%), Postives = 146/265 (55.09%), Query Frame = 1 Query: 7 FLIDATPNLRSQLWYIQHEGGRTVPLKLGGILLTHAHTGHYTGLLQLGKEEADMRDVPVFCTPSMASFLLNNQPWAQLTERGNIVIRELGVNTTVGDDAFPVALTPSLSFKPVSVPHRAELSDTVAYVVNLSVRGGGSPSSVAAISTTSDLHAPDTMSSCKKTMTFLYCPDTDRWSDWTRSIKSWCSEVDVALLDATFYSKGELKGRDMSEVSHPIAQDTMAELAGC----RAEVVFIHLNHTNPLITADSPERARAIAAGFKVG 789 +L DATP++ +QL+ +++ + + GI LTHAH GHYTGL+ LGKE A+ +++PVF P M+SF+ NN PW+QL + NI ++ L N + AL+PSL P VPHR E S+TV Y + PD KK L+ PD D+W+ W + + +VD A LDATFYS EL RDMS++ HP +T+ L RA+V+F H NHTNPL+ + S + +A GFK+G Sbjct: 88 YLFDATPDIGAQLYALKNASKISPSSIVDGIFLTHAHIGHYTGLMYLGKEAANTKNIPVFAMPKMSSFISNNGPWSQLVAQRNIALQPLVANQAI-------ALSPSLHVTPFLVPHRDEYSETVGYFIE----------------------GPD-----KKA---LFIPDIDKWNRWELDLATELQQVDYAFLDATFYSAEELGNRDMSQIPHPSVLETIQTLKDFSRAQRAKVIFTHFNHTNPLLDSTSEATKKVLALGFKIG 315 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig11713.1527.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig11713.1527.1 >prot_H-canaliculatus_F_contig11713.1527.1 ID=prot_H-canaliculatus_F_contig11713.1527.1|Name=mRNA_H-canaliculatus_F_contig11713.1527.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=282bp QVFLIDATPNLRSQLWYIQHEGGRTVPLKLGGILLTHAHTGHYTGLLQLGback to top mRNA from alignment at H-canaliculatus_F_contig11713:156..2204+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig11713.1527.1 ID=mRNA_H-canaliculatus_F_contig11713.1527.1|Name=mRNA_H-canaliculatus_F_contig11713.1527.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2049bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11713:156..2204+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig11713:156..2204+ >mRNA_H-canaliculatus_F_contig11713.1527.1 ID=mRNA_H-canaliculatus_F_contig11713.1527.1|Name=mRNA_H-canaliculatus_F_contig11713.1527.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1692bp|location=Sequence derived from alignment at H-canaliculatus_F_contig11713:156..2204+ (Hapterophycus canaliculatus Oshoro5f female)back to top |